View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11142_low_67 (Length: 241)

Name: NF11142_low_67
Description: NF11142
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11142_low_67
NF11142_low_67
[»] scaffold0011 (1 HSPs)
scaffold0011 (63-226)||(13082-13245)
[»] chr2 (40 HSPs)
chr2 (63-226)||(16126577-16126740)
chr2 (63-226)||(12016663-12016826)
chr2 (63-226)||(19228422-19228585)
chr2 (65-226)||(22705453-22705614)
chr2 (65-226)||(27665062-27665223)
chr2 (65-226)||(16919172-16919333)
chr2 (65-218)||(39904074-39904227)
chr2 (63-215)||(26229883-26230034)
chr2 (65-226)||(4821281-4821436)
chr2 (78-226)||(13351229-13351378)
chr2 (65-226)||(14377423-14377584)
chr2 (65-199)||(10690781-10690915)
chr2 (79-226)||(16123291-16123438)
chr2 (65-226)||(15411640-15411802)
chr2 (109-226)||(8770904-8771021)
chr2 (104-226)||(2060060-2060183)
chr2 (65-170)||(12438723-12438827)
chr2 (65-226)||(5583576-5583737)
chr2 (63-152)||(43388859-43388948)
chr2 (65-226)||(9747315-9747477)
chr2 (119-226)||(15231883-15231991)
chr2 (65-152)||(23932563-23932650)
chr2 (65-226)||(20566035-20566197)
chr2 (84-226)||(41492151-41492292)
chr2 (68-226)||(12919368-12919528)
chr2 (107-226)||(45062238-45062358)
chr2 (73-222)||(9450263-9450413)
chr2 (67-226)||(37471758-37471920)
chr2 (67-144)||(4579889-4579966)
chr2 (84-172)||(22162149-22162237)
chr2 (63-111)||(29795054-29795102)
chr2 (64-144)||(34214052-34214132)
chr2 (97-226)||(24729595-24729725)
chr2 (75-164)||(25998082-25998172)
chr2 (67-144)||(7757887-7757963)
chr2 (65-174)||(34817542-34817651)
chr2 (67-140)||(27865920-27865992)
chr2 (68-144)||(7720116-7720192)
chr2 (67-123)||(21470831-21470887)
chr2 (158-226)||(35729209-35729277)
[»] chr1 (44 HSPs)
chr1 (65-226)||(313748-313909)
chr1 (63-226)||(39150345-39150508)
chr1 (66-226)||(44918024-44918184)
chr1 (68-226)||(8062206-8062364)
chr1 (63-226)||(17919450-17919613)
chr1 (109-226)||(6570003-6570120)
chr1 (113-226)||(30288882-30288995)
chr1 (68-212)||(32716195-32716339)
chr1 (102-226)||(39930819-39930943)
chr1 (65-226)||(30171877-30172039)
chr1 (65-226)||(30187418-30187580)
chr1 (63-226)||(6754468-6754631)
chr1 (114-225)||(52833491-52833602)
chr1 (64-144)||(51382369-51382449)
chr1 (69-226)||(41624832-41624989)
chr1 (63-226)||(1502738-1502901)
chr1 (63-226)||(34801964-34802127)
chr1 (106-225)||(31100952-31101071)
chr1 (66-222)||(21854139-21854295)
chr1 (63-226)||(6307499-6307662)
chr1 (159-223)||(10896446-10896510)
chr1 (88-226)||(30363013-30363152)
chr1 (114-226)||(9516628-9516741)
chr1 (114-226)||(35438762-35438875)
chr1 (83-226)||(36490795-36490939)
chr1 (65-172)||(39627643-39627751)
chr1 (162-226)||(44007548-44007612)
chr1 (65-226)||(23576432-23576593)
chr1 (63-172)||(23591694-23591804)
chr1 (76-226)||(32543068-32543219)
chr1 (149-226)||(3096292-3096369)
chr1 (67-144)||(3121119-3121195)
chr1 (74-226)||(38539094-38539244)
chr1 (74-226)||(38561312-38561462)
chr1 (158-226)||(24669019-24669087)
chr1 (111-226)||(51920449-51920565)
chr1 (149-219)||(21391924-21391994)
chr1 (63-226)||(13321872-13322036)
chr1 (65-144)||(22331621-22331700)
chr1 (65-144)||(34050384-34050463)
chr1 (104-226)||(2222254-2222375)
chr1 (63-152)||(6520708-6520796)
chr1 (149-226)||(12947572-12947649)
chr1 (119-172)||(43671742-43671795)
[»] chr7 (43 HSPs)
chr7 (67-226)||(39757128-39757287)
chr7 (63-226)||(3561896-3562059)
chr7 (63-226)||(9331958-9332121)
chr7 (63-226)||(19889337-19889500)
chr7 (63-226)||(5909300-5909463)
chr7 (68-226)||(36548478-36548636)
chr7 (65-210)||(47120228-47120373)
chr7 (103-226)||(384448-384571)
chr7 (64-170)||(24250311-24250417)
chr7 (66-226)||(12085949-12086109)
chr7 (64-226)||(23982773-23982936)
chr7 (63-226)||(7169999-7170162)
chr7 (111-226)||(18102248-18102364)
chr7 (65-226)||(24462973-24463134)
chr7 (63-226)||(47457479-47457643)
chr7 (67-179)||(19868114-19868227)
chr7 (74-226)||(25709417-25709570)
chr7 (63-171)||(39869119-39869228)
chr7 (138-226)||(8170593-8170681)
chr7 (63-226)||(33342985-33343148)
chr7 (63-226)||(12624634-12624796)
chr7 (65-226)||(46290009-46290170)
chr7 (63-226)||(7040270-7040433)
chr7 (67-226)||(42750289-42750443)
chr7 (63-226)||(32117811-32117974)
chr7 (77-171)||(24699146-24699240)
chr7 (63-226)||(34270262-34270421)
chr7 (114-226)||(7899504-7899617)
chr7 (149-226)||(41331474-41331551)
chr7 (77-152)||(12650831-12650906)
chr7 (149-226)||(5833438-5833515)
chr7 (63-152)||(44806930-44807019)
chr7 (190-226)||(22334039-22334075)
chr7 (63-182)||(24639539-24639658)
chr7 (104-226)||(8091330-8091453)
chr7 (67-226)||(26300573-26300731)
chr7 (65-144)||(45501457-45501536)
chr7 (68-172)||(27300428-27300534)
chr7 (63-132)||(29398227-29398296)
chr7 (63-123)||(4161878-4161938)
chr7 (158-226)||(8420851-8420919)
chr7 (166-226)||(8594998-8595057)
chr7 (190-226)||(24250622-24250658)
[»] chr8 (51 HSPs)
chr8 (65-226)||(10129102-10129263)
chr8 (63-226)||(13327959-13328122)
chr8 (63-226)||(40210839-40211002)
chr8 (65-226)||(7140477-7140638)
chr8 (63-226)||(39701821-39701984)
chr8 (76-226)||(9801678-9801828)
chr8 (97-226)||(8140598-8140727)
chr8 (64-226)||(19343854-19344017)
chr8 (66-218)||(9743861-9744013)
chr8 (67-226)||(1203602-1203761)
chr8 (65-213)||(38527819-38527971)
chr8 (63-226)||(14816144-14816307)
chr8 (63-226)||(14829433-14829596)
chr8 (67-226)||(35678293-35678452)
chr8 (107-226)||(18567434-18567553)
chr8 (67-226)||(26682068-26682228)
chr8 (63-174)||(39703450-39703561)
chr8 (65-226)||(4080412-4080573)
chr8 (65-226)||(31812111-31812273)
chr8 (148-226)||(45519580-45519658)
chr8 (108-226)||(44091360-44091478)
chr8 (65-226)||(4084561-4084722)
chr8 (65-226)||(4102868-4103029)
chr8 (63-144)||(3306156-3306236)
chr8 (65-226)||(8284586-8284749)
chr8 (99-226)||(39024875-39025002)
chr8 (63-144)||(2161384-2161464)
chr8 (64-226)||(26834558-26834721)
chr8 (63-152)||(6818013-6818102)
chr8 (97-174)||(45516319-45516395)
chr8 (162-226)||(31451420-31451484)
chr8 (63-151)||(35745982-35746070)
chr8 (65-223)||(12131981-12132140)
chr8 (104-225)||(39430522-39430645)
chr8 (74-144)||(26364091-26364160)
chr8 (63-152)||(33514593-33514682)
chr8 (65-179)||(34249675-34249791)
chr8 (65-152)||(13496824-13496912)
chr8 (63-172)||(20514628-20514739)
chr8 (155-225)||(35740948-35741018)
chr8 (114-226)||(7393263-7393375)
chr8 (188-225)||(34405085-34405122)
chr8 (74-226)||(10974576-10974725)
chr8 (66-133)||(7750667-7750734)
chr8 (61-132)||(9824953-9825024)
chr8 (64-226)||(36967088-36967251)
chr8 (64-168)||(38843701-38843806)
chr8 (190-226)||(297219-297255)
chr8 (190-226)||(2161511-2161547)
chr8 (190-226)||(3306073-3306109)
chr8 (65-168)||(45005968-45006072)
[»] chr6 (34 HSPs)
chr6 (63-226)||(2830699-2830862)
chr6 (66-212)||(5362925-5363071)
chr6 (86-214)||(22974603-22974731)
chr6 (86-214)||(23813670-23813798)
chr6 (88-226)||(31069600-31069738)
chr6 (69-226)||(10887031-10887189)
chr6 (67-226)||(1017796-1017956)
chr6 (63-226)||(31568109-31568269)
chr6 (63-152)||(26602523-26602612)
chr6 (65-226)||(8977484-8977646)
chr6 (67-164)||(32615540-32615640)
chr6 (63-226)||(31169781-31169945)
chr6 (63-226)||(6016852-6017016)
chr6 (63-226)||(18332706-18332870)
chr6 (64-226)||(14228144-14228306)
chr6 (65-226)||(28943787-28943948)
chr6 (110-226)||(17596385-17596501)
chr6 (63-144)||(33017721-33017801)
chr6 (97-169)||(3850582-3850654)
chr6 (64-144)||(17552688-17552767)
chr6 (63-152)||(29863395-29863484)
chr6 (83-197)||(34300379-34300493)
chr6 (67-133)||(12454066-12454132)
chr6 (82-131)||(2086949-2086998)
chr6 (158-226)||(31503834-31503902)
chr6 (67-226)||(27819645-27819807)
chr6 (63-132)||(31791028-31791098)
chr6 (190-226)||(3853067-3853103)
chr6 (63-123)||(17596309-17596369)
chr6 (107-172)||(17141315-17141381)
chr6 (63-168)||(30623322-30623428)
chr6 (66-114)||(1814912-1814960)
chr6 (194-226)||(29863320-29863352)
chr6 (198-226)||(32614962-32614990)
[»] chr5 (33 HSPs)
chr5 (63-226)||(30328345-30328508)
chr5 (63-226)||(2795520-2795683)
chr5 (74-226)||(4047420-4047572)
chr5 (63-222)||(9184204-9184363)
chr5 (65-226)||(15190871-15191033)
chr5 (65-226)||(34578010-34578171)
chr5 (67-226)||(12642011-12642170)
chr5 (64-226)||(31365968-31366132)
chr5 (79-219)||(11375972-11376113)
chr5 (63-226)||(11636728-11636891)
chr5 (78-226)||(28629890-28630038)
chr5 (69-226)||(8103598-8103755)
chr5 (108-226)||(41350244-41350362)
chr5 (140-219)||(14466519-14466598)
chr5 (63-171)||(5958196-5958305)
chr5 (63-226)||(36597576-36597739)
chr5 (104-226)||(16174640-16174762)
chr5 (64-226)||(30839779-30839941)
chr5 (66-222)||(24329657-24329813)
chr5 (66-226)||(40512951-40513111)
chr5 (63-132)||(10665077-10665146)
chr5 (107-166)||(29538768-29538827)
chr5 (97-226)||(6863587-6863716)
chr5 (63-144)||(11250058-11250138)
chr5 (102-226)||(31567509-31567634)
chr5 (68-226)||(32020002-32020161)
chr5 (67-172)||(33072677-33072785)
chr5 (190-226)||(30893753-30893789)
chr5 (62-100)||(18150374-18150412)
chr5 (65-226)||(18841723-18841885)
chr5 (64-172)||(35469550-35469660)
chr5 (65-132)||(315340-315408)
chr5 (63-178)||(10658356-10658469)
[»] scaffold0061 (1 HSPs)
scaffold0061 (64-226)||(52797-52959)
[»] scaffold0017 (1 HSPs)
scaffold0017 (64-226)||(145675-145837)
[»] chr3 (37 HSPs)
chr3 (63-226)||(3863326-3863489)
chr3 (63-226)||(11610911-11611074)
chr3 (92-226)||(16875043-16875177)
chr3 (66-224)||(50364190-50364348)
chr3 (63-224)||(54621239-54621399)
chr3 (67-226)||(20938057-20938217)
chr3 (68-180)||(51339248-51339360)
chr3 (63-226)||(13495290-13495454)
chr3 (74-226)||(32553374-32553526)
chr3 (65-226)||(38389445-38389607)
chr3 (113-226)||(29686367-29686480)
chr3 (97-226)||(40497078-40497207)
chr3 (104-225)||(38786343-38786463)
chr3 (63-226)||(37055384-37055548)
chr3 (65-226)||(2571267-2571428)
chr3 (63-157)||(30214098-30214191)
chr3 (65-144)||(12515575-12515653)
chr3 (113-224)||(24978693-24978804)
chr3 (65-152)||(46845533-46845620)
chr3 (65-144)||(10307765-10307843)
chr3 (64-226)||(36426427-36426592)
chr3 (69-226)||(46492361-46492519)
chr3 (65-226)||(51618048-51618207)
chr3 (63-152)||(37444143-37444231)
chr3 (64-152)||(47386919-47387008)
chr3 (65-226)||(23638067-23638229)
chr3 (185-226)||(36812377-36812418)
chr3 (150-226)||(23523030-23523106)
chr3 (67-219)||(1569215-1569368)
chr3 (83-132)||(35094972-35095021)
chr3 (190-226)||(11611100-11611136)
chr3 (158-226)||(49396472-49396540)
chr3 (67-132)||(43750052-43750117)
chr3 (83-152)||(49396367-49396436)
chr3 (104-152)||(9710981-9711029)
chr3 (74-182)||(37332122-37332229)
chr3 (66-118)||(39365258-39365310)
[»] scaffold0727 (1 HSPs)
scaffold0727 (68-226)||(5692-5851)
[»] chr4 (47 HSPs)
chr4 (68-226)||(23553571-23553730)
chr4 (78-226)||(29190834-29190982)
chr4 (63-226)||(7349685-7349848)
chr4 (74-226)||(35999965-36000110)
chr4 (99-226)||(48910820-48910947)
chr4 (92-226)||(53961348-53961482)
chr4 (66-226)||(10389286-10389446)
chr4 (98-226)||(41415575-41415703)
chr4 (102-226)||(4329630-4329754)
chr4 (63-167)||(49228353-49228457)
chr4 (64-226)||(16667402-16667565)
chr4 (81-225)||(10813513-10813658)
chr4 (64-226)||(54495655-54495818)
chr4 (66-175)||(49650210-49650319)
chr4 (63-226)||(27362387-27362551)
chr4 (63-226)||(47326910-47327074)
chr4 (63-226)||(47341706-47341870)
chr4 (63-226)||(8736829-8736992)
chr4 (64-226)||(49181069-49181232)
chr4 (136-226)||(23051400-23051490)
chr4 (65-226)||(34941276-34941438)
chr4 (66-226)||(9759160-9759320)
chr4 (64-144)||(50352300-50352379)
chr4 (65-144)||(10658545-10658623)
chr4 (65-144)||(10872690-10872768)
chr4 (104-226)||(37784878-37785001)
chr4 (65-144)||(40049557-40049635)
chr4 (65-226)||(2096869-2097031)
chr4 (77-226)||(23438164-23438315)
chr4 (80-144)||(39876844-39876907)
chr4 (64-132)||(49332330-49332398)
chr4 (68-168)||(39539465-39539566)
chr4 (65-168)||(23545474-23545578)
chr4 (63-226)||(52391294-52391458)
chr4 (65-132)||(9326982-9327049)
chr4 (65-132)||(9373704-9373771)
chr4 (65-132)||(9382016-9382083)
chr4 (65-226)||(17409822-17409984)
chr4 (78-132)||(40681960-40682014)
chr4 (65-114)||(48910965-48911014)
chr4 (166-226)||(49228754-49228814)
chr4 (65-103)||(39876807-39876845)
chr4 (67-179)||(6875501-6875614)
chr4 (111-152)||(16069300-16069341)
chr4 (64-117)||(36968285-36968338)
chr4 (190-227)||(40682556-40682593)
chr4 (190-226)||(39876954-39876990)
[»] scaffold0155 (1 HSPs)
scaffold0155 (74-226)||(3431-3587)
[»] scaffold0018 (1 HSPs)
scaffold0018 (102-226)||(182079-182202)
[»] scaffold0111 (1 HSPs)
scaffold0111 (65-226)||(37132-37294)
[»] scaffold0009 (2 HSPs)
scaffold0009 (63-226)||(43458-43624)
scaffold0009 (104-179)||(191379-191454)
[»] scaffold0618 (1 HSPs)
scaffold0618 (108-226)||(8432-8550)
[»] scaffold0073 (1 HSPs)
scaffold0073 (63-226)||(16553-16716)
[»] scaffold0036 (1 HSPs)
scaffold0036 (68-226)||(94036-94195)
[»] scaffold0136 (1 HSPs)
scaffold0136 (158-226)||(1461-1529)
[»] scaffold0192 (1 HSPs)
scaffold0192 (194-226)||(13581-13613)


Alignment Details
Target: scaffold0011 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 13082 - 13245
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  13082 aagggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattgttgattaaaagctacatatt 13181  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||    
T  13182 taatataaaaaacacaaattccaaattaaagttactattttaaacttcttaacatgtgcaaatt 13245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 5e-71; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 16126740 - 16126577
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16126740 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 16126641  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||    
T  16126640 taatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgtgcaaatt 16126577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 12016663 - 12016826
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  12016663 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatt 12016762  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  || ||||| ||||||||||||||||||||| |||||||||||    
T  12016763 taatataaaaaacacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatt 12016826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 19228422 - 19228585
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  19228422 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatt 19228521  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| ||||||||||| ||  || | |||||||||||||||||||||||||||||||||||||    
T  19228522 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatt 19228585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 22705453 - 22705614
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||| ||| |||| ||||||||||    
T  22705453 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattaatttaaagttacatattta 22705552  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| ||  || ||||| ||||||||||||||||||||| |||||||||||    
T  22705553 atataaaaaacacaagtttcaagttaaaattactactttaaacttcttaaaatgtgcaaatt 22705614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 27665223 - 27665062
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||    
T  27665223 gggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatattta 27665124  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  27665123 atataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatt 27665062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 16919333 - 16919172
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||    
T  16919333 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttgttgaaaaccaacaattattgattaaaagttacatattta 16919234  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| ||  || | |||||||||||||||||||| |||| |||||||||||    
T  16919233 atataaaaaacacaagtttcaagtcaaagttactactttaaacttgttaatatgtgcaaatt 16919172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 39904227 - 39904074
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||    
T  39904227 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatgttta 39904128  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatg 218  Q
    |||||||||||| || ||  || ||||| |||||||||||||||||||||||||    
T  39904127 atataaaaaacataagttccaagttaaatttactactttaaacttcttaacatg 39904074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 63 - 215
Target Start/End: Complemental strand, 26230034 - 26229883
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||||    
T  26230034 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaattttttatt-aaaaccaacaattattgattaaaagttacatatt 26229936  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaac 215  Q
    |||||||||||| | ||||| ||| | |||||||||| |||||||||||||||    
T  26229935 taatataaaaaatataaattttaagtcaaagttactattttaaacttcttaac 26229883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 4821281 - 4821436
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| |||||||||||||||||||||| ||| || |||||      |||| ||||||||||||||||||||||||| |||||||||||||||||||    
T  4821281 gggtttgtctaacatgtgcaatattgcatatgttatggcaacta------gtaacttttcattgaaaaccaacaattatttattaaaagctacatattta 4821374  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| ||  |||| |||||||||||||||||||||||| ||||||||||||    
T  4821375 atataaaaaacacaagtttcaaatcaaagttactactttaaacttcttatcatgtgcaaatt 4821436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 13351378 - 13351229
Alignment:
Q  78 atgtgcaatattgcatatattaaggtaactaaaagtagtaatttttc-attgaaaaccaacaattattgattaaaagctacatatttaatataaaaaaca 176  Q
    ||||||||||||||| || |||||||||||||||||||| ||||||  |||||||| ||||||||||| |||||||| |||||||| |||||||||||||    
T  13351378 atgtgcaatattgcacatgttaaggtaactaaaagtagttatttttttattgaaaatcaacaattattaattaaaagttacatattaaatataaaaaaca 13351279  T
Q  177 caaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||| || ||| | |||||||||||||||||||||||||||||||||||||    
T  13351278 caagttctaagtcaaagttactactttaaacttcttaacatgtgcaaatt 13351229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 14377423 - 14377584
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||| ||||||||||||| || |||||| ||||||||||||||| |||| ||||||||||||||||||||  ||||||| ||||||||||    
T  14377423 gggtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattgaaaaccaacaattatttgttaaaagttacatattta 14377522  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| ||  || | |||||||||||||||||||||||| ||||| ||||||    
T  14377523 atataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtacaaatt 14377584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 65 - 199
Target Start/End: Original strand, 10690781 - 10690915
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || ||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  10690781 gggtttgtctaacatgtgcaatattgcacatgttaagttaactaaaattagtaatttttcattaaaaaccaacaattattgattaaaagctacatattta 10690880  T
Q  165 atataaaaaacacaaattataaattaaagttacta 199  Q
    |||||||||||| || ||  |||||||| ||||||    
T  10690881 atataaaaaacataagtttcaaattaaaattacta 10690915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 79 - 226
Target Start/End: Original strand, 16123291 - 16123438
Alignment:
Q  79 tgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacaca 178  Q
    |||||||||||||| || |||||||||||||||| ||||| |||||||||||||| ||||||| ||||||||| | ||||||||||||||||||||||||    
T  16123291 tgtgcaatattgcacatgttaaggtaactaaaagaagtaacttttcattgaaaacaaacaattgttgattaaatgttacatatttaatataaaaaacaca 16123390  T
Q  179 aattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | ||   ||| ||| |||||| ||||||||||||| ||||||||||||    
T  16123391 agttcctaatcaaaattactaatttaaacttcttatcatgtgcaaatt 16123438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 15411802 - 15411640
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| ||||||||||||||||||| || |||| |||||||||||||||||||||| |||||||| ||||||| ||| ||| |||||||||||||||    
T  15411802 gggtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaattttttattgaaaaacaacaataatttattaaaaagctacatattt 15411703  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||   |||| ||  ||   |||||||||| ||||||||||||||||||||||||||    
T  15411702 aatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatt 15411640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 8771021 - 8770904
Alignment:
Q  109 aaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaact 208  Q
    |||||||||| |||||| | |||||||||||||||| |||||||| |||||||||||||||||||||| |||||  || | ||| |||||||||||||||    
T  8771021 aaagtagtaacttttcaataaaaaccaacaattatttattaaaagttacatatttaatataaaaaacaaaaatttcaagtcaaaattactactttaaact 8770922  T
Q  209 tcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||    
T  8770921 tcttaacatgtgcaaatt 8770904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 2060183 - 2060060
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaa-agctacatatttaatataaaaaacacaaattataaattaaagttactactt 202  Q
    ||||||||||| ||| |||||||| |||| ||||||||||| |||||| ||||||||||||||||||||| |||||||||  || |||||||||||||||    
T  2060183 aactaaaagtaataacttttcattaaaaatcaacaattatttattaaagagctacatatttaatataaaagacacaaattccaagttaaagttactactt 2060084  T
Q  203 taaacttcttaacatgtgcaaatt 226  Q
    |||| ||||||||||||| |||||    
T  2060083 taaatttcttaacatgtgtaaatt 2060060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 65 - 170
Target Start/End: Complemental strand, 12438827 - 12438723
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| |||||||||||||||||||||| || ||  |||||||| || ||| |||||||| |||||||||||||||| ||||||| ||| |||||||    
T  12438827 gggtttgtataacatgtgcaatattgcatatgttcagacaactaaaaataataacttttcatt-aaaaccaacaattatttattaaaaactatatattta 12438729  T
Q  165 atataa 170  Q
    ||||||    
T  12438728 atataa 12438723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 5583737 - 5583576
