View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11147_low_3 (Length: 362)

Name: NF11147_low_3
Description: NF11147
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11147_low_3
NF11147_low_3
[»] chr5 (21 HSPs)
chr5 (329-362)||(40004418-40004451)
chr5 (330-362)||(186367-186399)
chr5 (330-362)||(22527688-22527720)
chr5 (331-362)||(34662201-34662232)
chr5 (332-362)||(6673237-6673267)
chr5 (331-361)||(13661129-13661159)
chr5 (332-362)||(14913646-14913676)
chr5 (332-362)||(16440929-16440959)
chr5 (332-362)||(26894882-26894912)
chr5 (333-362)||(9020693-9020722)
chr5 (331-360)||(15190826-15190855)
chr5 (333-362)||(16127258-16127287)
chr5 (332-361)||(32147292-32147321)
chr5 (328-361)||(32964127-32964160)
chr5 (334-362)||(1265949-1265977)
chr5 (334-362)||(7951562-7951590)
chr5 (334-362)||(9828393-9828421)
chr5 (334-362)||(9828662-9828690)
chr5 (334-362)||(10734532-10734560)
chr5 (326-362)||(20186493-20186529)
chr5 (330-362)||(26889589-26889621)
[»] chr8 (29 HSPs)
chr8 (330-362)||(29279465-29279497)
chr8 (331-362)||(17856785-17856816)
chr8 (327-362)||(18754137-18754172)
chr8 (332-362)||(26016567-26016597)
chr8 (332-362)||(40530415-40530445)
chr8 (329-362)||(2152249-2152282)
chr8 (333-362)||(8251942-8251971)
chr8 (333-362)||(13153927-13153956)
chr8 (333-362)||(28572045-28572074)
chr8 (333-362)||(28579638-28579667)
chr8 (329-362)||(28965736-28965769)
chr8 (333-362)||(32675766-32675795)
chr8 (333-362)||(34568489-34568518)
chr8 (332-361)||(40741534-40741563)
chr8 (333-362)||(44250858-44250887)
chr8 (334-362)||(51104-51132)
chr8 (334-362)||(1774342-1774370)
chr8 (334-362)||(2944281-2944309)
chr8 (330-362)||(5593417-5593449)
chr8 (334-362)||(8951437-8951465)
chr8 (334-362)||(11798874-11798902)
chr8 (334-362)||(13154197-13154225)
chr8 (334-362)||(18455720-18455748)
chr8 (333-361)||(26990566-26990594)
chr8 (334-362)||(28192184-28192212)
chr8 (334-362)||(29279195-29279223)
chr8 (334-362)||(39029178-39029206)
chr8 (334-362)||(42885054-42885082)
chr8 (334-362)||(43653943-43653971)
[»] chr7 (22 HSPs)
chr7 (330-362)||(28060986-28061018)
chr7 (330-362)||(36698140-36698172)
chr7 (331-362)||(29286046-29286077)
chr7 (330-361)||(44547422-44547453)
chr7 (332-362)||(20075116-20075146)
chr7 (332-362)||(38858296-38858326)
chr7 (330-359)||(29177264-29177293)
chr7 (333-362)||(32814432-32814461)
chr7 (333-362)||(33858875-33858904)
chr7 (333-362)||(39871622-39871651)
chr7 (334-362)||(19920563-19920591)
chr7 (334-362)||(21295151-21295179)
chr7 (334-362)||(26255096-26255124)
chr7 (330-362)||(27813492-27813524)
chr7 (334-362)||(32872384-32872412)
chr7 (332-360)||(34979088-34979116)
chr7 (334-362)||(38428416-38428444)
chr7 (334-362)||(39197718-39197746)
chr7 (334-362)||(40300230-40300258)
chr7 (334-362)||(41026105-41026133)
chr7 (334-362)||(41252370-41252398)
chr7 (334-362)||(48521029-48521057)
[»] chr6 (15 HSPs)
chr6 (330-362)||(30248643-30248675)
chr6 (332-362)||(4844398-4844428)
chr6 (331-361)||(5457409-5457439)
chr6 (332-362)||(34741735-34741765)
chr6 (333-362)||(12144047-12144076)
chr6 (334-362)||(231114-231142)
chr6 (334-362)||(8743188-8743216)
chr6 (334-362)||(9038642-9038670)
chr6 (334-362)||(9388529-9388557)
chr6 (333-361)||(9388801-9388829)
chr6 (334-362)||(11847841-11847869)
chr6 (326-362)||(16272977-16273013)
chr6 (333-361)||(23397878-23397906)
chr6 (334-362)||(23398148-23398176)
chr6 (334-362)||(34301841-34301869)
[»] chr4 (26 HSPs)
chr4 (326-362)||(20747439-20747475)
chr4 (327-359)||(24754071-24754103)
chr4 (331-362)||(4035822-4035853)
chr4 (324-362)||(4036094-4036132)
chr4 (333-362)||(45742815-45742844)
chr4 (334-362)||(4549629-4549657)
chr4 (334-362)||(5375566-5375594)
chr4 (288-332)||(5581678-5581722)
chr4 (334-362)||(5743668-5743696)
chr4 (334-362)||(9328249-9328277)
chr4 (334-362)||(20391446-20391474)
chr4 (330-362)||(20455190-20455222)
chr4 (330-362)||(21265216-21265248)
chr4 (334-362)||(25708420-25708448)
chr4 (334-362)||(26626011-26626039)
chr4 (334-362)||(29014064-29014092)
chr4 (334-362)||(30771528-30771556)
chr4 (334-362)||(32033002-32033030)
chr4 (334-362)||(33413518-33413546)
chr4 (334-362)||(34273228-34273256)
chr4 (334-362)||(35675929-35675957)
chr4 (334-362)||(44294789-44294817)
chr4 (334-362)||(47806860-47806888)
chr4 (334-362)||(52977982-52978010)
chr4 (334-362)||(53277194-53277222)
chr4 (334-362)||(55631999-55632027)
[»] chr2 (27 HSPs)
chr2 (330-362)||(20252206-20252238)
chr2 (331-362)||(41450513-41450544)
chr2 (326-360)||(1360062-1360096)
chr2 (328-362)||(11201677-11201711)
chr2 (332-362)||(16108213-16108243)
chr2 (328-362)||(22182933-22182967)
chr2 (332-362)||(34062674-34062704)
chr2 (332-362)||(39833737-39833767)
chr2 (333-362)||(34883857-34883886)
chr2 (333-362)||(40607701-40607730)
chr2 (330-362)||(2199974-2200006)
chr2 (334-362)||(2438225-2438253)
chr2 (334-362)||(2438494-2438522)
chr2 (330-362)||(4711724-4711756)
chr2 (333-361)||(5664637-5664665)
chr2 (334-362)||(7491844-7491872)
chr2 (334-362)||(7492113-7492141)
chr2 (334-362)||(8716901-8716929)
chr2 (327-359)||(8990197-8990229)
chr2 (334-362)||(17408303-17408331)
chr2 (334-362)||(22897660-22897688)
chr2 (332-360)||(23789240-23789268)
chr2 (333-361)||(25624732-25624760)
chr2 (334-362)||(27560206-27560234)
chr2 (334-362)||(34113795-34113823)
chr2 (334-362)||(36131037-36131065)
chr2 (334-362)||(45474351-45474379)
[»] chr1 (32 HSPs)
chr1 (330-362)||(1047988-1048020)
chr1 (331-362)||(4102723-4102754)
chr1 (332-362)||(39362932-39362962)
chr1 (332-362)||(39750119-39750149)
chr1 (332-362)||(52431183-52431213)
chr1 (332-362)||(52601989-52602019)
chr1 (333-362)||(8104297-8104326)
chr1 (333-362)||(9202244-9202273)
chr1 (333-362)||(11741396-11741425)
chr1 (326-359)||(22567058-22567091)
chr1 (333-362)||(37951958-37951987)
chr1 (333-362)||(38920238-38920267)
chr1 (333-362)||(39497432-39497461)
chr1 (333-362)||(45039411-45039440)
chr1 (334-362)||(943646-943674)
chr1 (334-362)||(1039390-1039418)
chr1 (334-362)||(1046296-1046324)
chr1 (334-362)||(15811241-15811269)
chr1 (334-362)||(16456636-16456664)
chr1 (334-362)||(23541979-23542007)
chr1 (334-362)||(23542248-23542276)
chr1 (334-362)||(30290265-30290293)
chr1 (334-362)||(36694854-36694882)
chr1 (334-362)||(36710955-36710983)
chr1 (334-362)||(39363203-39363231)
chr1 (334-362)||(39497702-39497730)
chr1 (334-362)||(44646540-44646568)
chr1 (334-362)||(44649629-44649657)
chr1 (334-362)||(44649898-44649926)
chr1 (334-362)||(46075876-46075904)
chr1 (334-362)||(49907021-49907049)
chr1 (331-359)||(50008495-50008523)
[»] scaffold0029 (1 HSPs)
scaffold0029 (331-362)||(51691-51722)
[»] chr3 (40 HSPs)
