View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11144_low_6 (Length: 482)

Name: NF11144_low_6
Description: NF11144
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11144_low_6
NF11144_low_6
[»] chr2 (35 HSPs)
chr2 (19-446)||(15390322-15390739)
chr2 (94-421)||(18135833-18136150)
chr2 (263-419)||(29710982-29711136)
chr2 (177-445)||(15825093-15825350)
chr2 (178-445)||(10923061-10923318)
chr2 (263-445)||(3586301-3586483)
chr2 (264-426)||(19050407-19050569)
chr2 (309-417)||(45714961-45715069)
chr2 (267-399)||(24157281-24157413)
chr2 (308-445)||(29137839-29137976)
chr2 (266-415)||(36267466-36267615)
chr2 (263-395)||(24499777-24499909)
chr2 (265-417)||(45258125-45258277)
chr2 (263-417)||(12168938-12169093)
chr2 (263-401)||(24318895-24319032)
chr2 (266-396)||(18772239-18772365)
chr2 (326-446)||(20120284-20120404)
chr2 (308-399)||(18770296-18770389)
chr2 (263-417)||(19919037-19919191)
chr2 (345-414)||(12127716-12127785)
chr2 (285-422)||(27846512-27846649)
chr2 (349-402)||(12634827-12634880)
chr2 (348-401)||(28426178-28426231)
chr2 (349-417)||(17671939-17672007)
chr2 (342-410)||(24755441-24755509)
chr2 (144-215)||(29743964-29744035)
chr2 (178-251)||(30638659-30638732)
chr2 (349-417)||(17626867-17626935)
chr2 (266-305)||(19290545-19290584)
chr2 (178-249)||(29138026-29138097)
chr2 (342-445)||(30638501-30638604)
chr2 (348-422)||(36022422-36022496)
chr2 (180-249)||(19050333-19050402)
chr2 (347-403)||(148719-148775)
chr2 (348-388)||(5186975-5187015)
[»] chr4 (26 HSPs)
chr4 (72-445)||(15741943-15742306)
chr4 (264-409)||(15514533-15514678)
chr4 (100-383)||(16012290-16012562)
chr4 (263-417)||(5518506-5518660)
chr4 (263-415)||(12683753-12683905)
chr4 (263-422)||(19643663-19643822)
chr4 (263-417)||(47253243-47253397)
chr4 (266-397)||(14601989-14602120)
chr4 (265-400)||(1638291-1638425)
chr4 (263-401)||(17110680-17110817)
chr4 (263-401)||(29157084-29157222)
chr4 (266-422)||(13896453-13896609)
chr4 (263-399)||(25066128-25066264)
chr4 (265-400)||(19563945-19564079)
chr4 (332-397)||(13171065-13171130)
chr4 (263-415)||(19809670-19809821)
chr4 (352-414)||(3981919-3981981)
chr4 (332-444)||(14003104-14003216)
chr4 (319-414)||(10981835-10981930)
chr4 (263-399)||(18463784-18463920)
chr4 (349-411)||(26894778-26894840)
chr4 (178-251)||(17746053-17746126)
chr4 (266-382)||(12415437-12415552)
chr4 (204-251)||(23350600-23350647)
chr4 (348-393)||(50151858-50151903)
chr4 (348-395)||(1723949-1723997)
[»] chr7 (29 HSPs)
chr7 (95-444)||(13291936-13292275)
chr7 (81-445)||(16986891-16987245)
chr7 (178-445)||(9135257-9135514)
chr7 (263-401)||(5925446-5925584)
chr7 (264-406)||(34854220-34854362)
chr7 (263-415)||(12644753-12644906)
chr7 (332-444)||(9867979-9868091)
chr7 (266-401)||(18773963-18774098)
chr7 (269-401)||(7486527-7486659)
chr7 (272-381)||(5928991-5929100)
chr7 (264-402)||(1979043-1979181)
chr7 (263-398)||(4781471-4781605)
chr7 (263-398)||(4813902-4814036)
chr7 (308-445)||(39879325-39879462)
chr7 (263-401)||(10287567-10287705)
chr7 (343-414)||(21161211-21161281)
chr7 (263-401)||(26762882-26763020)
chr7 (264-399)||(20034300-20034434)
chr7 (263-414)||(29373415-29373566)
chr7 (263-416)||(5863154-5863307)
chr7 (264-322)||(12265097-12265155)
chr7 (319-416)||(9573453-9573550)
chr7 (350-422)||(25173861-25173933)
chr7 (342-401)||(17149944-17150002)
chr7 (355-401)||(12265155-12265201)
chr7 (351-393)||(16363424-16363466)
chr7 (348-381)||(27803370-27803403)
chr7 (263-296)||(43172007-43172040)
chr7 (342-422)||(13159334-13159414)
[»] chr5 (27 HSPs)
chr5 (177-445)||(22865699-22865957)
chr5 (146-445)||(25537343-25537632)
chr5 (81-438)||(24546292-24546634)
chr5 (177-423)||(25828883-25829119)
chr5 (263-399)||(24647272-24647408)
chr5 (337-445)||(31202473-31202581)
chr5 (263-377)||(26994577-26994691)
chr5 (263-401)||(26348062-26348188)
chr5 (267-414)||(22903062-22903209)
chr5 (319-422)||(8938871-8938976)
chr5 (263-401)||(18799762-18799899)
chr5 (263-403)||(18803898-18804037)
chr5 (178-298)||(31202271-31202381)
chr5 (327-417)||(16621174-16621264)
chr5 (345-399)||(26163619-26163673)
chr5 (267-408)||(25333710-25333851)
chr5 (266-399)||(32418460-32418593)
chr5 (348-428)||(7449747-7449827)
chr5 (263-315)||(21213311-21213363)
chr5 (365-400)||(30827053-30827088)
chr5 (348-422)||(4477159-4477233)
chr5 (263-413)||(20025253-20025403)
chr5 (347-417)||(27083292-27083362)
chr5 (353-417)||(227739-227803)
chr5 (342-422)||(19846030-19846110)
chr5 (265-297)||(25679219-25679251)
chr5 (178-243)||(25333865-25333932)
[»] chr3 (32 HSPs)
chr3 (143-415)||(12516153-12516416)
chr3 (177-417)||(14859994-14860224)
chr3 (267-445)||(12731536-12731714)
chr3 (178-445)||(25495877-25496133)
chr3 (178-412)||(431212-431436)
chr3 (264-430)||(12108372-12108538)
chr3 (265-446)||(1770762-1770944)
chr3 (337-439)||(21649357-21649459)
chr3 (300-429)||(12251942-12252071)
chr3 (75-248)||(12256952-12257125)
chr3 (264-410)||(9801056-9801201)
chr3 (263-380)||(16704405-16704522)
chr3 (267-380)||(17143724-17143837)
chr3 (263-380)||(30606931-30607048)
chr3 (270-422)||(2311812-2311964)
chr3 (263-420)||(20122750-20122908)
chr3 (338-415)||(8122960-8123037)
chr3 (263-403)||(20118948-20119088)
chr3 (337-412)||(17485669-17485744)
chr3 (319-439)||(21652587-21652706)
chr3 (267-422)||(20622367-20622524)
chr3 (265-410)||(21342260-21342405)
chr3 (178-249)||(7835470-7835541)
chr3 (348-395)||(9007832-9007879)
chr3 (263-422)||(28723745-28723904)
chr3 (337-421)||(17396696-17396781)
chr3 (348-406)||(35314178-35314236)
chr3 (349-410)||(1475722-1475783)
chr3 (308-417)||(13085089-13085198)
chr3 (365-422)||(30429972-30430029)
chr3 (143-231)||(12731422-12731510)
chr3 (266-298)||(17396808-17396840)
[»] chr6 (39 HSPs)
chr6 (147-445)||(31295400-31295688)
chr6 (265-445)||(9403115-9403290)
chr6 (266-439)||(22497272-22497445)
chr6 (265-445)||(19730564-19730743)
chr6 (263-445)||(12449554-12449736)
chr6 (177-413)||(34064165-34064391)
chr6 (263-444)||(19277047-19277234)
chr6 (208-430)||(27860874-27861086)
chr6 (263-400)||(12424285-12424422)
chr6 (264-417)||(16343545-16343698)
chr6 (266-422)||(12487970-12488126)
chr6 (264-411)||(20148289-20148434)
chr6 (264-411)||(22184394-22184539)
chr6 (263-401)||(19305446-19305584)
chr6 (269-422)||(23768154-23768307)
chr6 (263-446)||(33596798-33596981)
chr6 (263-377)||(14921232-14921346)
chr6 (265-435)||(18147254-18147424)
chr6 (342-411)||(19331730-19331799)
chr6 (319-400)||(25008417-25008498)
chr6 (264-410)||(34187272-34187413)
chr6 (263-401)||(13823349-13823486)
chr6 (263-410)||(22572018-22572164)
chr6 (345-414)||(30680961-30681030)
chr6 (308-403)||(14080464-14080558)
chr6 (263-397)||(18566643-18566777)
chr6 (319-411)||(9277327-9277419)
chr6 (337-401)||(9292064-9292128)
chr6 (265-421)||(11087464-11087620)
chr6 (347-439)||(31125213-31125305)
chr6 (265-304)||(14184529-14184568)
chr6 (358-445)||(31423894-31423981)
chr6 (263-393)||(689829-689958)
chr6 (353-401)||(14184604-14184652)
chr6 (263-317)||(18994045-18994099)
chr6 (180-230)||(22497196-22497246)
chr6 (263-297)||(31423808-31423842)
chr6 (352-401)||(11714154-11714203)
chr6 (385-417)||(22692069-22692101)
[»] chr1 (30 HSPs)
chr1 (75-443)||(23728613-23728970)
chr1 (267-445)||(4601462-4601640)
chr1 (263-422)||(25408057-25408216)
chr1 (313-445)||(14255051-14255183)
chr1 (263-419)||(26977704-26977860)
chr1 (265-418)||(12177351-12177504)
chr1 (263-431)||(21682561-21682729)
chr1 (178-430)||(16299479-16299711)
chr1 (263-399)||(3590811-3590947)
chr1 (265-401)||(21098819-21098954)
chr1 (263-447)||(52565516-52565700)
chr1 (264-415)||(22414743-22414894)
chr1 (308-414)||(33101523-33101629)
chr1 (265-422)||(34273048-34273205)
chr1 (265-401)||(1659762-1659898)
chr1 (265-417)||(16050360-16050512)
chr1 (342-417)||(48637516-48637592)
chr1 (355-422)||(5459771-5459838)
chr1 (348-422)||(8018910-8018984)
chr1 (263-417)||(16030361-16030515)
chr1 (308-422)||(5671731-5671845)
chr1 (346-416)||(2140998-2141068)
chr1 (267-399)||(23280237-23280367)
chr1 (319-414)||(18246112-18246207)
chr1 (348-401)||(46016097-46016149)
chr1 (332-399)||(16522759-16522826)
chr1 (263-298)||(48637624-48637659)
chr1 (264-298)||(14255014-14255048)
chr1 (348-422)||(43344498-43344572)
chr1 (351-399)||(30732501-30732549)
[»] scaffold0002 (2 HSPs)
scaffold0002 (144-445)||(379654-379945)
scaffold0002 (263-377)||(120982-121096)
[»] scaffold0205 (2 HSPs)
scaffold0205 (72-418)||(22851-23187)
scaffold0205 (266-439)||(10889-11062)
[»] scaffold0380 (1 HSPs)
scaffold0380 (186-445)||(6764-7013)
[»] chr8 (25 HSPs)
chr8 (264-400)||(24576555-24576691)
chr8 (263-413)||(3459455-3459604)
chr8 (267-401)||(4565368-4565502)
chr8 (264-422)||(18322904-18323062)
chr8 (265-445)||(21416676-21416856)
chr8 (337-415)||(15058003-15058081)
chr8 (171-423)||(11776132-11776366)
chr8 (337-417)||(17927749-17927829)
chr8 (332-418)||(17319659-17319748)
chr8 (263-417)||(26916869-26917023)
chr8 (337-401)||(14666884-14666948)
chr8 (263-413)||(30477611-30477761)
chr8 (265-422)||(24507418-24507575)
chr8 (267-330)||(23243837-23243900)
chr8 (359-437)||(20055525-20055603)
chr8 (303-417)||(24677598-24677712)
chr8 (325-422)||(23269207-23269304)
chr8 (326-400)||(1909742-1909816)
chr8 (263-324)||(20055623-20055683)
chr8 (264-395)||(13754746-13754877)
chr8 (342-411)||(5859787-5859856)
chr8 (181-250)||(24070950-24071019)
chr8 (263-394)||(17698256-17698387)
chr8 (263-297)||(16214713-16214747)
chr8 (271-376)||(6928069-6928174)
[»] scaffold0103 (1 HSPs)
scaffold0103 (263-414)||(40765-40916)
[»] scaffold0013 (1 HSPs)
scaffold0013 (264-403)||(4396-4535)
[»] scaffold0294 (1 HSPs)
scaffold0294 (263-375)||(213-326)
[»] scaffold0005 (1 HSPs)
scaffold0005 (266-397)||(215258-215389)
[»] scaffold0479 (2 HSPs)
scaffold0479 (265-445)||(4978-5156)
scaffold0479 (143-243)||(5168-5268)
[»] scaffold0140 (1 HSPs)
scaffold0140 (263-400)||(6281-6418)
[»] scaffold0464 (1 HSPs)
scaffold0464 (267-445)||(11454-11628)
[»] scaffold0074 (1 HSPs)
scaffold0074 (309-445)||(35191-35327)
[»] scaffold0505 (1 HSPs)
scaffold0505 (308-422)||(7846-7960)
[»] scaffold0092 (1 HSPs)
scaffold0092 (266-439)||(21592-21765)
[»] scaffold0360 (1 HSPs)
scaffold0360 (265-422)||(13885-14040)
[»] scaffold0096 (1 HSPs)
scaffold0096 (264-401)||(42231-42367)
[»] scaffold0291 (2 HSPs)
scaffold0291 (265-377)||(15403-15515)
scaffold0291 (308-422)||(8593-8706)
[»] scaffold0263 (1 HSPs)
scaffold0263 (263-413)||(20468-20618)
[»] scaffold0101 (1 HSPs)
scaffold0101 (332-414)||(10758-10840)
[»] scaffold0174 (1 HSPs)
scaffold0174 (345-414)||(29329-29398)
[»] scaffold0023 (1 HSPs)
scaffold0023 (264-429)||(95782-95946)
[»] scaffold0518 (1 HSPs)
scaffold0518 (264-444)||(8910-9093)
[»] scaffold0054 (1 HSPs)
scaffold0054 (264-384)||(68774-68892)
[»] scaffold0022 (1 HSPs)
scaffold0022 (349-401)||(69281-69333)
[»] scaffold0034 (1 HSPs)
scaffold0034 (348-422)||(18526-18600)
[»] scaffold0438 (1 HSPs)
scaffold0438 (360-445)||(4321-4402)


Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 19 - 446
Target Start/End: Original strand, 15390322 - 15390739
Alignment:
Q  19 ttatatataggaaaaactagtagaagaccaactgcaagctgacatgtggccagactgcacgctgacacgtggccagacttgcaccgcataaagactccgc 118  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  15390322 ttatgtataggaaaaactagtagaagactaactgcaagctgacatgtggccagactgcacgctgacacgtgtccagacttgcaccgcctaaagactccgc 15390421  T
Q  119 atccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacac 218  Q
    |||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15390422 atccaaaggaacacgccagattgcatgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtcctgctccgtccctaatcacac 15390521  T
Q  219 gtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaa 318  Q
     |||||||||||||||||||||||||||         ||| || |||||||||||||||||||||||||||||||||||| ||||||| ||||||||||     
T  15390522 atcgcataacccggggacggttatggcc---------tacgcg-cgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaac 15390611  T
Q  319 acttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccg 418  Q
    |||||||||||| | ||  | | |||||| ||| |||||||||||  ||||||||||||||   | ||| ||||||||||| | |||||||||||||| |    
T  15390612 acttcttacacactgtttattagttccatcacttacttgagcgtcaaagtgctaacgtgccaataggcagctttcgttccatcgcgaagactcatcgctg 15390711  T
Q  419 ccgtgtcggaagccattaccgtcacact 446  Q
    ||||| |||||||| |||||||||||||    
T  15390712 ccgtgccggaagccgttaccgtcacact 15390739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 94 - 421
Target Start/End: Complemental strand, 18136150 - 18135833
Alignment:
Q  94 gacttgcaccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacg 193  Q
    |||||||||||| | ||||||||||| | |||||| ||||| | ||||  ||||||||||  ||||| | |||||| ||  | ||||||||||||||| |    
T  18136150 gacttgcaccgccttaagactccgcacctaaaggagcacgctagattgcgtgcaccgtgctgcacagaagctcgccgtcgcgcaaggatcaccctacatg 18136051  T
Q  194 tgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgt-cgcctatataagggtgaacttgcttcaccc 292  Q
    |||| ||| ||||||||||||||||||||||| ||  || ||| ||  ||||||||           || |||||||||||||||||||||||||||||     
T  18136050 tgtcctgcaccgtccctaatcacacgtcgcattacgtggagacagtagtggccaac-----------gtgcgcctatataagggtgaacttgcttcacct 18135962  T
Q  293 tcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcaccttt 392  Q
    || ||| | ||||| ||||| |||| |||||||||||| |||| |||| |||||||||| ||||||||||| |||| ||||||||||| || ||||||||    
T  18135961 tctaggtatacatcacttttgacaacacttcttacacactctttctcagttccattactaacttgagcgtcagagtactaacgtgcctacaggcaccttt 18135862  T
Q  393 cgttccaccacgaagactcatcgccgccg 421  Q
    | | |||||  ||||||||| ||||||||    
T  18135861 catcccaccgtgaagactcaacgccgccg 18135833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 263 - 419
Target Start/End: Complemental strand, 29711136 - 29710982
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||| |||||  ||||  |||||||||||| ||||||||||||    
T  29711136 cgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcgtacactctctt--tcaattccattagtgacttgagcgt 29711039  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgc 419  Q
     ||||||||||||||| ||||| ||||||| |||||||| ||||||| |||||||||    
T  29711038 tggagtgctaacgtgcatgcatacaccttttgttccaccgcgaagacgcatcgccgc 29710982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 177 - 445
Target Start/End: Complemental strand, 15825350 - 15825093
Alignment:
Q  177 aaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataaggg 276  Q
    ||||||||||||||| ||||| | |||||||| ||| |||||| |||||||| ||  |||||||||| ||||| |           |||||||| |||||    
T  15825350 aaggatcaccctacatgtgtcctactccgtccttaaacacacgccgcataactcgaagacggttatgaccaacgcg----------cgcctatacaaggg 15825261  T
Q  277 tgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgt 376  Q
    |||||||||||||||||||||| ||||||  |||||||||| ||||  |||||| |||| |||| ||||||||| ||||||||||||  |||||||||||    
T  15825260 tgaacttgcttcaccctcaaggtacacatgacttttcacaacactttctacacactctttctcagttccattaccgacttgagcgtcaaagtgctaacgt 15825161  T
Q  377 gcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||||||  ||| |||||||||||||| ||||||| |  |||||||| ||| |||||||| ||||||||    
T  15825160 gcctgcagacacatttcgttccaccacaaagactc-ttaccgccgtgccggtagccattatcgtcacac 15825093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 178 - 445
Target Start/End: Original strand, 10923061 - 10923318
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggt 277  Q
    |||||||||||||||||||| |  |||||| ||||||||||| ||||||| |||  ||| |||||| |||||||       ||||    |||||||||||    
T  10923061 aggatcaccctacacgtgtcctcttccgtctctaatcacacgccgcataagccgaagactgttatgaccaacac-------acgtg---tatataagggt 10923150  T
Q  278 gaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtg 377  Q
    ||||||||||||||||||||| |||| || |||||||||  ||||  |||||| ||||  | | |||||| ||||||||||| ||||||||| |||||||    
T  10923151 gaacttgcttcaccctcaaggcacacttcacttttcacagcactttctacacactctttataagttccataactgacttgagtgtcggagtgataacgtg 10923250  T
Q  378 cctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    ||| ||| |||||||||||||||| |||||||| ||| || ||||  ||||  |||||||||||||||    
T  10923251 cctacatacacctttcgttccaccgcgaagactaatcaccaccgttccggagaccattaccgtcacac 10923318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 263 - 445
Target Start/End: Complemental strand, 3586483 - 3586301
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||||||||||||||||||||| |    || |||||||||| ||||  ||| || | || |||| |||||||||||||||||||||    
T  3586483 cgcctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttctactcactttttctcagttccattactgacttgagcgt 3586384  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||||| |||||||||| ||||||||||||| ||||||| | |||||||| || ||||||  ||||| || | ||||||||||    
T  3586383 cggagtcctaacgtgccggcatgcacctttcattccaccgcaaagactcaacgtcgccgtaccggaaaccttcaccgtcacac 3586301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 426
Target Start/End: Original strand, 19050407 - 19050569
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    |||||||||||||||||||| |||||| |||| || ||||||| |||||||||| |||||||||||  |||| || | ||| ||||||||||||||||||    
T  19050407 gcctatataagggtgaacttacttcactctcagggtacacatcacttttcacaacacttcttacactctctttcttagttctattactgacttgagcgtc 19050506  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcg 426  Q
     ||||||||||| | |||||   ||||||||||||||| |||| ||||||||| | |||||||    
T  19050507 agagtgctaacgggtctgcaaatacctttcgttccaccgcgaacactcatcgctgtcgtgtcg 19050569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 309 - 417
Target Start/End: Complemental strand, 45715069 - 45714961
Alignment:
Q  309 ttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaaga 408  Q
    ||||||| | |||| ||||||| |||| |||| || |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  45715069 ttttcaccacactttttacacactctttctcagtttcattactgacttgagcgttggagtgctaacgtgcctgcatgcacctttcgttccaccaggaaga 45714970  T
Q  409 ctcatcgcc 417  Q
    |||||||||    
T  45714969 ctcatcgcc 45714961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 267 - 399
Target Start/End: Original strand, 24157281 - 24157413
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    |||||||||||||||||||||||||||||||| |||||   |||||||||| |||||||| ||  | |  |||| |||||||||||||||||||||| ||    
T  24157281 tatataagggtgaacttgcttcaccctcaaggtacacaatacttttcacaacacttcttagactttatctctcagttccattactgacttgagcgtcaga 24157380  T
Q  367 gtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    |||||||||||| || | |||||||||||||||    
T  24157381 gtgctaacgtgcatgtaggcacctttcgttcca 24157413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 445
Target Start/End: Complemental strand, 29137976 - 29137839
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaag 407  Q
    |||| ||||| | |||||||||| |||| |||| || ||||| ||||||||||||||| |||||||||| ||||||  || ||||||||||||| ||| |    
T  29137976 ctttccacaacatttcttacacactctttctcagttgcattaatgacttgagcgtcggtgtgctaacgtacctgcagacatctttcgttccacctcgatg 29137877  T
Q  408 actcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||||||| ||||||| |||||||| ||||| ||||||    
T  29137876 actcatcgtcgccgtgccggaagccgttaccatcacac 29137839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 266 - 415
Target Start/End: Complemental strand, 36267615 - 36267466
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    ||||||||||||||||||||||||||||||||| |    || ||||||||||  |||  |||||| |||| |||| || |||||||||||||||||| ||    
T  36267615 ctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaaccctttctacacactctttctcagtttcattactgacttgagcgttgg 36267516  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcg 415  Q
    |||| |||| ||| |||| ||||||||| ||||||  |||||||||||||    
T  36267515 agtgttaacatgcatgcaggcacctttcattccactgcgaagactcatcg 36267466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 263 - 395
Target Start/End: Complemental strand, 24499909 - 24499777
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||| ||||||||||||||||||||||||| |||| |    || |||||||||| | ||  |||||| |||| |||| |||||||||||||||||||||    
T  24499909 cgcctttataagggtgaacttgcttcacccttaaggtatgattcacttttcacaacattttctacacactctttctcatttccattactgacttgagcgt 24499810  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgt 395  Q
     ||||||||||||| |||  | |||||||||||    
T  24499809 tggagtgctaacgttcctagaggcacctttcgt 24499777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 417
Target Start/End: Original strand, 45258125 - 45258277
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||  ||||||||||||||||| |    || |||||||||| ||||   ||||| |||| || | || ||||||| |||||||| | |    
T  45258125 cctatataagggtgactttgcttcaccctcaaggtatgattcacttttcacaacactttcgacacattctttcttagtttcattacttacttgagctttg 45258224  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    ||||| |||||||||||||  || ||||||||||||| |||||||||||||||    
T  45258225 gagtgttaacgtgcctgcagacatctttcgttccaccgcgaagactcatcgcc 45258277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 417
Target Start/End: Complemental strand, 12169093 - 12168938
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttg-agcg 361  Q
    ||||||| ||||||||   ||||||||||||||||| | |  || |||||||||| ||||  |||||| |||| || | |||||||||||||||| ||||    
T  12169093 cgcctatttaagggtggcattgcttcaccctcaaggtataattcacttttcacaacactttctacacactctttcttagttccattactgacttgaagcg 12168994  T
Q  362 tcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    | |||||| ||| |||||||||  |||||||||||||||| | |||||| ||||||    
T  12168993 ttggagtgttaatgtgcctgcagacacctttcgttccaccgcaaagacttatcgcc 12168938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 401
Target Start/End: Complemental strand, 24319032 - 24318895
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||||||||||||||||||| | ||||| | ||||||||||  || || | ||  |  | | || |||||||||| |||||| |||    
T  24319032 cgcctatataagggtgaacttgcttcaccctcaatgtacacaacacttttcacaactctcctaagacttttctcc-cagttccattactaacttgatcgt 24318934  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||| |||||||||||||||| || ||||||||||||||    
T  24318933 cggaatgctaacgtgcctgcaggcgcctttcgttccacc 24318895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 266 - 396
Target Start/End: Complemental strand, 18772365 - 18772239
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    |||||||||||||||||||||||||||||||||  ||| || |||||||||| ||||  |||||| ||||    | ||||||||||   |||||| || |    
T  18772365 ctatataagggtgaacttgcttcaccctcaaggtgcacgtcacttttcacaacactttctacacactctt----agttccattactactttgagcatcag 18772270  T
Q  366 agtgctaacgtgcctgcatgcacctttcgtt 396  Q
    ||||||||||||||||||  |||||||||||    
T  18772269 agtgctaacgtgcctgcaaacacctttcgtt 18772239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 326 - 446
Target Start/End: Complemental strand, 20120404 - 20120284
Alignment:
Q  326 acacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtc 425  Q
    ||||| |||| |||| || ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||  ||||| | | | ||  |||| |    
T  20120404 acacactctttctcagtttcattactgacttgagagtcggagtgctaacgtgcctgcagacacctttcgttccaccgtgaagatttaacaccagcgtgcc 20120305  T
Q  426 ggaagccattaccgtcacact 446  Q
    | ||||| |||||||||||||    
T  20120304 gaaagccgttaccgtcacact 20120284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 399
Target Start/End: Complemental strand, 18770389 - 18770296
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcc--tgcatgcacctttcgttcca 399  Q
    |||||||||| ||||  |||||| |||| ||||||| ||||||||||||||||||| |||||||||||||||  || | |||||||||||||||    
T  18770389 cttttcacaacactttctacacactctttctcaatttcattactgacttgagcgtcagagtgctaacgtgcctatgtaggcacctttcgttcca 18770296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 417
Target Start/End: Original strand, 19919037 - 19919191
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||| ||||  |||||||| |||||||| |    || |||||||||| ||||  |||| | |||| |||| |||||||| ||||||  ||||    
T  19919037 cgcctatataagagtgatattgcttcatcctcaaggtatgattcacttttcacaacactttctacatactctttctcatttccattattgactttggcgt 19919136  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
      |||| |||| || |||||| |||||||||||||||||||||||||| ||||||    
T  19919137 tagagttctaatgttcctgcaggcacctttcgttccaccacgaagactgatcgcc 19919191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 12127716 - 12127785
Alignment:
Q  345 cattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||||||||||||||||| |||||||||||||||||||| | ||||||||| ||||| ||||||| ||||    
T  12127716 cattactgacttgagcgttggagtgctaacgtgcctgcaggtacctttcgtcccaccgcgaagacccatc 12127785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 285 - 422
Target Start/End: Original strand, 27846512 - 27846649
Alignment:
Q  285 cttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcat 384  Q
    |||||||||||||| |||  || |||| ||||| ||||  |||| | | || |||| ||||||||||||||||| ||| ||||||||||||||||||||     
T  27846512 cttcaccctcaaggtacaattcactttacacaacactttctacaaactgtttctcagttccattactgacttgatcgttggagtgctaacgtgcctgcag 27846611  T
Q  385 gcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||| |||||| | ||  ||||||||||| ||| ||||    
T  27846612 gcacttttcgtccaactgcgaagactcattgccaccgt 27846649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 402
Target Start/End: Complemental strand, 12634880 - 12634827
Alignment:
Q  349 actgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacca 402  Q
    |||||||| || || |||||| ||||||||||||||||||||||||||||||||    
T  12634880 actgacttaagagttggagtgttaacgtgcctgcatgcacctttcgttccacca 12634827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 348 - 401
Target Start/End: Original strand, 28426178 - 28426231
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    ||||||||||| | |||||||||||| ||||||||| |||||||||||||||||    
T  28426178 tactgacttgatcatcggagtgctaatgtgcctgcaggcacctttcgttccacc 28426231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 17672007 - 17671939
Alignment:
Q  349 actgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    ||||| |||||| | |||| ||||||||| |||||  ||||||||||||||||| ||||||||||||||    
T  17672007 actgatttgagcattggagcgctaacgtgtctgcagacacctttcgttccaccatgaagactcatcgcc 17671939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 24755509 - 24755441
Alignment:
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagact 410  Q
    |||||| ||||||||||| || ||||| ||||||||| || ||||| ||||||||||| ||||||||||    
T  24755509 ttccatcactgacttgagggttggagtactaacgtgcttgtatgcaactttcgttccaacacgaagact 24755441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 144 - 215
Target Start/End: Original strand, 29743964 - 29744035
Alignment:
Q  144 tgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtcttgctccgtccctaatca 215  Q
    ||||||||||||||| ||| | ||| |||  |  |||||||||||||||||||| |||||||||||||||||    
T  29743964 tgcaccgtgccacacgggagcgcgctctcgcgctaggatcaccctacacgtgtcctgctccgtccctaatca 29744035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 251
Target Start/End: Complemental strand, 30638732 - 30638659
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacac 251  Q
    ||||||||| |||||||||| | |||| |||||||||||| | |||||||||||  ||| |||||| |||||||    
T  30638732 aggatcaccttacacgtgtcctcctccatccctaatcacatgccgcataacccgcagacagttatgaccaacac 30638659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 349 - 417
Target Start/End: Complemental strand, 17626935 - 17626867
Alignment:
Q  349 actgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    ||||| |||||| | |||| ||||||||| |||||  |||||||||||||||||  |||||||||||||    
T  17626935 actgatttgagcattggagagctaacgtgtctgcagacacctttcgttccaccataaagactcatcgcc 17626867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 305
Target Start/End: Complemental strand, 19290584 - 19290545
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacat 305  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  19290584 ctatataagggtgaacttgcttcacccttaaggtacacat 19290545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 178 - 249
Target Start/End: Complemental strand, 29138097 - 29138026
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaac 249  Q
    ||||| |||||||||||||  | |||||||||||||||||||  ||||||| ||| || ||||||| |||||    
T  29138097 aggattaccctacacgtgtactactccgtccctaatcacacgcagcataactcggagatggttatgaccaac 29138026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 445
Target Start/End: Complemental strand, 30638604 - 30638501
Alignment:
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtc 441  Q
    ||||||||||||| ||||||||| |||| ||||||| ||| |  || ||||| ||||||| ||| |||||| | || || |  | |||||||||||||||    
T  30638604 ttccattactgacatgagcgtcgaagtgttaacgtgtctgtagacatctttctttccaccgcgatgactcaacaccaccctaccagaagccattaccgtc 30638505  T
Q  442 acac 445  Q
    ||||    
T  30638504 acac 30638501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 422
Target Start/End: Complemental strand, 36022496 - 36022422
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||||||||||||||  ||||| |||||||||| |||  ||||||||||| || || ||||||||| ||| ||||    
T  36022496 tactgacttgagcgttagagtgttaacgtgcctacatatacctttcgttctactacaaagactcattgccaccgt 36022422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 19050333 - 19050402
Alignment:
Q  180 gatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaac 249  Q
    ||||||||||||| |||| |||||| | |||||||| ||| |||||||||||| |   ||||||||||||    
T  19050333 gatcaccctacacatgtcctgctccatgcctaatcatacgccgcataacccggagttagttatggccaac 19050402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 347 - 403
Target Start/End: Complemental strand, 148775 - 148719
Alignment:
Q  347 ttactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccac 403  Q
    ||||| ||||||| || ||||||||||||||||| || | ||||| |||||||||||    
T  148775 ttactaacttgagtgttggagtgctaacgtgcctacaagaaccttacgttccaccac 148719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 388
Target Start/End: Original strand, 5186975 - 5187015
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcac 388  Q
    |||||||||||||||||||||| |||||||| |||| ||||    
T  5186975 tactgacttgagcgtcggagtggtaacgtgcttgcaggcac 5187015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 160; Significance: 4e-85; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 72 - 445
Target Start/End: Original strand, 15741943 - 15742306
Alignment:
Q  72 actgcacgctgacacgtggccagacttgcaccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcg-ccc 170  Q
    ||||||||| |||||||||||||||||||  ||| | |||||| | ||||||||||| |||||||  |||  ||||| ||||||||||||| | || |||    
T  15741943 actgcacgccgacacgtggccagacttgcgtcgccttaagacttcacatccaaaggagcacgccagtttgcgtgcactgtgccacacaggagcgcgtccc 15742042  T
Q  171 tcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctata 270  Q
    || |  ||||||||||||||||||||||||||| |||| |||||||||| |||||||||||| ||||||||||||||||||           ||||||||    
T  15742043 tcgtacaaggatcaccctacacgtgtcttgctc-gtccttaatcacacgccgcataacccggagacggttatggccaacacg----------cgcctata 15742131  T
Q  271 taagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgc 370  Q
    |||||||||| ||||||||  ||||||| ||||||| |||||||||| |||||||||||| | || |||| |||||||||||||||||||||  ||||||    
T  15742132 taagggtgaatttgcttcagtctcaaggtacacatcacttttcacaacacttcttacacactttttctcagttccattactgacttgagcgtaagagtgc 15742231  T
Q  371 taacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    ||||||||| ||| |||||||||| |||||||||||||||||||| ||||||||| ||| || ||||||||||||    
T  15742232 taacgtgccagcaggcacctttcgctccaccacgaagactcatcgtcgccgtgtcagaaaccgttaccgtcacac 15742306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 264 - 409
Target Start/End: Original strand, 15514533 - 15514678
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||||| ||||  ||| |||||||||||||||||||||     
T  15514533 gcctatataagggtgaacttgcttcaccctcaaggtacacatcactttccacaacacttcttacacactctttttcagttccattactgacttgagcgtt 15514632  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagac 409  Q
    ||||||||||||||||| || ||||| ||||||||||| |||||||    
T  15514633 ggagtgctaacgtgcctacaggcacccttcgttccaccgcgaagac 15514678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 100 - 383
Target Start/End: Original strand, 16012290 - 16012562
Alignment:
Q  100 caccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtctt 199  Q
    |||||| | |||||| |||| | || |||||| ||||| |||| ||||||||||| ||||||| | ||| |||   |||||||||||||||||||||  |    
T  16012290 caccgccttaagacttcgcacctaagggaacatgccaacttgtgtgcaccgtgccgcacaggagcgcgctctcgcataaggatcaccctacacgtgttct 16012389  T
Q  200 gctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggtgaacttgcttcaccctcaaggg 299  Q
    |||||||| ||||||||||| |||||||| |||  ||| ||||  ||||| |           ||||||||||||||||||||||||||||| |||||      
T  16012390 gctccgtcactaatcacacgccgcataactcggatacgattattaccaacgcg----------cgcctatataagggtgaacttgcttcacc-tcaagat 16012478  T
Q  300 acacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgca 383  Q
    ||| ||| ||| ||||||  ||||||||||| |||  |||| |||||||||||||||||||||||||||| |||||||||||||    
T  16012479 acatatcacttctcacaatgcttcttacacactctatctcagttccattactgacttgagcgtcggagtgttaacgtgcctgca 16012562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 263 - 417
Target Start/End: Complemental strand, 5518660 - 5518506
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||||||||||||||||||||| || |||| |||| ||||| |||||||||||| |||  |||| ||| |||||||||||||||||    
T  5518660 cgcctatataagggtgaacttgcttcaccctcaaggtacgcatcactttccacaacacttcttacacattctctctcagttcaattactgacttgagcgt 5518561  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
     | |||||||||||| |||||  ||||||||||||||   |||||||| ||||||    
T  5518560 tgaagtgctaacgtgtctgcactcacctttcgttccattgcgaagacttatcgcc 5518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 263 - 415
Target Start/End: Complemental strand, 12683905 - 12683753
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||| |||||||||||||||||||||||| |||| |    || |||||||||| ||||  |||||| |||| |||| || ||||||| ||||||||||    
T  12683905 cgcctagataagggtgaacttgcttcacccttaaggtatgattcacttttcacaacactttctacacactctttctcagtttcattactaacttgagcgt 12683806  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcg 415  Q
     |||||||||||||||||||| ||||||||||||||||| | |||||||||||    
T  12683805 tggagtgctaacgtgcctgcaggcacctttcgttccaccgcaaagactcatcg 12683753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 263 - 422
Target Start/End: Complemental strand, 19643822 - 19643663
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||||||| ||||||||||||| |    || |||||||||| ||||  |||||| |||| |||| ||||||||||||||| |||||    
T  19643822 cgcctatataagggtgaacttgtttcaccctcaaggtatgattcacttttcacaagactttctacacactctttctcagttccattactgacttaagcgt 19643723  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||| || |||||| |||||  ||||||| ||||||| |||||||||||| |||||||||    
T  19643722 cggattggtaacgtacctgcgggcaccttccgttccatcacgaagactcaacgccgccgt 19643663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 263 - 417
Target Start/End: Complemental strand, 47253397 - 47253243
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||  | ||||||||||||||| |    || |||||||||| |||| ||||||| |||| |||| |||||||||||||||||||||    
T  47253397 cgcctatataagggtgacttagcttcaccctcaaggtatgattcacttttcacaacactttttacacactctttctcagttccattactgacttgagcgt 47253298  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
     ||||||||||| |||||||| |||||||| || ||||| ||||||||| |||||    
T  47253297 tggagtgctaacatgcctgcaagcaccttttgtcccaccccgaagactcgtcgcc 47253243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 266 - 397
Target Start/End: Original strand, 14601989 - 14602120
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    |||||||||| |||||||||||||||||||||| ||||| | |||||||||| |||||||||||| |||   ||| || |||||||||||||||||| ||    
T  14601989 ctatataaggatgaacttgcttcaccctcaaggtacacaacacttttcacaacacttcttacacactctctttcagtttcattactgacttgagcgttgg 14602088  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttc 397  Q
    | ||||||||||||||||  || |||||||||    
T  14602089 attgctaacgtgcctgcagacaactttcgttc 14602120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 265 - 400
Target Start/End: Original strand, 1638291 - 1638425
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||||||||||||||||||||| ||||| | ||||||  || |||||||| ||  |||  |||| ||||||||||||||||| |||||    
T  1638291 cctatataagggtgaacttgcttcaccctcaaggtacacaacacttttcttaacacttcttagactttctctctcagttccattactgacttgatcgtcg 1638390  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccac 400  Q
    ||||||||| ||| |||||  |||||||||||||||    
T  1638391 gagtgctaaagtg-ctgcaaacacctttcgttccac 1638425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 263 - 401
Target Start/End: Complemental strand, 17110817 - 17110680
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||| |||||||||||||||||||||||||||  |||||   |||||| ||| |||||| | ||  |  | |||||||||||||||||||||| |||    
T  17110817 cgcctatgtaagggtgaacttgcttcaccctcaagatacacaatacttttcgcaacacttctaagacttttct-ctcaattccattactgacttgatcgt 17110719  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||||||||||||||| |||| |||| ||||||||||||    
T  17110718 cggagtgctaacgtgcttgcaggcacatttcgttccacc 17110680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 263 - 401
Target Start/End: Complemental strand, 29157222 - 29157084
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||||||| ||||||| |||||| |    || |||| ||||| ||||  |||||| | || |||| |||||||||| ||||||||||    
T  29157222 cgcctatataagggtgaacttacttcaccatcaaggtatggttcactttacacaacacttactacacactttttctcagttccattactaacttgagcgt 29157123  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
     ||||||| |||||| |||||||||||||||||||||||    
T  29157122 tggagtgcaaacgtgtctgcatgcacctttcgttccacc 29157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 266 - 422
Target Start/End: Original strand, 13896453 - 13896609
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    |||||||||||||||||| ||| |||||||||| ||||||| |||| ||||| |||||||| |||||||   ||| |||| |||||| || ||||||  |    
T  13896453 ctatataagggtgaactttctttaccctcaaggtacacatcactttccacaacacttcttatacaatctctttcagttcccttactggctagagcgtttg 13896552  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||| |||||||| |||| ||||| ||||||||| | | ||| |||||| |||||||    
T  13896553 agtgataacgtgcttgcaggcacccttcgttccagcgcaaagtctcatcaccgccgt 13896609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 263 - 399
Target Start/End: Complemental strand, 25066264 - 25066128
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||| ||||||||||| |||||||| ||||| | |||||||||| || ||||| |   |||  || | ||||||||||||||||| |||    
T  25066264 cgcctatataagggtaaacttgcttcaacctcaaggtacacaacacttttcacaacacgtcttagattttctctcttagttccattactgacttgatcgt 25066165  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    | |||||||||||| | ||||||||||||| ||||||    
T  25066164 cagagtgctaacgtacttgcatgcaccttttgttcca 25066128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 400
Target Start/End: Complemental strand, 19564079 - 19563945
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatctta-ctcaattccattactgacttgagcgtc 363  Q
    ||||||||| |||||||||||||||||||||||| ||||| | ||||||||||  || || | ||  | ||| |||| || ||| |||||||||| ||||    
T  19564079 cctatataacggtgaacttgcttcaccctcaaggtacacaacacttttcacaaccctcctaagac--ttttatctcagtttcataactgacttgatcgtc 19563982  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccac 400  Q
    | |||||||||||||||||| ||||||||||| ||||    
T  19563981 gcagtgctaacgtgcctgcaggcacctttcgtcccac 19563945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 13171130 - 13171065
Alignment:
Q  332 tcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttc 397  Q
    |||| |||| |||||||||||||||||| || |||||||||||||||||||| |||||||||||||    
T  13171130 tcttgctcagttccattactgacttgagagttggagtgctaacgtgcctgcaagcacctttcgttc 13171065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 415
Target Start/End: Complemental strand, 19809821 - 19809670
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||| |||||||||  | | ||||||||||||| | |  || |||||||||| ||||  |||||| |||| || | || ||||||||||||||||||    
T  19809821 cgcctatgtaagggtgacttagtttcaccctcaaggtataattcacttttcacaacactttctacacactctttcttagtttcattactgacttgagcgt 19809722  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcg 415  Q
     ||||||||||| || ||||| | |||||||| || ||| |||||||||||||    
T  19809721 tggagtgctaacatgtctgcaggaacctttcg-tcaaccgcgaagactcatcg 19809670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 352 - 414
Target Start/End: Complemental strand, 3981981 - 3981919
Alignment:
Q  352 gacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||||||| || ||||||||||||||| ||||||||||||||||||||||  |||||||||||    
T  3981981 gacttgagtgttggagtgctaacgtgcatgcatgcacctttcgttccaccgtgaagactcatc 3981919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 332 - 444
Target Start/End: Original strand, 14003104 - 14003216
Alignment:
Q  332 tcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagc 431  Q
    |||| |||| ||||||||||||||||||||||  |||||||||||  || || | ||||||||||||||| | |||||||| |  |||| || ||||||     
T  14003104 tctttctcagttccattactgacttgagcgtcatagtgctaacgttgcttcaggaacctttcgttccaccgcaaagactcaacatcgccttgacggaaga 14003203  T
Q  432 cattaccgtcaca 444  Q
    | |||||||||||    
T  14003204 ccttaccgtcaca 14003216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 414
Target Start/End: Complemental strand, 10981930 - 10981835
Alignment:
Q  319 acttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||| ||||||| |||| |||  |||||||||||||||||| || ||||||| |||||  ||||| ||||||||||| ||||  ||||||||||||    
T  10981930 actttttacacactctttctcggttccattactgacttgagtgttggagtgccaacgttgctgcaggcacctttcgtcccactgcgaagactcatc 10981835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 399
Target Start/End: Complemental strand, 18463920 - 18463784
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||| |||| ||| ||||||||||||  ||||| | |||||||||| ||| |||||||  |||  || | ||||  |||||| ||||| ||    
T  18463920 cgcctatataaggatgaaattgtttcaccctcaagatacacaacacttttcacaacactccttacaccttctctctaagttcccatactgatttgagtgt 18463821  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
      |||||||||||||||| || | ||| |||||||||    
T  18463820 tagagtgctaacgtgccttcaggaacccttcgttcca 18463784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 349 - 411
Target Start/End: Original strand, 26894778 - 26894840
Alignment:
Q  349 actgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactc 411  Q
    ||||||||||||||| ||| || ||| ||| |||||||||||||||| |||||| ||||||||    
T  26894778 actgacttgagcgtcagagagccaacatgcatgcatgcacctttcgtcccaccatgaagactc 26894840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 178 - 251
Target Start/End: Original strand, 17746053 - 17746126
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacac 251  Q
    |||||||||||||||||||| | || | | ||||||||||||||||||||| | | ||| |||||| |||||||    
T  17746053 aggatcaccctacacgtgtcctccttcattcctaatcacacgtcgcataacgcagagacagttatgaccaacac 17746126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 382
Target Start/End: Complemental strand, 12415552 - 12415437
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    |||||||||||||||||| ||| |||||||| | ||||| | ||||| ||||  || || | ||  |||  |||| |||||||||| |||||| ||| ||    
T  12415552 ctatataagggtgaacttactttaccctcaaagtacacaacactttttacaactctcctaagact-tctctctcagttccattacttacttgatcgttgg 12415454  T