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattt 163  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||| ||||||||||||| || |  ||||| || ||||||    
T  5583737 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatattt 5583639  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  5583638 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 5583576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 43388948 - 43388859
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||||| ||| ||||||||||||||| || |||| | |||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  43388948 aagggtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 43388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 9747315 - 9747477
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattt 163  Q
    |||||||| |||||||||||||| | || || ||||  |||||||||||||||| | || |||||||| |||||| || |||   |||||||||||||||    
T  9747315 gggtttgtctaacatgtgcaatagtacacatgttaaattaactaaaagtagtaactatttattgaaaaacaacaactatttgtaaaaaagctacatattt 9747414  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||   |||| ||  ||   ||| |||||| |||||||||||||||||||| |||||    
T  9747415 aatataaaatgaacaagttccaagacaaaattactattttaaacttcttaacatgtgaaaatt 9747477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 15231883 - 15231991
Alignment:
Q  119 tttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacat 217  Q
    ||||| |||||||| ||| | ||||| ||||||| | |||||||||||||| |||  ||||| || ||| | |||||||| |||||||||||||||||||    
T  15231883 ttttttattgaaaaacaaaacttatttattaaaaagttacatatttaatatgaaatgcacaagttttaagtcaaagttaccactttaaacttcttaacat 15231982  T
Q  218 gtgcaaatt 226  Q
    |||||||||    
T  15231983 gtgcaaatt 15231991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 152
Target Start/End: Original strand, 23932563 - 23932650
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||| ||||||||||||||||||| || |||| | |||||||| |||||| ||| |||||||||  |||||||||| |||||||    
T  23932563 gggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaa 23932650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 20566197 - 20566035
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatattt 163  Q
    |||| ||| ||||||||||||||||||| || |||| |||||||||| ||| || | || |||||||| ||||||||||| |||||||   ||  |||||    
T  20566197 gggtctgtctaacatgtgcaatattgcacatgttaaagtaactaaaaatagcaactatttattgaaaaacaacaattatttattaaaatattatctattt 20566098  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| |||| |||||| ||  ||   |||  || ||||||||||||||||||||||| |||||    
T  20566097 aataaaaaatacacaagttccaatacaaacataatactttaaacttcttaacatgtgtaaatt 20566035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 41492292 - 41492151
Alignment:
Q  84 aatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaatta 183  Q
    ||||||| | ||||||||| || |||||||| || ||| | ||||||||  ||||||||||  | |||| || ||||||||||| ||||  ||||| ||     
T  41492292 aatattgtacatattaaggaaattaaaagtaatattttattattgaaaaagaacaattattt-taaaaaacttcatatttaataaaaaatgcacaagttt 41492194  T
Q  184 taaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
     || ||||||||| |||||||||||||||| ||||||||||||    
T  41492193 caagttaaagttattactttaaacttcttatcatgtgcaaatt 41492151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 12919528 - 12919368
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaa-tttttcattgaaaaccaacaattattgatt-aaaagctacatatttaa 165  Q
    ||||| ||||||||||||||||||| || |||| | || |||||||| ||| ||||| ||||||||  | |||| ||| ||| |||| ||||||||||||    
T  12919528 tttgtctaacatgtgcaatattgcacatgttaaagcaattaaaagtattaatttttttattgaaaagtagcaataatttattaaaaaactacatatttaa 12919429  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||   |||| ||  ||  ||||||||||| |||||| || |||||||||| |||||    
T  12919428 tataaaatgaacaagtttcaagataaagttactattttaaattttttaacatgtgtaaatt 12919368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 226
Target Start/End: Original strand, 45062238 - 45062358
Alignment:
Q  107 taaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactactttaa 205  Q
    ||||||| |||| |||| ||| |||| ||| ||||||| ||||||| | ||||| ||||||||||||  ||||| ||  ||| ||||||||||| ||| |    
T  45062238 taaaagtggtaactttttattaaaaaacaaaaattatttattaaaaagttacatgtttaatataaaatgcacaagttccaaaataaagttactattttga 45062337  T
Q  206 acttcttaacatgtgcaaatt 226  Q
    ||||||||| |||||||||||    
T  45062338 acttcttaatatgtgcaaatt 45062358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 73 - 222
Target Start/End: Original strand, 9450263 - 9450413
Alignment:
Q  73 gtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaa 171  Q
    |||||||||||||||||||| || |||| |||  ||||| ||  || | || |||||||| ||||||||||| ||| ||||  || |||||||||| |||    
T  9450263 gtaacatgtgcaatattgcacatcttaaagtagttaaaaataaaaactatttattgaaaaacaacaattatttattaaaaaattatatatttaatagaaa 9450362  T
Q  172 aaacacaaattataaattaaagttactactttaaacttcttaacatgtgca 222  Q
    | |||||||||  ||   |||  |||||||||||| |||||||||||||||    
T  9450363 atacacaaattccaatacaaacatactactttaaatttcttaacatgtgca 9450413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 37471920 - 37471758
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatatt-aaggtaactaaaagtagtaatttttc-attgaaaaccaacaattattgattaaaag-ctacatattt 163  Q
    |||||| |||||| || ||||||||| || || || | |||||||| ||||| |||||  |||||||  ||||||| ||| |||||||  ||||||||||    
T  37471920 gtttgtctaacatttgtaatattgcacatgtttaaagcaactaaaaatagtattttttttattgaaagacaacaataatttattaaaaaactacatattt 37471821  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||   |||| ||  ||   |||||||||| ||||||||||||||||||||||||||    
T  37471820 aatataaaatgaacaagtttcaagacaaagttactattttaaacttcttaacatgtgcaaatt 37471758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 4579966 - 4579889
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||| |||||||||||||||| || || |||||| |||||||  |||||| ||||||||||||| || ||||||||    
T  4579966 gtttgtctaacatgtgcaatattacacatgttaaggaaactaaatatagtaacttttcattgaaaaacaccaattatt 4579889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 22162237 - 22162149
Alignment:
Q  84 aatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaa 172  Q
    ||||||||| || |||||| ||||||||||||||| |||| |||| ||||||||||||| | ||| |||| ||||||| |||||||||||    
T  22162237 aatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaaccaacaattaattattaaaaatctacatagttaatataaaa 22162149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 29795054 - 29795102
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaa 111  Q
    |||||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  29795054 aagggtttgtctaacatgtgcaatattgcacatattaaagtaactaaaa 29795102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 34214132 - 34214052
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    ||||||||| ||||||||  |||| |||| || |||| | |||||||| |||||| |||| ||||||||||||||||||||    
T  34214132 agggtttgtctaacatgtataatactgcacatgttaaagcaactaaaaatagtaagtttttattgaaaaccaacaattatt 34214052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 226
Target Start/End: Complemental strand, 24729725 - 24729595
Alignment:
Q  97 ttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagtt 195  Q
    |||| |||||||||| |||||| |||| ||||||||  || ||||||| ||||||| | ||  || |||||| |||| | |||||||  ||   ||||||    
T  24729725 ttaaagtaactaaaaatagtaaatttttattgaaaataaataattatttattaaaaagttatgtaattaatacaaaatatacaaattccaatgcaaagtt 24729626  T
Q  196 actactttaaacttcttaacatgtgcaaatt 226  Q
    |||| |||||| |||||||||||||||||||    
T  24729625 actattttaaatttcttaacatgtgcaaatt 24729595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 164
Target Start/End: Complemental strand, 25998172 - 25998082
Alignment:
Q  75 aacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattta 164  Q
    |||||||||| ||||||| || |||| ||||||||||||   || |||| |||||||| ||||||||||| ||| ||||| ||||||||||    
T  25998172 aacatgtgcattattgcacatgttaaagtaactaaaagtgaaaactttttattgaaaaacaacaattatttattaaaaagatacatattta 25998082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 144
Target Start/End: Complemental strand, 7757963 - 7757887
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||| |||||||||||| |||| | || ||||||||||||||||||  || |||| ||| ||||||||||||||||    
T  7757963 gtttgtctaacatgtgcaaaattgtacatgttaaggtaactaaaagtaacaagtttttatt-aaaaccaacaattatt 7757887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 174
Target Start/End: Original strand, 34817542 - 34817651
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||| ||||||||||||  ||||||  ||||||||| ||  || | || |||||||| ||||||||||| ||| ||||| || ||||||    
T  34817542 gggtttgtctaacatatgcaatattgcacgtattaaaataactaaaaatatcaactatttattgaaaa-caacaattatttattaaaaagttatatattt 34817640  T
Q  164 aatataaaaaa 174  Q
    |||| ||||||    
T  34817641 aataaaaaaaa 34817651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 140
Target Start/End: Complemental strand, 27865992 - 27865920
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaat 140  Q
    |||||| ||||||| ||||  |||||||| |||| | ||||||||||| |||||||| |||||||| |||||||    
T  27865992 gtttgtctaacatgagcaacgttgcatatgttaaagaaactaaaagtaataattttt-attgaaaaacaacaat 27865920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 7720116 - 7720192
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    ||||| |||||||||||| |||||| || ||||   |||||| |||||||| ||||  ||||||| |||||||||||    
T  7720116 tttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttgaaaaacaacaattatt 7720192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 21470887 - 21470831
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaattttt 123  Q
    |||||| || |||||||||||||||| |||||||   |||||||||||||| |||||    
T  21470887 gtttgtctaccatgtgcaatattgcacatattaaaagaactaaaagtagtatttttt 21470831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 35729209 - 35729277
Alignment:
Q  158 atatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| ||||||| |||||| ||  ||  |||| || ||||||||||||||| ||||||||||||||    
T  35729209 atatttactataaaatacacaagttccaatataaatttgctactttaaacttctcaacatgtgcaaatt 35729277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 313748 - 313909
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  313748 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttgattgaaaaccaacaattattgattaaaagctacatattta 313847  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||    
T  313848 atataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatt 313909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 39150508 - 39150345
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  39150508 aagggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatt 39150409  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||||  || | |||||||||||||||||||||||| ||||||||||||    
T  39150408 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttatcatgtgcaaatt 39150345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 44918024 - 44918184
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaa 165  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||    
T  44918024 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaaatttttattgaaaatcaacaattattgattaaaagctacatatttaa 44918123  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||| || ||  |||||||||||||||||||||| ||||||||||||| |||||    
T  44918124 tataaaaaacataagttccaaattaaagttactactttaaatttcttaacatgtgtaaatt 44918184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 8062206 - 8062364
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaata 167  Q
    ||||| ||||||||||||||||| | || |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| ||| ||||||||||    
T  8062206 tttgtttaacatgtgcaatattgaacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaaactatatatttaata 8062305  T
Q  168 taaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||| |||||  ||||||||||||||||||||||||| ||||||||||||||||    
T  8062306 taaaaaacataaatttcaaattaaagttactactttaaactttttaacatgtgcaaatt 8062364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 17919450 - 17919613
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||| | || |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  17919450 aagggtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatt 17919549  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||||  || | ||||||||||||||||||||||||  |||||||||||    
T  17919550 taatataaaaaacacaaattccaagtcaaagttactactttaaacttcttattatgtgcaaatt 17919613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 6570120 - 6570003
Alignment:
Q  109 aaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaact 208  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||    
T  6570120 aaagtactaacttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaact 6570021  T
Q  209 tcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||    
T  6570020 tcttaacatgtgcaaatt 6570003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 30288995 - 30288882
Alignment:
Q  113 tagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  || ||||| |||||||||||||||||||    
T  30288995 tagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaagttccaagttaaaattactactttaaacttctt 30288896  T
Q  213 aacatgtgcaaatt 226  Q
    |||||||| |||||    
T  30288895 aacatgtgtaaatt 30288882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 68 - 212
Target Start/End: Complemental strand, 32716339 - 32716195
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaata 167  Q
    ||||| ||||||||||||||||||| || |||||||||||||| | ||||| ||||| |||||||| ||||||||||||||||| | |||||||||||||    
T  32716339 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaatgaagtaacttttcgttgaaaacaaacaattattgattaaatgttacatatttaata 32716240  T
Q  168 taaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    |||||||||||| ||   ||| ||| |||||||||||||||||||    
T  32716239 taaaaaacacaagttcctaatcaaaattactactttaaacttctt 32716195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 39930943 - 39930819
Alignment:
Q  102 gtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactact 201  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||||||| |||||||| |||||||||||| |||| ||  || ||||||||||||||    
T  39930943 gtaactaaaagtagtaatttttcattgaaaacaaataattatttattaaaaactacatatataatataaaaaatacaagtttcaagttaaagttactact 39930844  T
Q  202 ttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||| ||||||||||||    
T  39930843 ttaaacttcttatcatgtgcaaatt 39930819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 30171877 - 30172039
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatattt 163  Q
    |||||||| |||||||||||| |||||| || |||||  | |||||||||||||||||| |||||||| ||| | ||||| ||||||| |||||||||||    
T  30171877 gggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatattt 30171976  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||  ||||| ||  || | |||||||| ||||||||||||||||||||||||||||    
T  30171977 aatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatt 30172039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 30187418 - 30187580
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatattt 163  Q
    |||||||| |||||||||||| |||||| || |||||  | |||||||||||||||||| |||||||| ||| | ||||| ||||||| |||||||||||    
T  30187418 gggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatattt 30187517  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||  ||||| ||  || | |||||||| ||||||||||||||||||||||||||||    
T  30187518 aatatgaaatgcacaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatt 30187580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 6754468 - 6754631
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatat 161  Q
    ||||| |||| ||||||||||||||||||| || |||||| |||||||| |||||| |||| ||||||| |||||||||| | |||||||  |||||||     
T  6754468 aagggattgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataa 6754566  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||  ||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  6754567 ttaatataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatt 6754631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 114 - 225
Target Start/End: Complemental strand, 52833602 - 52833491
Alignment:
Q  114 agtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttctta 213  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||| ||||||||  || | ||| |||||| |||||||||||||    
T  52833602 agtaatttttcattgaaaacaaacaattatttattaaaagctacatatttattataaaaatcacaaatttcaagtcaaaattactattttaaacttctta 52833503  T
Q  214 acatgtgcaaat 225  Q
     |||||||||||    
T  52833502 tcatgtgcaaat 52833491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 51382369 - 51382449
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||    
T  51382369 agggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattatt 51382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 41624832 - 41624989
Alignment:
Q  69 ttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaata 167  Q
    |||| ||||||||||||||||||| || |||| | |||||||| |||||| |||| ||||||| |||||||||| | |||||||  ||||||| ||||||    
T  41624832 ttgtctaacatgtgcaatattgcacatgttaaagcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaata 41624930  T
Q  168 taaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||  ||||| ||  || | |||||||||||||||||||||||| ||| ||||||||    
T  41624931 taaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatatgcaaatt 41624989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 1502901 - 1502738
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatat 161  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||||||| ||||||||| || |  ||||| || ||||    
T  1502901 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattgaaaa-caacaattatttaacaaaaagttatatat 1502803  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| ||||    ||||||  ||   |||||||||| |||||| |||||||||||||||||||    
T  1502802 ttaatacaaaatgttcaaattccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 1502738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 34801964 - 34802127
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||| |||||| || ||||| || |||||||||||||||||| |||||||| ||| | ||||| ||| |||| ||||||||    
T  34801964 aagggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaaactacatat 34802063  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||  ||||| ||  | |  ||| |||| | ||||||||||||||||||||||||||    
T  34802064 ttaatatgaaatgcacaagttccaga-caaaattaccattttaaacttcttaacatgtgcaaatt 34802127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 225
Target Start/End: Complemental strand, 31101071 - 31100952
Alignment:
Q  106 ctaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactacttta 204  Q
    ||||||||||||||||| ||||||||| ||||| ||||| ||||||| || |||||||||||||||||  ||||| || ||| | |||||||| ||||||    
T  31101071 ctaaaagtagtaatttt-cattgaaaaacaacacttatttattaaaaagcaacatatttaatataaaatgcacaagttttaagtcaaagttaccacttta 31100973  T
Q  205 aacttcttaacatgtgcaaat 225  Q
    || ||||||| ||||||||||    
T  31100972 aatttcttaatatgtgcaaat 31100952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 222
Target Start/End: Complemental strand, 21854295 - 21854139
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattga-ttaaaagctacatattta 164  Q
    ||||||| |||||||||||| ||||   || ||||| || |||||||||||||||||| |||||||| ||||| ||||| | ||||||| ||| ||||||    
T  21854295 ggtttgtctaacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctattta 21854197  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgca 222  Q
    ||||||||   |||| ||  || | |||||||| ||||||||||| ||||||||||||    
T  21854196 atataaaatgtacaagttccaagtcaaagttaccactttaaactttttaacatgtgca 21854139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 6307499 - 6307662
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatat- 161  Q
    |||||||||| |||||||||||| ||||||||| |||| |||||||||||  | || | || |||| ||| ||||||||||| |||||||  |  ||||     
T  6307499 aagggtttgtctaacatgtgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaattt-atata 6307597  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| |||| |||||| ||  |||| |||  || |||||||||||||||||||||||||||||    
T  6307598 ttaatagaaaatacacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatt 6307662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 10896446 - 10896510
Alignment:
Q  159 tatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaa 223  Q
    ||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||||||    
T  10896446 tatttaatataaaaaacacaagttcaaagttaaagttactactttaaacttcttaacatgtgcaa 10896510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 226
Target Start/End: Complemental strand, 30363152 - 30363013
Alignment:
Q  88 ttgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagc-tacatatttaatataaaaaacacaaattataa 186  Q
    ||||| || ||||||  ||||||| |||||| |||| |||||||||||||||||| | ||||||| | ||||||||||||||||||  ||||| ||  ||    
T  30363152 ttgcacatgttaaggctactaaaaatagtaactttttattgaaaaccaacaattaattattaaaaacctacatatttaatataaaatgcacaagttccaa 30363053  T
Q  187 attaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
     | |||||||||| |||||| || ||| ||||||||||||    
T  30363052 gtcaaagttactattttaaatttgttatcatgtgcaaatt 30363013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 9516628 - 9516741
Alignment:
Q  114 agtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    ||||| ||||||||||||| || |||||||| ||||||| | || ||||||||||||||| |||||| ||||||   ||| |||| | |||||| |||||    
T  9516628 agtaacttttcattgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagttataagagaaacttaccattttaaatttctt 9516727  T