chr3 (331-362)||(43868100-43868131)
chr3 (325-356)||(43978434-43978465)
chr3 (331-361)||(23700795-23700825)
chr3 (331-361)||(23719250-23719280)
chr3 (331-361)||(23737706-23737736)
chr3 (333-362)||(7181349-7181378)
chr3 (333-362)||(12050401-12050430)
chr3 (333-362)||(14428878-14428907)
chr3 (333-362)||(20862466-20862495)
chr3 (333-362)||(22103938-22103967)
chr3 (333-362)||(25149131-25149160)
chr3 (331-360)||(26221285-26221314)
chr3 (333-362)||(26806114-26806143)
chr3 (330-359)||(32963117-32963146)
chr3 (333-362)||(33868717-33868746)
chr3 (333-362)||(35868092-35868121)
chr3 (333-362)||(37728712-37728741)
chr3 (333-362)||(44543781-44543810)
chr3 (333-362)||(50647683-50647712)
chr3 (333-362)||(51284071-51284100)
chr3 (331-360)||(53271862-53271891)
chr3 (334-362)||(4024052-4024080)
chr3 (334-362)||(4024320-4024348)
chr3 (334-362)||(7251291-7251319)
chr3 (334-362)||(9499506-9499534)
chr3 (334-362)||(9779979-9780007)
chr3 (331-359)||(10044839-10044867)
chr3 (334-362)||(10220933-10220961)
chr3 (334-362)||(14428610-14428638)
chr3 (334-362)||(16434977-16435005)
chr3 (334-362)||(21756486-21756514)
chr3 (330-362)||(22832616-22832648)
chr3 (334-362)||(26593774-26593802)
chr3 (334-362)||(31531420-31531448)
chr3 (331-359)||(33868445-33868473)
chr3 (334-362)||(36005773-36005801)
chr3 (334-362)||(45252773-45252801)
chr3 (334-362)||(46049995-46050023)
chr3 (334-362)||(52058985-52059013)
chr3 (333-361)||(53361865-53361893)
[»] scaffold0122 (1 HSPs)
scaffold0122 (332-362)||(12063-12093)
[»] scaffold0012 (1 HSPs)
scaffold0012 (332-362)||(47638-47668)
[»] scaffold0002 (1 HSPs)
scaffold0002 (332-362)||(355340-355370)
[»] scaffold0008 (1 HSPs)
scaffold0008 (333-362)||(259131-259160)
[»] scaffold0604 (1 HSPs)
scaffold0604 (334-362)||(3791-3819)
[»] scaffold0047 (1 HSPs)
scaffold0047 (329-361)||(61861-61893)
[»] scaffold0025 (2 HSPs)
scaffold0025 (334-362)||(65378-65406)
scaffold0025 (333-361)||(65647-65675)


Alignment Details
Target: chr5 (Bit Score: 34; Significance: 0.0000000005; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 40004451 - 40004418
Alignment:
Q  329 ttatatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||||    
T  40004451 ttatatactccctccgtccctaattataagaccc 40004418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 186399 - 186367
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||||    
T  186399 tatatactccctccgtccctaattataagaccc 186367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 22527688 - 22527720
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||||    
T  22527688 tatatactccctccgtccctaattataagaccc 22527720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 34662201 - 34662232
Alignment:
Q  331 atatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||    
T  34662201 atatactccctccgtccctaattataagaccc 34662232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 6673267 - 6673237
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  6673267 tatactccctccgtccctaattataagaccc 6673237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 13661159 - 13661129
Alignment:
Q  331 atatactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||||    
T  13661159 atatactccctccgtccctaattataagacc 13661129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 14913646 - 14913676
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  14913646 tatactccctccgtccctaattataagaccc 14913676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 16440929 - 16440959
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  16440929 tatactccctccgtccctaattataagaccc 16440959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 26894912 - 26894882
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  26894912 tatactccctccgtccctaattataagaccc 26894882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 9020693 - 9020722
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  9020693 atactccctccgtccctaattataagaccc 9020722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Complemental strand, 15190855 - 15190826
Alignment:
Q  331 atatactccctccgtccctaattataagac 360  Q
    ||||||||||||||||||||||||||||||    
T  15190855 atatactccctccgtccctaattataagac 15190826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 16127258 - 16127287
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  16127258 atactccctccgtccctaattataagaccc 16127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 361
Target Start/End: Original strand, 32147292 - 32147321
Alignment:
Q  332 tatactccctccgtccctaattataagacc 361  Q
    ||||||||||||||||||||||||||||||    
T  32147292 tatactccctccgtccctaattataagacc 32147321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 328 - 361
Target Start/End: Original strand, 32964127 - 32964160
Alignment:
Q  328 attatatactccctccgtccctaattataagacc 361  Q
    |||||||||| |||||||||||||||||||||||    
T  32964127 attatatactacctccgtccctaattataagacc 32964160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 1265949 - 1265977
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  1265949 tactccctccgtccctaattataagaccc 1265977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 7951562 - 7951590
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  7951562 tactccctccgtccctaattataagaccc 7951590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 9828393 - 9828421
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  9828393 tactccctccgtccctaattataagaccc 9828421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 9828690 - 9828662
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  9828690 tactccctccgtccctaattataagaccc 9828662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 10734560 - 10734532
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  10734560 tactccctccgtccctaattataagaccc 10734532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Original strand, 20186493 - 20186529
Alignment:
Q  326 aaattatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||| | ||||||||||||||||||||||    
T  20186493 aaattatatactacatccgtccctaattataagaccc 20186529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 26889589 - 26889621
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||| |||||    
T  26889589 tatatactccctccgtccctaattataggaccc 26889621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 29279497 - 29279465
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||||    
T  29279497 tatatactccctccgtccctaattataagaccc 29279465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 17856816 - 17856785
Alignment:
Q  331 atatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||    