Q  366 agtgctaacgtgcctgc 382  Q
    |||||||||||||||||    
T  12415453 agtgctaacgtgcctgc 12415437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 23350600 - 23350647
Alignment:
Q  204 cgtccctaatcacacgtcgcataacccggggacggttatggccaacac 251  Q
    |||||||||||||||| | |||||||||| |||||||||| |||||||    
T  23350600 cgtccctaatcacacgccacataacccggagacggttatgaccaacac 23350647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 393
Target Start/End: Original strand, 50151858 - 50151903
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttc 393  Q
    ||||||| ||| |||||||||||| |||||||| ||||||||||||    
T  50151858 tactgacatgatcgtcggagtgctgacgtgcctacatgcacctttc 50151903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 348 - 395
Target Start/End: Complemental strand, 1723997 - 1723949
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacg-tgcctgcatgcacctttcgt 395  Q
    ||||||||||||| | |||||||||||| || |||||||||||||||||    
T  1723997 tactgacttgagcattggagtgctaacgttgtctgcatgcacctttcgt 1723949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 143; Significance: 6e-75; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 95 - 444
Target Start/End: Original strand, 13291936 - 13292275
Alignment:
Q  95 acttgcaccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgt 194  Q
    ||||||||||| | ||| ||||||||| || | | |||||||  |||  || |||||||||||||||| | |||| ||  | ||||||||||||||||||    
T  13291936 acttgcaccgcctcaaggctccgcatctaaggaagcacgccagcttgcgtgaaccgtgccacacaggagcgcgccttcgcgcaaggatcaccctacacgt 13292035  T
Q  195 gtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggtgaacttgcttcaccctc 294  Q
    ||| |||||||||||||| |||||| |||||||||||| |||||||||||||||| |           ||||||||||| ||||||||||||||||||||    
T  13292036 gtcatgctccgtccctaaccacacgccgcataacccggagacggttatggccaacgcg----------cgcctatataatggtgaacttgcttcaccctc 13292125  T
Q  295 aagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcg 394  Q
    |||| ||||||| |||||||||| |||||||||||| ||||  ||| || ||||||||||||||||||  |||||||||||| ||||||  ||||||||     
T  13292126 aaggtacacatcacttttcacaacacttcttacacactctttttcagtttcattactgacttgagcgttagagtgctaacgtacctgcagacacctttcc 13292225  T
Q  395 ttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcaca 444  Q
    ||||||||||||||||||||||||||||| ||||| |  |||||||||||    
T  13292226 ttccaccacgaagactcatcgccgccgtgccggaaactgttaccgtcaca 13292275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 81 - 445
Target Start/End: Original strand, 16986891 - 16987245
Alignment:
Q  81 tgacacgtggccagacttgcaccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccctcatgtaagg 180  Q
    |||||||||| || ||||||||||| | ||| |||||| ||  ||||| |||||||| | | ||||||||||||||| ||||    ||||||    ||||    
T  16986891 tgacacgtggtcaaacttgcaccgccttaaggctccgcgtctgaaggagcacgccaactcgcatgcaccgtgccacataggagtgtgccctcgcacaagg 16986990  T
Q  181 atcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggtgaa 280  Q
    |||||||| |||||||| |||||| |||||||||||||  ||||||| |||| |||||||||||||||| |           ||||||||||||||||||    
T  16986991 atcaccctgcacgtgtcctgctccatccctaatcacacaccgcataatccggagacggttatggccaacgcg----------cgcctatataagggtgaa 16987080  T
Q  281 cttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcct 380  Q
    ||||||||||| | |||||||||||| |||||||||| |||||||||||| |||| |||||||||||||||| |||||| ||| |||||||||||||||     
T  16987081 cttgcttcacctttaagggacacatcacttttcacaacacttcttacacactctttctcaattccattactggcttgagtgtcagagtgctaacgtgccc 16987180  T
Q  381 gcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    ||||||||||||||||||||| ||||||||||| ||||||||  | |||||| ||| ||||||||    
T  16987181 gcatgcacctttcgttccaccgcgaagactcattgccgccgtaccagaagccgttagcgtcacac 16987245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 178 - 445
Target Start/End: Original strand, 9135257 - 9135514
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggt 277  Q
    ||||||||| |||| ||||| | |||||||||||||||||||   |||||||||| |||||||||| |||| || | |          ||||||||||||    
T  9135257 aggatcaccttacatgtgtcctcctccgtccctaatcacacgctacataacccggagacggttatgaccaatacgtgt----------ctatataagggt 9135346  T
Q  278 gaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtg 377  Q
    ||| ||||||||||||||||| |    || |||||||||| | || ||||||| |||| ||||||||||||||||||||||||||  |||||||||||||    
T  9135347 gaatttgcttcaccctcaaggtatgattcacttttcacaacagtttttacacactctttctcaattccattactgacttgagcgttagagtgctaacgtg 9135446  T
Q  378 cctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||  |||||||||||||||||||  ||||||| | | |||||||   |||| || ||||||||||||    
T  9135447 cctatatgcacctttcgttccaccgtgaagacttaacaccgccgtactggaaaccgttaccgtcacac 9135514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 5925446 - 5925584
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||| ||||||||||||||||||||||||||||| ||||| | |||||||| | |||||||| ||  |||  |||| ||||||||||||||||| |||    
T  5925446 cgcctacataagggtgaacttgcttcaccctcaaggaacacaacacttttcacgacacttcttagactttctctctcagttccattactgacttgatcgt 5925545  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
     ||||||||||||||||||||  ||||||||||||||||    
T  5925546 tggagtgctaacgtgcctgcagacacctttcgttccacc 5925584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 264 - 406
Target Start/End: Complemental strand, 34854362 - 34854220
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||||||||||||| ||||||||||  | ||||||| |||||||||| | |||||||||| |||| |||| || ||||||| |||||||||||    
T  34854362 gcctatataagggtgaacttgtttcaccctcagagtacacatcacttttcacaacatttcttacacactctttctcagtttcattactaacttgagcgtc 34854263  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaa 406  Q
     ||||||||||||| |||||  |||| ||||||||||||||||    
T  34854262 agagtgctaacgtgtctgcaaacaccgttcgttccaccacgaa 34854220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 263 - 415
Target Start/End: Complemental strand, 12644906 - 12644753
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaa-acttcttacacaatcttactcaattccattactgacttgagcg 361  Q
    ||||| || ||||||||||||||||||||||||| | |||  || |||||||| || ||||   ||||| | || |||| ||||||||||||| ||||||    
T  12644906 cgcctctacaagggtgaacttgcttcaccctcaacgtacaattcacttttcaccaacactttccacacactttttctcagttccattactgacctgagcg 12644807  T
Q  362 tcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcg 415  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  12644806 tcggagtgctaacttgcctgcatgcacctttcgttccaccgtgaagactcatcg 12644753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 332 - 444
Target Start/End: Original strand, 9867979 - 9868091
Alignment:
Q  332 tcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagc 431  Q
    |||| |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||||| ||||||||||   ||||||    
T  9867979 tcttcctcagttccattactgacttgagcgtcagagtgctaacgttcctgcatgcacctttcgtcccaccgcgaagactcgtcgccgccgttctggaagc 9868078  T
Q  432 cattaccgtcaca 444  Q
    | |||||||||||    
T  9868079 cgttaccgtcaca 9868091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 266 - 401
Target Start/End: Complemental strand, 18774098 - 18773963
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    ||||||||||||||| ||| ||||||||||||| ||||| | |||||||| | |||||||  ||  |||  |||| |||||||||||| |||| |||||     
T  18774098 ctatataagggtgaatttgtttcaccctcaaggtacacaacacttttcactacacttctttgactttctctctcagttccattactgatttgatcgtcga 18773999  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    ||||||||||||||||||||||||||||||||||||    
T  18773998 agtgctaacgtgcctgcatgcacctttcgttccacc 18773963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 269 - 401
Target Start/End: Complemental strand, 7486659 - 7486527
Alignment:
Q  269 tataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagt 368  Q
    ||||||||||||||| ||||||| | ||||||    || |||||||||| || |  ||||||||||| |||| |||||||||||| |||||||| |||||    
T  7486659 tataagggtgaactttcttcacctttaagggatgattcacttttcacaacaccttctacacaatctttctcagttccattactgaattgagcgttggagt 7486560  T
Q  369 gctaacgtgcctgcatgcacctttcgttccacc 401  Q
    ||||||||||||||||||||||||| |||||||    
T  7486559 gctaacgtgcctgcatgcacctttcattccacc 7486527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 272 - 381
Target Start/End: Original strand, 5928991 - 5929100
Alignment:
Q  272 aagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgct 371  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||| |||||||||||  |||   ||| |||||||||||||||||| || ||||||||    
T  5928991 aagggtgaatttgcttcacccccaagggacacatcacttttcacaacacttcttacactctctctttcagttccattactgacttgagtgttggagtgct 5929090  T
Q  372 aacgtgcctg 381  Q
    || |||||||    
T  5929091 aatgtgcctg 5929100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 264 - 402
Target Start/End: Complemental strand, 1979181 - 1979043
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    |||||||||| |||||||||||||||| | |||   ||||| | || ||||||| |||||||| ||  |||  |||| ||||||||||||||||||||||    
T  1979181 gcctatataaaggtgaacttgcttcactcccaatatacacaacactcttcacaacacttcttagactttctctctcagttccattactgacttgagcgtc 1979082  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccacca 402  Q
     |||| ||||||||| |||| |||||||||||| |||||    
T  1979081 agagtactaacgtgcttgcaggcacctttcgtttcacca 1979043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 263 - 398
Target Start/End: Original strand, 4781471 - 4781605
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatctta-ctcaattccattactgacttgagcg 361  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||| |||||  || || | ||  | ||| |||||||||||||||||||||| ||    
T  4781471 cgcctatataagggtgaacttgcttcaccctcaaggtacacaacactttacacaactctcctaagac--ttttatctcaattccattactgacttgatcg 4781568  T
Q  362 tcggagtgctaacgtgcctgcatgcacctttcgttcc 398  Q
    || ||| ||||||||||| | | ||||||||||||||    
T  4781569 tcagagggctaacgtgccaggaggcacctttcgttcc 4781605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 263 - 398
Target Start/End: Original strand, 4813902 - 4814036
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatctta-ctcaattccattactgacttgagcg 361  Q
    |||||||||||||||||||||||||||||||||||| ||||| | |||| |||||  || || | ||  | ||| |||||||||||||||||||||| ||    
T  4813902 cgcctatataagggtgaacttgcttcaccctcaaggtacacaacactttacacaactctcctaagac--ttttatctcaattccattactgacttgatcg 4813999  T
Q  362 tcggagtgctaacgtgcctgcatgcacctttcgttcc 398  Q
    || ||| ||||||||||| | | ||||||||||||||    
T  4814000 tcagagggctaacgtgccaggaggcacctttcgttcc 4814036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 308 - 445
Target Start/End: Complemental strand, 39879462 - 39879325
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaag 407  Q
    ||||| |||| |||| ||||||| |||| |||| || ||||||||||||||||||   |||| ||||||| ||||| |||||||||||||||||||||||    
T  39879462 ctttttacaacactttttacacactctttctcagtttcattactgacttgagcgttaaagtgttaacgtgtctgcaggcacctttcgttccaccacgaag 39879363  T
Q  408 actcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    | |||||    |||| |||||| |||| ||||||||||    
T  39879362 attcatcattaccgtatcggaaaccatcaccgtcacac 39879325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 10287567 - 10287705
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||| |||||| | ||||||||||| |    || |||||||||| |||||||||||| | || ||||  ||||||||||||||||||||    
T  10287567 cgcctatataagggtaaacttgttacaccctcaaggtatctctcacttttcacaacacttcttacacactttttctcagatccattactgacttgagcgt 10287666  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
        ||||||||||||||||| | |||||| ||||||||    
T  10287667 taaggtgctaacgtgcctgcaggaacctttggttccacc 10287705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 343 - 414
Target Start/End: Complemental strand, 21161281 - 21161211
Alignment:
Q  343 tccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||||||||||||||||||| ||||||||||||||||||||  || ||||||||||||| ||||||||||||    
T  21161281 tccattactgacttgagcgttggagtgctaacgtgcctgcagaca-ctttcgttccaccgcgaagactcatc 21161211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 26762882 - 26763020
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||| |||||  |||||||||||||||||| |    || |||||||||| ||||  |||||| | ||  | | |||| ||||||||||||||||    
T  26762882 cgcctatatatgggtgtccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactatttatgagttcctttactgacttgagcgt 26762981  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
     |||||||||||||||||||| | |||||||| ||||||    
T  26762982 tggagtgctaacgtgcctgcaagaacctttcgctccacc 26763020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 399
Target Start/End: Complemental strand, 20034434 - 20034300
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||||||| |||||||| |||||||||| ||||| | |||||||| | |||||| | ||  | |  |||| |||||||||||||||||  |||    
T  20034434 gcctatataagggtgtacttgctttaccctcaaggtacacaacacttttcactacacttctaaaac-ttttctctcagttccattactgacttgattgtc 20034336  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    ||| | | |||||| ||||| |||||||||||||||    
T  20034335 ggaattcaaacgtgtctgcaggcacctttcgttcca 20034300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 263 - 414
Target Start/End: Complemental strand, 29373566 - 29373415
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||| |||||||  ||||||||||||||||| |    ||  ||||||||| | ||  |||||| |||| ||||||| ||  |||||||||||| |    
T  29373566 cgcctatatgagggtgacattgcttcaccctcaaggtatgattcaattttcacaacattttctacacactctttctcaattacacaactgacttgagcat 29373467  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
     ||||| ||||| ||||||||||||||||||||| |||| | || |||||||    
T  29373466 tggagtcctaacatgcctgcatgcacctttcgtttcaccgcaaaaactcatc 29373415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 263 - 416
Target Start/End: Complemental strand, 5863307 - 5863154
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||| ||||||||  ||||| ||||||||||| |    || ||||| |||| | ||  |||||| |||| |||| ||| |||||||||||||||||    
T  5863307 cgcctatacaagggtgacattgctccaccctcaaggtatgattcactttttacaacattttctacacactctttctcagttcgattactgacttgagcgt 5863208  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgc 416  Q
      |||||||||||||| |||| |||  |||||||| |||  |||||||||||||    
T  5863207 ttgagtgctaacgtgcttgcacgcaaatttcgttctaccgtgaagactcatcgc 5863154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 12265097 - 12265155
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaactt 322  Q
    |||||||||||||||||||||||| |||||||||| || |||| |||||||||| ||||    
T  12265097 gcctatataagggtgaacttgcttgaccctcaaggtacgcatcacttttcacaacactt 12265155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 319 - 416
Target Start/End: Original strand, 9573453 - 9573550
Alignment:
Q  319 acttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgc 416  Q
    |||||||||||| |||| |||| ||||  || ||||||| |||| |||||||||||||||||||| |||||  | |||||||| | ||||||| ||||    
T  9573453 acttcttacacactctttctcagttcccatattgacttgtgcgttggagtgctaacgtgcctgcaggcaccccttgttccaccgcaaagactcgtcgc 9573550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 350 - 422
Target Start/End: Complemental strand, 25173933 - 25173861
Alignment:
Q  350 ctgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||| |||||||| | ||||||||||| |||||||||||||||||| ||||  | ||||||||||||| ||||    
T  25173933 ctgatttgagcgttgaagtgctaacgtacctgcatgcacctttcgtcccactccaaagactcatcgccaccgt 25173861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 342 - 401
Target Start/End: Complemental strand, 17150002 - 17149944
Alignment:
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||||||||  |||||| ||||||||||||||||||| |||| ||||||||||| |||||    
T  17150002 ttccattacatacttgatcgtcggagtgctaacgtgcatgca-gcacctttcgtgccacc 17149944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 401
Target Start/End: Original strand, 12265155 - 12265201
Alignment:
Q  355 ttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||||| || ||||| |||||||||||||||||||||| ||||||||    
T  12265155 ttgagcatcagagtgttaacgtgcctgcatgcaccttttgttccacc 12265201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 393
Target Start/End: Complemental strand, 16363466 - 16363424
Alignment:
Q  351 tgacttgagcgtcggagtgctaacgtgcctgcatgcacctttc 393  Q
    |||||||||||| ||||||||||| ||||| ||||||||||||    
T  16363466 tgacttgagcgttggagtgctaacatgcctacatgcacctttc 16363424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 381
Target Start/End: Complemental strand, 27803403 - 27803370
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctg 381  Q
    ||||||||||||||| ||||||||||||||||||    
T  27803403 tactgacttgagcgttggagtgctaacgtgcctg 27803370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 43172007 - 43172040
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaa 296  Q
    |||||||||||||||||| |||||||||||||||    
T  43172007 cgcctatataagggtgaagttgcttcaccctcaa 43172040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 342 - 422
Target Start/End: Complemental strand, 13159414 - 13159334
Alignment:
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    ||||| |||||| |||||| | |||||| ||||||||||||| |||| ||| || || || | |||||||| |||||||||    
T  13159414 ttccaatactgatttgagcattggagtgttaacgtgcctgcaggcacattttgtcccgccgcaaagactcaacgccgccgt 13159334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 2e-62; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 177 - 445
Target Start/End: Complemental strand, 22865957 - 22865699
Alignment:
Q  177 aaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataaggg 276  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||  ||||||||||||||| |           ||||||||||||||    
T  22865957 aaggatcaccctacacgtgtcatgctccgtccctaatcacaagtcgcataatccggaaacggttatggccaacgca----------cgcctatataaggg 22865868  T
Q  277 tgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgt 376  Q
    |||||||||||||||||||||| ||||||| |||||||||| | |||||||||| | || |||| |||||||||| |||||||||||  |||||||||||    
T  22865867 tgaacttgcttcaccctcaaggtacacatcacttttcacaacatttcttacacactttttctcagttccattactaacttgagcgtcaaagtgctaacgt 22865768  T
Q  377 gcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
     |||||||||||||||||||||||  |||||||   ||||| ||||| || ||||| ||||||||||||    
T  22865767 acctgcatgcacctttcgttccactgcgaagacatgtcgccaccgtgccgaaagccgttaccgtcacac 22865699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 146 - 445
Target Start/End: Complemental strand, 25537632 - 25537343
Alignment:
Q  146 caccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggc 245  Q
    |||| ||||||| |||| |||||||||  | |||||| |||||| |||| || || | |||||||||||||||||| ||||||| || ||||||| ||||    
T  25537632 caccatgccacataggagctcgccctcgcgcaaggattaccctatacgtttcctgattcgtccctaatcacacgtcacataacctggagacggttttggc 25537533  T
Q  246 caacacttcttacacgtcgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattcc 345  Q
    |||  |           ||||||||||||||||||||| |||||||||||||| | ||||| |||||||||| ||||| ||||||||||| |||| ||||    
T  25537532 caaggcg----------cgcctatataagggtgaactttcttcaccctcaaggtatacatcacttttcacaacacttcatacacaatctttctcagttcc 25537443  T
Q  346 attactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||||   ||||||||| ||||||||||||||| |||| ||||||||||||||||| ||||||||| ||||||||||| | ||| || ||||||||||||    
T  25537442 attacaatcttgagcgttggagtgctaacgtgcttgcaggcacctttcgttccaccgcgaagactcttcgccgccgtgccagaaaccgttaccgtcacac 25537343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 81 - 438
Target Start/End: Complemental strand, 24546634 - 24546292
Alignment:
Q  81 tgacacgtggccagacttgcaccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccctcatgtaagg 180  Q
    |||||||||||| |||||||| | | | | |||||||||   || ||| |||||||| |||  ||||||||||||||||||| | | ||  |  | ||||    
T  24546634 tgacacgtggccggacttgcatcacctcaggactccgcacttaagggagcacgccaacttgcgtgcaccgtgccacacaggagcgcacctccgcgcaagg 24546535  T
Q  181 atcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggtgaa 280  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||| |           ||||||||||||||||||    
T  24546534 atcaccctacacgtgtcttgctccgtccctaatcacacgccgcataacccggagacggttatggctaacgcg----------cgcctatataagggtgaa 24546445  T
Q  281 ctt-gcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcc 379  Q
    ||| |||||||| |||||| ||||||| |||| ||||| |||||||| ||| |||    |||||||||||||||||| ||||| ||||| ||||||||||    
T  24546444 ctttgcttcaccttcaaggtacacatcacttt-cacaacacttcttatacactct----caattccattactgactttagcgt-ggagttctaacgtgcc 24546351  T
Q  380 tgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattacc 438  Q
    ||||  ||||||||||||||||| |||||||||  |  |||||| || |||||||||||    
T  24546350 tgcagacacctttcgttccaccatgaagactcactgttgccgtgccgaaagccattacc 24546292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 177 - 423
Target Start/End: Original strand, 25828883 - 25829119
Alignment:
Q  177 aaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataaggg 276  Q
    ||||||| ||||||||||||| |  |||| ||||||||||||| |||||||||||| ||||| ||||||||||||   ||          |||||| |||    
T  25828883 aaggatcgccctacacgtgtcctattccgcccctaatcacacgccgcataacccggagacggctatggccaacacgcttt----------tatatacggg 25828972  T
Q  277 tgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgt 376  Q
    |||||||| ||||||||||||||||||||| |||||||||| |||||||||||| | || ||||||||||||| ||||| ||||||| || |||||||||    
T  25828973 tgaacttgtttcaccctcaagggacacatcacttttcacaatacttcttacacactttttctcaattccattattgactagagcgtcagattgctaacgt 25829072  T
Q  377 gcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtg 423  Q
    ||||| || ||| ||| |||| ||| |||||||| |||||| |||||    
T  25829073 gcctgaatacacattttgttcaaccgcgaagacttatcgccaccgtg 25829119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 263 - 399
Target Start/End: Complemental strand, 24647408 - 24647272
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||||||||||||||||| |||| | ||||| |||||||||| |||||||||||| ||||  ||| |||||||||||| ||||||||    
T  24647408 cgcctatataagggtgaacttgcttcacccttaaggtatacatcacttttcacaacacttcttacacactctttttcagttccattactgaattgagcgt 24647309  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
     |||||| ||| |||  || ||||||| |||||||||    
T  24647308 tggagtgttaaagtgtatgtatgcacccttcgttcca 24647272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 337 - 445
Target Start/End: Original strand, 31202473 - 31202581
Alignment:
Q  337 ctcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccatta 436  Q
    |||| ||||| ||||||||||||||||||| ||||||||| |||| | |||| ||  |||||||| ||||||||||||||||||||||| |||| | |||    
T  31202473 ctcagttccaatactgacttgagcgtcggaatgctaacgttcctgtaggcactttctgttccaccgcgaagactcatcgccgccgtgtcagaagtcgtta 31202572  T
Q  437 ccgtcacac 445  Q
    |||||||||    
T  31202573 ccgtcacac 31202581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 263 - 377
Target Start/End: Original strand, 26994577 - 26994691
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||| |||||||||||| ||||| |    || |||||||||| || |  || ||| |||| ||||||||||||||||||||||||||    
T  26994577 cgcctatataagggtgaccttgcttcacccccaaggtatgattcacttttcacaacaccttctaaacactctttctcaattccattactgacttgagcgt 26994676  T
Q  363 cggagtgctaacgtg 377  Q
    |||||||||||||||    
T  26994677 cggagtgctaacgtg 26994691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 26348062 - 26348188
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||||||||||||||||||||| ||||| |            ||||||||||| ||||   | | |||||||| ||||||||||||    
T  26348062 cgcctatataagggtgaacttgcttcaccctcaaggtacacaac------------acttcttacactatctcttttagttccattaatgacttgagcgt 26348149  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
     ||||||||||||||||||||  ||||||||||||||||    
T  26348150 tggagtgctaacgtgcctgcagacacctttcgttccacc 26348188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 267 - 414
Target Start/End: Complemental strand, 22903209 - 22903062
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    |||||||||||||  ||| ||||||||||||| |    || |||||||||| ||||  |||||| |||| |||| ||||||||||||||||||||| | |    
T  22903209 tatataagggtgatattgtttcaccctcaaggtatgattcacttttcacaacactttctacacactctttctcagttccattactgacttgagcgttgaa 22903110  T
Q  367 gtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||||||| ||||| |    ||||||||||||||| |||| |||||||    
T  22903109 gtgctaacatgcctacgaaaacctttcgttccaccgcgaaaactcatc 22903062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 422
Target Start/End: Complemental strand, 8938976 - 8938871
Alignment:
Q  319 acttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccac--cacgaagactcatcgc 416  Q
    |||| ||||||| |||| |||| ||||| |||||||| |||| | |||||| ||||||||||||||||||||||||||| ||  ||| ||||||||||||    
T  8938976 actttttacacactctttctcagttccaatactgactagagcattggagtgttaacgtgcctgcatgcacctttcgttctaccgcacaaagactcatcgc 8938877  T
Q  417 cgccgt 422  Q
    | ||||    
T  8938876 caccgt 8938871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 401
Target Start/End: Complemental strand, 18799899 - 18799762
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||||||||||||| | |||||| ||||| | ||||||||||  || ||   ||  |  | |||| ||||||||||||||||| |||    
T  18799899 cgcctatataagggtgaacttgcttcatcatcaaggtacacaacacttttcacaactctcctagaacttttct-ctcagttccattactgacttgatcgt 18799801  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    ||||||||||||||| ||||| | | |||||||||||||    
T  18799800 cggagtgctaacgtgactgcaggaatctttcgttccacc 18799762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 263 - 403
Target Start/End: Complemental strand, 18804037 - 18803898
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||| ||||||| ||||||||||||||||| ||||| |  |||||||||  ||  | | | | | |  ||||||||||||||||| || | |||    
T  18804037 cgcctatatacgggtgaaattgcttcaccctcaaggtacacaacaattttcacaactctcatgaga-attttctctcaattccattactgaattaatcgt 18803939  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccac 403  Q
     |||||||||||||| || || |||||||||||||||||||    
T  18803938 tggagtgctaacgtgtcttcaggcacctttcgttccaccac 18803898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 178 - 298
Target Start/End: Original strand, 31202271 - 31202381
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgt-cgcctatataaggg 276  Q
    ||||| |||||||||||||||| ||||  ||||||||||||| |||||||||  | |||||||||| |||           |||| ||||||||||||||    
T  31202271 aggattaccctacacgtgtcttcctccacccctaatcacacgccgcataacctagagacggttatgacca-----------acgtgcgcctatataaggg 31202359  T
Q  277 tgaacttgcttcaccctcaagg 298  Q
    ||||||||||||||||||||||    
T  31202360 tgaacttgcttcaccctcaagg 31202381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 327 - 417
Target Start/End: Complemental strand, 16621264 - 16621174
Alignment:
Q  327 cacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    |||| |||| |||| ||||| || || ||||||||| | |||| |||||||||| ||| ||||||||||||||||  ||||||||||||||    
T  16621264 cacactctttctcagttccaatattggcttgagcgttgaagtgttaacgtgcctacatacacctttcgttccaccgtgaagactcatcgcc 16621174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 345 - 399
Target Start/End: Complemental strand, 26163673 - 26163619
Alignment:
Q  345 cattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    |||| ||||||||||||| |||||||||| |||| ||||||||||||||||||||    
T  26163673 catttctgacttgagcgttggagtgctaatgtgcatgcatgcacctttcgttcca 26163619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 408
Target Start/End: Complemental strand, 25333851 - 25333710
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    |||||||| ||||||||||||||| ||||| | |    || ||||| |||| ||||  |||||| |||  || | || ||||||||||||||||||||||    
T  25333851 tatataagagtgaacttgcttcactctcaaagtatgattcacttttaacaacactttctacacactctctcttagttacattactgacttgagcgtcgga 25333752  T
Q  367 gtgctaacgtgcctgcatgcacctttcgttccaccacgaaga 408  Q
    || ||||  |||||||| | |||||||| |||||| ||||||    
T  25333751 gtactaatatgcctgcaagtacctttcgctccaccgcgaaga 25333710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 266 - 399
Target Start/End: Original strand, 32418460 - 32418593
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    ||||| |||||||||||||||||| |||||||| |    || || ||||||| |||   |||||| |||| |||  |||||| | ||||||||||||| |    
T  32418460 ctatacaagggtgaacttgcttcatcctcaaggtatgattcactcttcacaacactctctacacactctttctctgttccatcagtgacttgagcgtcag 32418559  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    |||| | ||||||||||| || ||||||||||||    
T  32418560 agtgttgacgtgcctgcaggctcctttcgttcca 32418593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 7449827 - 7449747
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcgga 428  Q
    ||||||||| |||||  ||||||||||||| ||| ||||||||||||| ||||| | ||||||||||| | |||| |||||    
T  7449827 tactgacttaagcgttagagtgctaacgtgtctgaatgcacctttcgtcccaccgcaaagactcatcgtcaccgtatcgga 7449747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 263 - 315
Target Start/End: Complemental strand, 21213363 - 21213311
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcac 315  Q
    |||||||||||||||||||||||||||||||||||  ||||| | ||||||||    
T  21213363 cgcctatataagggtgaacttgcttcaccctcaagctacacaacacttttcac 21213311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 365 - 400
Target Start/End: Complemental strand, 30827088 - 30827053
Alignment:
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccac 400  Q
    ||||||||||||||||||||||||||||||||||||    
T  30827088 gagtgctaacgtgcctgcatgcacctttcgttccac 30827053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 422
Target Start/End: Complemental strand, 4477233 - 4477159
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    ||||||||||||||| |||||  ||||||||||||  ||||| ||||| ||||| | ||||||||||||| ||||    
T  4477233 tactgacttgagcgttggagtattaacgtgcctgcgggcacccttcgtcccaccgcaaagactcatcgccaccgt 4477159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 413
Target Start/End: Complemental strand, 20025403 - 20025253
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||| ||||||||||| || ||||||||||||||| |    || |||| ||||| ||||  |||||| |||| |||| || |||| |||||   |||||    
T  20025403 cgcctgtataagggtgacctagcttcaccctcaaggaatgattcactttacacaacactttctacacactctttctcagtttcattcctgacagtagcgt 20025304  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcat 413  Q
     |||||| |||||||  ||||  |||||||||| ||||| |||||||||||    
T  20025303 tggagtgttaacgtgtgtgcagacacctttcgtcccaccgcgaagactcat 20025253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 417
Target Start/End: Original strand, 27083292 - 27083362
Alignment:
Q  347 ttactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    ||||||||||||| || |||||||||||||| |||||  ||| |||||||| ||| ||||||||| |||||    
T  27083292 ttactgacttgagtgttggagtgctaacgtgtctgcagacacatttcgttctaccgcgaagactcttcgcc 27083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 417
Target Start/End: Original strand, 227739 - 227803
Alignment:
Q  353 acttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    ||||||||||  |||||||||||||||||||  |||  ||| | |||||||||||||||||||||    
T  227739 acttgagcgtttgagtgctaacgtgcctgcagacactcttcatcccaccacgaagactcatcgcc 227803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 342 - 422
Target Start/End: Complemental strand, 19846110 - 19846030
Alignment:
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    ||||| |||||||||||| ||  ||||||||| ||| ||||| ||||||||||||||| || | ||| |||||||| ||||    
T  19846110 ttccaatactgacttgagtgttagagtgctaatgtgtctgcaggcacctttcgttccatcatggagattcatcgccaccgt 19846030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 297
Target Start/End: Original strand, 25679219 - 25679251
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaag 297  Q
    |||||||||||||||||||||||||||||||||    
T  25679219 cctatataagggtgaacttgcttcaccctcaag 25679251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 178 - 243
Target Start/End: Complemental strand, 25333932 - 25333865
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataa--cccggggacggttatg 243  Q
    |||||||||||||||||||| | |||| |||||| ||||||| ||||| |  ||||| ||||||||||    
T  25333932 aggatcaccctacacgtgtcctcctccttccctagtcacacgccgcattacccccggagacggttatg 25333865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 2e-62; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 143 - 415
Target Start/End: Complemental strand, 12516416 - 12516153
Alignment:
Q  143 atgcaccgtgccacacaggacctcgccc-tcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggtta 241  Q