Q  213 aacatgtgcaaatt 226  Q
    ||||||||||||||    
T  9516728 aacatgtgcaaatt 9516741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 35438762 - 35438875
Alignment:
Q  114 agtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    ||||| |||| |||||||| || ||||| || ||||||| | || ||||||||||||||| |||||||||||||  |||| |||| | |||||| |||||    
T  35438762 agtaacttttaattgaaaaacaccaattgtttattaaaaagttatatatttaatataaaatacacaaattataagataaacttaccattttaaatttctt 35438861  T
Q  213 aacatgtgcaaatt 226  Q
    ||||||||||||||    
T  35438862 aacatgtgcaaatt 35438875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 36490795 - 36490939
Alignment:
Q  83 caatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacacaaat 181  Q
    |||||||||| || |||| | || |||||||||||| |||| |||||||| ||||||||||| ||| ||||| || ||||| |||| ||||   |||| |    
T  36490795 caatattgcacatgttaaagcaattaaaagtagtaagtttttattgaaaaacaacaattatttattaaaaagttatatattaaatacaaaatgtacaagt 36490894  T
Q  182 tataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |  ||   |||||||||| ||||||||||||||||||||||||||    
T  36490895 tccaatgcaaagttactattttaaacttcttaacatgtgcaaatt 36490939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 172
Target Start/End: Complemental strand, 39627751 - 39627643
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||||||| || || |||||| |||||||| ||| || |||| |||||||| ||||||| | | ||| ||||| |||||||||    
T  39627751 gggtttgtctaacatgtgcaatattacacatgttaaggaaactaaaaatagcaacttttaattgaaaaacaacaatcacttattgaaaagttacatattt 39627652  T
Q  164 aatataaaa 172  Q
    |||||||||    
T  39627651 aatataaaa 39627643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 44007612 - 44007548
Alignment:
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||| ||  || |||||||| ||||||||||||||||||||||||||||||    
T  44007612 ttaatataaaaaacacaagttccaagttaaagttgctactttaaacttcttaacatgtgcaaatt 44007548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 23576593 - 23576432
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattt 163  Q
    |||||||| |||||| |||||||||||| || ||||||||||||||||||  || |||| |||| ||||||||||||| || |  ||||| || ||||||    
T  23576593 gggtttgtctaacatctgcaatattgcacatgttaaggtaactaaaagtaacaagtttttattg-aaaccaacaattatttaacaaaaagttatatattt 23576495  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  23576494 aatacaaaatgttcaagtttcaatgcaaagttactattttaaatttcttaacatgtgcaaatt 23576432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 23591694 - 23591804
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||| |||||| || |||| | |||||||| |||||| |||| |||||||| ||| ||||||| ||| ||||| || ||||    
T  23591694 aagggtttgtctaacatgtgcaacattgcacatgttaaagcaactaaaattagtaagtttttattgaaaatcaataattatttattaaaaagttatatat 23591793  T
Q  162 ttaatataaaa 172  Q
    |||||| ||||    
T  23591794 ttaatacaaaa 23591804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 32543219 - 32543068
Alignment:
Q  76 acatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctac-atatttaatataaaaaa 174  Q
    |||||||||||| ||||||| |||| ||||  |||||||| | ||||| |||||||  ||||||||||| |||||||   |  ||||||||||||| |      
T  32543219 acatgtgcaatactgcatattttaaagtaataaaaagtagcatttttttattgaaagacaacaattatttattaaaaaacagtatatttaatataatacg 32543120  T
Q  175 cacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||| |||   ||| ||||||  || ||||||||||||||||||||||    
T  32543119 cacaaattctaatacaaacttactaacttgaacttcttaacatgtgcaaatt 32543068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 3096292 - 3096369
Alignment:
Q  149 aaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||||||||||||||||||||| || || ||| ||||| ||| ||||||||| || ||| ||||||||||||    
T  3096292 aaaatctacatatttaatataaaaaacataagttttaagttaaaattattactttaaattttttatcatgtgcaaatt 3096369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 144
Target Start/End: Original strand, 3121119 - 3121195
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||| ||| |||||||||||| ||||| ||||||||| ||||||||| || |||| |||| |||||||||||||||    
T  3121119 gtttgtctaatatgtgcaatattacatatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatt 3121195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 38539094 - 38539244
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaa 173  Q
    ||||||||||||||||||| || |||||| ||||||| |||| || ||| ||||| ||| || ||||||||  | ||||| ||  |||||  |||| ||     
T  38539094 taacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctattt--tatagaat 38539191  T
Q  174 acacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | ||||||| |||  |||| || | |||||||| |||||||||||||||||||    
T  38539192 atacaaattttaagataaacttgccactttaaatttcttaacatgtgcaaatt 38539244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 38561312 - 38561462
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaa 173  Q
    ||||||||||||||||||| || |||||| ||||||| |||| || ||| ||||| ||| || ||||||||  | ||||| ||  |||||  |||| ||     
T  38561312 taacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctattt--tatagaat 38561409  T
Q  174 acacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | ||||||| |||  |||| || | |||||||| |||||||||||||||||||    
T  38561410 atacaaattttaagataaacttgccactttaaatttcttaacatgtgcaaatt 38561462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 24669019 - 24669087
Alignment:
Q  158 atatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||  || || ||||||  |||| |||||| ||||||||||||||||||||||||||    
T  24669019 atatttaatataaaatgcataagttataatataaatttactattttaaacttcttaacatgtgcaaatt 24669087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 226
Target Start/End: Complemental strand, 51920565 - 51920449
Alignment:
Q  111 agtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaactt 209  Q
    |||||||||||||  ||||||| ||||||||||| ||| ||||| |  ||||||||||| ||| | ||||||| |||  |||| || ||| |||||| ||    
T  51920565 agtagtaatttttttttgaaaaacaacaattatttattcaaaagttttatatttaatattaaatatacaaattttaatataaaatttctattttaaattt 51920466  T
Q  210 cttaacatgtgcaaatt 226  Q
     ||||||||||||||||    
T  51920465 attaacatgtgcaaatt 51920449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 149 - 219
Target Start/End: Complemental strand, 21391994 - 21391924
Alignment:
Q  149 aaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgt 219  Q
    |||| ||| |||||| |||||||| |||||| || |||   ||||||||||||||||||||||||||||||    
T  21391994 aaaaactaaatattttatataaaatacacaagttctaagccaaagttactactttaaacttcttaacatgt 21391924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 13321872 - 13322036
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||| |||| | || ||||   |||||| |||||||| ||||  ||||||| |||||||||||  || ||||| |  ||||    
T  13321872 aagggtttgtctaacatgtgcaacattgtacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattattttttcaaaagttttatat 13321971  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||   |||||||  ||   ||| || ||| ||||||||||||||||| ||||||||    
T  13321972 ttaatattaaatgtacaaattccaatacaaaatttctattttaaacttcttaacatatgcaaatt 13322036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 22331621 - 22331700
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||| |||||||||||| |||||| || ||||  || |||| |||||||| ||||  ||||||| |||||||||||    
T  22331621 gggtttgtctaacatgtgcaacattgcacatgttaaaatatctaatagtagtaactttttcttgaaaaacaacaattatt 22331700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 34050463 - 34050384
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||| ||||||||||||||||||| || |||| | ||| |||||||  || || | |||||||| |||||||||||    
T  34050463 gggtttgtctaacatgtgcaatattgcacatgttaaagcaaccaaaagtaacaaattattattgaaaaacaacaattatt 34050384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 2222375 - 2222254
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaa-acacaaattataaattaaagttactact 201  Q
    ||||||||||||||| |||| |||||||| ||| ||||||| ||||||| ||||  |||||||||| | || |||||| || |||  |||||||| ||      
T  2222375 aactaaaagtagtaactttt-attgaaaaacaataattatttattaaaaagctaactatttaatatcataatacacaagttttaagataaagttatta-- 2222279  T
Q  202 ttaaacttcttaacatgtgcaaatt 226  Q
    ||||| ||||||||||||| |||||    
T  2222278 ttaaatttcttaacatgtgtaaatt 2222254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 6520708 - 6520796
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||||| |||||||| ||||||| || |  |||| | |||||||||||  || ||||| ||||||| ||||||||||| |||||||    
T  6520708 aagggtttgtctaacatgtacaatattacacaggttaaagaaactaaaagtaacaacttttc-ttgaaaaacaacaattatttattaaaa 6520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 12947649 - 12947572
Alignment:
Q  149 aaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| |||| ||||||||||||||  ||||| || ||| | |||||||||| ||||||||||||| ||| || |||||    
T  12947649 aaaaactacctatttaatataaaatgcacaagttttaagtcaaagttactaatttaaacttcttaccatatgtaaatt 12947572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 43671742 - 43671795
Alignment:
Q  119 tttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaa 172  Q
    ||||| ||| |||| ||||||||||| |||||||| || |||||||||||||||    
T  43671742 ttttttatttaaaatcaacaattatttattaaaagttatatatttaatataaaa 43671795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 3e-66; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 39757287 - 39757128
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaat 166  Q
    |||||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  39757287 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaatttttcattgaaaatcaacaattattgattaaaagctacatatttaat 39757188  T
Q  167 ataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||  || |||||||||||| ||||||||||||||||||||||||||    
T  39757187 ataaaaaacacaaatttcaagttaaagttactattttaaacttcttaacatgtgcaaatt 39757128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 3562059 - 3561896
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||| ||||| ||||||||||||||||||| || |||||||||||||||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||    
T  3562059 aaggatttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaatcaataattattgattaaaagctacatatt 3561960  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||    
T  3561959 taatataaaaaacacaagttttaagttaaagttactactttaaacttcttaacatgtgcaaatt 3561896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 9331958 - 9332121
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| |||||||||||||||||| | ||||||||    
T  9331958 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaatgttacatatt 9332057  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  || | |||||||||| ||||||||||||||||||||||||||    
T  9332058 taatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatt 9332121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 19889337 - 19889500
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  19889337 aagggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatt 19889436  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  19889437 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatt 19889500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 5909463 - 5909300
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||  ||||||||||||||||||| || |||||| ||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||    
T  5909463 aagggtttgactaacatgtgcaatattgcacatgttaaggcaactaaaagcagtaacttttcattgaaaaccaacaattatttattaaaagctacatatt 5909364  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  5909363 taatataaaaaacacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatt 5909300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 36548636 - 36548478
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaata 167  Q
    ||||| ||||||||||||||||||| || |||||| |||||||||||||||||||| |||||||||||||||||||||||||||   |||||||||||||    
T  36548636 tttgtctaacatgtgcaatattgcacatgttaagggaactaaaagtagtaattttttattgaaaaccaacaattattgattaaatattacatatttaata 36548537  T
Q  168 taaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| ||||||| ||| | |||||||||| ||||||||||||||||||||||||||    
T  36548536 taaaaaatacaaattttaagtcaaagttactaatttaaacttcttaacatgtgcaaatt 36548478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 65 - 210
Target Start/End: Complemental strand, 47120373 - 47120228
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  47120373 gggtttgtctaacatgtgcaatattgcacatgttatggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttacatattta 47120274  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttc 210  Q
    ||||||||||||||| ||  || | |||||||||| ||||||||||    
T  47120273 atataaaaaacacaagttccaagtcaaagttactaatttaaacttc 47120228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 384571 - 384448
Alignment:
Q  103 taactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactt 202  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| ||  || |||||||||||||||    
T  384571 taactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagctacatatttaatataaaaaaaacaagttccaagttaaagttactactt 384472  T
Q  203 taaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||||||||    
T  384471 taaacttcttaacatgtgcaaatt 384448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 64 - 170
Target Start/End: Original strand, 24250311 - 24250417
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattt 163  Q
    ||||||||| ||||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||    
T  24250311 agggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtattaacttttcattgaaaaccaacaattatttattaaaagctacatattt 24250410  T
Q  164 aatataa 170  Q
    |||||||    
T  24250411 aatataa 24250417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 12086109 - 12085949
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaa 165  Q
    ||||||| ||||||||| ||||||||| || |||||| ||||||||||||||| ||||| ||||||| ||||||||||| |||||||| || ||||||||    
T  12086109 ggtttgtctaacatgtgtaatattgcacatgttaaggcaactaaaagtagtaacttttcgttgaaaatcaacaattatttattaaaagttaaatatttaa 12086010  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||| ||  || | ||| |||||  |||||||||||||  |||||||||||    
T  12086009 tataaaaaacacaagtttcaagtcaaaattacttatttaaacttcttattatgtgcaaatt 12085949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 23982936 - 23982773
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagc-tacatatt 162  Q
    ||||||||| ||||||||||||||||  | || |||||| ||||||||||||||| |||||||| |||||||||||||| | ||||||| | || |||||    
T  23982936 agggtttgtctaacatgtgcaatattatacatgttaaggcaactaaaagtagtaacttttcattcaaaaccaacaattaattattaaaaacttaaatatt 23982837  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||| |||||| ||  || | ||||||||||||||||| |||||||| ||||||||||    
T  23982836 taatataaaatacacaagttccaagtcaaagttactactttaaatttcttaacgtgtgcaaatt 23982773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 7169999 - 7170162
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatat 161  Q
    ||||| |||| ||||||||||||||||||| || |||||| |||||||| |||||| |||| ||||||| |||||||||| | |||||||  |||||||     
T  7169999 aagggattgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataa 7170097  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||  ||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  7170098 ttaatataaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatt 7170162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 111 - 226
Target Start/End: Complemental strand, 18102364 - 18102248
Alignment:
Q  111 agtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataa-aaaacacaaattataaattaaagttactactttaaactt 209  Q
    |||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||| ||||||||| ||  || | ||||||| || |||||||||    
T  18102364 agtagtaatttttcattgaaaatcaacaattattgattaaatgttacatatttaatataaaaaaacacaagtttcaagtcaaagttattaatttaaactt 18102265  T
Q  210 cttaacatgtgcaaatt 226  Q
    |||||||||||||||||    
T  18102264 cttaacatgtgcaaatt 18102248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 24463134 - 24462973
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatattt 163  Q
    |||||||| ||||||||| |||||| || || |||||| |||||||||||||||||| | ||||||||| ||||| |||| |||||||  ||||||||||    
T  24463134 gggtttgtctaacatgtgaaatatttcacatgttaaggcaactaaaagtagtaatttcttattgaaaac-aacaagtatttattaaaaaactacatattt 24463036  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||   ||||| | ||| | ||||||| || ||||||||||||||||||||||||||    
T  24463035 aatataaaatgtacaaactttaagtcaaagttattattttaaacttcttaacatgtgcaaatt 24462973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 47457643 - 47457479
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttc-attgaaaaccaacaattattgatt-aaaagctacata 160  Q
    |||| ||||| ||||||||||||||||||| || ||||   ||||||||||||||||||||  ||||||||  |||||||||| ||| |||||||||| |    
T  47457643 aaggatttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaat-aacaattatttatttaaaagctacaca 47457545  T
Q  161 tttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | ||||||||||  || |||||  || | ||||||||||||||||| || ||||||||||||||||    
T  47457544 tataatataaaatgcataaattccaagtcaaagttactactttaaattttttaacatgtgcaaatt 47457479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 19868114 - 19868227
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgat-taaaagctacatatttaa 165  Q
    |||||| ||||||||||||||||||| || |||||  ||||||||||||||| ||||||||||||| || |||||||| ||  ||||| || ||||||||    
T  19868114 gtttgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaaattttcattgaaaaacaccaattatttatcaaaaagttatatatttaa 19868213  T
Q  166 tataaaaaacacaa 179  Q
    ||||||| ||||||    
T  19868214 tataaaatacacaa 19868227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 226
Target Start/End: Complemental strand, 25709570 - 25709417
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaa 172  Q
    ||||||||| ||||||||| || ||||   |||||||||||||||||||| ||||| || ||||||| ||| ||| ||||||||| |||||||||| |||    
T  25709570 taacatgtgaaatattgcacatgttaaatcaactaaaagtagtaattttttattgataaacaacaataatttattaaaaagctacctatttaatatgaaa 25709471  T
Q  173 aacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
       |||| ||  ||   |||||||||| ||||||||||||||||||||||||||    
T  25709470 tgaacaagttccaatacaaagttactattttaaacttcttaacatgtgcaaatt 25709417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 39869119 - 39869228
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||| |||||||||||| || |||| | |||||||| |||||| ||||||||||||||||||||||| | ||| ||||  |||||||    
T  39869119 aagggtttgtctaacatatgcaatattgcacatgttaaagaaactaaaaatagtaacttttcattgaaaaccaacaattaattattaaaaatttacatat 39869218  T
Q  162 ttaatataaa 171  Q
    ||||||||||    
T  39869219 ttaatataaa 39869228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 138 - 226
Target Start/End: Original strand, 8170593 - 8170681
Alignment:
Q  138 aattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||| || ||||||||||||||||| | || || ||| |||||||||||||||||||||| |||||||||| |||||    
T  8170593 aattattgattaaaagttatatatttaatataaaaaataaaagttttaagttaaagttactactttaaactttttaacatgtgtaaatt 8170681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 33342985 - 33343148
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatat 161  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||| ||||||||||||| || |  ||||| || ||||    
T  33342985 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatat 33343083  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  33343084 ttaatacaaaatgttcaagttccaatacaaagttactattttaaatttcttaacatgtgcaaatt 33343148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 12624634 - 12624796
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagc-tacatat 161  Q
    |||||||||| ||| ||||||||||||  | |||||||||||||||||| |||| |||||| ||||||||  | |||||||| ||||||| | |  ||||    
T  12624634 aagggtttgtttaagatgtgcaatattatacatattaaggtaactaaaa-tagttattttttattgaaaaatatcaattatttattaaaaacttgtatat 12624732  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||| |||||| || |||   ||| |||| | |||||| |||||||||||||||||||    
T  12624733 ttaatataaaatacacaagtt-taagacaaacttaccattttaaatttcttaacatgtgcaaatt 12624796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 46290009 - 46290170
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || ||||||||||||||||||| || |||| |||| ||||||||||||| || |  ||||| || ||||||    
T  46290009 gggtttgtctaacatgtgcaaaattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatattt 46290107  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  46290108 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 46290170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 7040433 - 7040270
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatat- 161  Q
    |||||||||| |||||| ||||| ||||||||| |||| |||||||||||  | || | || |||| ||| ||||||||||| |||||||  |  ||||     
T  7040433 aagggtttgtctaacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaattt-atata 7040335  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| |||| |||||| ||  |||| |||  || |||||||||||||||||||||||||||||    
T  7040334 ttaatagaaaatacacaagttccaaatcaaacatagtactttaaacttcttaacatgtgcaaatt 7040270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 42750289 - 42750443
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaa 165  Q
    |||||| |||||||||||||||||||||| |||| | |||||||| || ||| |||| |||||||| ||| ||||||| ||| ||||| ||||  |||||    
T  42750289 gtttgtttaacatgtgcaatattgcatatgttaaagcaactaaaaataataactttttattgaaaa-caataattatttattaaaaagttacaattttaa 42750387  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||  || ||     || | |||| ||||||||||||||||||||||| ||||||||    
T  42750388 tataaaatgcaaaa-----aagtcaaagctactactttaaacttcttaacatatgcaaatt 42750443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 32117811 - 32117974
