View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11147_high_7 (Length: 250)
Name: NF11147_high_7
Description: NF11147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11147_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 43029255 - 43029469
Alignment:
| Q |
20 |
caaatttgcctattttagaaaacagtgctacttcaacatggatccttaatccattttctgatcatgaaactgaaaccattagggatcacaagaaattgaa |
119 |
Q |
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| T |
43029255 |
caaatttgcctattttagaaaacagtgctacttcaacatggatccttaatccattttctgatcatgaaactgaaaccattagggatcacaagaaattgaa |
43029354 |
T |
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| Q |
120 |
aagatcaaccgtaactatccctatttggtttgctaatttcagcagccatagtaatagtttcttcaataacatcaacagcaataacaacagtgtgaatagc |
219 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43029355 |
aagatcaaccgtaactatccctatttggtttgctaatttcagcagccatagtaatagtttcttcaataacatcaacagcaataacaacagtgtgaatagc |
43029454 |
T |
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| Q |
220 |
attccaaggcttcat |
234 |
Q |
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||||||||||||||| |
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| T |
43029455 |
attccaaggcttcat |
43029469 |
T |
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