View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11144_high_30 (Length: 234)
Name: NF11144_high_30
Description: NF11144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11144_high_30 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 10 - 234
Target Start/End: Original strand, 21469039 - 21469263
Alignment:
| Q |
10 |
agatggacatcacattgttgattgggttagacaaaaaagaggtggagttgaagtgctcgatgaaagcttaagagcaaggccagaatccgaaattgaagaa |
109 |
Q |
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| T |
21469039 |
agatggacttcacattgttgattgggttagacaaaaaagaggtggagttgaagtgctcgatgaaagcttaagagcaaggccagaatctgaaatcgaagaa |
21469138 |
T |
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| Q |
110 |
atgttgcagactttaggtgttgctttgttatgtgtaactccaagtccagatgatagaccgacaatgaaagatgtggtcgcaatgatgaaagagattaaac |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21469139 |
atgttgcagactttaggtgttgctttgttatgtgtaactccaagtccagatgatagaccgacaatgaaagatgtggtcgcaatgatgaaagagattaaac |
21469238 |
T |
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| Q |
210 |
aggagagagatgaatgtgtgaaagt |
234 |
Q |
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| T |
21469239 |
aggagagagatgaatgtgtgaaagt |
21469263 |
T |
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