View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11148_high_4 (Length: 472)

Name: NF11148_high_4
Description: NF11148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11148_high_4
NF11148_high_4
[»] chr3 (68 HSPs)
chr3 (18-448)||(1901961-1902392)
chr3 (18-448)||(1911407-1911838)
chr3 (142-399)||(35864077-35864334)
chr3 (84-348)||(21984209-21984474)
chr3 (165-315)||(11027175-11027325)
chr3 (156-357)||(7729708-7729908)
chr3 (76-386)||(10480326-10480639)
chr3 (190-327)||(31339880-31340017)
chr3 (112-283)||(54393254-54393428)
chr3 (132-274)||(52259689-52259831)
chr3 (18-71)||(1894916-1894969)
chr3 (18-71)||(1904362-1904415)
chr3 (18-71)||(2933861-2933914)
chr3 (304-401)||(44441778-44441875)
chr3 (76-174)||(44441600-44441699)
chr3 (171-289)||(49600729-49600847)
chr3 (171-274)||(34962274-34962377)
chr3 (412-448)||(7867746-7867782)
chr3 (412-448)||(14957836-14957872)
chr3 (412-448)||(18169157-18169193)
chr3 (412-448)||(20380924-20380960)
chr3 (412-448)||(38944176-38944212)
chr3 (412-448)||(48945847-48945883)
chr3 (412-448)||(51464307-51464343)
chr3 (412-442)||(29800590-29800620)
chr3 (412-446)||(35272027-35272061)
chr3 (412-445)||(108431-108464)
chr3 (412-445)||(5398918-5398951)
chr3 (412-445)||(12792638-12792671)
chr3 (412-445)||(20215948-20215981)
chr3 (415-448)||(31997816-31997849)
chr3 (412-445)||(34607958-34607991)
chr3 (415-448)||(34733326-34733359)
chr3 (171-232)||(44111249-44111310)
chr3 (412-445)||(45205288-45205321)
chr3 (412-448)||(462436-462472)
chr3 (412-448)||(1295332-1295368)
chr3 (412-448)||(3069609-3069645)
chr3 (412-448)||(3483132-3483168)
chr3 (412-448)||(7294135-7294171)
chr3 (412-448)||(8254027-8254063)
chr3 (412-448)||(9027873-9027909)
chr3 (412-448)||(11173458-11173494)
chr3 (412-448)||(11327108-11327144)
chr3 (412-448)||(20714243-20714279)
chr3 (412-448)||(22813072-22813108)
chr3 (412-448)||(24537219-24537255)
chr3 (412-448)||(26279884-26279920)
chr3 (412-448)||(28300683-28300719)
chr3 (412-448)||(30400191-30400227)
chr3 (412-448)||(30796649-30796685)
chr3 (412-448)||(32457790-32457826)
chr3 (412-448)||(32931953-32931989)
chr3 (412-448)||(34271525-34271561)
chr3 (412-448)||(36818956-36818992)
chr3 (412-444)||(41877650-41877682)
chr3 (412-448)||(43169777-43169813)
chr3 (412-448)||(44855251-44855287)
chr3 (412-448)||(45528977-45529013)
chr3 (412-448)||(46315990-46316026)
chr3 (412-448)||(46473128-46473164)
chr3 (412-448)||(47683801-47683837)
chr3 (412-448)||(48405410-48405446)
chr3 (412-448)||(49196696-49196732)
chr3 (412-448)||(50294147-50294183)
chr3 (412-448)||(50559247-50559283)
chr3 (412-448)||(50879595-50879631)
chr3 (412-448)||(51672863-51672899)
[»] chr2 (40 HSPs)
chr2 (112-396)||(28528939-28529223)
chr2 (156-399)||(44718840-44719081)
chr2 (200-332)||(42530893-42531033)
chr2 (304-403)||(42071527-42071626)
chr2 (156-228)||(42071417-42071489)
chr2 (412-447)||(21490703-21490738)
chr2 (129-250)||(21490265-21490384)
chr2 (412-448)||(4738607-4738643)