T  17856816 atatactccctccgtccctaattataagaccc 17856785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 327 - 362
Target Start/End: Original strand, 18754137 - 18754172
Alignment:
Q  327 aattatatactccctccgtccctaattataagaccc 362  Q
    |||| |||||||||||||||||||||||||||||||    
T  18754137 aattttatactccctccgtccctaattataagaccc 18754172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 26016567 - 26016597
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  26016567 tatactccctccgtccctaattataagaccc 26016597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 40530445 - 40530415
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  40530445 tatactccctccgtccctaattataagaccc 40530415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 2152282 - 2152249
Alignment:
Q  329 ttatatactccctccgtccctaattataagaccc 362  Q
    ||||||||| ||||||||||||||||||||||||    
T  2152282 ttatatactacctccgtccctaattataagaccc 2152249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 8251971 - 8251942
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  8251971 atactccctccgtccctaattataagaccc 8251942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 13153927 - 13153956
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  13153927 atactccctccgtccctaattataagaccc 13153956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 28572045 - 28572074
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  28572045 atactccctccgtccctaattataagaccc 28572074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 28579638 - 28579667
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  28579638 atactccctccgtccctaattataagaccc 28579667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 28965769 - 28965736
Alignment:
Q  329 ttatatactccctccgtccctaattataagaccc 362  Q
    |||||||||| |||||||||||||||||||||||    
T  28965769 ttatatactctctccgtccctaattataagaccc 28965736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 32675795 - 32675766
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  32675795 atactccctccgtccctaattataagaccc 32675766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 34568489 - 34568518
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  34568489 atactccctccgtccctaattataagaccc 34568518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 361
Target Start/End: Complemental strand, 40741563 - 40741534
Alignment:
Q  332 tatactccctccgtccctaattataagacc 361  Q
    ||||||||||||||||||||||||||||||    
T  40741563 tatactccctccgtccctaattataagacc 40741534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 44250858 - 44250887
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  44250858 atactccctccgtccctaattataagaccc 44250887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 51132 - 51104
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  51132 tactccctccgtccctaattataagaccc 51104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 1774342 - 1774370
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  1774342 tactccctccgtccctaattataagaccc 1774370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 2944309 - 2944281
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  2944309 tactccctccgtccctaattataagaccc 2944281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 5593417 - 5593449
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||| ||||||||||||||||||||||    
T  5593417 tatatactccttccgtccctaattataagaccc 5593449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 8951465 - 8951437
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  8951465 tactccctccgtccctaattataagaccc 8951437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 11798902 - 11798874
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  11798902 tactccctccgtccctaattataagaccc 11798874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 13154225 - 13154197
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  13154225 tactccctccgtccctaattataagaccc 13154197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 18455720 - 18455748
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  18455720 tactccctccgtccctaattataagaccc 18455748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 361
Target Start/End: Original strand, 26990566 - 26990594
Alignment:
Q  333 atactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||    
T  26990566 atactccctccgtccctaattataagacc 26990594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 28192212 - 28192184
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  28192212 tactccctccgtccctaattataagaccc 28192184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 29279195 - 29279223
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  29279195 tactccctccgtccctaattataagaccc 29279223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 39029178 - 39029206
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  39029178 tactccctccgtccctaattataagaccc 39029206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 42885054 - 42885082
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  42885054 tactccctccgtccctaattataagaccc 42885082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 43653943 - 43653971
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  43653943 tactccctccgtccctaattataagaccc 43653971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000002; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 28061018 - 28060986
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||||    
T  28061018 tatatactccctccgtccctaattataagaccc 28060986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 36698172 - 36698140
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||||    
T  36698172 tatatactccctccgtccctaattataagaccc 36698140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 29286077 - 29286046
Alignment:
Q  331 atatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||    
T  29286077 atatactccctccgtccctaattataagaccc 29286046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 330 - 361
Target Start/End: Original strand, 44547422 - 44547453
Alignment:
Q  330 tatatactccctccgtccctaattataagacc 361  Q
    ||||||||||||||||||||||||||||||||    
T  44547422 tatatactccctccgtccctaattataagacc 44547453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 20075146 - 20075116
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  20075146 tatactccctccgtccctaattataagaccc 20075116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 38858296 - 38858326
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  38858296 tatactccctccgtccctaattataagaccc 38858326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 359