    |||||||||||| ||||| | ||||||| || || ||||||||||||||||||||| ||||||||||||||||||| |||||||||  ||| ||||||||    
T  12516416 atgcaccgtgcctcacagaagctcgcccctcgtgcaaggatcaccctacacgtgtcctgctccgtccctaatcacatgtcgcataaggcggagacggtta 12516317  T
Q  242 tggccaacacttcttacacgtcgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaa 341  Q
    |||||||  |     ||||     |||||||| |||||||||||||||||||||||| ||| ||| |||||||||| |||| |||||||||||| ||||     
T  12516316 tggccaaggc-----acac-----ctatataaaggtgaacttgcttcaccctcaaggtacatatcacttttcacaacacttattacacaatctttctcag 12516227  T
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcg 415  Q
    |||||||||| ||||||||||||||||||||||||| ||||| |||||||||||| ||||| ||||||| ||||    
T  12516226 ttccattactaacttgagcgtcggagtgctaacgtgtctgcaggcacctttcgtttcaccatgaagactgatcg 12516153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 177 - 417
Target Start/End: Original strand, 14859994 - 14860224
Alignment:
Q  177 aaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataaggg 276  Q
    |||||||||| |||||||||| ||||| ||||||||||| ||| | ||||||| || |||||||||| |         |||  || ||||||||||||||    
T  14859994 aaggatcaccatacacgtgtcctgctctgtccctaatcatacgcctcataacctggagacggttatgac---------ttaagcg-cgcctatataaggg 14860083  T
Q  277 tgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgt 376  Q
    |||||||||||||||||||||| ||||||| |||||||||| |||||||||| | | || |||| |||||||||||| |||||  || ||||||||| ||    
T  14860084 tgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacaaactgtttctcagttccattactgagttgagaatcagagtgctaatgt 14860183  T
Q  377 gcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    ||||||| |||||||||||||||||||||||| ||||||||    
T  14860184 gcctgcaagcacctttcgttccaccacgaagattcatcgcc 14860224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 267 - 445
Target Start/End: Original strand, 12731536 - 12731714
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||| ||| |||| |||| |||||||| |||| |||||||||||    
T  12731536 tatataagggtgaacttgcttcaccctcaaggttcacatcacttttcacaacacttcttatacactctttctcagttccattaatgacgtgagcgtcgga 12731635  T
Q  367 gtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    || ||||| ||  || | ||||| ||||||||||| ||||||||| ||||||||||| |||||||| ||||||||||||    
T  12731636 gtactaacatggttgtaggcaccattcgttccacctcgaagactcttcgccgccgtgccggaagcctttaccgtcacac 12731714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 178 - 445
Target Start/End: Complemental strand, 25496133 - 25495877
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgt-cgcctatataaggg 276  Q
    ||||||| || ||||||||| | | |||| |||||||||||| |||||||||||| ||||||||||  ||           |||| ||||||||||||||    
T  25496133 aggatcatccaacacgtgtcctacaccgttcctaatcacacgccgcataacccggagacggttatgatca-----------acgtgcgcctatataaggg 25496045  T
Q  277 tgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgt 376  Q
    ||||||||||||||| | |||| ||||||| |||||  |||  ||||||||||| |||| |||| ||  |||||||||||||| ||| ||||||||||||    
T  25496044 tgaacttgcttcacctttaaggtacacatcacttttttcaactcttcttacacactctttctcagtttgattactgacttgag-gtcagagtgctaacgt 25495946  T
Q  377 gcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    | ||||| ||||||| ||  ||||| |||||| ||||| ||| |||| |||||||| ||||||||||||    
T  25495945 gtctgcaggcaccttacgccccaccgcgaagaatcatcaccgtcgtgccggaagccgttaccgtcacac 25495877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 178 - 412
Target Start/End: Original strand, 431212 - 431436
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggt 277  Q
    ||||||||| |||||||||| | |||| ||||||||||||||  ||||||||||  ||| ||||||  ||||||           |||||||||||||||    
T  431212 aggatcaccttacacgtgtcctcctccatccctaatcacacgctgcataacccgcagacagttatgagcaacacg----------cgcctatataagggt 431301  T
Q  278 gaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtg 377  Q
    | || ||||||||||||||||||||  || |||||||||  ||||   || || |||| |||| |||||||| |||||||||||||| ||||||||||||    
T  431302 ggacatgcttcaccctcaagggacaattcacttttcacagcactttccacgcactctttctcagttccattattgacttgagcgtcgaagtgctaacgtg 431401  T
Q  378 cctgcatgcacctttcgttccaccacgaagactca 412  Q
     ||| | ||||||||| ||||||| ||||||||||    
T  431402 tctgtaggcacctttctttccaccgcgaagactca 431436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 264 - 430
Target Start/End: Complemental strand, 12108538 - 12108372
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaac-ttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||||||||||||||||||||| |||    | ||||| || ||| || || |||| |||| |||| |||||||||| ||||||||||    
T  12108538 gcctatataagggtgaacttgcttcaccctcaaggtacattctcattttc-cagaacattatttcacattctttctcagttccattactaacttgagcgt 12108440  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaag 430  Q
    ||||||| |||| ||| |||||||||||||| ||||||||||| ||||||||| || |||| ||||||    
T  12108439 cggagtggtaacatgcatgcatgcacctttcattccaccacgaggactcatcgtcgtcgtgccggaag 12108372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 265 - 446
Target Start/End: Complemental strand, 1770944 - 1770762
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacac-atcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    |||||||||||| |||||||||||| ||||||||  ||  ||| |||||||||| ||||  |||||| |||| |||| |||||||||| |||||||||||    
T  1770944 cctatataagggcgaacttgcttcatcctcaaggcgcatgatcacttttcacaacactttctacacactcttcctcagttccattactaacttgagcgtc 1770845  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacact 446  Q
    ||||| ||||| ||| ||||  |||||||| ||||||| | ||||||||  ||| |||| ||  || |||| |||||||||||    
T  1770844 ggagtactaacatgcttgcagacacctttccttccaccgcaaagactcaatgcctccgtttcaaaaaccatcaccgtcacact 1770762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 337 - 439
Target Start/End: Complemental strand, 21649459 - 21649357
Alignment:
Q  337 ctcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccatta 436  Q
    |||| ||||||||||||||||| ||| || |||||||||||| |||| ||||||||||||||||| ||||||||||||||| |||  ||||||||| |||    
T  21649459 ctcagttccattactgacttgatcgttggggtgctaacgtgcttgcaggcacctttcgttccaccgcgaagactcatcgccaccgcatcggaagccgtta 21649360  T
Q  437 ccg 439  Q
    |||    
T  21649359 ccg 21649357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 300 - 429
Target Start/End: Complemental strand, 12252071 - 12251942
Alignment:
Q  300 acacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    ||||||| |||||||||| | |||||||||| |||| |||| || | ||||||||||||| ||| |||||||||| ||||||||||||||||| || | |    
T  12252071 acacatcacttttcacaacaattcttacacactctttctcattttcgttactgacttgagtgtcagagtgctaacatgcctgcatgcaccttttgtccta 12251972  T
Q  400 ccacgaagactcatcgccgccgtgtcggaa 429  Q
       |||||||||||||||| ||||||||||    
T  12251971 ttgcgaagactcatcgccgtcgtgtcggaa 12251942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 75 - 248
Target Start/End: Complemental strand, 12257125 - 12256952
Alignment:
Q  75 gcacgctgacacgtggccagacttgcaccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccctcat 174  Q
    ||||| ||||||||| ||||||||| |||||   ||||||||||| ||||||||||||||||| ||| |||||  ||  |||||| || | |||| ||      
T  12257125 gcacgatgacacgtgaccagacttgtaccgccgtaagactccgcacccaaaggaacacgccaacttgcatgcattgtatcacacaagagcgcgccatcgc 12257026  T
Q  175 gtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaa 248  Q
    | |||| |||| ||||||||||  || | |||||||||||||||| |||||||| ||  |||||||||||||||    
T  12257025 gcaagggtcacactacacgtgttatgtttcgtccctaatcacacgccgcataactcgaagacggttatggccaa 12256952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 264 - 410
Target Start/End: Original strand, 9801056 - 9801201
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||||||||  ||||||||||||||||| |    || |||||||||| ||||  |||||| |||| |||  ||| |||||||||||||| ||     
T  9801056 gcctatataagggtgacattgcttcaccctcaaggtatgattcacttttcacaacactttctacacactctttctctgttctattactgacttgagtgtt 9801155  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagact 410  Q
    | ||||||||||||| |||| ||||||||||||||||  ||||||||    
T  9801156 g-agtgctaacgtgcttgcaggcacctttcgttccactgcgaagact 9801201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 380
Target Start/End: Complemental strand, 16704522 - 16704405
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||||||||||||||||||||| |    || |||||||||| ||||  |||||  |||| ||||| |||||||||||||| |||||    
T  16704522 cgcctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttctacactctctttctcaactccattactgacttcagcgt 16704423  T
Q  363 cggagtgctaacgtgcct 380  Q
     ||| ||| |||||||||    
T  16704422 tggaatgccaacgtgcct 16704405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 267 - 380
Target Start/End: Original strand, 17143724 - 17143837
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    |||||||||||||  ||| ||||||| ||||| |    || |||||||||| ||||  |||||| |||| |||| |||||||||||||||||||||||||    
T  17143724 tatataagggtgatgttgtttcacccccaaggtatgattcacttttcacaacactttctacacactctttctcagttccattactgacttgagcgtcgga 17143823  T
Q  367 gtgctaacgtgcct 380  Q
    ||||||||||||||    
T  17143824 gtgctaacgtgcct 17143837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 263 - 380
Target Start/End: Complemental strand, 30607048 - 30606931
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||  ||| |||||||||||||| | |  || |||||||||| ||||  ||| || |||| ||||||||||||||||||||||||||    
T  30607048 cgcctatataagggtggccttacttcaccctcaaggtataattcacttttcacaacactttctactcactctttctcaattccattactgacttgagcgt 30606949  T
Q  363 cggagtgctaacgtgcct 380  Q
     ||| ||||||| |||||    
T  30606948 tggaatgctaacatgcct 30606931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 270 - 422
Target Start/End: Original strand, 2311812 - 2311964
Alignment:
Q  270 ataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtg 369  Q
    ||||||||||  ||||||||||||||||| |    || | |||||||| ||||  |||||| |||| ||||| ||| || |||| |||||||| ||||||    
T  2311812 ataagggtgacattgcttcaccctcaaggtatgattcacctttcacaacactttctacacattctttctcaaatcccttgctgatttgagcgttggagtg 2311911  T
Q  370 ctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||||||  |||||  |||||||| ||||||||||||||||| ||||| ||||    
T  2311912 ctaacgtatctgcagacacctttcattccaccacgaagactcttcgccaccgt 2311964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 420
Target Start/End: Original strand, 20122750 - 20122908
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||||||| |||||||||||||| ||||| | |||| ||||||||||| |||||  |||  || | || |  ||||||||||| | |    
T  20122750 cgcctatataagggtgaactttcttcaccctcaaggtacacaacactttccacaaaacttcatacactttctatcttagtttccatactgacttgatcat 20122849  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccac-gaagactcatcgccgcc 420  Q
    || | || || |||||||||| ||||| ||||||| ||||| |||||| | ||||||||    
T  20122850 cgaaatgttagcgtgcctgcaggcacccttcgttctaccacagaagacacgtcgccgcc 20122908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 338 - 415
Target Start/End: Original strand, 8122960 - 8123037
Alignment:
Q  338 tcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcg 415  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| ||  |||  ||||||||||||    
T  8122960 tcaatttcattactgacttgagcgttggagtgctaacgtgcctgcatacacctttcattttaccgtgaagactcatcg 8123037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 263 - 403
Target Start/End: Original strand, 20118948 - 20119088
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||||||||||||||||||||| |||||   |||| ||||| | |||| ||||  ||   |||| ||||  ||||||||||| |||    
T  20118948 cgcctatataagggtgaacttgcttcaccctcaaggtacacaatactttccacaatatttctaacactttcactctcagttcccatactgacttgatcgt 20119047  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccac 403  Q
    |   ||||||||||||||||| | ||| || ||||||||||    
T  20119048 caaggtgctaacgtgcctgcaggaaccctttgttccaccac 20119088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 337 - 412
Target Start/End: Original strand, 17485669 - 17485744
Alignment:
Q  337 ctcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactca 412  Q
    |||||||||||||||||||||||||| || ||||||| |||||  ||  |||||||||||||||| ||||||||||    
T  17485669 ctcaattccattactgacttgagcgttggggtgctaatgtgcccacagacacctttcgttccaccgcgaagactca 17485744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 319 - 439
Target Start/End: Complemental strand, 21652706 - 21652587
Alignment:
Q  319 acttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccg 418  Q
    |||||||||||| |||  || | |||||||||||||||||| ||   |||||||| | || |||| |||| ||||||||||||||||||||||||||||     
T  21652706 acttcttacacattctctcttagttccattactgacttgagagtttaagtgctaatg-gcttgcaggcacgtttcgttccaccacgaagactcatcgcca 21652608  T
Q  419 ccgtgtcggaagccattaccg 439  Q
    |||   |||||||| ||||||    
T  21652607 ccgcaccggaagccgttaccg 21652587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 267 - 422
Target Start/End: Complemental strand, 20622524 - 20622367
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttctt--acacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||||||||||||||||||| |    || |||||||||  ||||  |  ||||| | || ||| ||  |||||||||||||||||||     
T  20622524 tatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaccactttatctacacactatttctctatctcattactgacttgagcgtca 20622425  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
     |||| |||| |||||||| | |||||||||| |||  |||||||||| ||| |||||    
T  20622424 aagtgttaacatgcctgcaggaacctttcgtttcactgcgaagactcaacgcggccgt 20622367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 410
Target Start/End: Original strand, 21342260 - 21342405
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    ||||||||||||| | ||| |||||||||||| | |    || |||||||||| ||||  || ||| ||||  ||| ||||||||||||||||||||| |    
T  21342260 cctatataagggtaaccttacttcaccctcaatgtatgattcacttttcacaacactttctatacactctttatcagttccattactgacttgagcgttg 21342359  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagact 410  Q
     | || ||||||||||||||  ||||||||| |||||  |||||||    
T  21342360 tactgttaacgtgcctgcatatacctttcgtcccaccgtgaagact 21342405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 249
Target Start/End: Original strand, 7835470 - 7835541
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaac 249  Q
    |||||| |||| |||||||| | |||||| ||| ||||||||||||||||||| | ||||||||||| ||||    
T  7835470 aggatcgccctgcacgtgtcctcctccgttcctgatcacacgtcgcataacccagagacggttatggacaac 7835541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 348 - 395
Target Start/End: Original strand, 9007832 - 9007879
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgt 395  Q
    ||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  9007832 tactgacttgagcgttggagtgttaacgtgcctgcaggcacctttcgt 9007879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 422
Target Start/End: Original strand, 28723745 - 28723904
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||| |||  ||| ||||||||| ||  ||   || |||||||||| | ||  |||||| |||| || | |||||||| ||||||||||||    
T  28723745 cgcctatataaggatgacattgtttcaccctccagatacgattcacttttcacaacattttctacacactctttcttagttccattagtgacttgagcgt 28723844  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
     ||| ||| |||||||||    |||| |||||||||||| ||||||||||| ||| ||||    
T  28723845 tggattgccaacgtgcctattagcacatttcgttccaccgcgaagactcattgccaccgt 28723904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 337 - 421
Target Start/End: Complemental strand, 17396781 - 17396696
Alignment:
Q  337 ctcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc-acgaagactcatcgccgccg 421  Q
    |||| |||||||| ||||||||  |||||||||||||||||||| || ||| ||||| ||||||| | |||||| | |||||||||    
T  17396781 ctcagttccattattgacttgattgtcggagtgctaacgtgcctacaagcaactttcattccaccgaagaagacgcttcgccgccg 17396696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 35314178 - 35314236
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaa 406  Q
    ||||||||||||||| |||||||||||||| |||||  |||| | ||||||||| ||||    
T  35314178 tactgacttgagcgttggagtgctaacgtgtctgcaaacaccctccgttccaccgcgaa 35314236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 410
Target Start/End: Complemental strand, 1475783 - 1475722
Alignment:
Q  349 actgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagact 410  Q
    |||||||||||||| ||||||||| | ||||||||  |||||||||| |||||  |||||||    
T  1475783 actgacttgagcgttggagtgctagcatgcctgcagacacctttcgtcccaccgtgaagact 1475722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 417
Target Start/End: Original strand, 13085089 - 13085198
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaag 407  Q
    |||||||||| ||||  |||| | |||| |||| || ||||| |||||||||||| ||| |||| || ||||||||  || ||||| | |||||||||||    
T  13085089 cttttcacaatactttctacatattctttctcagtttcattattgacttgagcgttggaatgcttacatgcctgcagacatctttcatcccaccacgaag 13085188  T
Q  408 actcatcgcc 417  Q
    |  |||||||    
T  13085189 aaccatcgcc 13085198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 422
Target Start/End: Original strand, 30429972 - 30430029
Alignment:
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    ||||||||| ||||||||||||||||||||| ||| ||  ||||||| ||||| ||||    
T  30429972 gagtgctaatgtgcctgcatgcacctttcgtcccagcataaagactcgtcgccaccgt 30430029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 143 - 231
Target Start/End: Original strand, 12731422 - 12731510
Alignment:
Q  143 atgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccg 231  Q
    ||||||||||||||||||||   |||||||  |  || |||||| |||| ||||| | ||| ||||| ||||||||| |||||||||||    
T  12731422 atgcaccgtgccacacaggagtgcgccctcgcgcgagaatcaccttacatgtgtcctactctgtcccaaatcacacgccgcataacccg 12731510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 17396840 - 17396808
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagg 298  Q
    |||||||||||||||| ||||||||||||||||    
T  17396840 ctatataagggtgaacatgcttcaccctcaagg 17396808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 120; Significance: 3e-61; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 147 - 445
Target Start/End: Original strand, 31295400 - 31295688
Alignment:
Q  147 accgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggcc 246  Q
    |||||||||||||||| | |||  ||| | |||||||||||||||||||||||||||||| ||||||||||||  ||||||||||  |||||||||||||    
T  31295400 accgtgccacacaggagcgcgctttcacgcaaggatcaccctacacgtgtcttgctccgttcctaatcacacgaagcataacccgaagacggttatggcc 31295499  T
Q  247 aacacttcttacacgtcgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattcca 346  Q
    ||| |           ||||||| |||||||||||||||||||||||| ||| ||| ||| |||||||||| ||||| |||||| |||| |||| || ||    
T  31295500 aacccc----------cgcctatgtaagggtgaacttgcttcaccctcgaggtacatatcacttttcacaacacttcatacacactctttctcagtttca 31295589  T
Q  347 ttactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||||||||||||||||| ||||||||| |||||||| ||| ||||||||||||| ||||||||| ||| |||||   ||||||| ||||| |||||||    
T  31295590 ttactgacttgagcgtcgaagtgctaacatgcctgcaggcaactttcgttccacctcgaagactcgtcgtcgccgcaccggaagctattactgtcacac 31295688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 265 - 445
Target Start/End: Complemental strand, 9403290 - 9403115
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||||| |||| |||| |||||||| ||||||||||||||    
T  9403290 cctatataagggtgaacttgcttcaccctcaaggtacacatcactttccacaacacttcttacacactctttctcagttccattattgacttgagcgtcg 9403191  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||| |||||||||||||     | |||| ||||||||||| |||||||||| ||| |||| |||||| ||||||||||||    
T  9403190 gagttctaacgtgcctgc-----cgtttcattccaccacgatgactcatcgctgccatgtcagaagccgttaccgtcacac 9403115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 266 - 439
Target Start/End: Original strand, 22497272 - 22497445
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    ||||||| ||||||||||||||||||||||||| ||||| | |||||||||| |||| ||| ||  |||   ||  ||||||||||||||||||||||||    
T  22497272 ctatatatgggtgaacttgcttcaccctcaaggtacacaacacttttcacaacactttttatactctctctttctgttccattactgacttgagcgtcgg 22497371  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccg 439  Q
    |||||||||||| ||||| ||||||||||||||| | |||||||||||||||||||  ||||||||||||||||    
T  22497372 agtgctaacgtgtctgcaagcacctttcgttccatcgcgaagactcatcgccgccgcatcggaagccattaccg 22497445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 265 - 445
Target Start/End: Original strand, 19730564 - 19730743
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| ||| | |||||||||||| |||| |||| |||||||| |||||||||||| |    
T  19730564 cctatataagggtgaacttgcttcaccctcaaggtacacatcactttacacgacacttcttacacactctttctcagttccattattgacttgagcgttg 19730663  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||||||||| |||||||||||| ||||  |||||||||||||||||| ||||| |||| || ||| | |||||| |||||    
T  19730664 gagtgctaacatgcctgcatgca-ctttacttccaccacgaagactcaacgccgtcgtgccgaaagtcgttaccgccacac 19730743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 263 - 445
Target Start/End: Original strand, 12449554 - 12449736
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||| |||||| ||||||||||||| ||||||| |||| ||||| |||||||||||| ||||  |||  ||||||||||||||||||||    
T  12449554 cgcctatataagggtaaacttgattcaccctcaaggtacacatcactttccacaacacttcttacacactctttttcagctccattactgacttgagcgt 12449653  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    | |||||||||||||||| ||  |||||||||| |||||||||||||||||| |||| ||| || ||| | |||| |||||||    
T  12449654 cagagtgctaacgtgcctacagacacctttcgtcccaccacgaagactcatcaccgcggtgccgaaagtcgttactgtcacac 12449736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 177 - 413
Target Start/End: Complemental strand, 34064391 - 34064165
Alignment:
Q  177 aaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataaggg 276  Q
    |||||||||| |||| ||||| | || || ||||||||||  | |||||||||||| |||||||||||||||| |           ||||||||||||||    
T  34064391 aaggatcaccatacatgtgtcctacttcgcccctaatcacgtgccgcataacccggtgacggttatggccaactcg----------cgcctatataaggg 34064302  T
Q  277 tgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgt 376  Q
    |||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||| || | || |||||||||||||| ||||  |||| ||||||    
T  34064301 tgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttcttagtttcattactgacttgaacgtcatagtgttaacgt 34064202  T
Q  377 gcctgcatgcacctttcgttccaccacgaagactcat 413  Q
    |||||||  |||||||||||| |||  ||||||||||    
T  34064201 gcctgcacacacctttcgttctaccgtgaagactcat 34064165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 263 - 444
Target Start/End: Original strand, 19277047 - 19277234
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattact-------gact 355  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||| |||| ||||||||||       ||||    
T  19277047 cgcctatataagggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttctcatttccattactcacgagcgact 19277146  T
Q  356 tgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcaca 444  Q
    ||||||||||||| ||| | || ||||| |||||||| ||||||||   ||||||||||||||||||  ||||| || |||||||||||    
T  19277147 tgagcgtcggagttctagc-tgtctgcaggcaccttttgttccaccggaaagactcatcgccgccgtaccggaaaccgttaccgtcaca 19277234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 208 - 430
Target Start/End: Original strand, 27860874 - 27861086
Alignment:
Q  208 cctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggtgaacttgcttcaccctcaagggacacatcc 307  Q
    |||||||||||| |||||||||||| ||||||||||||||||||           |||||||| ||||||||||||||||||||||||| | |||||||     
T  27860874 cctaatcacacgccgcataacccggagacggttatggccaacacg----------cgcctataaaagggtgaacttgcttcaccctcaaagtacacatca 27860963  T
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaag 407  Q
    |||||||||| |||||||||||  |||   ||| |||||||||||||||||| ||  |||| ||||| ||||||||  ||||||| ||||||||||  |     
T  27860964 cttttcacaacacttcttacactctctctttcagttccattactgacttgagtgttagagtactaacatgcctgcagacaccttttgttccaccacagaa 27861063  T
Q  408 actcatcgccgccgtgtcggaag 430  Q
    ||||||| ||| |||| ||||||    
T  27861064 actcatcaccgtcgtgccggaag 27861086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 263 - 400
Target Start/End: Original strand, 12424285 - 12424422
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||||||||||||||||| |||| ||||| | |||||||||| |||| ||| ||  |||  |||| |||||||||||||||||  ||    
T  12424285 cgcctatataagggtgaacttgcttcacccttaaggtacacaacacttttcacaacactttttagactttctctctcagttccattactgacttgattgt 12424384  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccac 400  Q
    || |||||||||||||||||| ||||||||||||||||    
T  12424385 cgtagtgctaacgtgcctgcaggcacctttcgttccac 12424422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 264 - 417
Target Start/End: Complemental strand, 16343698 - 16343545
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||| |||||||||||||||  |||| | ||||||| |||| ||||| |||||||||||  |||  |||| |||||||||||||||||| ||     
T  16343698 gcctatataagtgtgaacttgcttcacattcaaagtacacatcactttccacaacacttcttacactttctctctcagttccattactgacttgagtgtt 16343599  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    |||||||||||||||||||| ||||| |||| |||||  |||||||||||||||    
T  16343598 ggagtgctaacgtgcctgcaggcacccttcgctccactgcgaagactcatcgcc 16343545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 266 - 422
Target Start/End: Original strand, 12487970 - 12488126
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    |||||||||||||||||||  |||||||||| | ||||||| |||||||||| ||| |||||||| |||   | | ||| |||| |||||| |||||  |    
T  12487970 ctatataagggtgaacttgtatcaccctcaatgtacacatcacttttcacaacactacttacacactctattttagttctattattgacttcagcgttag 12488069  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||||||| ||||||    
T  12488070 agtgctaacgtgcatgcatgcacccttcgttccacaacgaagactcatcgtcgccgt 12488126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 264 - 411
Target Start/End: Complemental strand, 20148434 - 20148289
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    |||||||||||||||| ||||||||||| |||||| |    || |||||||||| ||||  |||||  |||| ||||||||||||||| |||||||||      
T  20148434 gcctatataagggtgaccttgcttcaccatcaaggtatgattcacttttcacaacactttctacac--tctttctcaattccattactaacttgagcgat 20148337  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactc 411  Q
    |||||||||||||| |||||||||| |||||||||||| | |||||||    
T  20148336 ggagtgctaacgtgtctgcatgcacttttcgttccaccgcaaagactc 20148289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 264 - 411
Target Start/End: Original strand, 22184394 - 22184539
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    |||||||||||||||| ||||||||||| |||||| |    || |||||||||| ||||  |||||  |||| ||||||||||||||| |||||||||      
T  22184394 gcctatataagggtgaccttgcttcaccatcaaggtatgattcacttttcacaacactttctacac--tctttctcaattccattactaacttgagcgat 22184491  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactc 411  Q
    |||||||||||||| |||||||||| |||||||||||| | |||||||    
T  22184492 ggagtgctaacgtgtctgcatgcacttttcgttccaccgcaaagactc 22184539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 263 - 401
Target Start/End: Complemental strand, 19305584 - 19305446
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||| ||||||||| |||||||||||||||||| |    || |||||||||| ||||  |||||| ||||||||| |||||||||||||||||||||    
T  19305584 cgcctatttaagggtgaccttgcttcaccctcaaggtatgattcacttttcacaacactttctacacactcttactcagttccattactgacttgagcgt 19305485  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
       |||||||||||||||  | | |||||||||||||||    
T  19305484 ttaagtgctaacgtgcctctaggaacctttcgttccacc 19305446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 269 - 422
Target Start/End: Complemental strand, 23768307 - 23768154
Alignment:
Q  269 tataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagt 368  Q
    ||||||||||||||||||| |||||  ||| ||||||| |||| ||||| |||||||||||| | |   ||| ||| ||||||||||||||| | |||||    
T  23768307 tataagggtgaacttgctttacccttgaggtacacatcactttccacaacacttcttacacactatctttcagttcaattactgacttgagcattggagt 23768208  T
Q  369 gctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||||  |||||| |  |||| ||||||||||  ||||||||||||||||||||    
T  23768207 gctaatatgcctgtaaacacccttcgttccacgccgaagactcatcgccgccgt 23768154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 263 - 446
Target Start/End: Complemental strand, 33596981 - 33596798
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||| |||||||||||||| |||||||| |    ||| ||||||||| ||||  |||||| | || || | || ||||||||| ||||||||    
T  33596981 cgcctatataagagtgaacttgcttcatcctcaaggtatgattccattttcacaacactttctacacactttttcttagtttcattactgagttgagcgt 33596882  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacact 446  Q
      ||||| ||| ||||||||| | ||||||||||||||| | | || || |||||||||| || |||||| | |||||||||||    
T  33596881 tagagtgttaatgtgcctgcaggtacctttcgttccaccgcaaggattcttcgccgccgtatcagaagccttcaccgtcacact 33596798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 377
Target Start/End: Original strand, 14921232 - 14921346
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||| ||||||||||||||||||| | ||||||| | |||||||||  |||||||||||  |||  ||||| |||  |||||||||||||||    
T  14921232 cgcctatataagtgtgaacttgcttcaccctccaaggacacaacacttttcacatcacttcttacactttctctctcaagtcccatactgacttgagcgt 14921331  T
Q  363 cggagtgctaacgtg 377  Q
     |||||| |||||||    
T  14921332 tggagtgttaacgtg 14921346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 265 - 435
Target Start/End: Complemental strand, 18147424 - 18147254
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||  |||||||||||| |||| |    || |||||||||| ||||  |||||| |||| |||  |||||||| |||||||||||| |    
T  18147424 cctatataagggtgacattgcttcaccctaaaggtatgagtcacttttcacaacactttctacacactctttctcggttccattagtgacttgagcgttg 18147325  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccatt 435  Q
    ||||| |||||| ||| || |||||||||||| ||||  |||||||||||| |  |||  |||||||||||    
T  18147324 gagtgttaacgttcctacaggcacctttcgtttcaccgagaagactcatcgtcatcgtaccggaagccatt 18147254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 342 - 411
Target Start/End: Original strand, 19331730 - 19331799
Alignment:
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactc 411  Q
    ||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||| |||||||||    
T  19331730 ttccattactgacttaagcgtcggagtactaacgtacctgcaagcacctttcgttccaccgcgaagactc 19331799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 400
Target Start/End: Original strand, 25008417 - 25008498
Alignment:
Q  319 acttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccac 400  Q
    |||| ||||||| |||| |||||||||||||||||||||||||| |||||| |||||||||  |||||||||||||| ||||    
T  25008417 actttttacacactctttctcaattccattactgacttgagcgttggagtgttaacgtgccgacatgcacctttcgtcccac 25008498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 264 - 410
Target Start/End: Complemental strand, 34187413 - 34187272
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||||||||    ||||||||||||||| |||  || |||| ||| | |||| ||||||| |||| |||| |||||||||||||||||| ||     
T  34187413 gcctatataagggtga----gcttcaccctcaaggtacaattcacttt-caccacactttttacacactctttctcagttccattactgacttgagtgtt 34187319  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagact 410  Q
    || ||||||||||| |||||  |||||||||||||||| | ||||||    
T  34187318 ggtgtgctaacgtgtctgcagacacctttcgttccaccgcaaagact 34187272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 401
Target Start/End: Original strand, 13823349 - 13823486
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||| |||||||||||||||||||||||| ||||| | ||||| |||| | ||| ||   | | || |||| ||||||||||||||||| |||    
T  13823349 cgcctatataaaggtgaacttgcttcaccctcaaggtacacaacactttttacaacaattc-taaggattttttctcagttccattactgacttgatcgt 13823447  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
     |||||||||||  || |||  |||||||||||||||||    
T  13823448 tggagtgctaactagcttgccagcacctttcgttccacc 13823486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 263 - 410
Target Start/End: Complemental strand, 22572164 - 22572018
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||| |||||| |||||||||||||||||||||||  |    || |||| ||||| || |  |||||| ||||  ||||||||||||||||| |||||||    
T  22572164 cgccaatataaaggtgaacttgcttcaccctcaagatatgattcactttacacaacaccttctacacactcttt-tcaattccattactgacatgagcgt 22572066  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagact 410  Q
    |  ||||||||||||||||||  ||||||| |||||||  ||||||||    
T  22572065 catagtgctaacgtgcctgcagccaccttttgttccacggcgaagact 22572018  T