chr2 (412-448)||(5067681-5067717)
chr2 (412-448)||(14140372-14140408)
chr2 (412-448)||(30856807-30856843)
chr2 (412-448)||(31629604-31629640)
chr2 (412-448)||(33296106-33296142)
chr2 (412-448)||(36435681-36435717)
chr2 (412-447)||(42283275-42283310)
chr2 (171-248)||(7813549-7813624)
chr2 (176-289)||(947379-947492)
chr2 (412-445)||(5167780-5167813)
chr2 (412-445)||(6365186-6365219)
chr2 (412-445)||(15283288-15283321)
chr2 (412-445)||(36132974-36133007)
chr2 (412-445)||(41040266-41040299)
chr2 (412-448)||(3091741-3091777)
chr2 (412-448)||(4036911-4036947)
chr2 (412-448)||(6884910-6884946)
chr2 (412-448)||(8482256-8482292)
chr2 (412-448)||(11229356-11229392)
chr2 (412-448)||(14891113-14891149)
chr2 (412-448)||(22303203-22303239)
chr2 (412-448)||(24727625-24727661)
chr2 (412-448)||(25507255-25507291)
chr2 (412-448)||(25801837-25801873)
chr2 (412-448)||(29795447-29795483)
chr2 (412-448)||(29893610-29893646)
chr2 (412-448)||(30487504-30487540)
chr2 (412-448)||(36909878-36909914)
chr2 (412-448)||(37966367-37966403)
chr2 (412-448)||(43725216-43725252)
chr2 (412-448)||(44189827-44189863)
chr2 (412-448)||(45376256-45376292)
[»] chr6 (25 HSPs)
chr6 (115-387)||(6822518-6822790)
chr6 (258-401)||(11769760-11769903)
chr6 (178-355)||(18250755-18250933)
chr6 (134-233)||(33106823-33106920)
chr6 (285-401)||(33106707-33106823)
chr6 (134-289)||(6901536-6901697)
chr6 (412-448)||(12441538-12441574)
chr6 (412-448)||(27334858-27334894)
chr6 (412-448)||(27395598-27395634)
chr6 (412-448)||(32457287-32457323)
chr6 (413-448)||(6435037-6435072)
chr6 (415-448)||(28549045-28549078)
chr6 (412-445)||(30796113-30796146)
chr6 (412-448)||(1897697-1897733)
chr6 (412-448)||(2056783-2056819)
chr6 (412-448)||(3339534-3339570)
chr6 (412-448)||(9954548-9954584)
chr6 (412-448)||(10521126-10521162)
chr6 (412-448)||(12177577-12177613)
chr6 (412-448)||(29383557-29383593)
chr6 (412-448)||(31517204-31517240)
chr6 (412-448)||(31883339-31883375)
chr6 (412-448)||(32149500-32149536)
chr6 (412-448)||(32644623-32644659)
chr6 (412-448)||(33527435-33527471)
[»] chr5 (52 HSPs)
chr5 (76-401)||(15810665-15810991)
chr5 (76-401)||(15726821-15727146)
chr5 (84-348)||(29368448-29368713)
chr5 (185-387)||(4930660-4930861)
chr5 (76-229)||(22399404-22399557)
chr5 (412-448)||(125092-125128)
chr5 (175-225)||(17229004-17229054)
chr5 (271-313)||(38351726-38351768)
chr5 (271-332)||(17228914-17228975)
chr5 (412-448)||(1774318-1774354)
chr5 (412-448)||(6865811-6865847)
chr5 (412-448)||(19127124-19127160)
chr5 (412-448)||(23991169-23991205)
chr5 (164-208)||(27343174-27343218)
chr5 (412-448)||(28811429-28811465)
chr5 (416-448)||(29227721-29227753)
chr5 (412-448)||(34381012-34381048)
chr5 (412-448)||(36713213-36713249)
chr5 (412-448)||(39595272-39595308)
chr5 (412-447)||(14508193-14508228)
chr5 (414-448)||(12910786-12910820)
chr5 (156-198)||(40909995-40910037)
chr5 (415-448)||(4098626-4098659)
chr5 (415-448)||(33567247-33567280)
chr5 (412-448)||(3263543-3263579)
