View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11148_high_24 (Length: 250)
Name: NF11148_high_24
Description: NF11148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11148_high_24 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 35257683 - 35257919
Alignment:
| Q |
1 |
tctagttggcaaaccaatgagtatttccacggtagccatagaatcaaagttaaagttgctggctttgtttgtatggaggaccaaaaacttttttcatatc |
100 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35257683 |
tctagttggcaaaccaatcagtatttccacggtagccatagaatcaaagttaaagttgctggctttgtttgtatggaggaccaaaaacttttttcatatc |
35257782 |
T |
|
| Q |
101 |
ttcaaacgaatacacttattaagataaacaatttaacccttatgcaaacacatgctacggtagttaaaagactaatatgaagtaaactgggatattgcat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
35257783 |
ttcaaacgaatacacttattaagataaacaatttaacccttatgcaaacacatgctacgatagttaaaagactaatatgaagtaaactgggatattgcat |
35257882 |
T |
|
| Q |
201 |
gttacagtatcggctaaccatgtcatacgtatagtct |
237 |
Q |
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||||||||||||||||| |||||||||||||||||| |
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| T |
35257883 |
attacagtatcggctaactatgtcatacgtatagtct |
35257919 |
T |
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