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Target: chr6; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 345 - 414
Target Start/End: Complemental strand, 30681030 - 30680961
Alignment:
Q  345 cattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||||||||||||||||| ||||||||||||||  ||||  |||||||||| ||||| ||||||||||||    
T  30681030 cattactgacttgagcgttggagtgctaacgtgattgcagacacctttcgtcccaccgcgaagactcatc 30680961  T

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Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 403
Target Start/End: Complemental strand, 14080558 - 14080464
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccac 403  Q
    |||||||||| ||||  |||||| |||| |||| ||| |||||| ||||||||||| ||||||||| ||||||| | ||||||||||| |||||||    
T  14080558 cttttcacaacacttactacacactctttctcagttc-attactaacttgagcgtcagagtgctaatgtgcctgtaggcacctttcgtcccaccac 14080464  T

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Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 263 - 397
Target Start/End: Complemental strand, 18566777 - 18566643
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||  ||||||||||| |||||||||||| | || || ||||| ||||  |||  ||||||||||| |||| ||||||||||||||  ||  |    
T  18566777 cgcctatatagaggtgaacttgcctcaccctcaaggtagacttcactttttacaacgctttctacacaatctttctcagttccattactgactccagtct 18566678  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttc 397  Q
    ||  |||||||||| ||||||  ||||||| ||||    
T  18566677 cgttgtgctaacgtacctgcagacaccttttgttc 18566643  T

