View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11142_low_57 (Length: 250)
Name: NF11142_low_57
Description: NF11142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11142_low_57 |
 |  |
|
| [»] scaffold0065 (2 HSPs) |
 |  |  |
|
Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 13 - 231
Target Start/End: Original strand, 2711219 - 2711437
Alignment:
| Q |
13 |
gagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaa |
112 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2711219 |
gagacacatacccacatactcttttcaaacaaattttgcacttgatcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaa |
2711318 |
T |
 |
| Q |
113 |
caatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattctaa |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2711319 |
caatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattctaa |
2711418 |
T |
 |
| Q |
213 |
cacaaaagaactactttcc |
231 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
2711419 |
cacaaaagaactactttcc |
2711437 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 3170201 - 3170414
Alignment:
| Q |
11 |
cagagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
110 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3170201 |
cagagacacatacccacatcctcttttcaaaagactttgttacttgagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
3170300 |
T |
 |
| Q |
111 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattct |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
3170301 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttatgatcttctttttatcatcttctcttccaatgatctctgattct |
3170400 |
T |
 |
| Q |
211 |
aacacaaaagaact |
224 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3170401 |
aacacaaaagaact |
3170414 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 2989517 - 2989309
Alignment:
| Q |
13 |
gagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaa |
112 |
Q |
| |
|
|||||||||||||||| | |||||||||| |||||| ||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2989517 |
gagacacatacccacatatgcttttcaaacaaatttttcacttcaccatctttgtataccagttgagcaagagctgtctttcccaaaccaccaataccaa |
2989418 |
T |
 |
| Q |
113 |
caatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattctaa |
212 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| | |||| ||| |||||||||||||| ||||| |||||||| |
|
|
| T |
2989417 |
caatagcaaccaatgagacattctgatgttcatgtgattgcctcaacaagcttataatcgtgttttgatcttcttctcttccaatgatctcagattctaa |
2989318 |
T |
 |
| Q |
213 |
cacaaaaga |
221 |
Q |
| |
|
|||| |||| |
|
|
| T |
2989317 |
cacataaga |
2989309 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 11 - 223
Target Start/End: Complemental strand, 2980411 - 2980199
Alignment:
| Q |
11 |
cagagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
110 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
2980411 |
cagagacacatacccacattctcttttcaaacaaattctgcacttcttcatcgttgtataccaattgagcaagagccgtctttcccaaaccaccaatacc |
2980312 |
T |
 |
| Q |
111 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattct |
210 |
Q |
| |
|
|||||||||||||| || || | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | ||||||| |
|
|
| T |
2980311 |
aacaatagcaaccacagaaacttgttgattttcatgtgattgcctcaacaagcttataatcttgtttttatcatcttctcttccaatgatatttgattct |
2980212 |
T |
 |
| Q |
211 |
aacacaaaagaac |
223 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
2980211 |
aacacataagaac |
2980199 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 11 - 224
Target Start/End: Original strand, 3142097 - 3142310
Alignment:
| Q |
11 |
cagagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
110 |
Q |
| |
|
|||||||||| ||||||| || ||||||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
3142097 |
cagagacacaaacccacatacacttttcaaaataatttgttacttcaccatcattgtataccaattgagaaagagctgtctttcccaaaccaccaatccc |
3142196 |
T |
 |
| Q |
111 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattct |
210 |
Q |
| |
|
|||||||||||||| |||||| ||||||||||||||||||||||||| ||||| ||| | ||||||||||| ||||||||||| || ||||| ||| |
|
|
| T |
3142197 |
aacaatagcaaccacagagacacgttgattttcatgtgattgcctcaacatgcttacaatgtcatttttatcatcatctcttccaatgatatctgactct |
3142296 |
T |
 |
| Q |
211 |
aacacaaaagaact |
224 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
3142297 |
aacacaaaagaact |
3142310 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 11 - 231
Target Start/End: Complemental strand, 3002504 - 3002284
Alignment:
| Q |
11 |
cagagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
110 |
Q |
| |
|
|||||||||||||||||| ||| |||||||| ||||||||||||| ||||||| |||||||| |||||||||| ||||||||| ||||||||||| || |
|
|
| T |
3002504 |
cagagacacatacccacatacttatttcaaacaaattttgcacttctccatcattatataccaactgagcaagagttgtctttcctaaaccaccaatccc |