Target Start/End: Complemental strand, 29177293 - 29177264
Alignment:
Q  330 tatatactccctccgtccctaattataaga 359  Q
    ||||||||||||||||||||||||||||||    
T  29177293 tatatactccctccgtccctaattataaga 29177264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 32814432 - 32814461
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  32814432 atactccctccgtccctaattataagaccc 32814461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 33858904 - 33858875
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  33858904 atactccctccgtccctaattataagaccc 33858875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 39871651 - 39871622
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  39871651 atactccctccgtccctaattataagaccc 39871622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 19920563 - 19920591
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  19920563 tactccctccgtccctaattataagaccc 19920591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 21295151 - 21295179
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  21295151 tactccctccgtccctaattataagaccc 21295179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 26255096 - 26255124
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  26255096 tactccctccgtccctaattataagaccc 26255124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 27813492 - 27813524
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||| ||||||||||||||||||||||||    
T  27813492 tatatactacctccgtccctaattataagaccc 27813524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 32872412 - 32872384
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  32872412 tactccctccgtccctaattataagaccc 32872384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 360
Target Start/End: Complemental strand, 34979116 - 34979088
Alignment:
Q  332 tatactccctccgtccctaattataagac 360  Q
    |||||||||||||||||||||||||||||    
T  34979116 tatactccctccgtccctaattataagac 34979088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 38428444 - 38428416
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  38428444 tactccctccgtccctaattataagaccc 38428416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 39197718 - 39197746
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  39197718 tactccctccgtccctaattataagaccc 39197746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 40300230 - 40300258
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  40300230 tactccctccgtccctaattataagaccc 40300258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 41026133 - 41026105
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  41026133 tactccctccgtccctaattataagaccc 41026105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 41252398 - 41252370
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  41252398 tactccctccgtccctaattataagaccc 41252370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 48521029 - 48521057
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  48521029 tactccctccgtccctaattataagaccc 48521057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 30248643 - 30248675
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||||    
T  30248643 tatatactccctccgtccctaattataagaccc 30248675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 4844398 - 4844428
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  4844398 tatactccctccgtccctaattataagaccc 4844428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Original strand, 5457409 - 5457439
Alignment:
Q  331 atatactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||||    
T  5457409 atatactccctccgtccctaattataagacc 5457439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 34741765 - 34741735
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  34741765 tatactccctccgtccctaattataagaccc 34741735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 12144076 - 12144047
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  12144076 atactccctccgtccctaattataagaccc 12144047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 231142 - 231114
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  231142 tactccctccgtccctaattataagaccc 231114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 8743188 - 8743216
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  8743188 tactccctccgtccctaattataagaccc 8743216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 9038642 - 9038670
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  9038642 tactccctccgtccctaattataagaccc 9038670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 9388529 - 9388557
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  9388529 tactccctccgtccctaattataagaccc 9388557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 361
Target Start/End: Complemental strand, 9388829 - 9388801
Alignment:
Q  333 atactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||    
T  9388829 atactccctccgtccctaattataagacc 9388801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 11847869 - 11847841
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  11847869 tactccctccgtccctaattataagaccc 11847841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 16273013 - 16272977
Alignment:
Q  326 aaattatatactccctccgtccctaattataagaccc 362  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  16273013 aaattaaatacttcctccgtccctaattataagaccc 16272977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 361
Target Start/End: Original strand, 23397878 - 23397906
Alignment:
Q  333 atactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||    
T  23397878 atactccctccgtccctaattataagacc 23397906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 23398176 - 23398148
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  23398176 tactccctccgtccctaattataagaccc 23398148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 34301869 - 34301841
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  34301869 tactccctccgtccctaattataagaccc 34301841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000002; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 362
Target Start/End: Complemental strand, 20747475 - 20747439
Alignment:
Q  326 aaattatatactccctccgtccctaattataagaccc 362  Q
    |||||| ||||||||||||||||||||||||||||||    
T  20747475 aaattaaatactccctccgtccctaattataagaccc 20747439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 24754071 - 24754103
Alignment:
Q  327 aattatatactccctccgtccctaattataaga 359  Q
    |||||||||||||||||||||||||||||||||    
T  24754071 aattatatactccctccgtccctaattataaga 24754103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 4035822 - 4035853