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||| | ||||||||||||||||||| || |||||| ||||||| |||| || ||| ||||| ||| || ||||||||  | ||||| ||  ||||    
T  32117811 aagggtttatctaacatgtgcaatattgcacatgttaaggaaactaaatgtagcaactttgcattggaaaacaccaattattattaaaaagttatctatt 32117910  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| || | |||| ||  ||  |||| || | |||||||| |||||||||||||||||||    
T  32117911 taatatagaatatacaagtttcaagataaacttgccactttaaatttcttaacatgtgcaaatt 32117974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 77 - 171
Target Start/End: Original strand, 24699146 - 24699240
Alignment:
Q  77 catgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatta-aaagctacatatttaatataaa 171  Q
    |||| ||||||||||| || |||||   ||||||| |||||| ||||||||||||| ||||||||||| |||| |||| |||||||||||||||||    
T  24699146 catgagcaatattgcacatgttaagactactaaaa-tagtaacttttcattgaaaaacaacaattatttattataaagttacatatttaatataaa 24699240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 34270262 - 34270421
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatat 161  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||    || |||| |||| ||||||||||||| || |  ||||| || ||||    
T  34270262 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaag----aagtttttattg-aaaccaacaattatttaacaaaaagttatatat 34270356  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  34270357 ttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 34270421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 7899617 - 7899504
Alignment:
Q  114 agtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    ||||||||||||||||||| || |||| ||| ||||||| | || ||||||||||||||| | |||| ||||||   ||| |||| | |||||| || ||    
T  7899617 agtaatttttcattgaaaaacaccaataatttattaaaatgttatatatttaatataaaatatacaagttataagacaaacttaccattttaaatttttt 7899518  T
Q  213 aacatgtgcaaatt 226  Q
    ||||||||||||||    
T  7899517 aacatgtgcaaatt 7899504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 226
Target Start/End: Complemental strand, 41331551 - 41331474
Alignment:
Q  149 aaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| |||||||||||||||||||  ||||| ||  || | ||||||||||||||||| |||||| ||||||||||||    
T  41331551 aaaacctacatatttaatataaaatgcacaagttccaagtcaaagttactactttaaatttcttatcatgtgcaaatt 41331474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 152
Target Start/End: Original strand, 12650831 - 12650906
Alignment:
Q  77 catgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||||||||| | || |||||  |||||||| |||||| |||||||||||||| | |||||||| |||||||    
T  12650831 catgtgcaatattgtacatgttaagccaactaaaaatagtaacttttcattgaaaactaccaattatttattaaaa 12650906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 226
Target Start/End: Original strand, 5833438 - 5833515
Alignment:
Q  149 aaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||||| ||  ||||| || |||    |||||||| |||||||||| ||||||||||||||||    
T  5833438 aaaagctacatatttaatatagaatgcacaagttctaagacgaagttactgctttaaactttttaacatgtgcaaatt 5833515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 44806930 - 44807019
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||||| ||| |||||||||||| || || |||||  |  ||||||||||| ||||||| |||||| ||| ||||||| |||||||    
T  44806930 aagggtttgtctaatatgtgcaatattacacatgttaagacatttaaaagtagtattttttcactgaaaaacaataattatttattaaaa 44807019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 22334075 - 22334039
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||||||||||||||| ||||||    
T  22334075 aaagttactactttaaacttcttaacatgtacaaatt 22334039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 24639539 - 24639658
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||||| |||| || |||| |||| ||||| | | | ||||| ||||| || ||||||||||| ||| ||||  |||||||    
T  24639539 aagggtttgtctaacatgtgcaata-tgcacatgttaaagtaattaaaaatggaatttttttattgacaaacaacaattattcattaaaaatatacatat 24639637  T
Q  162 ttaatataaaaaacacaaatt 182  Q
    ||||||| | | |||||||||    
T  24639638 ttaatattatatacacaaatt 24639658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 8091453 - 8091330
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactactt 202  Q
    |||||||||||| || |||| |||||||| ||| ||||||| ||||||| | || |||||||| | ||||   | || ||| ||   |||||||||| ||    
T  8091453 aactaaaagtagcaaatttttattgaaaatcaataattatttattaaaaagttatatatttaacacaaaatgtaaaagttacaatgcaaagttactattt 8091354  T
Q  203 taaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||| |||||    
T  8091353 taaacttcttaacatgtgtaaatt 8091330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 26300573 - 26300731
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaat 166  Q
    |||||| ||||||||| |||||||||||| ||||   ||||||||||| ||||| |  ||||||||  || ||  |||  | ||||| || | |||||||    
T  26300573 gtttgtctaacatgtgtaatattgcatatgttaaaacaactaaaagtattaattctgtattgaaaaaaaaaaaa-attattaaaaagttatacatttaat 26300671  T
Q  167 ataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | |||| | |||| ||  || | |||||||||| ||||||||| ||||||||||||||||    
T  26300672 acaaaatatacaagtttcaattcaaagttactattttaaactttttaacatgtgcaaatt 26300731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 45501457 - 45501536
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||| |||||||||||| |||||| || ||||  ||||||| |||||||| ||||  || |||| |||||||||||    
T  45501457 gggtttgtctaacatgtgcaacattgcacatgttaaaataactaatagtagtaactttttcttaaaaaacaacaattatt 45501536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 27300428 - 27300534
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaa-tttttcattgaaaaccaacaattattgatt-aaaagctacatatttaa 165  Q
    ||||| ||| |||||||||||||||||| ||||     ||||||||||||| ||||| |||||||| ||  || |||| ||| |||| ||||||||||||    
T  27300428 tttgtctaatatgtgcaatattgcatatgttaaatcttctaaaagtagtaatttttttattgaaaaacattaactatttattaaaaatctacatatttaa 27300527  T
Q  166 tataaaa 172  Q
    |||||||    
T  27300528 tataaaa 27300534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 29398296 - 29398227
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||||||| |||||||||||| |||||| || ||||   |||||| | || |||||||||||||||||    
T  29398296 aagggtttgtctaacatgtgcaacattgcacatgttaaaacaactaataatactaatttttcattgaaaa 29398227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 4161878 - 4161938
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaattttt 123  Q
    |||||| ||| ||||||||| ||||||||| || |||| | ||||||||||||||| ||||    
T  4161878 aagggtatgtctaacatgtgtaatattgcacatgttaaaggaactaaaagtagtaactttt 4161938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 8420919 - 8420851
Alignment:
Q  158 atatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| |||||| ||||||  |||| |||| | |||||| || ||||||||| ||||||    
T  8420919 atatttaatataaaagacacaagttataagataaacttaccattttaaattttttaacatgtacaaatt 8420851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 8594998 - 8595057
Alignment:
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||| ||  || ||||||| |||| |||||||||||||||||||| |||||    
T  8594998 tataaaaaacacaagttccaagttaaagtcacta-tttaaacttcttaacatgtgtaaatt 8595057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 24250622 - 24250658
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||||||||| ||||| ||||||    
T  24250622 aaagttactactttaaacttcttatcatgttcaaatt 24250658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 126; Significance: 4e-65; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 10129102 - 10129263
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10129102 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 10129201  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| ||  || ||||| |||||||||||||||||||||||||||||||||    
T  10129202 atataaaaaacacaagttccaagttaaaattactactttaaacttcttaacatgtgcaaatt 10129263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 13328122 - 13327959
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||||    
T  13328122 aagggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaatgttacatatt 13328023  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  || | |||||||||| ||||||||||||||||||||||||||    
T  13328022 taatataaaaaacacaagtttcaagtcaaagttactaatttaaacttcttaacatgtgcaaatt 13327959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 40211002 - 40210839
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||||    
T  40211002 aagggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtattaacttttcattgaaaaccaacaattattgattaaatgttacatatt 40210903  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||||  || | |||||||||| ||||||| ||||||||||||||||||    
T  40210902 taatataaaaaacacaaattcaaagtcaaagttactaatttaaacgtcttaacatgtgcaaatt 40210839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 7140638 - 7140477
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||| |||||||||||    
T  7140638 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaaactacatattta 7140539  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| ||  || ||||| ||||||||||||||||||||| |||||||||||    
T  7140538 atataaaaaacacaagttccaagttaaaattactactttaaacttcttaatatgtgcaaatt 7140477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 39701984 - 39701821
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||| ||||| ||||||||||||||||||| || |||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||| ||||||||    
T  39701984 aaggatttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttgaaaaccaacaattactaattaaaagttacatatt 39701885  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||||  || | |||||||||||||||||||| ||||||||||||||||    
T  39701884 taatataaaaaacacaaatttcaagtcaaagttactactttaaacttgttaacatgtgcaaatt 39701821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 9801678 - 9801828
Alignment:
Q  76 acatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaac 175  Q
    ||||||||||||||| | ||||||| |||| |||||||||||| ||||||||||||| |||||||||||||||||||| || ||||||||||||| ||||    
T  9801678 acatgtgcaatattgtacatattaaagtaattaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttatatatttaatataacaaac 9801777  T
Q  176 acaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | || ||  || | |||||||||||||||||||||||||||||||||||||    
T  9801778 ataagtttcaagtcaaagttactactttaaacttcttaacatgtgcaaatt 9801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 8140598 - 8140727
Alignment:
Q  97 ttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagtta 196  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| ||| | ||| |||    
T  8140598 ttaaggcaactaaaagtagtgatttttcattgaaaaccaacaattatttattaaaagctacatatttaatataaaaaacataaattttaagtcaaaatta 8140697  T
Q  197 ctactttaaacttcttaacatgtgcaaatt 226  Q
     |||||||| ||||||||||||||||||||    
T  8140698 ttactttaatcttcttaacatgtgcaaatt 8140727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 19344017 - 19343854
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattt 163  Q
    ||||||||| | ||||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||    
T  19344017 agggtttgtcttacatgtgcaatattgcacatgttaaggtaaccaaaagtagtaacttttcattgaaaaccaacaattattgagtaaaagttacatattt 19343918  T
Q  164 aata-taaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||||| |||| ||  || | ||| |||||||||||||| | ||||||||||||||||    
T  19343917 aatattaaaaaatacaagtttcaagtcaaaattactactttaaacgtgttaacatgtgcaaatt 19343854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 218
Target Start/End: Original strand, 9743861 - 9744013
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaa 165  Q
    ||||||| |||||||||||||||||   || |||||  |||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||    
T  9743861 ggtttgtctaacatgtgcaatattgtgcatgttaagacaactaaaagtagtaattttttattgaaaaccaacaattatttattaaaagttacatatttaa 9743960  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatg 218  Q
    ||||||||||| || ||  || | |||||||||||||||||||||||| ||||    
T  9743961 tataaaaaacataagttccaagtcaaagttactactttaaacttcttatcatg 9744013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 1203602 - 1203761
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaat 166  Q
    |||||| |||||| |||||||||||| |||||||| |||||||||  ||||| |||||||||||||| || ||||||| |||||  | ||||||||||||    
T  1203602 gtttgtctaacatatgcaatattgcacatattaagataactaaaaaaagtaacttttcattgaaaacaaataattattaattaactgttacatatttaat 1203701  T
Q  167 ataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||| || | ||| ||| |||||||||||||||||||| ||||||||||||    
T  1203702 ataaaaaacacaagtttttaatcaaaattactactttaaacttcttatcatgtgcaaatt 1203761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 65 - 213
Target Start/End: Original strand, 38527819 - 38527971
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaac----aattattgattaaaagctacata 160  Q
    |||||||| ||||||||||||||||||| || |||||| ||||||||||| ||| ||||||||||||||||||    | ||||| |||||||||||||||    
T  38527819 gggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacgattatttatttattaaaagctacata 38527918  T
Q  161 tttaatataaaaaacacaaattataaattaaagttactactttaaacttctta 213  Q
    ||||||||||||||||||||||  |||| ||| ||| ||||||||||||||||    
T  38527919 tttaatataaaaaacacaaattccaaatcaaaattattactttaaacttctta 38527971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 14816307 - 14816144
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| ||||||||||||||||||| || |||| | ||||||||||||||| |||| |||||||||||||||||| | ||| ||||  |||||||    
T  14816307 aagggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatat 14816208  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| ||| |||||| || ||| | ||||||||||||||||| |||||| ||||||||||||    
T  14816207 ttaatat-aaatacacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatt 14816144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 14829433 - 14829596
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| ||||||||||||||||||| || |||| | ||||||||||||||| |||| |||||||||||||||||| | ||| ||||  |||||||    
T  14829433 aagggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaactttttattgaaaaccaacaattaattattaaaaatttacatat 14829532  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| ||| |||||| || ||| | ||||||||||||||||| |||||| ||||||||||||    
T  14829533 ttaatat-aaatacacaagttttaagtcaaagttactactttaaatttcttatcatgtgcaaatt 14829596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 35678452 - 35678293
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaa 165  Q
    |||||| ||||||||||||||||||| || |||| | ||||||||||||||| ||||||||||||||||||||||| | ||| ||||  |||||||||||    
T  35678452 gtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatatttaa 35678353  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||| ||| |||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  35678352 tat-aaatacacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatt 35678293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 107 - 226
Target Start/End: Complemental strand, 18567553 - 18567434
Alignment:
Q  107 taaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaa 206  Q
    ||||||| |||| |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||  ||  || | |||||||||| ||||||    
T  18567553 taaaagtggtaacttttcattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacatgttccaagtcaaagttactaatttaaa 18567454  T
Q  207 cttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||||    
T  18567453 cttcttaacatgtgcaaatt 18567434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 26682068 - 26682228
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttc-attgaaaaccaacaattattgattaaaa-gctacatattta 164  Q
    |||||| ||||||||||||||||||| || ||||   ||||||||||||||||||||  ||||||||| |||||||||| ||||||| |||||| |||||    
T  26682068 gtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagtaatttttttattgaaaac-aacaattatttattaaaaagctacacattta 26682166  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||  ||||| ||  || | ||||||||||||||||| |||||||||||||||||||    
T  26682167 atataaaatgcacaagttccaagtcaaagttactactttaaatttcttaacatgtgcaaatt 26682228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 174
Target Start/End: Original strand, 39703450 - 39703561
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||| ||||| |||| |||||||||||||| || |||||||||||||||||||||| ||||| || ||||||||||||||  | ||||||| ||||||||    
T  39703450 aaggatttgtctaacgtgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcgttaaaaaccaacaattacgggttaaaagttacatatt 39703549  T
Q  163 taatataaaaaa 174  Q
    ||||||||||||    
T  39703550 taatataaaaaa 39703561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 4080573 - 4080412
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagct-acatattt 163  Q
    |||||||| ||||||||| ||||||||| || |||||| || |||||||||||| |||||||||||||| |||||||| | | |||||  | ||||||||    
T  4080573 gggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatattt 4080474  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||   ||||| ||  || | ||||||||||||||||| |||||| ||||||||||||    
T  4080473 aatataaatg-cacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatt 4080412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 31812111 - 31812273
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || ||||| || |||||||||||||||||| ||||||||  || | ||||| ||| |||||||||||||||    
T  31812111 gggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaataaaacttatttattaaaaagctacatattt 31812210  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||  ||||| ||  || | ||| |||| | |||||||||||||| |||||||||||    
T  31812211 aatatgaaatgcacaagttccaagtcaaaattaccattttaaacttcttaatatgtgcaaatt 31812273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 148 - 226
Target Start/End: Complemental strand, 45519658 - 45519580
Alignment:
Q  148 taaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||||||||||||||||| ||  || |||||||||||||||||||||||||| ||||||||||||    
T  45519658 taaaagctacatatttaatataaaaaacacaagttccaagttaaagttactactttaaacttcttatcatgtgcaaatt 45519580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 44091360 - 44091478
Alignment:
Q  108 aaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaaattataaattaaagttactactttaaa 206  Q
    ||||||| |||||||| ||||||||| |||||||||| |||||||  ||||| |||||||||||||  ||||| || ||||| |||||||||||||||||    
T  44091360 aaaagtattaattttttattgaaaac-aacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaa 44091458  T
Q  207 cttcttaacatgtgcaaatt 226  Q
     |||||||||| ||||||||    
T  44091459 tttcttaacatatgcaaatt 44091478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 4084722 - 4084561
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatt-attgattaaaagctacatattt 163  Q
    |||||||| ||||||||| ||||||||| || |||||| || |||||||||||| |||||||||||||| ||||||| |||  | ||||  |||||||||    
T  4084722 gggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatattt 4084623  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||  || || ||  || | ||||||||||||||||| |||||| ||||||||||||    
T  4084622 aatat-aaatgcataagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatt 4084561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 4103029 - 4102868
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatt-attgattaaaagctacatattt 163  Q
    |||||||| ||||||||| ||||||||| || |||||| || |||||||||||| |||||||||||||| ||||||| |||  | ||||  |||||||||    
T  4103029 gggtttgtctaacatgtgtaatattgcacatgttaaggaaagtaaaagtagtaacttttcattgaaaactaacaattaattactaaaaatttacatattt 4102930  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||  || || ||  || | ||||||||||||||||| |||||| ||||||||||||    
T  4102929 aatat-aaatgcaaaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatt 4102868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 3306236 - 3306156
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||||||||||    
T  3306236 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaaccaacaattatt 3306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 8284749 - 8284586
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa--gctacatatt 162  Q
    |||||||| ||||||||||| ||||||| || |||| | ||||||||||||||| |||| ||| ||||  |||||||||| |||||||   | || ||||    
T  8284749 gggtttgtctaacatgtgcagtattgcacatgttaaagcaactaaaagtagtaactttttattaaaaaagaacaattatttattaaaaagaccacctatt 8284650  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||| |||||| ||  || |  ||||| ||| ||||||||||||||||||| ||||||    
T  8284649 taatataaaatacacaagttccaagtcgaagttgctaatttaaacttcttaacatgtacaaatt 8284586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 39025002 - 39024875
Alignment:
Q  99 aaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaaattataaattaaagttac 197  Q
    |||| ||||||||||| ||| |||| ||||||| |||||||||| | |||||||  ||||||| |||||||||||  ||||||||  || | ||||||||    
T  39025002 aaggcaactaaaagtaataactttttattgaaa-ccaacaattaattattaaaaatctacatagttaatataaaatgcacaaattccaagtcaaagttac 39024904  T
Q  198 tactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||| ||||||||||||    
T  39024903 tactttaaacttcttatcatgtgcaaatt 39024875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 2161384 - 2161464
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||| |||||||||||||||    
T  2161384 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatt 2161464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 26834558 - 26834721
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatt 162  Q
    ||||||||| |||||| ||||| |||||| ||  |||| || |||||||||||||||||| |||||||| ||| | ||||| ||| ||||||||||||||    
T  26834558 agggtttgtctaacatatgcaacattgcacatgctaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatt 26834657  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| |||  ||||| ||  || | ||| |||| | |||||| ||||||| || ||||||||    