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Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 9277327 - 9277419
Alignment:
Q  319 acttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactc 411  Q
    |||| ||||| | |||| |||| ||||| |||||||||||||||   |||||||||||| ||||| | ||||||||||||||| | |||||||    
T  9277327 actttttacatactctttctcagttccaatactgacttgagcgttatagtgctaacgtgtctgcaggaacctttcgttccaccgcaaagactc 9277419  T

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Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 337 - 401
Target Start/End: Original strand, 9292064 - 9292128
Alignment:
Q  337 ctcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||| ||||| |||||||||||||||  | |||||||||||| |||| |||||||||||||||||    
T  9292064 ctcagttccaatactgacttgagcgttagcgtgctaacgtgcttgcaggcacctttcgttccacc 9292128  T

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Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 421
Target Start/End: Complemental strand, 11087620 - 11087464
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||||||| |||| |||||||| |    || |||||||||| ||    |||| | |||| |||| || |||||||||||| || |||     
T  11087620 cctatataagggtgaacttgtttcatcctcaaggtatgattcacttttcacaacacaatctacatactctttctcagttacattactgacttaagggtca 11087521  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccg 421  Q
     |||||||| ||| |||||  || ||||||||||||| |||||||||| ||| ||||    
T  11087520 aagtgctaatgtgtctgcagacagctttcgttccaccgcgaagactcagcgctgccg 11087464  T

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Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 439
Target Start/End: Complemental strand, 31125305 - 31125213
Alignment:
Q  347 ttactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccg 439  Q
    |||| ||||||||| | ||||||||||||||||| || ||||| ||| ||||||||| |||||| |||| | ||||  ||||| |||||||||    
T  31125305 ttacagacttgagcattggagtgctaacgtgcctacaagcacccttcattccaccacaaagactaatcgtcaccgtaccggaaaccattaccg 31125213  T

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Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 304
Target Start/End: Original strand, 14184529 - 14184568
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacaca 304  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  14184529 cctatataagggtgaacttgcttcaccctcaaggtacaca 14184568  T

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Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 358 - 445
Target Start/End: Original strand, 31423894 - 31423981
Alignment:
Q  358 agcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    ||||||| |||||||||||| ||||| | |||||||||||||||||||||| ||| ||  |||||  ||||| || |||| |||||||    
T  31423894 agcgtcgaagtgctaacgtgtctgcaaggacctttcgttccaccacgaagattcaacgttgccgtaccggaaaccgttactgtcacac 31423981  T

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Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 393
Target Start/End: Original strand, 689829 - 689958
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||| |||| | || |||||||| ||   || |||||||||| ||||  ||||||  ||| |||| ||||||||||||||||||| |    
T  689829 cgcctatataagggtgaccttgat-cagcctcaaggtacgattcacttttcacaacactttatacacacactttctcagttccattactgacttgagcat 689927  T
Q  363 cggagtgctaacgtgcctgcatgcacctttc 393  Q
     | |||||||| || ||||||  ||||||||    
T  689928 tgcagtgctaatgtacctgcaaacacctttc 689958  T

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Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 353 - 401
Target Start/End: Original strand, 14184604 - 14184652
Alignment:
Q  353 acttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||||| |||||||||||||| |||||||||  ||||||||||||||||    
T  14184604 acttgatcgtcggagtgctaatgtgcctgcaatcacctttcgttccacc 14184652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 317
Target Start/End: Complemental strand, 18994099 - 18994045
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaa 317  Q
    ||||||||||||||||||||||||||| ||||| || ||||| | ||||| ||||    
T  18994099 cgcctatataagggtgaacttgcttcaacctcagggtacacaacacttttaacaa 18994045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 180 - 230
Target Start/End: Original strand, 22497196 - 22497246
Alignment:
Q  180 gatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataaccc 230  Q
    |||||| ||||||||| | | ||||| ||||||||||||||||||||||||    
T  22497196 gatcacgctacacgtgcccttctccgcccctaatcacacgtcgcataaccc 22497246  T

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Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 297
Target Start/End: Original strand, 31423808 - 31423842
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaag 297  Q
    |||||||||||||||| ||||||||||||||||||    
T  31423808 cgcctatataagggtgcacttgcttcaccctcaag 31423842  T

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Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 401
Target Start/End: Complemental strand, 11714203 - 11714154
Alignment:
Q  352 gacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||||||| || ||||||  ||||||||||||||||||||||||| ||||    
T  11714203 gacttgagtgttggagtgtgaacgtgcctgcatgcacctttcgttgcacc 11714154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 385 - 417
Target Start/End: Complemental strand, 22692101 - 22692069
Alignment:
Q  385 gcacctttcgttccaccacgaagactcatcgcc 417  Q
    ||||||||||||||||| |||||||||||||||    
T  22692101 gcacctttcgttccaccgcgaagactcatcgcc 22692069  T

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Target: chr1 (Bit Score: 116; Significance: 8e-59; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 75 - 443
Target Start/End: Original strand, 23728613 - 23728970
Alignment:
Q  75 gcacgctgacacgtggccagacttgcaccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccctcat 174  Q
    |||||| |||||||| |  |||||||| ||| | |||||| | || |||| ||| ||| |||  |||  |||| |||| |||||||||   |||| |||     
T  23728613 gcacgccgacacgtgtctggacttgcatcgcctcaagacttcacacccaagggagcacaccagcttgcgtgcatcgtgtcacacaggagtgcgccttcac 23728712  T
Q  175 gtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgt-cgcctatataa 273  Q
    | ||||||||||||||||||||| ||||| ||||||||||||| | |||||||   |  ||||||||||||||||           || |||||||||||    
T  23728713 ggaaggatcaccctacacgtgtcctgctctgtccctaatcacatgccgcataatttgaagacggttatggccaac-----------gtgcgcctatataa 23728801  T
Q  274 gggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaa 373  Q
    ||||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||| |||| |||| |||||||| |||||||||||||  | ||||||    
T  23728802 gggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttctcatttccattaatgacttgagcgtcataatgctaa 23728901  T
Q  374 cgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcac 443  Q
    ||||||||||| ||||||||||| |||| ||||||||||||| || ||||||||||| ||||||||||||    
T  23728902 cgtgcctgcatccacctttcgtt-caccgcgaagactcatcgtcgtcgtgtcggaagtcattaccgtcac 23728970  T