Alignment:
Q  331 atatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||    
T  4035822 atatactccctccgtccctaattataagaccc 4035853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 324 - 362
Target Start/End: Complemental strand, 4036132 - 4036094
Alignment:
Q  324 acaaattatatactccctccgtccctaattataagaccc 362  Q
    |||||| || |||||||||||||||||||||||||||||    
T  4036132 acaaatcatgtactccctccgtccctaattataagaccc 4036094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 45742844 - 45742815
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  45742844 atactccctccgtccctaattataagaccc 45742815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 4549629 - 4549657
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  4549629 tactccctccgtccctaattataagaccc 4549657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 5375594 - 5375566
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  5375594 tactccctccgtccctaattataagaccc 5375566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 288 - 332
Target Start/End: Original strand, 5581678 - 5581722
Alignment:
Q  288 ctcattttcaatagggtaacattttaatctcttcatacaaattat 332  Q
    |||||| ||| | ||||||||||||| ||||||||||||||||||    
T  5581678 ctcattctcattcgggtaacattttattctcttcatacaaattat 5581722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 5743696 - 5743668
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  5743696 tactccctccgtccctaattataagaccc 5743668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 9328277 - 9328249
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  9328277 tactccctccgtccctaattataagaccc 9328249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 20391474 - 20391446
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  20391474 tactccctccgtccctaattataagaccc 20391446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 20455222 - 20455190
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||| ||||||||||||||||||||||||    
T  20455222 tatatactacctccgtccctaattataagaccc 20455190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 21265216 - 21265248
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||| ||||||||||||||||||||||||    
T  21265216 tatatactacctccgtccctaattataagaccc 21265248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 25708420 - 25708448
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  25708420 tactccctccgtccctaattataagaccc 25708448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 26626039 - 26626011
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  26626039 tactccctccgtccctaattataagaccc 26626011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 29014064 - 29014092
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  29014064 tactccctccgtccctaattataagaccc 29014092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 30771528 - 30771556
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  30771528 tactccctccgtccctaattataagaccc 30771556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 32033030 - 32033002
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  32033030 tactccctccgtccctaattataagaccc 32033002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 33413518 - 33413546
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  33413518 tactccctccgtccctaattataagaccc 33413546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 34273256 - 34273228
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  34273256 tactccctccgtccctaattataagaccc 34273228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 35675957 - 35675929
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  35675957 tactccctccgtccctaattataagaccc 35675929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 44294789 - 44294817
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  44294789 tactccctccgtccctaattataagaccc 44294817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 47806860 - 47806888
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  47806860 tactccctccgtccctaattataagaccc 47806888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 52977982 - 52978010
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  52977982 tactccctccgtccctaattataagaccc 52978010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 53277222 - 53277194
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  53277222 tactccctccgtccctaattataagaccc 53277194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 55631999 - 55632027
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  55631999 tactccctccgtccctaattataagaccc 55632027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000002; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 20252206 - 20252238
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||||    
T  20252206 tatatactccctccgtccctaattataagaccc 20252238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 41450513 - 41450544
Alignment:
Q  331 atatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||    
T  41450513 atatactccctccgtccctaattataagaccc 41450544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 360
Target Start/End: Complemental strand, 1360096 - 1360062
Alignment:
Q  326 aaattatatactccctccgtccctaattataagac 360  Q
    ||||| |||||||||||||||||||||||||||||    
T  1360096 aaattttatactccctccgtccctaattataagac 1360062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 11201677 - 11201711
Alignment:
Q  328 attatatactccctccgtccctaattataagaccc 362  Q
    |||| ||||||||||||||||||||||||||||||    
T  11201677 attaaatactccctccgtccctaattataagaccc 11201711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 16108213 - 16108243
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  16108213 tatactccctccgtccctaattataagaccc 16108243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 328 - 362
Target Start/End: Complemental strand, 22182967 - 22182933
Alignment:
Q  328 attatatactccctccgtccctaattataagaccc 362  Q
    |||| ||||||||||||||||||||||||||||||    
T  22182967 attaaatactccctccgtccctaattataagaccc 22182933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 34062704 - 34062674
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  34062704 tatactccctccgtccctaattataagaccc 34062674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 39833737 - 39833767
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  39833737 tatactccctccgtccctaattataagaccc 39833767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 34883886 - 34883857
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  34883886 atactccctccgtccctaattataagaccc 34883857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 40607701 - 40607730