3002405 |
T |
 |
| Q |
111 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattct |
210 |
Q |
| |
|
||||||||||| |||||||||||| || ||| |||||| ||| ||||| | | |||||||| ||||||||| |||||||||||||| || || |||||| |
|
|
| T |
3002404 |
aacaatagcaatcaaggagacattttggtttccatgtggttgtctcaaaaggtgtataatctcctttttatcgtcttctcttccaatgatatccgattct |
3002305 |
T |
 |
| Q |
211 |
aacacaaaagaactactttcc |
231 |
Q |
| |
|
||||| ||||||||| ||||| |
|
|
| T |
3002304 |
aacaccaaagaactagtttcc |
3002284 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 9851031 - 9851245
Alignment:
| Q |
11 |
cagagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
110 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||||| |||||| ||| || | || ||||||||||| |||||||||||||||||||| || |
|
|
| T |
9851031 |
cagagacacatacccacatcctcttttcaaacaaatttttcacttccatgtcacaataaatcatttgagcaagagttgtctttcccaaaccaccaaatcc |
9851130 |
T |
 |
| Q |
111 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattct |
210 |
Q |
| |
|
||||| ||||| ||| |||||||| ||||||||||||| ||| ||||||||||||||||||||| |||||||||||||||||||||| || || ||||| |
|
|
| T |
9851131 |
aacaacagcaatcaaagagacattttgattttcatgtggttgtctcaacaagcttataatcttcattttatcatcttctcttccaatgatatccgattcc |
9851230 |
T |
 |
| Q |
211 |
aacacaaaagaacta |
225 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
9851231 |
aacacaaaagaacta |
9851245 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 11 - 221
Target Start/End: Original strand, 2916062 - 2916272
Alignment:
| Q |
11 |
cagagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
110 |
Q |
| |
|
|||| ||||||||||| | ||||||||||| ||||||||||| ||||||| ||||||| |||||||||||||||||| || ||||| |||||||| |
|
|
| T |
2916062 |
cagacacacatacccatatcttcttttcaaactttttttgcacttccccatcattatataccagttgagcaagagctgtcttacctaaaccgccaatacc |
2916161 |
T |
 |
| Q |
111 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattct |
210 |
Q |
| |
|
|||||| |||| |||||||||||| || ||| ||||| ||||||||| || ||| ||||| ||||||| ||||||||| ||||| || ||||||||| |
|
|
| T |
2916162 |
aacaatggcaatcaaggagacattgtggtttctatgtggttgcctcaataaatttacaatctcttttttattatcttctctaccaatgatatctgattct |
2916261 |
T |
 |
| Q |
211 |
aacacaaaaga |
221 |
Q |
| |
|
|| |||||||| |
|
|
| T |
2916262 |
aatacaaaaga |
2916272 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 45 - 130
Target Start/End: Original strand, 3173800 - 3173885
Alignment:
| Q |
45 |
attttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaacaatagcaaccaaggaga |
130 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||||||| ||||| |
|
|
| T |
3173800 |
attttgcacttctccatcattgtataccaattgagcaagagctgtcttccccaaaccaccaattccaactattgcaaccagggaga |
3173885 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 2911153 - 2911224
Alignment:
| Q |
60 |
atcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaacaatagcaaccaaggagac |
131 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| | ||||||||| |
|
|
| T |
2911153 |
atcattgtataccaactgagcaagagctgtcttgcctaaaccaccaataccaacaatagctatcaaggagac |
2911224 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 3282582 - 3282639
Alignment:
| Q |
164 |
ttataatcttctttttatcatcttctcttccaataatctctgattctaacacaaaaga |
221 |
Q |
| |
|
||||||||| |||||||||||||||||||||| | || | ||||||||||| |||||| |
|
|
| T |
3282582 |
ttataatctcctttttatcatcttctcttccattgatatttgattctaacaaaaaaga |
3282639 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Complemental strand, 13791312 - 13791255
Alignment:
| Q |
164 |
ttataatcttctttttatcatcttctcttccaataatctctgattctaacacaaaaga |
221 |
Q |
| |
|
||||||||| ||||||||||||||||||||| || || | ||||||||||| |||||| |
|
|
| T |
13791312 |
ttataatctcctttttatcatcttctcttcccatgatgtttgattctaacaaaaaaga |
13791255 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 13791454 - 13791349
Alignment:
| Q |
16 |
acacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaacaa |
115 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||| ||||||| ||||| ||| ||||||||| |||||| || | ||| |||||||| |||| |
|
|
| T |
13791454 |
acacatacccacattttcttttcaaaatgcttttgcacttccacatcattatatacgaatcgagcaagagttgtcttgccaatacctccaatacctacaa |
13791355 |
T |
 |
| Q |
116 |
tagcaa |
121 |
Q |
| |
|
|| ||| |
|
|
| T |
13791354 |
taacaa |
13791349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 149; Significance: 8e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 13 - 221
Target Start/End: Complemental strand, 18355917 - 18355709
Alignment:
| Q |
13 |
gagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaa |
112 |
Q |
| |
|
|||||||||||||||| | |||||||||| |||||| ||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18355917 |
gagacacatacccacatatgcttttcaaacaaatttttcacttcaccatctttgtataccagttgagcaagagctgtctttcccaaaccaccaataccaa |