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Target: chr1; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 267 - 445
Target Start/End: Original strand, 4601462 - 4601640
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||||  |||| ||||||| | || |||| || ||||||||||||||||||||||    
T  4601462 tatataagggtgaacttgcttcaccctcaagggacacatcaaatttcacagcacttattacacattatttctcagtttcattactgacttgagcgtcgga 4601561  T
Q  367 gtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||||||||||||||||  |||||||||||||||| |||||||| ||||||||| || ||||| | |||||||||||||    
T  4601562 gtgctaacgtgcctgcagtcacctttcgttccaccgcgaagacttatcgccgccatgccggaaacaattaccgtcacac 4601640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 263 - 422
Target Start/End: Complemental strand, 25408216 - 25408057
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||  ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||   ||| || |||||||||||||||| |    
T  25408216 cgcctatgaaagggtgaacttgcttcaccctcaagggacacatcacttttcacaacacttcttacacactctctttcagtttcattactgacttgagcat 25408117  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
     |||||||||||||| ||||| ||||||||| ||||||| |  |||||||| ||||||||    
T  25408116 tggagtgctaacgtgtctgcaggcacctttcattccaccgcagagactcattgccgccgt 25408057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 313 - 445
Target Start/End: Original strand, 14255051 - 14255183
Alignment:
Q  313 cacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactca 412  Q
    ||||| |||||||||||| |||| |||| || ||||| |||||||||||| ||||||||| ||||| |||| ||||| ||||||||||||||||||||||    
T  14255051 cacaacacttcttacacactctttctcagtttcattaatgacttgagcgttggagtgctatcgtgcttgcaggcacccttcgttccaccacgaagactca 14255150  T
Q  413 tcgccgccgtgtcggaagccattaccgtcacac 445  Q
    ||||||||| | |||||||||||||||||||||    
T  14255151 tcgccgccgcgccggaagccattaccgtcacac 14255183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 263 - 419
Target Start/End: Complemental strand, 26977860 - 26977704
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||| || ||||||||||||||||| |    ||  ||||||||| ||||  |||||| |||| |||  |||||||||||||||||||||    
T  26977860 cgcctatataagggtcaaattgcttcaccctcaaggtatgattcatttttcacaatactttctacacactctttctcggttccattactgacttgagcgt 26977761  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgc 419  Q
     |||||||||||||||||||| ||||||||||||||||| | |||| ||||| ||||    
T  26977760 tggagtgctaacgtgcctgcaggcacctttcgttccaccgcaaagattcatcaccgc 26977704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 265 - 418
Target Start/End: Complemental strand, 12177504 - 12177351
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    ||||||||||| ||||||||||||  |||||||| | |  || |||||||||| ||||  |||||| |||| |||| |||||||||||||||||| ||||    
T  12177504 cctatataaggttgaacttgcttcctcctcaaggtataattcacttttcacaacactttctacacactctttctcagttccattactgacttgagtgtcg 12177405  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccg 418  Q
    |||||||||||||| || | ||||||||||||||||| |||  ||||| |||||    
T  12177404 gagtgctaacgtgcatgtaggcacctttcgttccaccgcgattactcaacgccg 12177351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 263 - 431
Target Start/End: Original strand, 21682561 - 21682729
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatct-tactcaattccattactgacttgagcg 361  Q
    |||||||||||||||||| |||| |||||||||||| ||||||  |||||||||| | |||||||||| ||| | || | ||||||||||||||||||||    
T  21682561 cgcctatataagggtgaatttgcgtcaccctcaaggtacacattacttttcacaatatttcttacacactctcttct-agttccattactgacttgagcg 21682659  T
Q  362 tcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagc 431  Q
    | ||||||| ||||| |||  | ||||||||||||||||  |  |||||||||||||||||  |||||||    
T  21682660 ttggagtgcaaacgtacctataggcacctttcgttccacagcagagactcatcgccgccgtaccggaagc 21682729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 178 - 430
Target Start/End: Original strand, 16299479 - 16299711
Alignment:
Q  178 aggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatataagggt 277  Q
    |||||||||||||  ||||| ||||||||| ||||| ||||| ||||||||||||  ||| |||||||||||||       |||||   |||||||||||    
T  16299479 aggatcaccctacttgtgtcctgctccgtctctaattacacgccgcataacccgg--acgattatggccaacac-------acgtc---tatataagggt 16299566  T
Q  278 gaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtg 377  Q
    ||||||||||||        | |||||||  ||||||||| ||||||||| || |||| |||| || ||||||| |||||| |||||||||||||| |||    
T  16299567 gaacttgcttcat-------gtacacatcatttttcacaacacttcttacgcactctttctcagtttcattacttacttgaacgtcggagtgctaatgtg 16299659  T
Q  378 cctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaag 430  Q
    | ||||  ||| |||||||||||| | |||||||||||||||||| |||||||    
T  16299660 catgcagacacgtttcgttccaccgc-aagactcatcgccgccgtatcggaag 16299711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 399
Target Start/End: Complemental strand, 3590947 - 3590811
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaaggg-acacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcg 361  Q
    |||||||||||||||||||||||||||||||||| || ||||| | ||||||||||  || || | ||  |  | |||| ||||||||||||||||| ||    
T  3590947 cgcctatataagggtgaacttgcttcaccctcaaaggtacacaacacttttcacaactctcctaagacttttct-ctcagttccattactgacttgatcg 3590849  T
Q  362 tcggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    |||||||||||| |||||||||||||||||||||||||    
T  3590848 tcggagtgctaaggtgcctgcatgcacctttcgttcca 3590811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 401
Target Start/End: Original strand, 21098819 - 21098954
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||||||||||||||||||||| ||||| | ||||||| || |||| | | ||  |  || ||| ||||||||||||||||| |||||    
T  21098819 cctatataagggtgaacttgcttcaccctcaaggtacacaacacttttcataacacttataatacttttcta-tcagttccattactgacttgatcgtcg 21098917  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    ||||||||| |||||||||  ||||||||||||||||    
T  21098918 gagtgctaatgtgcctgcagccacctttcgttccacc 21098954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 263 - 447
Target Start/End: Complemental strand, 52565700 - 52565516
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||| |||||||| |||||||||||||||||||||  |    || |||||||||| ||||  | | || ||||  ||| |||| ||||||||||||||||    
T  52565700 cgccaatataaggatgaacttgcttcaccctcaagttatgattcacttttcacaacactttctgcgcactctttttcagttcctttactgacttgagcgt 52565601  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacactc 447  Q
    | ||||||||||||| ||||| ||||||||||||||| |||||| |||||||||| || |  ||||||   ||||||||||||||    
T  52565600 cagagtgctaacgtgtctgcaggcacctttcgttccatcacgaaaactcatcgccaccataccggaagttgttaccgtcacactc 52565516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 264 - 415
Target Start/End: Complemental strand, 22414894 - 22414743
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||| |||| |||||||||||||||||||||  |    || |||||||||| ||||  |||||| | ||  ||| || |||||||||||||||||||    
T  22414894 gcctatacaaggatgaacttgcttcaccctcaagatatgattcacttttcacaacactttctacacactttttttcagtttcattactgacttgagcgtc 22414795  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcg 415  Q
     ||||||||||||||||||  ||||||||||||||||| | |||||||||||    
T  22414794 agagtgctaacgtgcctgcgggcacctttcgttccaccgcaaagactcatcg 22414743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 308 - 414
Target Start/End: Original strand, 33101523 - 33101629
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaag 407  Q
    |||||||||| ||||  |||||| | || |||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||| ||  |||||    
T  33101523 cttttcacaacactttctacacactttttctcagttccattaccgacttgagcgttggagtgctaacgtgcctgcatgcacctttcattctacagcgaag 33101622  T
Q  408 actcatc 414  Q
    |||||||    
T  33101623 actcatc 33101629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 265 - 422
Target Start/End: Complemental strand, 34273205 - 34273048
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||| ||  ||||||||||||||||| |    || |||| ||||| ||||  |||||| |||| |||| |||| |||||||||||||| | |    
T  34273205 cctatataagggcgacattgcttcaccctcaaggtatgagtcactttacacaacactttctacacactctttctcagttccgttactgacttgagcattg 34273106  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||||||||||||| |||| | ||||||||| ||||| | ||||||| ||||| ||||    
T  34273105 gagtgctaacgtgcttgcaggtacctttcgtcccaccgcaaagactcctcgccaccgt 34273048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 265 - 401
Target Start/End: Original strand, 1659762 - 1659898
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||||||||| ||||| ||||  |    || |||||||||| |||||||||||| |||| ||||  ||||||| |||||||||||| |    
T  1659762 cctatataagggtgaacttgctccacccacaagatatttctcacttttcacaacacttcttacacattctttctcagatccattattgacttgagcgttg 1659861  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    ||||| |||||||  || |  ||||||||||||||||    
T  1659862 gagtgataacgtgtatgtagacacctttcgttccacc 1659898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 265 - 417
Target Start/End: Complemental strand, 16050512 - 16050360
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    ||||||||||||||   |||||||| |||||||| |    || |||||||| | ||||  |||||| |||| |||| |||||| | |||||||||||| |    
T  16050512 cctatataagggtggcattgcttcatcctcaaggtatggttcacttttcaccacactttctacacactctttctcagttccatcaatgacttgagcgttg 16050413  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    |||||||||||||||||||   |||||||  |||||| |||||||||||||||    
T  16050412 gagtgctaacgtgcctgcagatacctttctatccaccgcgaagactcatcgcc 16050360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 342 - 417
Target Start/End: Complemental strand, 48637592 - 48637516
Alignment:
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccac-gaagactcatcgcc 417  Q
    |||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||| ||| | ||||||||||||||    
T  48637592 ttccattactgacttgagcgtcagagtgctgacgtgcctgcaggcacctttcgttctaccgcagaagactcatcgcc 48637516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 355 - 422
Target Start/End: Original strand, 5459771 - 5459838
Alignment:
Q  355 ttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||| ||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| ||||    
T  5459771 ttgaacgttggagtgctaacgtacctgcatgcacctttcgtcccaccacgaagactcatcgccaccgt 5459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 348 - 422
Target Start/End: Complemental strand, 8018984 - 8018910
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    ||||||||||||||||| |||||||||||||||| |   ||||||||| ||||||||||||||||||||| ||||    
T  8018984 tactgacttgagcgtcgtagtgctaacgtgcctgtagatacctttcgtcccaccacgaagactcatcgccaccgt 8018910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 417
Target Start/End: Complemental strand, 16030515 - 16030361
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||||||   | ||||| ||||||||| |    || |||||||||| ||||  |||||| ||||| ||| ||||||||||||||||||| |    
T  16030515 cgcctatataagggtggcttagcttcgccctcaaggtatgattcacttttcacaacactttctacacactcttattcagttccattactgacttgagcat 16030416  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
      || || |||||||||||||  |||||||| |||||||  ||||||||||||||    
T  16030415 ttgactgataacgtgcctgcagacacctttcattccaccgtgaagactcatcgcc 16030361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 308 - 422
Target Start/End: Complemental strand, 5671845 - 5671731
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaag 407  Q
    |||||||||| ||||  |||||| |||| |||| |||||||||| |||||||||| ||||||||||||||||| ||  ||||||| | |||| |  | ||    
T  5671845 cttttcacaacactttctacacactctttctcagttccattactaacttgagcgttggagtgctaacgtgcctacaaacaccttttgctccagcgggcag 5671746  T
Q  408 actcatcgccgccgt 422  Q
    |||||||||| ||||    
T  5671745 actcatcgccaccgt 5671731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 346 - 416
Target Start/End: Original strand, 2140998 - 2141068
Alignment:
Q  346 attactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgc 416  Q
    ||||||||||||||||| ||||||||||  ||||||||| |||||||||||| |||  ||||| |||||||    
T  2140998 attactgacttgagcgttggagtgctaagttgcctgcatacacctttcgttctaccgtgaagattcatcgc 2141068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 267 - 399
Target Start/End: Original strand, 23280237 - 23280367
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    ||||||| ||||||||||||||||||||| || |    || |||||||||| |||   ||||||  ||| |||| |||||||||||||||||| ||  ||    
T  23280237 tatataaaggtgaacttgcttcaccctcatggcattattcacttttcacaacacta--tacacacactttctcagttccattactgacttgagagtttga 23280334  T
Q  367 gtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    ||| |||| || ||||| |||||||||||||||    
T  23280335 gtgataacatgtctgcaggcacctttcgttcca 23280367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 414
Target Start/End: Complemental strand, 18246207 - 18246112
Alignment:
Q  319 acttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||| ||| ||| |||| |||||||| | |||| |||||||||| |||||| |||||||| | ||  |||||||||||||||| | ||||||||||    
T  18246207 actttttatacactctttctcaattctaatactcacttgagcgttggagtgttaacgtgcttacagacacctttcgttccaccgccaagactcatc 18246112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 401
Target Start/End: Complemental strand, 46016149 - 46016097
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||||||||||    
T  46016149 tactgatttgatcgtcggagtgctaacgtgcctgca-acacctttcgttccacc 46016097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 399
Target Start/End: Complemental strand, 16522826 - 16522759
Alignment:
Q  332 tcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    |||| ||||||||| ||| |||||||| ||| | ||||||||||||||| ||  ||||||||||||||    
T  16522826 tctttctcaattcctttattgacttgaacgttgaagtgctaacgtgccttcagacacctttcgttcca 16522759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 298
Target Start/End: Complemental strand, 48637659 - 48637624
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagg 298  Q
    |||||||||||||||||||||| |||||||||||||    
T  48637659 cgcctatataagggtgaacttgtttcaccctcaagg 48637624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 14255014 - 14255048
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagg 298  Q
    ||||||||||||||||||||| |||||||||||||    
T  14255014 gcctatataagggtgaacttgtttcaccctcaagg 14255048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 43344498 - 43344572
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||||||||||||||  ||||||||||||  |||||  |||||||| | ||||| | ||||||||||||| ||||    
T  43344498 tactgacttgagcgttcgagtgctaacgtttctgcagacacctttcatcccaccgcaaagactcatcgccaccgt 43344572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 399
Target Start/End: Complemental strand, 30732549 - 30732501
Alignment:
Q  351 tgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttcca 399  Q
    |||||||||| | |||||||||||||||||||| ||||| | |||||||    
T  30732549 tgacttgagcattggagtgctaacgtgcctgcaggcaccctccgttcca 30732501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 115; Significance: 3e-58; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 144 - 445
Target Start/End: Complemental strand, 379945 - 379654
Alignment:
Q  144 tgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatg 243  Q
    ||||||||||||||||||| | |||| |||    |||||||||||||||||||| |||||||||| |||||||||| |||||||  | | || |||||||    
T  379945 tgcaccgtgccacacaggagcgcgccttcacaagaggatcaccctacacgtgtcctgctccgtccataatcacacgccgcataattcagagatggttatg 379846  T
Q  244 gccaacacttcttacacgtcgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaatt 343  Q
     ||||||            |||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| |||||||||||| |||| |||| ||    
T  379845 accaacatg----------cgcctatatacgggtgaacttgcttcaccctcaaggtacacatcacttttcacaacacttcttacacactctttctcagtt 379756  T
Q  344 ccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcac 443  Q
    ||||||||||||| || |||  |||||||||||||||  ||||||||||||||||||| ||||||||||||| ||||||  |||||||  |||| |||||    
T  379755 ccattactgacttcagtgtcaaagtgctaacgtgcctagatgcacctttcgttccaccgcgaagactcatcgtcgccgtaccggaagctgttacagtcac 379656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 263 - 377
Target Start/End: Original strand, 120982 - 121096
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||  |||||| |||| |||| ||||||||||||||| ||| |    
T  120982 cgcctatataagggtgaatttgcttcaccctcaaggtacacatcacttttcacaacactttatacacactctttctcagttccattactgacttaagcat 121081  T
Q  363 cggagtgctaacgtg 377  Q
    | |||| ||||||||    
T  121082 cagagtactaacgtg 121096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 104; Significance: 1e-51; HSPs: 2)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 72 - 418
Target Start/End: Complemental strand, 23187 - 22851
Alignment:
Q  72 actgcacgctgacacgtggccagacttgcaccgcataaagactccgcatccaaaggaacacgccaaattgtatgcaccgtgccacacaggacctcgccct 171  Q
    ||||||||| |||||||||||||||||||||||| | |||||||| || |||||||| |||||||  ||| |||  |||| |  |||| ||   ||||||    
T  23187 actgcacgccgacacgtggccagacttgcaccgccttaagactccacacccaaaggagcacgccagcttgcatggtccgttctgcacatgagtgcgccct 23088  T
Q  172 catgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctatat 271  Q
    |    |||||| ||||||||| |||| ||||||||||||||||||||  ||||||||| || || ||||||  ||||| |           | |||| ||    
T  23087 cgctcaaggattaccctacacatgtcctgctccgtccctaatcacacaccgcataacctggagagggttatcaccaacgcg----------cacctacat 22998  T
Q  272 aagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgct 371  Q
    ||||||||||||||||||||||||||| |||| || |||||||||| ||||||||||||   || |||| |||||||||||||||||||||| |||||||    
T  22997 aagggtgaacttgcttcaccctcaaggtacacgtcacttttcacaacacttcttacacacgatttctcagttccattactgacttgagcgtcagagtgct 22898  T
Q  372 aacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccg 418  Q
    |||||||| ||| ||||||||||| ||||  ||||||| ||||||||    
T  22897 aacgtgcccgcaggcacctttcgtcccactgcgaagacccatcgccg 22851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205; HSP #2
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 266 - 439
Target Start/End: Original strand, 10889 - 11062
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    |||||||| |||||||||| ||||||||||||| ||||||| |||||||||| |||||||||||| |||   ||| |||||||| |||||||||||| ||    
T  10889 ctatataaaggtgaacttgtttcaccctcaaggtacacatcacttttcacaacacttcttacacactctctttcagttccattattgacttgagcgttgg 10988  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccg 439  Q
    ||||||||||||||||||| ||||||| |||||||| |  ||| |||||||||||||  |||||| | ||||||    
T  10989 agtgctaacgtgcctgcatacaccttttgttccaccgcagagattcatcgccgccgtaccggaagtcgttaccg 11062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 103; Significance: 5e-51; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 186 - 445
Target Start/End: Original strand, 6764 - 7013
Alignment:
Q  186 cctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgt-cgcctatataagggtgaacttg 284  Q
    |||||| ||||| || ||| |||||||||||||| ||||||||| || ||||||||||||||||           || |||||||| |||||||||||||    
T  6764 cctacatgtgtcctgatccatccctaatcacacgccgcataacctggagacggttatggccaac-----------gtgcgcctatacaagggtgaacttg 6852  T
Q  285 cttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcat 384  Q
     ||||||||||||| ||||||| |||||||||| |||||||||||| || | |||| || || |||||||||||||||| |||  ||||||||||| |      
T  6853 tttcaccctcaaggtacacatcacttttcacaacacttcttacacactcgttctcagtttcaatactgacttgagcgtcagagacctaacgtgcctacca 6952  T
Q  385 gcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    ||| ||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  6953 gcatctttcgttccaccacgaagactcatcggcgccgtgccggaagccgttaccgtcacac 7013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 6e-38; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 264 - 400
Target Start/End: Original strand, 24576555 - 24576691
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    |||||||||||||||||||| |||||||||||||| ||||||  |||||||||| |||||||||||| || |  | | ||||||||||||||||||||||    
T  24576555 gcctatataagggtgaacttccttcaccctcaaggtacacattacttttcacaacacttcttacacactcatttttagttccattactgacttgagcgtc 24576654  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccac 400  Q
     ||||| ||||||||||||| ||||||||||||||||    
T  24576655 agagtgttaacgtgcctgcaggcacctttcgttccac 24576691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 263 - 413
Target Start/End: Original strand, 3459455 - 3459604
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaa-acttcttacacaatcttactcaattccattactgacttgagcg 361  Q
    ||||||||||||||||||||||||||||| |||||| ||   |  |||||||| || ||||  |||||| |||| |||| ||||||||||||||||||||    
T  3459455 cgcctatataagggtgaacttgcttcacc-tcaaggtacgatttacttttcaccaacactttctacacactcttgctcagttccattactgacttgagcg 3459553  T
Q  362 tcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcat 413  Q
     ||||||||||||||||||||| ||||||||||  ||||| |||||||||||    
T  3459554 ccggagtgctaacgtgcctgcaggcacctttcg-cccaccgcgaagactcat 3459604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 267 - 401
Target Start/End: Original strand, 4565368 - 4565502
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    |||||||||||||||||||||||||||||||| ||||| | |||||||||| |||||||| ||  |||   ||| || ||||||| ||||||  ||||||    
T  4565368 tatataagggtgaacttgcttcaccctcaaggtacacaacacttttcacaacacttcttatactttctctttcagtttcattactaacttgattgtcgga 4565467  T
Q  367 gtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||||||| ||||||||  ||||||||||||||||    
T  4565468 gtgctaacatgcctgcagacacctttcgttccacc 4565502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 264 - 422
Target Start/End: Complemental strand, 18323062 - 18322904
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    |||||||||||||||| ||||||||| |||||| | |    || |||||||||| | ||  ||||||||||| |||| ||| |||||||||||||||||     
T  18323062 gcctatataagggtgaccttgcttcatcctcaatgtatgattcacttttcacaacattttctacacaatctttctcagttctattactgacttgagcgtt 18322963  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||||| |||| || |||||||||||||| |||||||| ||||||||| || |||||||    
T  18322962 ggagtgttaacatgtctgcatgcaccttttgttccaccgcgaagactcgtcaccgccgt 18322904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 265 - 445
Target Start/End: Complemental strand, 21416856 - 21416676
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||| |||||||||||||||||||||| |||| ||   ||  ||||||||| ||||  |||||| |||| |||| || ||||||||||||||||||||    
T  21416856 cctatacaagggtgaacttgcttcacccttaaggtacgattcatttttcacaacactttctacacactctttctcagtttcattactgacttgagcgtcg 21416757  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    ||||||||||| || ||||  ||||||  | |||| | |||| ||||| |||||||||   | ||||||||||||||||||    
T  21416756 gagtgctaacgagcatgcagacaccttcagatccatcgcgaatactcaacgccgccgtactgaaagccattaccgtcacac 21416676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 337 - 415
Target Start/End: Complemental strand, 15058081 - 15058003
Alignment:
Q  337 ctcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcg 415  Q
    ||||||| ||||||| ||||| |||| | |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  15058081 ctcaatttcattactaacttgtgcgttgtagtgctaacgtgcctgcatgcacctttcgttccaccacaaagactcatcg 15058003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 171 - 423
Target Start/End: Original strand, 11776132 - 11776366
Alignment:
Q  171 tcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaacacttcttacacgtcgcctata 270  Q
    ||||||| ||||||||||||| ||||| |||||| ||| |||||||||| ||||| | |||| |||||||||| ||||| |           | ||||||    
T  11776132 tcatgtagggatcaccctacatgtgtcatgctccatccttaatcacacgccgcattatccggagacggttatgcccaacgc----------gcacctata 11776221  T
Q  271 taagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgc 370  Q
    ||| |||||||||| ||||||||||||| ||| ||| |||||| ||| ||| |||| ||| |||| |||| |||||        ||||||||||||||||    
T  11776222 taaaggtgaacttgtttcaccctcaaggtacatatcacttttcccaacactccttaaacactctttctcagttcca--------ttgagcgtcggagtgc 11776313  T
Q  371 taacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtg 423  Q
    |||||||||||||  || ||||||| ||||| | || ||||||| ||| ||||    
T  11776314 taacgtgcctgcaaacatctttcgtcccaccgcaaatactcatctccgtcgtg 11776366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 417
Target Start/End: Original strand, 17927749 - 17927829
Alignment:
Q  337 ctcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
    |||| ||||||||||||||| ||||| ||||||||||||||| |||||||||||||||| ||||||| |||| ||||||||    
T  17927749 ctcagttccattactgacttaagcgttggagtgctaacgtgcatgcatgcacctttcgtcccaccacaaagagtcatcgcc 17927829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 332 - 418
Target Start/End: Original strand, 17319659 - 17319748
Alignment:
Q  332 tcttactcaattccattactgacttgagcgtcggagtgct---aacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccg 418  Q
    |||| |||| ||||||||||||||||| | || |||||||   ||| |||||||||||||||||||||||||||||||||||||||||||    
T  17319659 tctttctcagttccattactgacttgaacatcagagtgctgctaacatgcctgcatgcacctttcgttccaccacgaagactcatcgccg 17319748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 417
Target Start/End: Original strand, 26916869 - 26917023
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||| ||  ||||||||  ||||||| |    || |||||||||| ||||  |||||| |||  |||| |||||||||||||||||||||    
T  26916869 cgcctatataagggcgacattgcttcatgctcaaggtatgactcacttttcacaacactttctacacactctctctcagttccattactgacttgagcgt 26916968  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgcc 417  Q
      | | ||||||||||||  ||||||||||||||||| ||||||||||| |||||    
T  26916969 tagtgcgctaacgtgcctaaatgcacctttcgttccatcacgaagactcgtcgcc 26917023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 337 - 401
Target Start/End: Original strand, 14666884 - 14666948
Alignment:
Q  337 ctcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||| |||||||| ||||||||    
T  14666884 ctcaattccattattgacttgatcgtcggagtgctaacgtgcctgcaggcaccttttgttccacc 14666948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 263 - 413
Target Start/End: Complemental strand, 30477761 - 30477611
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||||||||||  || |||||||||||||| |    || |||||||||| ||||  |||||| |||| |||| || | ||||||||||||||||    
T  30477761 cgcctatataagggtgacattacttcaccctcaaggtatgattcacttttcacaacactttctacacactctttctcagtttcgttactgacttgagcgt 30477662  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcat 413  Q
     ||||||||||||||| ||||  || |||||||  |||| ||||| |||||    
T  30477661 tggagtgctaacgtgcatgcagacatctttcgtctcaccgcgaagtctcat 30477611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 265 - 422
Target Start/End: Complemental strand, 24507575 - 24507418
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||| |||||||| | |||||||||||||| |    || |||||||||| ||||  || ||| |||| |||| |||||||| |||||||| ||| |    
T  24507575 cctatatatgggtgaacctacttcaccctcaaggtatgattcacttttcacaacactttctagacactctttctcatttccattattgacttgatcgttg 24507476  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||| ||||||||| ||||  ||||||||| |||||| | |||||||||  |||||||    
T  24507475 gagtactaacgtgcatgcagacacctttcgctccaccgcaaagactcattaccgccgt 24507418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 267 - 330
Target Start/End: Complemental strand, 23243900 - 23243837
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacaca 330  Q
    |||||||| ||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||    
T  23243900 tatataagagtgaacttgcttcaccctcaagatacacatcacttttcacaacacttcttacaca 23243837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 359 - 437
Target Start/End: Complemental strand, 20055603 - 20055525
Alignment:
Q  359 gcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattac 437  Q
    |||||||||| ||||||||||||||  |||| ||||||||||| |||||| |||||||||||||  |||||||| ||||    
T  20055603 gcgtcggagtactaacgtgcctgcagacacccttcgttccaccgcgaagattcatcgccgccgtaccggaagccgttac 20055525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 303 - 417
Target Start/End: Original strand, 24677598 - 24677712
Alignment:
Q  303 catcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacca 402  Q
    ||||||||| ||||| |||||||||||  |||  |||| ||||| ||||||||||||| | ||||||||||| ||| ||||  |||| |||||| ||||     
T  24677598 catccctttccacaacacttcttacactttctctctcagttccaatactgacttgagcattggagtgctaacatgcttgcagccacccttcgtttcaccg 24677697  T
Q  403 cgaagactcatcgcc 417  Q
     ||||||||||||||    
T  24677698 tgaagactcatcgcc 24677712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 325 - 422
Target Start/End: Complemental strand, 23269304 - 23269207
Alignment:
Q  325 tacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||||| ||||  ||| ||||||||||||||| || || ||||||||||| |||||| |  |||||||||||||||| | ||||||||||||| ||||    
T  23269304 tacacactctttatcagttccattactgacttaagtgttggagtgctaacttgcctgtagacacctttcgttccaccgcaaagactcatcgccaccgt 23269207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 326 - 400
Target Start/End: Original strand, 1909742 - 1909816
Alignment:
Q  326 acacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccac 400  Q
    ||||| |||| |||| || |||||||||||| ||||| | | |||||||||| ||||||||||||||||||||||    
T  1909742 acacactctttctcagtttcattactgactttagcgttgaaatgctaacgtgtctgcatgcacctttcgttccac 1909816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 324
Target Start/End: Complemental strand, 20055683 - 20055623
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttct 324  Q
    ||||||||||||| ||||||||||||||||| |||| ||||||| |||||||||| ||||||    
T  20055683 cgcctatataaggatgaacttgcttcaccct-aaggtacacatcacttttcacaacacttct 20055623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 395
Target Start/End: Complemental strand, 13754877 - 13754746
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||| ||||  | ||||||||||||||| |    || |||| ||||| ||||  |||||| |||| |||| || |||||||||||||||||      
T  13754877 gcctatataagagtgacttagcttcaccctcaaggtaggattcactttacacaacactttctacacactctttctcagtttcattactgacttgagcgat 13754778  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgt 395  Q
    | |||| ||||||||| ||| |||||||||||    
T  13754777 gtagtgttaacgtgccagcaggcacctttcgt 13754746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 342 - 411
Target Start/End: Complemental strand, 5859856 - 5859787
Alignment:
Q  342 ttccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactc 411  Q
    |||||||| |||||||||||| |||||||||||||| ||||| | | ||||||| |||| |||| |||||    
T  5859856 ttccattattgacttgagcgttggagtgctaacgtgtctgcaggaatctttcgtcccactacgaggactc 5859787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 181 - 250
Target Start/End: Complemental strand, 24071019 - 24070950
Alignment:
Q  181 atcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttatggccaaca 250  Q
    |||||| ||| |||||| | ||||||||||||||||||| ||||||||||   |||||||||| ||||||    
T  24071019 atcaccgtacgcgtgtccttctccgtccctaatcacacgccgcataacccatagacggttatgaccaaca 24070950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 394
Target Start/End: Original strand, 17698256 - 17698387
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||| |||||  |||||||||||||||| | | |  || |||||||||| ||||  |||||| |||| |||  ||||||||||||||||   ||    
T  17698256 cgcctatatatgggtggccttgcttcaccctcaaagtataattcacttttcacaacactttctacacactctttctcggttccattactgacttgcatgt 17698355  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcg 394  Q
     ||| ||||||||| || |||  |||||||||    
T  17698356 tggaatgctaacgtacccgcagacacctttcg 17698387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 297
Target Start/End: Complemental strand, 16214747 - 16214713
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaag 297  Q
    ||||||||||||||||||||||||||||| |||||    
T  16214747 cgcctatataagggtgaacttgcttcaccttcaag 16214713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 376
Target Start/End: Original strand, 6928069 - 6928174
Alignment:
Q  271 taagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgc 370  Q
    |||||||||| ||  ||||||||||||| |    || |||||||||| ||||  |||||| |||| |||| |||||||||||||||||| || | | |||    
T  6928069 taagggtgaaattaattcaccctcaaggtatgattcacttttcacaacactttctacacactctttctcagttccattactgacttgagtgttgaaatgc 6928168  T
Q  371 taacgt 376  Q
    ||||||    
T  6928169 taacgt 6928174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 263 - 414
Target Start/End: Complemental strand, 40916 - 40765
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||| ||||||||||||||||||||||||||| ||||||| ||||||| || ||||| |||||  |||   ||| |||||| ||||||||||||||    
T  40916 cgcctataaaagggtgaacttgcttcaccctcaaggtacacatcacttttcataacacttcctacactctctctttcagttccatcactgacttgagcgt 40817  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
     ||||||||||||||||||||||| |||||||||| |||||  |||||||||    
T  40816 tggagtgctaacgtgcctgcatgcgcctttcgttctaccacagagactcatc 40765  T