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  40607701 atactccctccgtccctaattataagaccc 40607730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 2199974 - 2200006
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||| ||||||||||||||||||||||||    
T  2199974 tatatactacctccgtccctaattataagaccc 2200006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 2438225 - 2438253
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  2438225 tactccctccgtccctaattataagaccc 2438253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 2438522 - 2438494
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  2438522 tactccctccgtccctaattataagaccc 2438494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 4711724 - 4711756
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||| |||||||    
T  4711724 tatatactccctccgtccctaattaaaagaccc 4711756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 361
Target Start/End: Original strand, 5664637 - 5664665
Alignment:
Q  333 atactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||    
T  5664637 atactccctccgtccctaattataagacc 5664665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 7491844 - 7491872
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  7491844 tactccctccgtccctaattataagaccc 7491872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 7492141 - 7492113
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  7492141 tactccctccgtccctaattataagaccc 7492113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 8716929 - 8716901
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  8716929 tactccctccgtccctaattataagaccc 8716901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 359
Target Start/End: Original strand, 8990197 - 8990229
Alignment:
Q  327 aattatatactccctccgtccctaattataaga 359  Q
    |||| ||||||||||||||||||||||||||||    
T  8990197 aattttatactccctccgtccctaattataaga 8990229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 17408331 - 17408303
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  17408331 tactccctccgtccctaattataagaccc 17408303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 22897688 - 22897660
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  22897688 tactccctccgtccctaattataagaccc 22897660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 332 - 360
Target Start/End: Complemental strand, 23789268 - 23789240
Alignment:
Q  332 tatactccctccgtccctaattataagac 360  Q
    |||||||||||||||||||||||||||||    
T  23789268 tatactccctccgtccctaattataagac 23789240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 361
Target Start/End: Original strand, 25624732 - 25624760
Alignment:
Q  333 atactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||    
T  25624732 atactccctccgtccctaattataagacc 25624760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 27560206 - 27560234
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  27560206 tactccctccgtccctaattataagaccc 27560234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 34113823 - 34113795
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  34113823 tactccctccgtccctaattataagaccc 34113795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 36131065 - 36131037
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  36131065 tactccctccgtccctaattataagaccc 36131037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 45474351 - 45474379
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  45474351 tactccctccgtccctaattataagaccc 45474379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 362
Target Start/End: Original strand, 1047988 - 1048020
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||||    
T  1047988 tatatactccctccgtccctaattataagaccc 1048020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 4102754 - 4102723
Alignment:
Q  331 atatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||    
T  4102754 atatactccctccgtccctaattataagaccc 4102723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 39362932 - 39362962
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  39362932 tatactccctccgtccctaattataagaccc 39362962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 39750119 - 39750149
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  39750119 tatactccctccgtccctaattataagaccc 39750149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 52431213 - 52431183
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  52431213 tatactccctccgtccctaattataagaccc 52431183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 52601989 - 52602019
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  52601989 tatactccctccgtccctaattataagaccc 52602019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 8104326 - 8104297
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  8104326 atactccctccgtccctaattataagaccc 8104297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 9202244 - 9202273
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  9202244 atactccctccgtccctaattataagaccc 9202273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 11741396 - 11741425
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  11741396 atactccctccgtccctaattataagaccc 11741425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 359
Target Start/End: Original strand, 22567058 - 22567091
Alignment:
Q  326 aaattatatactccctccgtccctaattataaga 359  Q
    |||||||||||| |||||||||||||||||||||    
T  22567058 aaattatatactacctccgtccctaattataaga 22567091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 37951987 - 37951958
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  37951987 atactccctccgtccctaattataagaccc 37951958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 38920238 - 38920267
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  38920238 atactccctccgtccctaattataagaccc 38920267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 39497432 - 39497461
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  39497432 atactccctccgtccctaattataagaccc 39497461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 45039411 - 45039440
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  45039411 atactccctccgtccctaattataagaccc 45039440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 943674 - 943646
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  943674 tactccctccgtccctaattataagaccc 943646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 1039418 - 1039390
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  1039418 tactccctccgtccctaattataagaccc 1039390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 1046324 - 1046296