chr5 (412-448)||(4800537-4800573)
chr5 (412-448)||(4954466-4954502)
chr5 (412-448)||(5130402-5130438)
chr5 (412-448)||(8728616-8728652)
chr5 (412-448)||(8959160-8959196)
chr5 (412-448)||(9594478-9594514)
chr5 (412-448)||(9599763-9599799)
chr5 (412-448)||(11768025-11768061)
chr5 (412-448)||(12718415-12718451)
chr5 (412-448)||(12779641-12779677)
chr5 (412-448)||(13734384-13734420)
chr5 (412-448)||(14780456-14780492)
chr5 (412-448)||(14914372-14914408)
chr5 (412-448)||(15918025-15918061)
chr5 (412-448)||(16143390-16143426)
chr5 (412-448)||(19376167-19376203)
chr5 (412-448)||(28903991-28904027)
chr5 (412-448)||(28940386-28940422)
chr5 (412-448)||(29803225-29803261)
chr5 (412-448)||(30574412-30574448)
chr5 (412-448)||(30838400-30838436)
chr5 (412-448)||(34428160-34428196)
chr5 (412-448)||(36572691-36572727)
chr5 (412-448)||(40223820-40223856)
chr5 (412-448)||(41621963-41621999)
chr5 (412-448)||(42699057-42699093)
chr5 (412-448)||(43057435-43057471)
[»] chr8 (43 HSPs)
chr8 (124-332)||(40381594-40381802)
chr8 (89-318)||(42163974-42164204)
chr8 (80-360)||(3310494-3310775)
chr8 (200-401)||(14539388-14539589)
chr8 (112-327)||(37728356-37728571)
chr8 (76-167)||(1336109-1336201)
chr8 (171-243)||(2537200-2537272)
chr8 (134-289)||(12585655-12585810)
chr8 (304-387)||(1336280-1336363)
chr8 (76-238)||(16340159-16340319)
chr8 (412-445)||(6004944-6004977)
chr8 (412-448)||(1796496-1796532)
chr8 (412-448)||(5502371-5502407)
chr8 (412-448)||(12732842-12732878)
chr8 (412-448)||(22852874-22852910)
chr8 (412-448)||(28927681-28927717)
chr8 (412-448)||(36497661-36497697)
chr8 (412-448)||(45101396-45101432)
chr8 (176-278)||(15356060-15356162)
chr8 (415-448)||(11138910-11138943)
chr8 (415-448)||(27836183-27836216)
chr8 (412-445)||(42047335-42047368)
chr8 (412-445)||(43419879-43419912)
chr8 (412-448)||(1065417-1065453)
chr8 (412-448)||(1370309-1370345)
chr8 (412-448)||(5740809-5740845)
chr8 (412-448)||(7596926-7596962)
chr8 (412-448)||(7678732-7678768)
chr8 (412-448)||(8143244-8143280)
chr8 (412-448)||(9047094-9047130)
chr8 (412-448)||(13267121-13267157)
chr8 (412-448)||(20288533-20288569)
chr8 (412-448)||(21075162-21075198)
chr8 (412-448)||(21273745-21273781)
chr8 (412-448)||(26629145-26629181)
chr8 (412-448)||(30170764-30170800)
chr8 (412-448)||(37524452-37524488)
chr8 (412-448)||(37562176-37562212)
chr8 (412-448)||(38844825-38844861)
chr8 (365-401)||(40381827-40381863)
chr8 (412-448)||(40413373-40413409)
chr8 (412-448)||(40842014-40842050)
chr8 (412-448)||(41746820-41746856)
[»] chr1 (54 HSPs)
chr1 (76-387)||(27850394-27850707)
chr1 (120-350)||(30294091-30294321)
chr1 (173-397)||(21487306-21487530)
chr1 (143-250)||(37244915-37245022)
chr1 (76-174)||(46396620-46396719)
chr1 (304-401)||(46396444-46396541)
chr1 (214-285)||(5200333-5200404)
chr1 (298-401)||(42773370-42773473)
chr1 (76-177)||(1282175-1282277)
chr1 (76-177)||(1283206-1283308)
chr1 (171-231)||(29095842-29095902)
chr1 (298-387)||(37245038-37245128)