18355818 |
T |
 |
| Q |
113 |
caatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattctaa |
212 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |||||||| |
|
|
| T |
18355817 |
caatagcaaccaatgagacattctgatgttcatgtgattgcctcaacaagcttataatcttgtttttatcttcttctcttccaatgatctcagattctaa |
18355718 |
T |
 |
| Q |
213 |
cacaaaaga |
221 |
Q |
| |
|
|||| |||| |
|
|
| T |
18355717 |
cacataaga |
18355709 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 11 - 231
Target Start/End: Original strand, 10755591 - 10755811
Alignment:
| Q |
11 |
cagagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
110 |
Q |
| |
|
|||||||||||||||||| |||||| |||||| ||| ||||||||| ||| ||||||||||||||||||||||| ||||| || |||||||||||||| |
|
|
| T |
10755591 |
cagagacacatacccacatactcttctcaaacaaatcttgcacttctctatcgttgtataccaattgagcaagagccgtcttccctaaaccaccaatacc |
10755690 |
T |
 |
| Q |
111 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattct |
210 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||| |||||||||||| || | ||||||| |
|
|
| T |
10755691 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcatcaacaaacttataattttctttttatcatattctcttccaatgatatttgattct |
10755790 |
T |
 |
| Q |
211 |
aacacaaaagaactactttcc |
231 |
Q |
| |
|
||||||||||||||| ||||| |
|
|
| T |
10755791 |
aacacaaaagaactagtttcc |
10755811 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0065 (Bit Score: 137; Significance: 1e-71; HSPs: 2)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 12 - 224
Target Start/End: Complemental strand, 45637 - 45425
Alignment:
| Q |
12 |
agagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacca |
111 |
Q |
| |
|
||||||||||||||||| ||||||||||| | ||| |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
45637 |
agagacacatacccacatcctcttttcaaaagactttgttacttcaccatcattgtataccaattgagcaagagctgtctttcccaaaccgccaatccct |
45538 |
T |
 |
| Q |
112 |
acaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattcta |
211 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||| || || ||||||||| |
|
|
| T |
45537 |
acaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttatgatcttatttctatcatcttctcttccgatgatatctgattctg |
45438 |
T |
 |
| Q |
212 |
acacaaaagaact |
224 |
Q |
| |
|
||||||||||||| |
|
|
| T |
45437 |
acacaaaagaact |
45425 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0065; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 50808 - 50587
Alignment:
| Q |
11 |
cagagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaatacc |
110 |
Q |
| |
|
|||||||||| ||||||| ||||||| |||| | |||| |||||| | |||||||| || ||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
50808 |
cagagacacacacccacatactctttccaaaactcttttttacttcaccgtcattgtaaactaattgagcaagagttgtctttcccaaaccaccaatccc |
50709 |
T |
 |
| Q |
111 |
aacaatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattct |
210 |
Q |
| |
|
|||||||||||||| || |||| ||| |||||||||| || |||||||||||||| ||||| |||| ||| ||||||||||| || || || ||||| |
|
|
| T |
50708 |
aacaatagcaaccacagaaacatgctggttttcatgtggttacctcaacaagcttaaaatctcattttaatcgtcttctcttccgatgatatcagattcg |
50609 |
T |
 |
| Q |
211 |
aacacaaaagaactactttcct |
232 |
Q |
| |
|
||||||||||||||| |||||| |
|
|
| T |
50608 |
aacacaaaagaactattttcct |
50587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 224
Target Start/End: Original strand, 3919085 - 3919296
Alignment:
| Q |
13 |
gagacacatacccacaaactcttttcaaaccaattttgcacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaa |
112 |
Q |
| |
|
|||||||||||||||| |||| |||||||| | ||||||||||| |||||||||||| |||||||||||||| ||||||||| ||||||||||| |||| |
|
|
| T |
3919085 |
gagacacatacccacatactcctttcaaacgagttttgcacttccacatcattgtatatcaattgagcaagagttgtctttcctaaaccaccaatcccaa |
3919184 |
T |
 |
| Q |
113 |
caatagcaaccaaggagacattctgattttcatgtgattgcctcaacaagcttataatcttctttttatcatcttctcttccaataatctctgattctaa |
212 |
Q |
| |
|
||||| |||||| ||||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||| || || |||||||| |
|
|
| T |
3919185 |
caataccaaccacaaagacattttgatttccatgtggttgcatcaacaagcttataatcttctttttatcatcttctcttccaatgatatccgattctaa |
3919284 |
T |
 |
| Q |
213 |
cacaaaagaact |
224 |
Q |
| |
|
| |||| ||||| |
|
|
| T |
3919285 |
cgcaaatgaact |
3919296 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 32408720 - 32408650
Alignment:
| Q |
51 |
cacttcagcatcattgtataccaattgagcaagagctgtctttcccaaaccaccaataccaacaatagcaa |
121 |
Q |
| |
|
||||||| ||||||| || |||||||| ||||| || ||||||||||| || || |||||||||| ||||| |
|
|
| T |
32408720 |
cacttcatcatcattataaaccaattgcgcaagcgccgtctttcccaacccgcccataccaacaacagcaa |
32408650 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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