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  1046324 tactccctccgtccctaattataagaccc 1046296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 15811269 - 15811241
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  15811269 tactccctccgtccctaattataagaccc 15811241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 16456636 - 16456664
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  16456636 tactccctccgtccctaattataagaccc 16456664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 23541979 - 23542007
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  23541979 tactccctccgtccctaattataagaccc 23542007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 23542276 - 23542248
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  23542276 tactccctccgtccctaattataagaccc 23542248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 30290265 - 30290293
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  30290265 tactccctccgtccctaattataagaccc 30290293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 36694854 - 36694882
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  36694854 tactccctccgtccctaattataagaccc 36694882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 36710955 - 36710983
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  36710955 tactccctccgtccctaattataagaccc 36710983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 39363231 - 39363203
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  39363231 tactccctccgtccctaattataagaccc 39363203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 39497730 - 39497702
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  39497730 tactccctccgtccctaattataagaccc 39497702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 44646568 - 44646540
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  44646568 tactccctccgtccctaattataagaccc 44646540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 44649629 - 44649657
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  44649629 tactccctccgtccctaattataagaccc 44649657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 44649926 - 44649898
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  44649926 tactccctccgtccctaattataagaccc 44649898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 46075904 - 46075876
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  46075904 tactccctccgtccctaattataagaccc 46075876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 49907021 - 49907049
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  49907021 tactccctccgtccctaattataagaccc 49907049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Complemental strand, 50008523 - 50008495
Alignment:
Q  331 atatactccctccgtccctaattataaga 359  Q
    |||||||||||||||||||||||||||||    
T  50008523 atatactccctccgtccctaattataaga 50008495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 362
Target Start/End: Complemental strand, 51722 - 51691
Alignment:
Q  331 atatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||    
T  51722 atatactccctccgtccctaattataagaccc 51691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 32; Significance: 0.000000008; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 331 - 362
Target Start/End: Original strand, 43868100 - 43868131
Alignment:
Q  331 atatactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||||    
T  43868100 atatactccctccgtccctaattataagaccc 43868131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 356
Target Start/End: Complemental strand, 43978465 - 43978434
Alignment:
Q  325 caaattatatactccctccgtccctaattata 356  Q
    ||||||||||||||||||||||||||||||||    
T  43978465 caaattatatactccctccgtccctaattata 43978434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 23700825 - 23700795
Alignment:
Q  331 atatactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||||    
T  23700825 atatactccctccgtccctaattataagacc 23700795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 23719280 - 23719250
Alignment:
Q  331 atatactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||||    
T  23719280 atatactccctccgtccctaattataagacc 23719250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 331 - 361
Target Start/End: Complemental strand, 23737736 - 23737706
Alignment:
Q  331 atatactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||||    
T  23737736 atatactccctccgtccctaattataagacc 23737706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 7181349 - 7181378
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  7181349 atactccctccgtccctaattataagaccc 7181378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 12050430 - 12050401
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  12050430 atactccctccgtccctaattataagaccc 12050401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 14428907 - 14428878
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  14428907 atactccctccgtccctaattataagaccc 14428878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 20862495 - 20862466
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  20862495 atactccctccgtccctaattataagaccc 20862466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 22103967 - 22103938
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  22103967 atactccctccgtccctaattataagaccc 22103938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 25149160 - 25149131
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  25149160 atactccctccgtccctaattataagaccc 25149131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Original strand, 26221285 - 26221314
Alignment:
Q  331 atatactccctccgtccctaattataagac 360  Q
    ||||||||||||||||||||||||||||||    
T  26221285 atatactccctccgtccctaattataagac 26221314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 26806114 - 26806143
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  26806114 atactccctccgtccctaattataagaccc 26806143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 359
Target Start/End: Complemental strand, 32963146 - 32963117
Alignment:
Q  330 tatatactccctccgtccctaattataaga 359  Q
    ||||||||||||||||||||||||||||||    
T  32963146 tatatactccctccgtccctaattataaga 32963117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 33868746 - 33868717
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  33868746 atactccctccgtccctaattataagaccc 33868717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 35868121 - 35868092
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  35868121 atactccctccgtccctaattataagaccc 35868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 37728712 - 37728741