chr1 (412-446)||(10384211-10384245)
chr1 (201-238)||(42772340-42772377)
chr1 (412-448)||(5309075-5309111)
chr1 (412-448)||(6829818-6829854)
chr1 (412-448)||(7503470-7503506)
chr1 (412-448)||(8391362-8391398)
chr1 (412-448)||(18610773-18610809)
chr1 (412-448)||(29293959-29293995)
chr1 (412-448)||(32821635-32821671)
chr1 (412-448)||(37843467-37843503)
chr1 (412-448)||(45740579-45740615)
chr1 (412-448)||(49425738-49425774)
chr1 (412-448)||(49453491-49453527)
chr1 (412-448)||(50226914-50226950)
chr1 (223-290)||(42772392-42772459)
chr1 (412-446)||(25302680-25302714)
chr1 (210-283)||(1282281-1282354)
chr1 (304-401)||(1282356-1282452)
chr1 (210-283)||(1283312-1283385)
chr1 (304-401)||(1283387-1283483)
chr1 (415-448)||(5477187-5477220)
chr1 (413-446)||(9882696-9882729)
chr1 (412-445)||(31427995-31428028)
chr1 (171-252)||(31570500-31570581)
chr1 (412-448)||(7078535-7078571)
chr1 (412-448)||(8934631-8934667)
chr1 (412-448)||(9011645-9011681)
chr1 (412-448)||(13813558-13813594)
chr1 (412-448)||(15061845-15061881)
chr1 (412-448)||(16658438-16658474)
chr1 (412-448)||(25098823-25098859)
chr1 (412-448)||(26585208-26585244)
chr1 (412-448)||(27687543-27687579)
chr1 (412-448)||(29264015-29264051)
chr1 (413-445)||(32966268-32966300)
chr1 (412-448)||(40596078-40596114)
chr1 (412-448)||(40612114-40612150)
chr1 (412-448)||(41507218-41507254)
chr1 (412-448)||(42256460-42256496)
chr1 (412-448)||(45272184-45272220)
chr1 (412-448)||(48872379-48872415)
chr1 (412-448)||(48872985-48873021)
[»] chr7 (38 HSPs)
chr7 (85-401)||(23756472-23756791)
chr7 (134-289)||(22972847-22973002)
chr7 (171-288)||(33758395-33758512)
chr7 (412-448)||(2469703-2469739)
chr7 (412-448)||(22330655-22330691)
chr7 (412-444)||(27778079-27778111)
chr7 (412-448)||(37352014-37352050)
chr7 (412-448)||(41077535-41077571)
chr7 (412-448)||(45607024-45607060)
chr7 (412-447)||(37832450-37832485)
chr7 (414-448)||(28596908-28596942)
chr7 (414-448)||(32154571-32154605)
chr7 (176-233)||(33338293-33338348)
chr7 (336-390)||(46232378-46232432)
chr7 (415-448)||(23680062-23680095)
chr7 (412-445)||(31982057-31982090)
chr7 (412-445)||(41966332-41966365)
chr7 (412-448)||(156017-156053)
chr7 (412-448)||(1814342-1814378)
chr7 (412-448)||(2347094-2347130)
chr7 (412-448)||(4971290-4971326)
chr7 (412-448)||(7212702-7212738)
chr7 (412-448)||(10591155-10591191)
chr7 (412-448)||(19426580-19426616)
chr7 (412-448)||(25887594-25887630)
chr7 (412-448)||(26153646-26153682)
chr7 (412-448)||(27688648-27688684)
chr7 (412-448)||(28109957-28109993)
chr7 (412-448)||(28824503-28824539)
chr7 (412-448)||(30864452-30864488)
chr7 (412-448)||(31274564-31274600)
chr7 (412-448)||(33050183-33050219)
chr7 (412-448)||(37856189-37856225)
chr7 (412-448)||(40693563-40693599)
chr7 (412-448)||(43444635-43444671)
chr7 (412-448)||(48395248-48395284)
chr7 (412-448)||(48866965-48867001)
chr7 (412-448)||(49069249-49069285)
[»] chr4 (70 HSPs)
chr4 (182-401)||(13035532-13035747)