T  26834658 taatatgaaatgcacaagttccaagtcaaaattaccattttaaatttcttaatatatgcaaatt 26834721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 6818013 - 6818102
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||||| ||||||||||||||||| |||| |||| | |||||||| |||||| ||| |||||||||  |||||||||| |||||||    
T  6818013 aagggtttgtctaacatgtgcaatattgtatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaa 6818102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 97 - 174
Target Start/End: Original strand, 45516319 - 45516395
Alignment:
Q  97 ttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaa 174  Q
    ||||| |||||||||||||||| |||| ||||||| | |||||||||| |||||||||||||||||||||||| ||||    
T  45516319 ttaagataactaaaagtagtaactttttattgaaa-ctaacaattatttattaaaagctacatatttaatatataaaa 45516395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 226
Target Start/End: Original strand, 31451420 - 31451484
Alignment:
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||| ||  || ||||||||||||||||||||||||||||| |||||||||    
T  31451420 ttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacacgtgcaaatt 31451484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 35746070 - 35745982
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaa 151  Q
    |||||||||| ||||||||||||||||| |  | |||| ||||||||||| | ||| |||||||||||||| |||||||||| ||||||    
T  35746070 aagggtttgtctaacatgtgcaatattgaaattgttaaagtaactaaaagaaataacttttcattgaaaacaaacaattattaattaaa 35745982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 223
Target Start/End: Original strand, 12131981 - 12132140
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || |||| | |||||||||||| || |||| |||||||| | |||| |||| ||| ||||| || ||||||    
T  12131981 gggtttgtctaacatgtgcaacattgcacatgttaaagaaactaaaagtagcaactttttattgaaaaaccacaagtatttattaaaaagttatatattt 12132080  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaa 223  Q
    |||||||||    ||| ||  ||   ||| ||||||||||||| ||||||||||||||||    
T  12132081 aatataaaatgttcaagttccaatacaaacttactactttaaatttcttaacatgtgcaa 12132140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 225
Target Start/End: Original strand, 39430522 - 39430645
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaa--caattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactact 201  Q
    ||||||||||||||| |||| ||||||||  ||  |||||||| |||||||  || | ||||||||||||| | | ||||| |||  ||||||||||| |    
T  39430522 aactaaaagtagtaagttttgattgaaaaaaaaaacaattatttattaaaaattatacatttaatataaaatatataaattttaatataaagttactatt 39430621  T
Q  202 ttaaacttcttaacatgtgcaaat 225  Q
    | |||||| |||||||||||||||    
T  39430622 taaaactttttaacatgtgcaaat 39430645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 144
Target Start/End: Complemental strand, 26364160 - 26364091
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    ||||||||||||||||||| || ||||||||||||||||||| || |||| ||| |||| |||||||||||    
T  26364160 taacatgtgcaatattgcacatgttaaggtaactaaaagtagaaagtttttatt-aaaatcaacaattatt 26364091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 33514682 - 33514593
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||||  ||||||||||||||||||| || |||||| |||||||||||| ||  ||| |||||||| ||||||  ||| |||||||    
T  33514682 aagggtttgcctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaaccttttattgaaaaacaacaaccatttattaaaa 33514593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 179
Target Start/End: Original strand, 34249675 - 34249791
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt--aaaagctacatatt 162  Q
    |||||||| ||||||||||||| ||| | ||  ||||  | ||||||||| ||||||||||||||||| ||  ||||||| |||  ||||| || |||||    
T  34249675 gggtttgtctaacatgtgcaatgttgtacatgataagacagctaaaagtattaatttttcattgaaaaacactaattatttattaaaaaagttaaatatt 34249774  T
Q  163 taatataaaaaacacaa 179  Q
    |||||||||| ||||||    
T  34249775 taatataaaatacacaa 34249791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 13496912 - 13496824
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaact-aaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||| ||||||||||||||||||| || |||| | |||| |||| |||||| ||| |||||||||  |||||||||| |||||||    
T  13496912 gggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaaatagtaactttacattgaaaaagaacaattatttattaaaa 13496824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 172
Target Start/End: Original strand, 20514628 - 20514739
Alignment:
Q  63 aagggtttgtgtaacatgtgcaa-tattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacata 160  Q
    |||||||||| |||||||||||| ||||||| ||  ||| | |||| ||||||||||||| | ||||||||  | |||||||| ||| ||||| || |||    
T  20514628 aagggtttgtctaacatgtgcaaatattgcacatggtaaagcaacttaaagtagtaatttcttattgaaaaataccaattatttattaaaaagttatata 20514727  T
Q  161 tttaatataaaa 172  Q
    ||||||||||||    
T  20514728 tttaatataaaa 20514739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 155 - 225
Target Start/End: Complemental strand, 35741018 - 35740948
Alignment:
Q  155 tacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaat 225  Q
    |||||||||||||||||||||||||||| | | | ||| ||||||| ||||| || ||| |||||||||||    
T  35741018 tacatatttaatataaaaaacacaaatttttagtcaaaattactacattaaaatttttatcatgtgcaaat 35740948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 7393375 - 7393263
Alignment:
Q  114 agtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    |||| |||||| ||||||| || |||||||| ||||||| | || ||||||||||||||| |||||| ||| ||   ||| |||||| |||||| || ||    
T  7393375 agtagtttttcgttgaaaaacaccaattatttattaaaaagttatatatttaatataaaatacacaagttacaagacaaa-ttactattttaaatttttt 7393277  T
Q  213 aacatgtgcaaatt 226  Q
    ||||||||||||||    
T  7393276 aacatgtgcaaatt 7393263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 225
Target Start/End: Complemental strand, 34405122 - 34405085
Alignment:
Q  188 ttaaagttactactttaaacttcttaacatgtgcaaat 225  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  34405122 ttaaagttattactttaaacttcttaacatgtgcaaat 34405085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 226
Target Start/End: Complemental strand, 10974725 - 10974576
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaa 172  Q
    |||||| |||| ||||| |||| |||| | |||||||||||||||  ||| |||||||| ||| || |||| ||| ||||  ||||||||||||||||||    
T  10974725 taacatatgcactattgtatatgttaaagcaactaaaagtagtaacattttattgaaaaacaataactatttattaaaaaattacatatttaatataaaa 10974626  T
Q  173 aacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
       |||    | ||  ||||||||||| ||||||||| |||||||||| |||||    
T  10974625 tgtaca----agaagataaagttactaatttaaactttttaacatgtgtaaatt 10974576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 133
Target Start/End: Original strand, 7750667 - 7750734
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaac 133  Q
    ||||||| ||||||||||||||||||| || ||||   |||||||||||| || |||| |||||||||    
T  7750667 ggtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagtagcaactttttattgaaaac 7750734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 9824953 - 9825024
Alignment:
Q  61 acaagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||||||||| |||||| |||||||||| |||| |||| | || ||||| |||||| |||| ||||||||    
T  9824953 acaagggtttgtctaacatatgcaatattgtatatgttaatgcaattaaaattagtaactttttattgaaaa 9825024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 36967251 - 36967088
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatt 162  Q
    ||||||||| |||||||||||| |||| | || |||||  |||||| |||||||| ||||  ||| ||| ||||||||||  ||| ||||| |  |||||    
T  36967251 agggtttgtctaacatgtgcaacattgtacatgttaagacaactaatagtagtaactttttcttggaaaacaacaattatatattcaaaagttttatatt 36967152  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| |||    ||| ||  ||   |||||| ||| ||||||||||||||||||||||||||    
T  36967151 taatattaaatgtgcaagtttcaatacaaagtttctattttaaacttcttaacatgtgcaaatt 36967088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 168
Target Start/End: Original strand, 38843701 - 38843806
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatt 162  Q
    ||||||||| |||||||||||| |||||| || ||||   |||||| |||||||| ||||  ||| ||| ||||||||||| ||| ||||| |  |||||    
T  38843701 agggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatatt 38843800  T
Q  163 taatat 168  Q
    ||||||    
T  38843801 taatat 38843806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 297219 - 297255
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| || ||||||||||||||||||||||||||    
T  297219 aaagttattattttaaacttcttaacatgtgcaaatt 297255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 2161511 - 2161547
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||| |||||| |||||||||||||||||||    
T  2161511 aaagttactattttaaatttcttaacatgtgcaaatt 2161547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Complemental strand, 3306109 - 3306073
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||| |||||| |||||||||||||||||||    
T  3306109 aaagttactattttaaatttcttaacatgtgcaaatt 3306073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 45005968 - 45006072
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || ||||   |||||| |||||||| ||||  ||| ||| ||||||||||| ||| ||||| |  ||||||    
T  45005968 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttggaaaacaacaattatttattcaaaagttttatattt 45006067  T
Q  164 aatat 168  Q
    |||||    
T  45006068 aatat 45006072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 7e-64; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 2830862 - 2830699
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||| ||||| |||||||| || ||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2830862 aaggatttgtctaacatgtacagtattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagctacatatt 2830763  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  2830762 taatataaaaaacacaaattctaaattaaagttattattttaaacttcttaacatgtgcaaatt 2830699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 5363071 - 5362925
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaa 165  Q
    ||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  5363071 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaa 5362972  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    |||||||||||||| ||  || |||||||||||||||||||||||||    
T  5362971 tataaaaaacacaagttccaagttaaagttactactttaaacttctt 5362925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 214
Target Start/End: Complemental strand, 22974731 - 22974603
Alignment:
Q  86 tattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattata 185  Q
    ||||||| || |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||  |    
T  22974731 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttcca 22974632  T
Q  186 aattaaagttactactttaaacttcttaa 214  Q
    | |||||||||||| ||||||||||||||    
T  22974631 agttaaagttactattttaaacttcttaa 22974603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 86 - 214
Target Start/End: Original strand, 23813670 - 23813798
Alignment:
Q  86 tattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattata 185  Q
    ||||||| || |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||  |    
T  23813670 tattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaatcaacaattattgattaaaagttacatatttaatataaaaaacacaagttcca 23813769  T
Q  186 aattaaagttactactttaaacttcttaa 214  Q
    | |||||||||||| ||||||||||||||    
T  23813770 agttaaagttactattttaaacttcttaa 23813798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 88 - 226
Target Start/End: Complemental strand, 31069738 - 31069600
Alignment:
Q  88 ttgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaa 187  Q
    ||||| || |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||  ||     
T  31069738 ttgcacatgttaaggtaactaaaagtagtaagtttttattgaaaaccaacaattattgattaaatgttacatatttaatataaaaaacacaagttccaag 31069639  T
Q  188 ttaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | |||||||||| |||||||||||||||||||| |||||    
T  31069638 tcaaagttactaatttaaacttcttaacatgtgtaaatt 31069600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 69 - 226
Target Start/End: Original strand, 10887031 - 10887189
Alignment:
Q  69 ttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaata 167  Q
    |||| |||||||||||| |||||| || ||||| || |||||||||||||||||| |||||||| ||| | ||||| ||||||| |||||||||||||||    
T  10887031 ttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatatttaata 10887130  T
Q  168 taaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||||| ||  |||| ||| |||| ||||||||||||||||||||||||||||    
T  10887131 taaaatacacaagttccaaatcaaaattaccactttaaacttcttaacatgtgcaaatt 10887189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 1017956 - 1017796
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatat-attaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagct-acatattta 164  Q
    |||||| |||||||||||||| |||| || |||||  |||||||||||||||| ||||| ||||||||||||||||||| |||||||  | |||||||||    
T  1017956 gtttgtctaacatgtgcaatactgcacatgattaaa-taactaaaagtagtaacttttcgttgaaaaccaacaattatttattaaaaatttacatattta 1017858  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||  ||||| ||  || | ||||||||||||||||||||||||||||||| |||||    
T  1017857 atataaaatgcacaactttcaagtcaaagttactactttaaacttcttaacatgtgtaaatt 1017796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 31568109 - 31568269
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||| ||||||||||||| || |||||||||  || |||||    |||| |||||||| |||||||| ||  | ||||||||||||||    
T  31568109 aagggtttgtctaacacgtgcaatattgcacatgttaaggtaatcaagagtagc---tttttattgaaaatcaacaatttttattcaaaagctacatatt 31568205  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    || |||||||||||||| ||  |||| |||||||||||||||||||| ||||||||||||||||    
T  31568206 tattataaaaaacacaagtttcaaatcaaagttactactttaaactttttaacatgtgcaaatt 31568269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 26602612 - 26602523
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| | |||||||    
T  26602612 aagggtttgtctaacatgtgcaatattgcacatattaaggaaactaaaagtagtaatttttcactgaaaaccaacaattaattattaaaa 26602523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 8977646 - 8977484
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| ||||||||||||||||||| || |||||| |||||||||||| ||  ||| |||||||| ||||||| ||| ||| ||||| |||||||||    
T  8977646 gggtttgtctaacatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatattt 8977547  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||  ||||| ||| ||   ||| |||||| ||| |||||||||||| |||||||||    
T  8977546 aatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaagtgcaaatt 8977484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 67 - 164
Target Start/End: Complemental strand, 32615640 - 32615540
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagta---gtaatttttcattgaaaaccaacaattattgattaaaagctacatattt 163  Q
    |||||| ||||||||| |||||||||||| ||||||||||||||||||   |||| ||||||||||||| || |||||||||||||||||||||||||||    
T  32615640 gtttgtttaacatgtgtaatattgcatatgttaaggtaactaaaagtactagtaacttttcattgaaaatcatcaattattgattaaaagctacatattt 32615541  T
Q  164 a 164  Q
    |    
T  32615540 a 32615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 31169945 - 31169781
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagc-tacatat 161  Q
    |||| ||||| |||| |||||||  ||||| || ||||||  ||||||| |||||||||||| ||||||||||| ||||| | ||||||| | |||||||    
T  31169945 aaggatttgtctaacctgtgcaaacttgcacatgttaaggctactaaaaatagtaatttttctttgaaaaccaataattaattattaaaaacctacatat 31169846  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||  ||||| ||  || | ||||||||||||||||| || ||||||||||||||||    
T  31169845 ttaatataaaatgcacaagttccaagtcaaagttactactttaaatttgttaacatgtgcaaatt 31169781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 6016852 - 6017016
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||| |||||| ||  ||||  | ||||||||||||| ||||||||||||| ||||| |||||  || ||||| || ||||    
T  6016852 aagggtttgtctaacatgtgcaacattgcacatggtaagacatctaaaagtagtaacttttcattgaaaaacaacacttattttttaaaaagttatatat 6016951  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||  ||||| ||  || | |||||||| ||||||||||| ||||||||||||||||    
T  6016952 ttaatatgaaatgcacaagttccaagtcaaagttaccactttaaactttttaacatgtgcaaatt 6017016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 18332870 - 18332706
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||| |||||| || ||||| || |||||||||||||||||| |||||||| ||| | ||||| ||| |||||||| ||||    
T  18332870 aagggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctatatat 18332771  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||  || || ||  || | ||| |||  |||||||||||||||||||||| |||||    
T  18332770 ttaatatgaaatgcataagttccaagtcaaaattatcactttaaacttcttaacatgtgaaaatt 18332706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 14228306 - 14228144
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatatt 162  Q
    ||||||||| ||||||||||||||||||| || ||||||||| ||||||||| || |||| |||| ||||||||||||| || |  ||||| || |||||    
T  14228306 agggtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatt 14228208  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  14228207 taatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 14228144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 28943948 - 28943787
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattt 163  Q
    |||||||| ||||||||||||||||||| || ||||||||| ||||||||| || |||| |||| ||||||||||||| || |  ||||| || ||||||    
T  28943948 gggtttgtctaacatgtgcaatattgcacatgttaaggtaattaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatattt 28943850  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  28943849 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 28943787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 226
Target Start/End: Original strand, 17596385 - 17596501
Alignment:
Q  110 aagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaaattataaattaaagttactactttaaact 208  Q
    ||||||||| |||| ||||||| |||||||||| | |||||||  ||||||| |||||||||||  ||||| ||  |||| |||||||||||||||||||    
T  17596385 aagtagtaactttttattgaaa-ccaacaattaattattaaaaatctacatagttaatataaaatgcacaagttccaaatcaaagttactactttaaact 17596483  T
Q  209 tcttaacatgtgcaaatt 226  Q
    ||||| ||||| ||||||    
T  17596484 tcttatcatgtacaaatt 17596501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 33017721 - 33017801
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||| ||| || |||| ||| ||||||||||||||||    
T  33017721 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaattagcaagtttttatt-aaaaccaacaattatt 33017801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 3850582 - 3850654
Alignment:
Q  97 ttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatata 169  Q
    |||||| |||||||||||| || ||||||||||||| ||| ||||||| |||||||| |||||||||||||||    
T  3850582 ttaaggcaactaaaagtagcaacttttcattgaaaatcaataattattcattaaaagttacatatttaatata 3850654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 17552767 - 17552688
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| || | |||||||||||||||    
T  17552767 agggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatcg-aaaccaacaattatt 17552688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 152
Target Start/End: Complemental strand, 29863484 - 29863395
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||||| ||||||||||||||||||| || |||| | |||||||| |||||| ||| |||||||||  || ||||||| |||||||    
T  29863484 aagggtttgtctaacatgtgcaatattgcacatgttaaaggaactaaaaatagtaactttacattgaaaaagaataattatttattaaaa 29863395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 197
Target Start/End: Original strand, 34300379 - 34300493
Alignment:
Q  83 caatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaatataaaaaacacaaat 181  Q
    |||||||||| |||||||   || ||||||| |||| |||| || ||||| ||| ||||||| ||| |||||||||||||||||||||||||||||| ||    
T  34300379 caatattgcacatattaaaccaattaaaagtggtaacttttgat-gaaaatcaataattatttatttaaaagctacatatttaatataaaaaacacatat 34300477  T
Q  182 tataaattaaagttac 197  Q
    |  |||| ||||||||    
T  34300478 ttcaaatcaaagttac 34300493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 67 - 133
Target Start/End: Original strand, 12454066 - 12454132
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaac 133  Q
    |||||||||||||||||||||||||| || |||||  || |||| |||||||||||| |||||||||    
T  12454066 gtttgtgtaacatgtgcaatattgcacatgttaagaaaattaaatgtagtaattttttattgaaaac 12454132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 2086998 - 2086949
Alignment:
Q  82 gcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaa 131  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||||||    
T  2086998 gcaatattgcacatgttaaggtaattaaaagtagtaatttttcattgaaa 2086949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 31503834 - 31503902
Alignment:
Q  158 atatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||| |||||| ||  ||  |||| ||||||||||||| |||||||||||||||||||    
T  31503834 atatttaatataaaatacacaagttccaatataaacttactactttaaatttcttaacatgtgcaaatt 31503902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 27819807 - 27819645
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagta--atttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||| ||| ||||||||||||||| ||||||| | |||||||| || ||  |||||| ||||||||||||||   ||| ||| ||||| |||||||||    
T  27819807 gtttgtctaagatgtgcaatattgcacatattaaagcaactaaaaatattaacattttttattgaaaaccaacatcaatttattaaaaagttacatattt 27819708  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | |||||||   | || || |||   |||  ||| | ||||||||||||||||||||||||||    