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Target: scaffold0013 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 264 - 403
Target Start/End: Original strand, 4396 - 4535
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||||||||||||||||||||||||||| |||||||  |||||| || |||||||||||  |||   ||| || ||||| ||||||||||||     
T  4396 gcctatataagggtgaacttgcttcaccctcaaggtacacatcatttttcataacacttcttacactctctctttcagtttcattagtgacttgagcgtt 4495  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccac 403  Q
    ||||||||||||||| ||||  ||||||||||||||||||    
T  4496 ggagtgctaacgtgcttgcagacacctttcgttccaccac 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 70; Significance: 2e-31; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 263 - 375
Target Start/End: Original strand, 213 - 326
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacaca-tcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcg 361  Q
    |||||| ||||||||||||||||||||||||||||| |||   || |||||||||| |||||||||||| |||| |||| ||||||||||||||||||||    
T  213 cgcctagataagggtgaacttgcttcaccctcaaggtacattctcacttttcacaacacttcttacacactctttctcagttccattactgacttgagcg 312  T
Q  362 tcggagtgctaacg 375  Q
    ||||||||||||||    
T  313 tcggagtgctaacg 326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 266 - 397
Target Start/End: Complemental strand, 215389 - 215258
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    |||||||||| |||||||||||||||||||||| ||||| | |||||||||| |||||||||||| |||   ||| || |||||||||||||||||| ||    
T  215389 ctatataaggatgaacttgcttcaccctcaaggtacacaacacttttcacaacacttcttacacactctctttcagtttcattactgacttgagcgttgg 215290  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttc 397  Q
    | ||||||||||||||||  || |||||||||    
T  215289 attgctaacgtgcctgcagacaactttcgttc 215258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 265 - 445
Target Start/End: Complemental strand, 5156 - 4978
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    ||||||||||||||||||||||||||||||||||  ||| || |||||||||| ||||||||||||| ||| ||||      ||| |||| |||| ||||    
T  5156 cctatataagggtgaacttgcttcaccctcaaggttcacgtcacttttcacaacacttcttacacaacctttctca-----gttaatgacgtgagtgtcg 5062  T
Q  365 gagtgctaacgtg---cctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||| ||||||||     || | ||||||||||||||||| ||||||||| ||||| ||||| |||||||| |||| |||||||    
T  5061 gagttctaacgtggttgttgtaggcacctttcgttccacctcgaagactcttcgccaccgtgccggaagcctttactgtcacac 4978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 143 - 243
Target Start/End: Complemental strand, 5268 - 5168
Alignment:
Q  143 atgcaccgtgccacacaggacctcgccctcatgtaaggatcaccctacacgtgtcttgctccgtccctaatcacacgtcgcataacccggggacggttat 242  Q
    ||||||||||||||||||||   |||||||  |  || |||||| |||| ||||| | ||||||||| ||||||||| ||||||| |||  |||||||||    
T  5268 atgcaccgtgccacacaggagtgcgccctcgcgcgagaatcaccttacatgtgtcctactccgtcccaaatcacacgccgcataagccgaagacggttat 5169  T
Q  243 g 243  Q
    |    
T  5168 g 5168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 263 - 400
Target Start/End: Complemental strand, 6418 - 6281
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    ||||||||||||| |||||||||||||| ||||||| ||   || |||||||||| ||||  |||||| | || |||| ||||||||||||||||||| |    
T  6418 cgcctatataaggatgaacttgcttcacgctcaaggtacgactcacttttcacaacactttctacacactatttctcagttccattactgacttgagctt 6319  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccac 400  Q
    || ||||||||||||||||||  ||||||| |||||||    
T  6318 cgaagtgctaacgtgcctgcaaacaccttttgttccac 6281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 267 - 445
Target Start/End: Complemental strand, 11628 - 11454
Alignment:
Q  267 tatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgga 366  Q
    |||||||||||||||||| |||||||||||||  |||||| |||||||||| |||| |   ||| |||| |||| |||||||| |||  ||||||| |||    
T  11628 tatataagggtgaacttggttcaccctcaaggt-cacatcacttttcacaacacttat---acactctttctcagttccattaatgaggtgagcgttgga 11533  T
Q  367 gtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||||||| ||  || | ||||| |||||||||||  |||||||| ||||||||||| | |||||| ||||||||||||    
T  11532 gtgctaacatggttgtaggcaccattcgttccaccttgaagactcttcgccgccgtgccagaagcctttaccgtcacac 11454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 61; Significance: 5e-26; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 309 - 445
Target Start/End: Complemental strand, 35327 - 35191
Alignment:
Q  309 ttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaaga 408  Q
    ||||||||| ||||   ||||| |||| |||| |||| ||||||||||||| ||| ||||||||||||||||||| |||| ||||||| ||| |||||||    
T  35327 ttttcacaacactttccacacactctttctcagttccgttactgacttgagtgtcagagtgctaacgtgcctgcaagcacatttcgttgcactacgaaga 35228  T
Q  409 ctcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    |||| |||||||||  |||||||| ||||| ||||||    
T  35227 ctcaacgccgccgtaccggaagccgttaccatcacac 35191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 59; Significance: 8e-25; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 308 - 422
Target Start/End: Complemental strand, 7960 - 7846
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaag 407  Q
    |||||||||| ||||  |||||| |||| ||||||| ||||||||| ||||||||  |||||||||||||||| |||||||||||| |||||||  ||||    
T  7960 cttttcacaacactttctacacactctttctcaattgcattactgatttgagcgttagagtgctaacgtgcctacatgcacctttccttccaccgtgaag 7861  T
Q  408 actcatcgccgccgt 422  Q
    |||||||||| ||||    
T  7860 actcatcgccaccgt 7846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 266 - 439
Target Start/End: Original strand, 21592 - 21765
Alignment:
Q  266 ctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcgg 365  Q
    |||| |||||||||| ||||||||||||||||| ||||||| |||| ||||| |||||||| ||| |||   ||| || || |||||||||||| || ||    
T  21592 ctatgtaagggtgaatttgcttcaccctcaaggtacacatcactttccacaacacttcttaaacactctctttcagtttcaatactgacttgagtgttgg 21691  T
Q  366 agtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccg 439  Q
    |||||||||||||| ||| ||||  ||||||||||  |  ||||||||||||| |||  |||||| | ||||||    
T  21692 agtgctaacgtgcccgcaggcacacttcgttccactgcagagactcatcgccgtcgtaccggaagtcgttaccg 21765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 265 - 422
Target Start/End: Complemental strand, 14040 - 13885
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    ||||||||||||||| |||||||||||||||||| |    || ||| |||||| ||||  |||||| |||| |||| || |||||||||||||||| | |    
T  14040 cctatataagggtgatcttgcttcaccctcaaggtatgattcacttctcacaacactttctacacactctttctcagtttcattactgacttgagctttg 13941  T
Q  365 gagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||| ||||||||| | |||||||||||||| ||||| ||  |||||||| |||||||    
T  13940 gagtactaacgtgcattcatgcacctttcgtcccaccgcg--gactcatcaccgccgt 13885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 264 - 401
Target Start/End: Complemental strand, 42367 - 42231
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||||||||||||||||||||||||||| ||||| | |||||||||| |||| | | ||  |  || ||| |||||||| |||||||| ||||    
T  42367 gcctatataagggtgaacttgcttcaccctcaaggtacacaacacttttcacaacacttataatacttttcta-tcagttccattattgacttgatcgtc 42269  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    | |||||||| |||||||||  ||||||||||| ||||    
T  42268 gaagtgctaatgtgcctgcagccacctttcgtttcacc 42231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 265 - 377
Target Start/End: Original strand, 15403 - 15515
Alignment:
Q  265 cctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcg 364  Q
    |||||||||||||||||||||||||||||||||| |    || |||||||||| ||||  || | | |||| |||| |||||||||||||| ||||||||    
T  15403 cctatataagggtgaacttgcttcaccctcaaggtatgattcacttttcacaacactttctagatactctttctcagttccattactgactggagcgtcg 15502  T
Q  365 gagtgctaacgtg 377  Q
    |||||||||||||    
T  15503 gagtgctaacgtg 15515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 308 - 422
Target Start/End: Original strand, 8593 - 8706
Alignment:
Q  308 cttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaag 407  Q
    |||||||||| ||||  |||||| | ||  ||| || |||||||||||||||||||| |||||||||||| |||||  |||||||  ||||||| | |||    
T  8593 cttttcacaacactttctacacactgtttttcagtttcattactgacttgagcgtcgaagtgctaacgtg-ctgcaaacaccttttattccaccgcaaag 8691  T
Q  408 actcatcgccgccgt 422  Q
    ||||| |||||||||    
T  8692 actcaacgccgccgt 8706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 413
Target Start/End: Original strand, 20468 - 20618
Alignment:
Q  263 cgcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgt 362  Q
    |||||||||| ||||||| ||  ||||||| ||||| ||||||| ||||||| || | ||  |||||| |||| |||| |||| ||| ||||||||||||    
T  20468 cgcctatatatgggtgaatttatttcacccacaaggtacacatcacttttcataacattttctacacactctttctcagttcctttagtgacttgagcgt 20567  T
Q  363 cggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcat 413  Q
    | |||||||||| ||  || | ||||||||||||||||| ||||| |||||    
T  20568 cagagtgctaacatgtttgtaagcacctttcgttccaccgcgaagcctcat 20618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 414
Target Start/End: Original strand, 10758 - 10840
Alignment:
Q  332 tcttactcaattccattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||| |||| ||||||||||||||||| ||||||||||||||| ||||| ||  |||||||| ||||||||||||||||||||    
T  10758 tctttctcagttccattactgacttgaacgtcggagtgctaacatgcctacagacacctttcattccaccacgaagactcatc 10840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 345 - 414
Target Start/End: Original strand, 29329 - 29398
Alignment:
Q  345 cattactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatc 414  Q
    |||||||||||||||||| ||||||||||| || || |||||||||||||||||||| ||||||||||||    
T  29329 cattactgacttgagcgttggagtgctaacatgactccatgcacctttcgttccaccgcgaagactcatc 29398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 264 - 429
Target Start/End: Original strand, 95782 - 95946
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    ||||||||||||||||  |||||||||||| |||| |    || |||||||||| ||||  ||| || |||| |||| |||||||||| ||||||||||     
T  95782 gcctatataagggtgacgttgcttcaccctgaaggtatgattcacttttcacaacactttctacgcactctttctcagttccattactaacttgagcgtt 95881  T
Q  364 ggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaa 429  Q
    | |||| ||||||||||||| | |||||| || ||||| |||| | ||||| |||| |||||||||    
T  95882 gaagtggtaacgtgcctgcaggaaccttttgtcccaccgcgaa-aatcatcaccgctgtgtcggaa 95946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 444
Target Start/End: Complemental strand, 9093 - 8910
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttact----caattccattactgacttgag 359  Q
    |||||||||||||||||| | || ||||||||||| ||||||   ||||||||| |||||||||| | | ||  |    || |||||||||  |||||||    
T  9093 gcctatataagggtgaaccttctccaccctcaaggtacacataatttttcacaacacttcttacaaacttttttttgtccagttccattacatacttgag 8994  T
Q  360 cgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcaca 444  Q
    ||| |||||||||||||| ||||| ||||| |||||||||| || || |||||||| ||  |   |||||| |||||||||||||    
T  8993 cgttggagtgctaacgtgtctgcaggcacc-ttcgttccactacaaatactcatcgtcgtggcaccggaagtcattaccgtcaca 8910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 264 - 384
Target Start/End: Original strand, 68774 - 68892
Alignment:
Q  264 gcctatataagggtgaacttgcttcaccctcaagggacacatcccttttcacaaaacttcttacacaatcttactcaattccattactgacttgagcgtc 363  Q
    |||||||||||||||| |||||||| ||||||||| |    || |||||||||| ||||  || ||  |||| |||| |||||||||| ||||||||||     
T  68774 gcctatataagggtgaccttgcttctccctcaaggtatgattcacttttcacaacactttctatac--tctttctcagttccattactaacttgagcgtt 68871  T
Q  364 ggagtgctaacgtgcctgcat 384  Q
    |||||||||||||| ||||||    
T  68872 ggagtgctaacgtgtctgcat 68892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 69281 - 69333
Alignment:
Q  349 actgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccacc 401  Q
    |||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  69281 actgacttgagcgttggagtgctaacgtgcctgcaggcaccttttgttccacc 69333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 348 - 422
Target Start/End: Original strand, 18526 - 18600
Alignment:
Q  348 tactgacttgagcgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgt 422  Q
    |||||||||||| || |||||||||| ||| ||||| | || ||||||| ||||  |||||||||||||| ||||    
T  18526 tactgacttgagtgttggagtgctaaagtgtctgcaggaacatttcgtttcaccgtgaagactcatcgccaccgt 18600  T

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Target: scaffold0438 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0438
Description:

Target: scaffold0438; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 360 - 445
Target Start/End: Complemental strand, 4402 - 4321
Alignment:
Q  360 cgtcggagtgctaacgtgcctgcatgcacctttcgttccaccacgaagactcatcgccgccgtgtcggaagccattaccgtcacac 445  Q
    ||||||| |||||||||||| ||| |||| |||| |||||||  ||||||||||    |||||| |||||||  ||||||||||||    
T  4402 cgtcggattgctaacgtgcccgcacgcacatttcattccaccgtgaagactcat----gccgtgccggaagctgttaccgtcacac 4321  T

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