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  37728712 atactccctccgtccctaattataagaccc 37728741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 44543781 - 44543810
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  44543781 atactccctccgtccctaattataagaccc 44543810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Original strand, 50647683 - 50647712
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  50647683 atactccctccgtccctaattataagaccc 50647712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 51284100 - 51284071
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  51284100 atactccctccgtccctaattataagaccc 51284071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 360
Target Start/End: Complemental strand, 53271891 - 53271862
Alignment:
Q  331 atatactccctccgtccctaattataagac 360  Q
    ||||||||||||||||||||||||||||||    
T  53271891 atatactccctccgtccctaattataagac 53271862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 4024052 - 4024080
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  4024052 tactccctccgtccctaattataagaccc 4024080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 4024348 - 4024320
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  4024348 tactccctccgtccctaattataagaccc 4024320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 7251319 - 7251291
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  7251319 tactccctccgtccctaattataagaccc 7251291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 9499534 - 9499506
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  9499534 tactccctccgtccctaattataagaccc 9499506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 9779979 - 9780007
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  9779979 tactccctccgtccctaattataagaccc 9780007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 10044839 - 10044867
Alignment:
Q  331 atatactccctccgtccctaattataaga 359  Q
    |||||||||||||||||||||||||||||    
T  10044839 atatactccctccgtccctaattataaga 10044867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 10220933 - 10220961
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  10220933 tactccctccgtccctaattataagaccc 10220961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 14428610 - 14428638
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  14428610 tactccctccgtccctaattataagaccc 14428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 16434977 - 16435005
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  16434977 tactccctccgtccctaattataagaccc 16435005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 21756486 - 21756514
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  21756486 tactccctccgtccctaattataagaccc 21756514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 362
Target Start/End: Complemental strand, 22832648 - 22832616
Alignment:
Q  330 tatatactccctccgtccctaattataagaccc 362  Q
    |||||||||| ||||||||||||||||||||||    
T  22832648 tatatactccttccgtccctaattataagaccc 22832616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 26593802 - 26593774
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  26593802 tactccctccgtccctaattataagaccc 26593774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 31531448 - 31531420
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  31531448 tactccctccgtccctaattataagaccc 31531420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 359
Target Start/End: Original strand, 33868445 - 33868473
Alignment:
Q  331 atatactccctccgtccctaattataaga 359  Q
    |||||||||||||||||||||||||||||    
T  33868445 atatactccctccgtccctaattataaga 33868473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 36005801 - 36005773
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  36005801 tactccctccgtccctaattataagaccc 36005773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 45252773 - 45252801
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  45252773 tactccctccgtccctaattataagaccc 45252801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 46050023 - 46049995
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  46050023 tactccctccgtccctaattataagaccc 46049995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 52058985 - 52059013
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  52058985 tactccctccgtccctaattataagaccc 52059013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 361
Target Start/End: Complemental strand, 53361893 - 53361865
Alignment:
Q  333 atactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||    
T  53361893 atactccctccgtccctaattataagacc 53361865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 12063 - 12093
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  12063 tatactccctccgtccctaattataagaccc 12093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Original strand, 47638 - 47668
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  47638 tatactccctccgtccctaattataagaccc 47668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 332 - 362
Target Start/End: Complemental strand, 355370 - 355340
Alignment:
Q  332 tatactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||||    
T  355370 tatactccctccgtccctaattataagaccc 355340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 362
Target Start/End: Complemental strand, 259160 - 259131
Alignment:
Q  333 atactccctccgtccctaattataagaccc 362  Q
    ||||||||||||||||||||||||||||||    
T  259160 atactccctccgtccctaattataagaccc 259131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0604 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Complemental strand, 3819 - 3791
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  3819 tactccctccgtccctaattataagaccc 3791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 61893 - 61861
Alignment:
Q  329 ttatatactccctccgtccctaattataagacc 361  Q
    |||| ||||||||||||||||||||||||||||    
T  61893 ttatgtactccctccgtccctaattataagacc 61861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 29; Significance: 0.0000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 334 - 362
Target Start/End: Original strand, 65378 - 65406
Alignment:
Q  334 tactccctccgtccctaattataagaccc 362  Q
    |||||||||||||||||||||||||||||    
T  65378 tactccctccgtccctaattataagaccc 65406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 361
Target Start/End: Complemental strand, 65675 - 65647
Alignment:
Q  333 atactccctccgtccctaattataagacc 361  Q
    |||||||||||||||||||||||||||||    
T  65675 atactccctccgtccctaattataagacc 65647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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