T  27819707 agtataaaatgaataagttttaagacaaaaatacaattttaaacttcttaacatgtgcaaatt 27819645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 31791098 - 31791028
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatatt-aaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||||||| ||||||||||||||||||| || || |||| ||||||| ||||||| |||| ||||||||    
T  31791098 aagggtttgtctaacatgtgcaatattgcacatgttaaaggaaactaaatgtagtaactttttattgaaaa 31791028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 3853067 - 3853103
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| |||||||||||||||||||    
T  3853067 aaagttactactttaaatttcttaacatgtgcaaatt 3853103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 17596309 - 17596369
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaattttt 123  Q
    ||||| |||| ||||||||||||||||||| || |||||  ||||||||||||||| ||||    
T  17596309 aagggattgtctaacatgtgcaatattgcacatgttaagacaactaaaagtagtaactttt 17596369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 107 - 172
Target Start/End: Original strand, 17141315 - 17141381
Alignment:
Q  107 taaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaa 172  Q
    |||||||||| | |||| ||| |||| ||||||| ||| ||||||| ||||||||||||||||||||    
T  17141315 taaaagtagttactttttattaaaaaacaacaataatttattaaaaagctacatatttaatataaaa 17141381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 30623322 - 30623428
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||| ||| || || ||||   |||||| |||||||| ||||  ||||||| ||||||||||| ||| ||||| |  ||||    
T  30623322 aagggtttgtctaacatgtgcaacattacacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaagttttatat 30623421  T
Q  162 ttaatat 168  Q
    |||||||    
T  30623422 ttaatat 30623428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 114
Target Start/End: Complemental strand, 1814960 - 1814912
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagta 114  Q
    ||||||| ||||||||||||||||||| || |||| | |||||||||||    
T  1814960 ggtttgtctaacatgtgcaatattgcacatgttaaagcaactaaaagta 1814912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 29863352 - 29863320
Alignment:
Q  194 ttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| ||||||||||||||||||||||||||    
T  29863352 ttactattttaaacttcttaacatgtgcaaatt 29863320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 198 - 226
Target Start/End: Complemental strand, 32614990 - 32614962
Alignment:
Q  198 tactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||||||||||||||    
T  32614990 tactttaaacttcttaacatgtgcaaatt 32614962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 30328508 - 30328345
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  30328508 aagggtttgtctaacatgtgcaatattgcacatgttaagataactaaaagtagtcatttttcattaaaaaccaacaattattgattaaaagctacatatt 30328409  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||||||    
T  30328408 taatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatt 30328345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 2795520 - 2795683
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  2795520 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatatt 2795619  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| ||||||||||| ||  || | |||||||||||||||||||||||||||||||||||||    
T  2795620 taatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatt 2795683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 4047420 - 4047572
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaa 173  Q
    |||||| | ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4047420 taacatatacaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaa 4047519  T
Q  174 acacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| ||  || |||||||||||||||||||||||||||||||||||||||    
T  4047520 acacaagttccaagttaaagttactactttaaacttcttaacatgtgcaaatt 4047572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 63 - 222
Target Start/End: Original strand, 9184204 - 9184363
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||| ||||| ||||||||| ||||||||| || |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||    
T  9184204 aaggatttgtctaacatgtgtaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaataattattgattaaaaactacatatt 9184303  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgca 222  Q
    ||||||||||||||||| ||  || |||||||||||||||||||||||||||||||||||    
T  9184304 taatataaaaaacacaagttccaagttaaagttactactttaaacttcttaacatgtgca 9184363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 15190871 - 15191033
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||    
T  15190871 gggtttgtctaacatgtgcaatattgcatatgttaaggtaagtaaaagtagtaatttttcattgaaaacaaacaattattgattaaaagttacatattta 15190970  T
Q  165 atat-aaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||||||||| ||  || | ||| |||||||||||||||||||||||||||||||||    
T  15190971 atataaaaaaacacaagtttcaagtcaaaattactactttaaacttcttaacatgtgcaaatt 15191033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 34578010 - 34578171
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| |||||||||||||||| || || |||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  34578010 gggtttgtctaacatgtgcaatattccacatgttaaggtaactaaaagtaataatttttcattgaaaatcaacaattgttgattaaaagctacatattta 34578109  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||| |||| || ||| |||||||||||| ||||||||| ||||||||||||||||    
T  34578110 atataaaaaatacaagttttaagttaaagttactattttaaactttttaacatgtgcaaatt 34578171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 67 - 226
Target Start/End: Complemental strand, 12642170 - 12642011
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaat 166  Q
    |||||| ||||||||||||||||| | || |||||| |||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||||||||    
T  12642170 gtttgtctaacatgtgcaatattgtacatgttaaggcaactaaaagtagtaatttttcattgaaaaccaacaattatcgtttaaatgttacatatttaat 12642071  T
Q  167 ataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||| ||  |||| ||||||| || ||||||||||||||||||||||||||    
T  12642070 ataaaaaacacaagttccaaatcaaagttattaatttaaacttcttaacatgtgcaaatt 12642011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 31366132 - 31365968
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaa--tttttcattgaaaaccaacaattattgattaaaagctacatat 161  Q
    ||||||||| ||||||||||||||||||| || |||||||| ||||| |||||||  ||||| ||||||||||||||||||||||||||| | |||||||    
T  31366132 agggtttgtctaacatgtgcaatattgcacatgttaaggtagctaaatgtagtaactttttttattgaaaaccaacaattattgattaaatgttacatat 31366033  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||| ||  || | |||||||||| ||||||||||||||||||| ||||||    
T  31366032 ttaatataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacatgtacaaatt 31365968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 79 - 219
Target Start/End: Original strand, 11375972 - 11376113
Alignment:
Q  79 tgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacac- 177  Q
    |||||||||||||| || |||| | ||||||||||||||| ||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||     
T  11375972 tgtgcaatattgcacatgttaaagcaactaaaagtagtaacttttcattgaaaatcaataattatttattaaaagctacatatttaatataaaaaacaca 11376071  T
Q  178 aaattataaattaaagttactactttaaacttcttaacatgt 219  Q
    |||||  || | |||||||||||||||||||| ||| |||||    
T  11376072 aaatttcaagtcaaagttactactttaaactttttatcatgt 11376113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 11636728 - 11636891
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagct-acatat 161  Q
    |||||||||| ||||||||||||||||||| || |||| | ||||||||||||||| ||||||||||||||||||||||| | |||||||  | ||||||    
T  11636728 aagggtttgtctaacatgtgcaatattgcacatgttaaagaaactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaatttacatat 11636827  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||   ||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  11636828 ttaatataaatg-cacaagtttcaagtcaaagttactactttaaacttcttatcatgtgcaaatt 11636891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 28629890 - 28630038
Alignment:
Q  78 atgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacac 177  Q
    |||| |||||||||| || |||| | |||||||| || ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  28629890 atgtacaatattgcacatgttaaagcaactaaaaataataacttttcattgaaaaccaacaattatttattaaaagttacatatttaatataaaaaacac 28629989  T
Q  178 aaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    || |   || |||||| || |||||||||||||||| ||||||||||||    
T  28629990 aagtctcaagttaaagatattactttaaacttcttatcatgtgcaaatt 28630038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 8103755 - 8103598
Alignment:
Q  69 ttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaata 167  Q
    |||| ||||||||||||||||||| || |||||| |||||||| |||||| |||| ||||||| |||||||||| | |||||||  ||||||| ||||||    
T  8103755 ttgtctaacatgtgcaatattgcacatgttaaggcaactaaaaatagtaactttttattgaaa-ccaacaattaattattaaaaatctacataattaata 8103657  T
Q  168 taaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||  ||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  8103656 taaaatgcacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatt 8103598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 108 - 226
Target Start/End: Original strand, 41350244 - 41350362
Alignment:
Q  108 aaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaac 207  Q
    ||||||| ||||||| || |||||| ||||||||||| |||||||| ||||||||||||||||||| ||||| ||  || | ||| ||||||||||||||    
T  41350244 aaaagtattaattttgcactgaaaatcaacaattatttattaaaagttacatatttaatataaaaagcacaagttccaagtcaaaattactactttaaac 41350343  T
Q  208 ttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||||    
T  41350344 ttcttaacatgtgcaaatt 41350362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 140 - 219
Target Start/End: Complemental strand, 14466598 - 14466519
Alignment:
Q  140 ttattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgt 219  Q
    |||||||||||||||||||||||||||||||||||||||| ||  || ||||||||||||||||||||||||||||||||    
T  14466598 ttattgattaaaagctacatatttaatataaaaaacacaagtttcaagttaaagttactactttaaacttcttaacatgt 14466519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 171
Target Start/End: Complemental strand, 5958305 - 5958196
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||||||| || || |||| | ||||||||||||||||||||||||||||| ||||||||| | ||| ||||  |||||||    
T  5958305 aagggtttgtctaacatgtgcaatattacacatgttaaagaaactaaaagtagtaatttttcattgaaaatcaacaattaattattaaaaatttacatat 5958206  T
Q  162 ttaatataaa 171  Q
    ||||||||||    
T  5958205 ttaatataaa 5958196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 36597576 - 36597739
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatat 161  Q
    |||||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||| ||||||||||||| || |  ||||| || ||||    
T  36597576 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaaatttttattg-aaaccaacaattatttaacaaaaagttatatat 36597674  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  36597675 ttaatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 36597739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 16174762 - 16174640
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagct-acatatttaatataaaaaacacaaattataaattaaagttactactt 202  Q
    ||||||||||||||| ||||||||||||||||||||||| | ||||||| || ||||||||||||||||   ||||| ||  || | |||||||||||||    
T  16174762 aactaaaagtagtaacttttcattgaaaaccaacaattaattattaaaaacttacatatttaatataaatg-cacaagtttcaattcaaagttactactt 16174664  T
Q  203 taaacttcttaacatgtgcaaatt 226  Q
    |||| ||||||  |||||||||||    
T  16174663 taaatttcttatgatgtgcaaatt 16174640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 30839779 - 30839941
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatatt 162  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||| ||||||||||||| || |  ||||| || |||||    
T  30839779 agggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatatt 30839877  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  30839878 taatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 30839941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 222
Target Start/End: Complemental strand, 24329813 - 24329657
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattga-ttaaaagctacatattta 164  Q
    ||||||| |||||||||||| ||||   || ||||| || |||||||||||||||||| |||||||| ||||| ||||| | ||||||| ||| ||||||    
T  24329813 ggtttgtctaacatgtgcaa-attgtgcatgttaagatatctaaaagtagtaatttttaattgaaaaacaacatttatttatttaaaagatacctattta 24329715  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgca 222  Q
    ||||||||   |||| ||  || | |||||||| ||||||||||| ||||||||||||    
T  24329714 atataaaatgtacaagttccaagtcaaagttaccactttaaactttttaacatgtgca 24329657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 40512951 - 40513111
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattta 164  Q
    ||||||| ||||||||||||||||||| || |||||||||||| ||||||||| |||| |||| ||| ||||||||| || |  ||||| || ||||||     
T  40512951 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactagaagtagtaagtttttattg-aaatcaacaattatttaacaaaaagttatatatttg 40513049  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||| |||| |  ||||||  ||   |||||||||| |||||| || ||||||||||||||||    
T  40513050 atacaaaatattcaaattccaatgcaaagttactattttaaattttttaacatgtgcaaatt 40513111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 132
Target Start/End: Complemental strand, 10665146 - 10665077
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    ||||||||||  |||||||| ||||||||| || |||||||||||||||||| ||| |||||||||||||    
T  10665146 aagggtttgtccaacatgtgtaatattgcacatgttaaggtaactaaaagtaataacttttcattgaaaa 10665077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 107 - 166
Target Start/End: Original strand, 29538768 - 29538827
Alignment:
Q  107 taaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaat 166  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||||||| |||||||||    
T  29538768 taaaagaagtaacttttcattaaaaaccaacaattatttattaaaagctatatatttaat 29538827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 6863587 - 6863716
Alignment:
Q  97 ttaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatatttaatataaaaaacacaaattataaattaaagtt 195  Q
    ||||||||||||||||||| || |||| |||| ||||||||||||| || || ||||| || |||||||||| ||||    ||| ||  ||  |||||||    
T  6863587 ttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaataaaaagttatatatttaatacaaaatgttcaagttccaatataaagtt 6863685  T
Q  196 actactttaaacttcttaacatgtgcaaatt 226  Q
    |||| |||||| || ||||||||||||||||    
T  6863686 actattttaaattttttaacatgtgcaaatt 6863716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 11250138 - 11250058
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||||| ||||||||||||||||||| || |||| | |||||||||||| || |||| | ||| || |||||||||||    
T  11250138 aagggtttgtttaacatgtgcaatattgcacatgttaaagcaactaaaagtagcaagtttt-aatgataaacaacaattatt 11250058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 31567634 - 31567509
Alignment:
Q  102 gtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaaattataaattaaagttactac 200  Q
    ||||||||||  ||||| |||| |||||||| ||| ||||||| |||||||  |||||||||||||||||||   |||||||  ||   ||| |||| |     
T  31567634 gtaactaaaaagagtaactttttattgaaaaacaataattattcattaaaaaactacatatttaatataaaatgaacaaatttcaagacaaaattaccat 31567535  T
Q  201 tttaaacttcttaacatgtgcaaatt 226  Q
    |||||| || ||||||||||||||||    
T  31567534 tttaaattttttaacatgtgcaaatt 31567509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 32020161 - 32020002
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt--aaaagctacatatttaa 165  Q
    ||||| |||||||||||||||||||  | |||||| |||||||  |||||| ||||| ||||||| || | |||||| |||  ||||| ||  |||||||    
T  32020161 tttgtctaacatgtgcaatattgcacttgttaaggaaactaaatctagtaacttttctttgaaaaacaccgattatt-attaaaaaagttatctatttaa 32020063  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| || |||||| ||  ||   ||| |||| | |||||| |||||||||||||||||||    
T  32020062 tatagaatacacaagttccaagacaaacttaccattttaaatttcttaacatgtgcaaatt 32020002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 172
Target Start/End: Original strand, 33072677 - 33072785
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagta--atttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||| ||||||||||||||||||| || ||||   ||||||||||||||   ||||| |||||||  || |||||||| ||| |||||||| ||||||    
T  33072677 gtttgtttaacatgtgcaatattgcacatgttaaatcaactaaaagtagtacttttttttattgaaagacatcaattatttattgaaaagctatatattt 33072776  T
Q  164 aatataaaa 172  Q
    || ||||||    
T  33072777 aacataaaa 33072785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 30893753 - 30893789
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||| ||||||||||||||||||||||||||    
T  30893753 aaagttactattttaaacttcttaacatgtgcaaatt 30893789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 100
Target Start/End: Original strand, 18150374 - 18150412
Alignment:
Q  62 caagggtttgtgtaacatgtgcaatattgcatatattaa 100  Q
    ||||||||||| |||||||||||||||||||||| ||||    
T  18150374 caagggtttgtctaacatgtgcaatattgcatatgttaa 18150412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 18841885 - 18841723
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || ||||   |||||| |||||||| ||||  ||| ||| ||||||||||| ||| ||||| |  ||||||    
T  18841885 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaacttttttttggaaaacaacaattatttattcaaaagttttatattt 18841786  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||   |||||||  ||   ||| || ||| ||||||||| ||||||| ||||||||    
T  18841785 aatattaaatgtacaaatttcaatacaaaatttctattttaaactttttaacatatgcaaatt 18841723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 172
Target Start/End: Original strand, 35469550 - 35469660
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaa-tttttcattgaaaaccaacaat-tattgattaaaagctacatat 161  Q
    ||||||||| ||||||||| | || |||| || |||| |||||||||||||| || ||||| |||||||| |||||||  ||| |  ||||| || ||||    
T  35469550 agggtttgtctaacatgtgaattagtgcacatgttaaagtaactaaaagtagcaatttttttattgaaaaacaacaatcaattaagaaaaagttatatat 35469649  T
Q  162 ttaatataaaa 172  Q
    |||||||||||    
T  35469650 ttaatataaaa 35469660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 132
Target Start/End: Original strand, 315340 - 315408
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaag-gtaactaaaagtagtaatttttcattgaaaa 132  Q
    ||||||||  ||||||| ||||||| ||||||||||  | |||||||| ||||||||||| ||||||||    
T  315340 gggtttgtcaaacatgtacaatattacatatattaaaagcaactaaaaatagtaatttttgattgaaaa 315408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 178
Target Start/End: Complemental strand, 10658469 - 10658356
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| |||||||||| ||||| || ||  ||| | |||||||||||| || ||| |||||||||  |  |||| || |||||||  || |||||    
T  10658469 aagggtttgtttaacatgtgcgatattacacatgataaaggaactaaaagtagcaactttacattgaaaa--ataaattctttattaaaaattatatatt 10658372  T
Q  163 taatataaaaaacaca 178  Q
    |||||||||| |||||    
T  10658371 taatataaaatacaca 10658356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 52959 - 52797
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattt 163  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  52959 agggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatattt 52860  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||||||||| ||  || | |||||||||||||||||||||||||||||||||||||    
T  52859 aatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatt 52797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 145675 - 145837
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattt 163  Q
    ||||||||| ||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  145675 agggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattattgattaaaagttacatattt 145774  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||||||||| ||  || | |||||||||||||||||||||||||||||||||||||    
T  145775 aatacaaaaaacacaagttccaagtcaaagttactactttaaacttcttaacatgtgcaaatt 145837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 116; Significance: 4e-59; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 3863326 - 3863489
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || |||||||||||||| ||||||| ||||||||||||| || ||||||||||||||||||||||||||    
T  3863326 aagggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaggtagtaacttttcattgaaaatcagcaattattgattaaaagctacatatt 3863425  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  ||  ||||||||||||||||||||||||||||||||||||||    
T  3863426 taatataaaaaacacaagttccaagctaaagttactactttaaacttcttaacatgtgcaaatt 3863489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 11610911 - 11611074
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||||||||||||||||| || |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||    
T  11610911 aagggtttgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaacttttcattgaaaaccaacaattatttattaaaagttacatatt 11611010  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  11611011 taatataaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatt 11611074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 92 - 226
Target Start/End: Complemental strand, 16875177 - 16875043
Alignment:
Q  92 atatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaa 191  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||  || ||||    
T  16875177 atatgttaaggtaactaaaagtagtaattttttattgaaaaccaacaattgttgattaaaagctacatatttaatataaaaaacacaagtttcaagttaa 16875078  T
Q  192 agttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||||||||||||||||||||    
T  16875077 agttactactttaaacttcttaacatgtgcaaatt 16875043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 66 - 224
Target Start/End: Original strand, 50364190 - 50364348
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaa 165  Q
    ||||||| ||||||||||| ||||||| || | |||||||||||||||||||| || | ||||||||||||||||||||||||||||| |||||||||||    
T  50364190 ggtttgtctaacatgtgcagtattgcacatgtaaaggtaactaaaagtagtaacttataattgaaaaccaacaattattgattaaaagttacatatttaa 50364289  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaa 224  Q
    |||||||||||||| ||  || | |||||||||||||||||||||||| ||||||||||    
T  50364290 tataaaaaacacaagttccaagtcaaagttactactttaaacttcttagcatgtgcaaa 50364348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 54621399 - 54621239
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||| ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| | ||||||||    
T  54621399 aaggatttgtctaacatgtgcaatattgcatatgttaaggtaattaaaagtagtaatttttcattaaaaaccaacaattattgattaaatgttacatatt 54621300  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaa 224  Q
    ||||||||||||||||| ||  || | |||||||||| |||||| || |||| |||||||||    
T  54621299 taatataaaaaacacaacttccaagtcaaagttactaatttaaa-tttttaaaatgtgcaaa 54621239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 20938057 - 20938217
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaat 166  Q
    |||||| ||||||||||||||||||| || |||||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  20938057 gtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtaataactttttattgaaaactaacaattattgattaaaaattacatatttaat 20938156  T
Q  167 at-aaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    || ||||||||||| ||  || | |||||||||||||||||||||||| ||||||||||||    
T  20938157 ataaaaaaacacaagttccaagtcaaagttactactttaaacttcttatcatgtgcaaatt 20938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 68 - 180
Target Start/End: Complemental strand, 51339360 - 51339248
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaata 167  Q
    ||||| ||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  51339360 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttcattgaaaaccaacaattattgattaaaagctacgtatttaata 51339261  T
Q  168 taaaaaacacaaa 180  Q
    |||||||||||||    
T  51339260 taaaaaacacaaa 51339248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 13495290 - 13495454
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| ||||||||||||  ||||| || ||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||| ||||||||    
T  13495290 aagggtttgtctaacatgtgcaaatttgcacatgttaaggtaactaaaagtagtaattttttattgaaaatcaacaattatttattaaaaacctacatat 13495389  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||  ||||| ||  || | ||| |||||||||||||||||||| ||||||||||||    
T  13495390 ttaatataaaatgcacaagttccaagtcaaaattactactttaaacttcttatcatgtgcaaatt 13495454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 32553374 - 32553526
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaa 173  Q
    |||||||||||||||| || || ||||||||| |||||||||||| ||||||||||||| ||| |||||||  |||||   |||||||||||||||||||    
T  32553374 taacatgtgcaatattacacatgttaaggtaattaaaagtagtaacttttcattgaaaatcaataattattagttaaatattacatatttaatataaaaa 32553473  T
Q  174 acacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| ||  |||||||||||| || |||||||||||||||||||| |||||    
T  32553474 acacaagtttcaaattaaagttattaatttaaacttcttaacatgtgtaaatt 32553526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 38389445 - 38389607
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || ||||| || |||||||||||||||||| |||||||| ||| | ||||| ||| |||||||||||||||    
T  38389445 gggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatattt 38389544  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||  ||||| ||  || | ||| |||| ||||||||||||||||||||||||||||    
T  38389545 aatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatt 38389607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 29686367 - 29686480
Alignment:
Q  113 tagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    |||||| |||||| |||| | ||||||||||| ||||||||||| |||| ||||||||||||||||| || ||| |||||||||||||||||||||||||    
T  29686367 tagtaacttttcactgaatatcaacaattatttattaaaagctatatatgtaatataaaaaacacaagttctaagttaaagttactactttaaacttctt 29686466  T
Q  213 aacatgtgcaaatt 226  Q
    | ||||||||||||    
T  29686467 atcatgtgcaaatt 29686480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 97 - 226
Target Start/End: Original strand, 40497078 - 40497207
Alignment:
Q  97 ttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaaattataaattaaagtt 195  Q
    |||||| ||||||||||||||| |||| ||||||| | |||||||| | |||||||  ||||||| |||||||||||  ||||| || ||| ||||||||    
T  40497078 ttaaggcaactaaaagtagtaactttttattgaaatc-aacaattaattattaaaaatctacatagttaatataaaatgcacaagttctaagttaaagtt 40497176  T
Q  196 actactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||| ||||||||||||    
T  40497177 actactttaaacttcttatcatgtgcaaatt 40497207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 104 - 225
Target Start/End: Complemental strand, 38786463 - 38786343
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactacttt 203  Q
    |||||||| ||||||||||| ||||||||  |||||||||| |||||||  |||| ||||| |||||||  ||||||||  |||| ||| |||||| |||    
T  38786463 aactaaaaatagtaattttttattgaaaat-aacaattatttattaaaaaatacacatttagtataaaatccacaaatttcaaatcaaaattactatttt 38786365  T
Q  204 aaacttcttaacatgtgcaaat 225  Q
    ||||||||||||||||||||||    
T  38786364 aaacttcttaacatgtgcaaat 38786343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 37055548 - 37055384
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||| ||||||||||||| |||| | |||||||| |||||| ||| |||||||||  |||||||||| ||| ||||| |  |||     
T  37055548 aagggtttgtctaacatgtacaatattgcatatgttaaaggaactaaaaatagtaactttacattgaaaaagaacaattatttattaaaaagttttatag 37055449  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||| ||   |   ||  |||||| |||||||||||||| |||||||||||    
T  37055448 ttaatataaaaaacacaagttccgatacaactttactattttaaacttcttaatatgtgcaaatt 37055384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 2571267 - 2571428
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattt 163  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||| ||||||||||||| || |  ||||| || ||||||    
T  2571267 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatattt 2571365  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  2571366 aatacaaaatgttcaagttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 2571428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 157
Target Start/End: Complemental strand, 30214191 - 30214098
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctac 157  Q
    |||||||||| |||||||||||||||| || ||  ||||| |||||||| |||||| ||||||||||||| ||||||||||| ||||||||||||    
T  30214191 aagggtttgtctaacatgtgcaatattacacattctaaggcaactaaaa-tagtaacttttcattgaaaatcaacaattatttattaaaagctac 30214098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 12515653 - 12515575
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| ||| ||||||||||||||||    
T  12515653 gggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttatt-aaaaccaacaattatt 12515575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 113 - 224
Target Start/End: Original strand, 24978693 - 24978804
Alignment:
Q  113 tagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttctt 212  Q
    |||||| |||| ||||| |||||| |||||||||||||||  |||||||| ||| |||||||||||| ||  || | || || |||||||||||||| ||    
T  24978693 tagtaactttttattgagaaccaataattattgattaaaaattacatattaaatttaaaaaacacaagtttcaagtcaacgtaactactttaaacttgtt 24978792  T
Q  213 aacatgtgcaaa 224  Q
    ||||||||||||    
T  24978793 aacatgtgcaaa 24978804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 46845620 - 46845533
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||| ||| ||||||||||||||| || |||| | |||||||||||| ||||||| |||||||| ||||||||||| |||||||    
T  46845620 gggtttgtctaatatgtgcaatattgcacatcttaaagcaactaaaagtagaaattttttattgaaaatcaacaattatttattaaaa 46845533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 10307765 - 10307843
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||| ||||||||||||||||||| ||  |||||||||||||||||| || |||| |||| |||||||||||||||    
T  10307765 gggtttgtctaacatgtgcaatattgcacatgataaggtaactaaaagtagcaaatttttattg-aaaccaacaattatt 10307843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 36426592 - 36426427
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttc--attgaaaaccaacaattattgattaaaa-gctacata 160  Q
    ||||||| | || ||||||||| |||||| || ||||  || ||||||||||||||||||   || ||||| ||| | ||||| ||||||| ||||||||    
T  36426592 agggtttttctatcatgtgcaacattgcacatgttaaaatatctaaaagtagtaattttttttatcgaaaaacaaaacttatttattaaaaagctacata 36426493  T
Q  161 tttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||| |||  ||||| ||  || | ||| |||| |||||||||||||||||||||| |||||    
T  36426492 tttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgtaaatt 36426427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 226
Target Start/End: Complemental strand, 46492519 - 46492361
Alignment:
Q  69 ttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaa-aagctacatatttaata 167  Q
    |||| ||| ||||||||||||||| || |||| | |||||||||| |||| |||| |||||||| ||||||||||| |||||  || || ||||||||||    
T  46492519 ttgtttaaaatgtgcaatattgcacatgttaaagcaactaaaagtggtaagtttttattgaaaaacaacaattatttattaacgagttatatatttaata 46492420  T
Q  168 taaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
     ||||   |||| ||  ||   ||||||||||||||||| |||||||| |||| |||||    
T  46492419 caaaatgtacaagtttcaatgcaaagttactactttaaatttcttaacgtgtgaaaatt 46492361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 51618048 - 51618207
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatattta 164  Q
    |||||||| ||||||||||||||||||| || ||||   ||||||||| || || |||| | |||||| ||||||||||| |||||||  || |||||||    
T  51618048 gggtttgtctaacatgtgcaatattgcacatgttaaaacaactaaaagcagcaagtttttactgaaaaacaacaattatttattaaaa--tatatattta 51618145  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||| ||||   |||| ||  ||   |||||||| | || |||||||||||||||||||||||    
T  51618146 atacaaaatgtacaagttccaatgcaaagttacaatttgaaacttcttaacatgtgcaaatt 51618207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 37444143 - 37444231
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    ||||| |||| ||||||||||||||||||| || |||||| ||||||||||||||| |||| |||| ||| ||||||||| | |||||||    
T  37444143 aagggattgtctaacatgtgcaatattgcacatgttaaggcaactaaaagtagtaactttttattg-aaatcaacaattaattattaaaa 37444231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 47386919 - 47387008
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattg-aaaaccaacaattattgattaaaa 152  Q
    ||||||||| ||||||||||||||||||  ||||||| | ||||||||||||||| |||| |||| ||||  |||||||||| |||||||    
T  47386919 agggtttgtctaacatgtgcaatattgcgcatattaaagcaactaaaagtagtaagtttttattgaaaaaaaaacaattatttattaaaa 47387008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 23638229 - 23638067
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattt 163  Q
    |||||||| |||||||||||||||||   || ||||| ||||| |||||||||| |||  |||||||| || |||||| || || ||||| |  ||||||    
T  23638229 gggtttgtctaacatgtgcaatattgtgcatgttaagttaacttaaagtagtaactttctattgaaaaacatcaattatttaataaaaagttgtatattt 23638130  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||| |||||| ||  ||    || |||| | |||||| |||||||||||||||||||    
T  23638129 aatataaaatacacaagtttcaagactaacttaccattttaaatttcttaacatgtgcaaatt 23638067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 226
Target Start/End: Original strand, 36812377 - 36812418
Alignment:
Q  185 aaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  36812377 aaatcaaagttactactttaaacttcttaacatgtgcaaatt 36812418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 226
Target Start/End: Original strand, 23523030 - 23523106
Alignment:
Q  150 aaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||| |||  ||||| ||  || | ||| |||| ||||||||||||||||||||||||||||    
T  23523030 aaagctacatatttaatatgaaatgcacaagttccaagtcaaaattaccactttaaacttcttaacatgtgcaaatt 23523106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 67 - 219
Target Start/End: Complemental strand, 1569368 - 1569215
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatta-aaagctacatatttaa 165  Q
    |||||| |||||| |||||||||||| || |||| | |||   || ||||||||||| ||| |||| ||||||| ||| |||| |||| ||||||| |||    
T  1569368 gtttgtctaacatatgcaatattgcacattttaaagcaacccgaactagtaattttttattaaaaaacaacaataatttattagaaagttacatatctaa 1569269  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgt 219  Q
    |||||||   |||| ||  ||   ||||||| || |||||||||||||||||||    
T  1569268 tataaaatgaacaagttccaatacaaagttattattttaaacttcttaacatgt 1569215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 83 - 132
Target Start/End: Original strand, 35094972 - 35095021
Alignment:
Q  83 caatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||||||| || |||||||||||||||| ||||| |||||||||||||    
T  35094972 caatattgcacatgttaaggtaactaaaagcagtaacttttcattgaaaa 35095021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 11611100 - 11611136
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||||||||| ||||||||||||    
T  11611100 aaagttactactttaaacttcttatcatgtgcaaatt 11611136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Original strand, 49396472 - 49396540
Alignment:
Q  158 atatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||  || ||||| ||| | ||| ||||||||||||||||||||| |||| ||||||    
T  49396472 atatttaatataaaatgcataaattttaattcaaatttactactttaaacttcttaatatgtacaaatt 49396540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 132
Target Start/End: Original strand, 43750052 - 43750117
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||| ||||||| ||||||||||| || |||||  | |||||||||||||| ||||| ||||||    
T  43750052 gtttgtctaacatgggcaatattgcacatgttaagacatctaaaagtagtaatgtttcactgaaaa 43750117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 49396367 - 49396436
Alignment:
Q  83 caatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    ||||||||||||| |||| | |||||||| ||  ||||||| |||||||| | ||||||||| |||||||    
T  49396367 caatattgcatatgttaaaggaactaaaaataacaatttttgattgaaaaactacaattatttattaaaa 49396436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 9710981 - 9711029
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    |||||||| |||||| |||| |||||||| ||||||||||| |||||||    
T  9710981 aactaaaactagtaagtttttattgaaaaacaacaattattaattaaaa 9711029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 182
Target Start/End: Original strand, 37332122 - 37332229
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaa 173  Q
    ||||||||||||||||||| || |||| | |||||||| ||  ||||||| ||| |||| ||  || |||| || ||||  || |||||||||||||||     
T  37332122 taacatgtgcaatattgcacatgttaatgcaactaaaattacaaattttttattaaaaaacattaa-tatttatgaaaaattatatatttaatataaaat 37332220  T
Q  174 acacaaatt 182  Q
    |||||||||    
T  37332221 acacaaatt 37332229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 39365310 - 39365258
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaa 118  Q
    ||||||| ||||||||||||||||||| || |||| |  ||||||||||||||    
T  39365310 ggtttgtctaacatgtgcaatattgcacatgttaaagctactaaaagtagtaa 39365258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 112; Significance: 9e-57; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 5692 - 5851
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttc-attgaaaaccaacaattattgattaaaagctacatatttaat 166  Q
    ||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  5692 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaat 5791  T
Q  167 ataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||| ||||||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  5792 ataaaaaatacaaattttaagttaaagttactactttaaactttttaacatgtgcaaatt 5851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 9e-57; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 68 - 226
Target Start/End: Original strand, 23553571 - 23553730
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttc-attgaaaaccaacaattattgattaaaagctacatatttaat 166  Q
    ||||| ||||||||||||||||||| || ||||||||||||||| |||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  23553571 tttgtctaacatgtgcaatattgcacatgttaaggtaactaaaaatagtaatttttttattgaaaaccaacaattattgattaaaaactacatatttaat 23553670  T
Q  167 ataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||| ||||||| ||| |||||||||||||||||||||| ||||||||||||||||    
T  23553671 ataaaaaatacaaattttaagttaaagttactactttaaactttttaacatgtgcaaatt 23553730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 29190982 - 29190834
Alignment:
Q  78 atgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacac 177  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||||||||||| ||||||||    
T  29190982 atgtgcaatattgcatatgttaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaatgttgcatatttaatattaaaaacac 29190883  T
Q  178 aaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    || ||  || | |||||||||| ||||||||||||||||||||||||||    
T  29190882 aagttccaagtcaaagttactaatttaaacttcttaacatgtgcaaatt 29190834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 7349685 - 7349848
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| ||||| ||||||||||||| || |||||| ||||||||||| ||| |||||||||||||||||||||||||  ||||||| ||||||||    
T  7349685 aagggtttgtctaacacgtgcaatattgcacatgttaaggcaactaaaagtaataacttttcattgaaaaccaacaattatttgttaaaagttacatatt 7349784  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||| || ||| | |||||||||||||||||||||||| ||||| ||||||    
T  7349785 taatataaaaaacacaagttttaagtcaaagttactactttaaacttcttatcatgtacaaatt 7349848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 74 - 226
Target Start/End: Complemental strand, 36000110 - 35999965
Alignment:
Q  74 taacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaa 173  Q
    |||||| |||||||||| | || |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36000110 taacatatgcaatattgtacatgttaaggtaactaaaagtagtaactttttattgaaaaccaacaattattgattaaaagctacatatttaatataaaaa 36000011  T
Q  174 acacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||       || |||||||||||||||||||||||||||||||||||||||    
T  36000010 acac-------aagttaaagttactactttaaacttcttaacatgtgcaaatt 35999965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 99 - 226
Target Start/End: Complemental strand, 48910947 - 48910820
Alignment:
Q  99 aaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttact 198  Q
    ||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||| ||||||||||||||||   | |||||||||||    
T  48910947 aaggtaactaaaagtagtaattttttattgaaaattaacaattattgattaaaagctacatatttaacataaaaaacacaaattcctagttaaagttact 48910848  T
Q  199 actttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||||||||||| ||||||||    
T  48910847 actttaaacttcttaacatatgcaaatt 48910820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 92 - 226
Target Start/End: Original strand, 53961348 - 53961482
Alignment:
Q  92 atatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaa 191  Q
    |||| |||| ||||||||||||||||||||||||||||||| |||||||||||| ||||| | ||||||||||||||||||||||||||||  || | ||    
T  53961348 atatgttaaagtaactaaaagtagtaatttttcattgaaaatcaacaattattgtttaaatgttacatatttaatataaaaaacacaaatttcaagtcaa 53961447  T
Q  192 agttactactttaaacttcttaacatgtgcaaatt 226  Q
    | |||||| ||||||||||||||||||||||||||    
T  53961448 aattactaatttaaacttcttaacatgtgcaaatt 53961482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 10389446 - 10389286
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaa 165  Q
    ||||||| |||||||||||||||| || || |||  ||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||||||||| |    
T  10389446 ggtttgtctaacatgtgcaatattacacatgttatagtaactaaaagtattaacttttaattgaaaaccaacaattattgattaaaagttacatatttca 10389347  T
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||| || ||| | ||| ||||||||| ||| || ||||||||||||||||    
T  10389346 tataaaaaacacaagttctaagtcaaaattactacttgaaattttttaacatgtgcaaatt 10389286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 98 - 226
Target Start/End: Complemental strand, 41415703 - 41415575
Alignment:
Q  98 taaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttac 197  Q
    ||||| ||||||||||||||| |||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||  || | ||||||||    
T  41415703 taaggcaactaaaagtagtaacttttaattgaaaatcaacaattatttattaaaagctacatatttaatataaaaaacacaaatttcaagtcaaagttac 41415604  T
Q  198 tactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||| ||| ||||||||||||    
T  41415603 tactttaaacttattatcatgtgcaaatt 41415575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 4329630 - 4329754
Alignment:
Q  102 gtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactact 201  Q
    |||| ||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||||  || | ||||||||||||    
T  4329630 gtaattaaaagtagtaatttttaattgaaaaccaacgattattgattaaaagttacatatttaatataaaaaacataaatttcaagtcaaagttactact 4329729  T
Q  202 ttaaacttcttaacatgtgcaaatt 226  Q
    |||||||| ||||||| ||||||||    
T  4329730 ttaaactttttaacatatgcaaatt 4329754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 167
Target Start/End: Original strand, 49228353 - 49228457
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatt 162  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| ||||||||| | ||||||||    
T  49228353 aagggtttgtctaacatgtgcaatattgcatatgttaaggtaactaaaagtagtaacttttcattgaaaaccaacaattgttgattaaatgttacatatt 49228452  T
Q  163 taata 167  Q
    |||||    
T  49228453 taata 49228457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 16667565 - 16667402
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatt 162  Q
    ||||||||| |||||||||||| |||||| || |||||  | ||||||||||||||||||||||||||| ||||| ||||| ||| ||||||||||||||    
T  16667565 agggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatt 16667466  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||| |||||| ||  || ||||| |||  | ||||||||||||||||||||||||||    
T  16667465 taatataaaatacacaagtttcaagttaaaattatcattttaaacttcttaacatgtgcaaatt 16667402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 225
Target Start/End: Complemental strand, 10813658 - 10813513
Alignment:
Q  81 tgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacata-tttaatataaaaaacacaa 179  Q
    ||||||||||||||| |||||| ||||||||||| ||| |||| ||||||||||||||||||||  ||||||| |||||| |||||| ||||||||||||    
T  10813658 tgcaatattgcatatgttaaggcaactaaaagtaataactttttattgaaaaccaacaattatttgttaaaagttacatattttaatttaaaaaacacaa 10813559  T
Q  180 attataaattaaagttactactttaaacttcttaacatgtgcaaat 225  Q
    ||| ||| | |||||||||||||||||||| ||| ||| |||||||    
T  10813558 attttaagtcaaagttactactttaaacttattatcatatgcaaat 10813513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 54495818 - 54495655
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatt 162  Q
    ||||||||| |||||||||||| |||||| || ||||| || ||||||||||||||||||  ||||||| ||| | ||||| ||||||| ||||||||||    
T  54495818 agggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaatttttttttgaaaaacaaaacttatttattaaaaagctacatatt 54495719  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| |||  ||||| ||  || |||||||||| ||||||||||||||||||||||||||||    
T  54495718 taatatgaaatgcacaagttccaagttaaagttaccactttaaacttcttaacatgtgcaaatt 54495655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 49650210 - 49650319
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaa 165  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||| ||||| |||||||| ||||| |||||||||||| |||| | ||||| |||||    
T  49650210 ggtttgtctaacctgtgcaatattgcacatattaaggtaactaaaagaagtaacttttcattaaaaacaaacaattattgaataaatgttacatgtttaa 49650309  T
Q  166 tataaaaaac 175  Q
    ||||||||||    
T  49650310 tataaaaaac 49650319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 27362387 - 27362551
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatat 161  Q
    |||||||| | ||||||  |||| ||||||||| ||||| || |||||||||||||||||| |||||||| ||| | ||||| || |||| |||||||||    
T  27362387 aagggtttatctaacatacgcaacattgcatatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttatcaaaaagctacatat 27362486  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||  ||||||||  || | ||| |||| ||||||||||||||||||||||||||||    
T  27362487 ttaatatgaaatgcacaaattccaagtcaaaattaccactttaaacttcttaacatgtgcaaatt 27362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 47327074 - 47326910
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||| ||||||| |||||| || |||||  | ||||||||||||||||||||||||||| ||| | ||||| ||| |||| ||||||||    
T  47327074 aagggtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatat 47326975  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||  || || ||  || | |||||||| ||||||||||||||||||||||||||||    
T  47326974 ttaatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatt 47326910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 47341870 - 47341706
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||| ||||||| |||||| || |||||  | ||||||||||||||||||||||||||| ||| | ||||| ||| |||| ||||||||    
T  47341870 aagggtttgtctaacctgtgcaacattgcacatgttaagacatctaaaagtagtaatttttcattgaaaaacaaaacttatttattaaaaaactacatat 47341771  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||  || || ||  || | |||||||| ||||||||||||||||||||||||||||    
T  47341770 ttaatatgaaatgcaaaagttccaagtcaaagttaccactttaaacttcttaacatgtgcaaatt 47341706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 8736992 - 8736829
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| |||||||||||| |||||| || |||||  | |||||||||||||||||| |||||||| ||| | ||||| ||| ||||| |||||||    
T  8736992 aagggtttgtctaacatgtgcaacattgcacatgttaagacatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagttacatat 8736893  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||  ||| | ||  || | |||||||| |||||||| |||||||||||||||||||    
T  8736892 ttaatatgaaatgcac-agttccaagtcaaagttaccactttaaatttcttaacatgtgcaaatt 8736829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 49181069 - 49181232
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatt 162  Q
    |||| |||| ||| ||||||||||||||| || |||||| |||||||||||| ||  ||| |||||||| ||||||| ||| ||| ||||| ||||||||    
T  49181069 agggcttgtctaaaatgtgcaatattgcacatgttaaggaaactaaaagtagcaacctttaattgaaaaacaacaatcatttattgaaaagttacatatt 49181168  T
Q  163 taatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||||  ||||| ||| ||   ||| |||||| ||| |||||||||||| |||||||||    
T  49181169 taatataaaatgcacaagttacaatacaaatttactattttgaacttcttaacaggtgcaaatt 49181232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 226
Target Start/End: Complemental strand, 23051490 - 23051400
Alignment:
Q  136 acaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||||| |||||||| ||||||||| ||||||||||||||| ||  || | ||||||||||||||||| |||||| ||||||||||||    
T  23051490 acaattatttattaaaagttacatattttatataaaaaacacaagtttcaagtcaaagttactactttaaatttcttatcatgtgcaaatt 23051400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 34941276 - 34941438
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||||  || |||| |||||||| |||||| |||| ||| ||||| || |||||     
T  34941276 gggtttgtctaacatgtgtaatattgcacatattaaggtaactaaaagtaacaactttttattgaaaaacaacaactatttattaaaaagttatatatta 34941375  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||| ||||   |||| ||  ||   ||| |||||| ||||||||||||| ||||||||||||    
T  34941376 aatacaaaatgtacaagttccaatgcaaaattactattttaaacttcttatcatgtgcaaatt 34941438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 226
Target Start/End: Complemental strand, 9759320 - 9759160
Alignment:
Q  66 ggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaatta-ttgattaaaagctacatattta 164  Q
    ||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||| ||||||||||||| || |  ||||| || |||||||    
T  9759320 ggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatttaacaaaaagttatatattta 9759222  T
Q  165 atataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||| ||||    ||| ||  ||   |||||||||| |||||| |||||||||||||||||||    
T  9759221 atacaaaatgttcaacttccaatgcaaagttactattttaaatttcttaacatgtgcaaatt 9759160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 50352300 - 50352379
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    ||||||||| ||||||||||||||||||| || ||||||||||||||||||| || |||| |||| |||||||||||||||    
T  50352300 agggtttgtctaacatgtgcaatattgcacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatt 50352379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 10658623 - 10658545
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||| |||||||||||||||| || || ||||||||||||||||||| || |||| |||| |||||||||||||||    
T  10658623 gggtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatt 10658545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 144
Target Start/End: Complemental strand, 10872768 - 10872690
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||| |||||||||||||||| || || ||||||||||||||||||| || |||| |||| |||||||||||||||    
T  10872768 gggtttgtctaacatgtgcaatattacacatgttaaggtaactaaaagtagcaagtttttattg-aaaccaacaattatt 10872690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 104 - 226
Target Start/End: Complemental strand, 37785001 - 37784878
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaa-gctacatatttaatataaaaaacacaaattataaattaaagttactactt 202  Q
    |||||||||||| || |||| |||||||| ||| ||| ||| ||||||| | ||||||||||| ||||||  ||||||||| ||  |||| |||||| ||    
T  37785001 aactaaaagtagcaactttttattgaaaaacaataatcatttattaaaaagttacatatttaacataaaatgcacaaattacaatataaatttactattt 37784902  T
Q  203 taaacttcttaacatgtgcaaatt 226  Q
    | ||||||||||||||| ||||||    
T  37784901 tgaacttcttaacatgtccaaatt 37784878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 65 - 144
Target Start/End: Original strand, 40049557 - 40049635
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    |||||||| ||||||||||||||||||| || |||| ||||||||||||||||| |||| || | |||||||||||||||    
T  40049557 gggtttgtctaacatgtgcaatattgcacatgttaaagtaactaaaagtagtaagtttttatag-aaaccaacaattatt 40049635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 2096869 - 2097031
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| ||||||||||||||||||| |  ||||   ||||||||||   || |||| |||||||| ||||||||||| ||| ||||| || ||||||    
T  2096869 gggtttgtctaacatgtgcaatattgcacaagttaaatcaactaaaagtgacaactttttattgaaaaacaacaattatttattaaaaagttatatattt 2096968  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||  ||||| ||  ||   ||| |||| | ||| ||||||||||||||||||||||    
T  2096969 aatataaaatgcacaagttccaatacaaacttaccattttgaacttcttaacatgtgcaaatt 2097031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 77 - 226
Target Start/End: Original strand, 23438164 - 23438315
Alignment:
Q  77 catgtgcaatattgcatatattaag--gtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaa 173  Q
    |||||||||||||||||||||||    | ||||||| ||||||| |||| |||||||| ||||||| ||| |||||||| | ||||||||| |||||||     
T  23438164 catgtgcaatattgcatatattatatagcaactaaatgtagtaactttttattgaaaaacaacaataatttattaaaaggcaacatattta-tataaaat 23438262  T
Q  174 acacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
      |||| ||  |||  |||||||||| |||||| |||| ||||||||||||||    
T  23438263 gaacaagtttcaaaacaaagttactattttaaaattctcaacatgtgcaaatt 23438315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 39876844 - 39876907
Alignment:
Q  80 gtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattatt 144  Q
    ||||||||||||| || |||||||||||||||||||||| |||| |||| |||||||||||||||    
T  39876844 gtgcaatattgcacatgttaaggtaactaaaagtagtaagtttttattg-aaaccaacaattatt 39876907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 132
Target Start/End: Original strand, 49332330 - 49332398
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    ||||||||| |||||||||||||||| || || ||||||||| |||||||| ||| |||||||||||||    
T  49332330 agggtttgtctaacatgtgcaatatttcacatgttaaggtaattaaaagtaataacttttcattgaaaa 49332398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 168
Target Start/End: Original strand, 39539465 - 39539566
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaat 166  Q
    ||||| ||||||| |||| |||||| ||  ||||  | |||||  |||||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||    
T  39539465 tttgtctaacatgcgcaacattgcacatgctaagacatctaaacttagtaatttttcattgaaaaacaacacttatttattaaaaagctacatatttaat 39539564  T
Q  167 at 168  Q
    ||    
T  39539565 at 39539566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 168
Target Start/End: Original strand, 23545474 - 23545578
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || ||||   |||||| |||||||||||||  ||||||| ||||||||||| ||| ||||| |  ||||||    
T  23545474 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaattttttcttgaaaaacaacaattatttattcaaaagttttatattt 23545573  T
Q  164 aatat 168  Q
    |||||    
T  23545574 aatat 23545578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 52391294 - 52391458
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatat 161  Q
    |||||||||| ||| ||||| ||| ||||| || ||||  ||||||| |||||||| ||||  ||||||| ||||||||||| ||| ||||| |  ||||    
T  52391294 aagggtttgtctaatatgtgtaatgttgcacatgttaaaataactaatagtagtaacttttttttgaaaaacaacaattatttattcaaaagttttatat 52391393  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| |||   |||| ||  ||   ||| || ||| ||||||||||||||||||||||||||    
T  52391394 ttaatattaaatgtacaagttccaatacaaaatttctattttaaacttcttaacatgtgcaaatt 52391458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 9327049 - 9326982
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||||| |||||| ||||||||||||||| |||| | ||||||  ||||||| |||||||||||||    
T  9327049 gggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9326982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 9373771 - 9373704
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||||| |||||| ||||||||||||||| |||| | ||||||  ||||||| |||||||||||||    
T  9373771 gggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9373704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 65 - 132
Target Start/End: Complemental strand, 9382083 - 9382016
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||||| |||||| ||||||||||||||| |||| | ||||||  ||||||| |||||||||||||    
T  9382083 gggtttgtctaacatatgcaatattgcatatgttaaagaaactaattgtagtaacttttcattgaaaa 9382016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 17409822 - 17409984
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || ||||   |||||| |||||||| ||||  ||||||| ||||||||||| ||| ||||  |  ||||||    
T  17409822 gggtttgtctaacatgtgcaacattgcacatgttaaaacaactaatagtagtaactttttcttgaaaaacaacaattatttattcaaaaaatttatattt 17409921  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||   |||| ||  ||   |||||| ||| ||||||||||||| ||||||||||||    
T  17409922 aatattaaatgtacaagttccaatacaaagtttctattttaaacttcttatcatgtgcaaatt 17409984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 40681960 - 40682014
Alignment:
Q  78 atgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaa 132  Q
    |||||||||||||||||| |||||  |||||||| ||||||||||| ||||||||    
T  40681960 atgtgcaatattgcatatgttaagtcaactaaaaatagtaattttttattgaaaa 40682014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 114
Target Start/End: Complemental strand, 48911014 - 48910965
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagta 114  Q
    |||||||| ||||||||||||||||||| || ||||| ||||||||||||    
T  48911014 gggtttgtctaacatgtgcaatattgcacatgttaagataactaaaagta 48910965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 49228754 - 49228814
Alignment:
Q  166 tataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||| ||  || | |||||||||| |||||||||||||||| |||||||||    
T  49228754 tataaaaaacacaagttccaagtcaaagttactaatttaaacttcttaacacgtgcaaatt 49228814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 103
Target Start/End: Original strand, 39876807 - 39876845
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggt 103  Q
    |||||||| |||||||||||||||||||||| |||||||    
T  39876807 gggtttgtctaacatgtgcaatattgcatatgttaaggt 39876845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 179
Target Start/End: Original strand, 6875501 - 6875614
Alignment:
Q  67 gtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaa 165  Q
    |||||| |||||| |||||||||||| || ||||   |||||||| ||||||| ||| |||| |||  | |||||||| ||| ||||| || | ||||||    
T  6875501 gtttgtctaacatttgcaatattgcacatgttaaaacaactaaaaatagtaatattttattggaaaatatcaattatttattgaaaagttataaatttaa 6875600  T
Q  166 tataaaaaacacaa 179  Q
    ||||||| ||||||    
T  6875601 tataaaatacacaa 6875614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 152
Target Start/End: Complemental strand, 16069341 - 16069300
Alignment:
Q  111 agtagtaatttttcattgaaaaccaacaattattgattaaaa 152  Q
    ||||||||||||| |||||||| ||||||||||| |||||||    
T  16069341 agtagtaattttttattgaaaaacaacaattatttattaaaa 16069300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 117
Target Start/End: Original strand, 36968285 - 36968338
Alignment:
Q  64 agggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagta 117  Q
    ||||||| | |||||||||||||||| || || |||| ||||||||||||||||    
T  36968285 agggtttatctaacatgtgcaatattacacatgttaaagtaactaaaagtagta 36968338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 227
Target Start/End: Original strand, 40682556 - 40682593
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaattg 227  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  40682556 aaagttactattttaaatttcttaacatgtgcaaattg 40682593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 39876954 - 39876990
Alignment:
Q  190 aaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||| |||||| |||||||||||||||||||    
T  39876954 aaagttactattttaaatttcttaacatgtgcaaatt 39876990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 74 - 226
Target Start/End: Complemental strand, 3587 - 3431
Alignment:
Q  74 taacatgtgcaatatt---gcatatattaaggtaactaaaagtagtaa-tttttcattgaaaaccaacaattattgattaaaagctacatatttaatata 169  Q
    ||||||||||||||||   ||| || |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  3587 taacatgtgcaatattattgcacatgttaatgtaactaaaagtagtaactttttcattaaaaaccaacaattattgattaaaagttacatatttaatata 3488  T
Q  170 aaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||||| || ||  || ||||||| ||||||||||||||||||| |||||||||||    
T  3487 aaaaacataagttccaatttaaagtaactactttaaacttcttaatatgtgcaaatt 3431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 182079 - 182202
Alignment:
Q  102 gtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaaattataaattaaagttactact 201  Q
    ||||| |||||||||||||||| ||||||||| |||||||||| |||||||| ||||||||||||||||||||||||| ||  |||| || | |||||||    
T  182079 gtaaccaaaagtagtaattttttattgaaaacaaacaattatttattaaaagttacatatttaatataaaaaacacaagtttcaaatcaacg-tactact 182177  T
Q  202 ttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||||| ||||||    
T  182178 ttaaacttcttaacatgtacaaatt 182202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 37294 - 37132
Alignment:
Q  65 gggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatattt 163  Q
    |||||||| |||||||||||| |||||| || ||||| || |||||||||||||||||| |||||||| ||| | ||||| ||| |||||||||||||||    
T  37294 gggtttgtctaacatgtgcaacattgcacatgttaagatatctaaaagtagtaattttttattgaaaaacaaaacttatttattaaaaagctacatattt 37195  T
Q  164 aatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    ||||| |||  ||||| ||  || | |||||||  ||||||||||||||||||||||||||||    
T  37194 aatatgaaatgcacaagttccaagtcaaagttatcactttaaacttcttaacatgtgcaaatt 37132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 43458 - 43624
Alignment:
Q  63 aagggtttgtgtaacatgtg--caatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacata 160  Q
    |||||||| | |||||||||  ||||||||||  | ||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||| || |||    
T  43458 aagggtttctctaacatgtgagcaatattgcacgtgttaaggtaa-taaaagtagtaatttttcattgaaaatcaacaattattaattaaaagttatata 43556  T
Q  161 tttaatataaaaaacacaaattataaattaaagttactacttt--aaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||| | || || ||| ||||||||| | ||||  |||||||||||||| | ||||||    
T  43557 tttaatataaaaaatataagttttaagttaaagttattgctttaaaaacttcttaacatattcaaatt 43624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 191454 - 191379
Alignment:
Q  104 aactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatatttaatataaaaaacacaa 179  Q
    |||||||||| |||||||||||||||||||   | |||||| |||||||  || ||||||||||||||| ||||||    
T  191454 aactaaaagtggtaatttttcattgaaaacatccgattatttattaaaaattatatatttaatataaaatacacaa 191379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 108 - 226
Target Start/End: Complemental strand, 8550 - 8432
Alignment:
Q  108 aaaagtagtaatttttcattgaaaaccaacaattattgattaaaag-ctacatatttaatataaaaaacacaaattataaattaaagttactactttaaa 206  Q
    ||||||| |||||||| ||||||||| |||||||||| |||||||  ||||| |||||||||||||  ||||| || ||||| |||||||||||||||||    
T  8550 aaaagtattaattttttattgaaaac-aacaattatttattaaaaaactacaaatttaatataaaatgcacaagttctaaatcaaagttactactttaaa 8452  T
Q  207 cttcttaacatgtgcaaatt 226  Q
     |||||||||| ||||||||    
T  8451 tttcttaacatatgcaaatt 8432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 16716 - 16553
Alignment:
Q  63 aagggtttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgattaaaagctacatat- 161  Q
    |||||||||| |||||| ||||| ||||||||| |||| |||||||||||  | || | || |||| ||| ||||||||||| |||||||  |  ||||     
T  16716 aagggtttgtctaacatttgcaaaattgcatatgttaaagtaactaaaagcggcaactatttattggaaaacaacaattatttattaaaaattt-atata 16618  T
Q  162 ttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| |||| |||||| ||  |||| |||  || |||||||||||||||||||||||||||||    
T  16617 ttaatagaaaatacacaagttccaaatcaaacatattactttaaacttcttaacatgtgcaaatt 16553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 94195 - 94036
Alignment:
Q  68 tttgtgtaacatgtgcaatattgcatatattaaggtaactaaaagtagtaatttttcattgaaaaccaacaattattgatt-aaaagctacatatttaat 166  Q
    ||||| |||||| ||||| |||||| || ||||   ||||||||||||||| |||| ||||||||| || ||||||| ||| |||| ||| |||||||||    
T  94195 tttgtctaacatatgcaacattgcacatgttaaatcaactaaaagtagtaagtttttattgaaaactaataattatttattaaaaaactatatatttaat 94096  T
Q  167 ataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    | ||||   | || ||  ||  |||||||| || || |||||||||||||| ||||||||    
T  94095 acaaaatgtataagttccaatgtaaagttagtatttaaaacttcttaacatatgcaaatt 94036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 158 - 226
Target Start/End: Complemental strand, 1529 - 1461
Alignment:
Q  158 atatttaatataaaaaacacaaattataaattaaagttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||||||||||||   ||||||| |||  |||| |||||  ||||||||||||||||||||||||||    
T  1529 atatttaatataaaatgaacaaattttaagataaaattactcttttaaacttcttaacatgtgcaaatt 1461  T

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Target: scaffold0192 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 226
Target Start/End: Complemental strand, 13613 - 13581
Alignment:
Q  194 ttactactttaaacttcttaacatgtgcaaatt 226  Q
    |||||| ||||||||||||||||||||||||||    
T  13613 ttactaatttaaacttcttaacatgtgcaaatt 13581  T

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