chr4 (112-387)||(22087635-22087913)
chr4 (79-283)||(47551993-47552200)
chr4 (171-274)||(46732653-46732755)
chr4 (132-278)||(27907223-27907367)
chr4 (80-174)||(26333241-26333336)
chr4 (258-322)||(35747008-35747072)
chr4 (304-398)||(47551897-47551991)
chr4 (76-289)||(13028605-13028815)
chr4 (412-448)||(51039151-51039187)
chr4 (172-255)||(24368009-24368092)
chr4 (412-448)||(4896535-4896571)
chr4 (412-448)||(6370980-6371016)
chr4 (412-448)||(11064124-11064160)
chr4 (412-448)||(11997685-11997721)
chr4 (412-448)||(15596396-15596432)
chr4 (412-448)||(22257231-22257267)
chr4 (412-448)||(26885291-26885327)
chr4 (412-448)||(33093139-33093175)
chr4 (412-448)||(34116575-34116611)
chr4 (412-448)||(35017153-35017189)
chr4 (412-448)||(37547065-37547101)
chr4 (412-448)||(41119505-41119541)
chr4 (412-448)||(46173550-46173586)
chr4 (412-448)||(47014939-47014975)
chr4 (303-401)||(13028978-13029076)
chr4 (412-445)||(940297-940330)
chr4 (173-239)||(6495746-6495814)
chr4 (412-445)||(12638825-12638858)
chr4 (412-445)||(26440676-26440709)
chr4 (415-448)||(48326555-48326588)
chr4 (412-448)||(169537-169573)
chr4 (412-448)||(1031755-1031791)
chr4 (412-448)||(1796366-1796402)
chr4 (412-448)||(5208362-5208398)
chr4 (412-448)||(6290462-6290498)
chr4 (412-448)||(6953423-6953459)
chr4 (412-448)||(7037519-7037555)
chr4 (412-448)||(8455861-8455897)
chr4 (412-448)||(23347775-23347811)
chr4 (412-448)||(27001444-27001480)
chr4 (412-448)||(30042134-30042170)
chr4 (412-448)||(30973597-30973633)
chr4 (412-448)||(31240648-31240684)
chr4 (412-448)||(32365691-32365727)
chr4 (412-448)||(33278675-33278711)
chr4 (412-448)||(38864771-38864807)
chr4 (412-448)||(39010172-39010208)
chr4 (412-448)||(39241325-39241361)
chr4 (412-444)||(40409205-40409237)
chr4 (412-448)||(41262653-41262689)
chr4 (412-448)||(41495013-41495049)
chr4 (412-448)||(42490920-42490956)
chr4 (412-448)||(42815404-42815440)
chr4 (412-448)||(42853939-42853975)
chr4 (412-448)||(44272845-44272881)
chr4 (412-448)||(46566929-46566965)
chr4 (412-448)||(46794536-46794572)
chr4 (412-448)||(48099811-48099847)
chr4 (412-448)||(50831791-50831827)
chr4 (412-448)||(51318703-51318739)
chr4 (412-448)||(51359825-51359861)
chr4 (412-448)||(51377328-51377364)
chr4 (412-448)||(51389109-51389145)
chr4 (412-448)||(51717317-51717353)
chr4 (412-448)||(52392260-52392296)
chr4 (412-448)||(54036553-54036589)
chr4 (412-448)||(54800998-54801034)
chr4 (412-448)||(55268036-55268072)
chr4 (412-448)||(56215605-56215641)
[»] scaffold0245 (3 HSPs)
scaffold0245 (76-177)||(7855-7957)
scaffold0245 (210-283)||(7961-8034)
scaffold0245 (304-401)||(8036-8132)
[»] scaffold0229 (3 HSPs)
scaffold0229 (76-177)||(8183-8285)
scaffold0229 (210-283)||(8289-8362)
scaffold0229 (304-401)||(8364-8460)
[»] scaffold0662 (1 HSPs)
scaffold0662 (412-448)||(1078-1114)
[»] scaffold0508 (1 HSPs)
scaffold0508 (412-448)||(11571-11607)
[»] scaffold0154 (1 HSPs)
scaffold0154 (412-448)||(19726-19762)
[»] scaffold0026 (1 HSPs)
scaffold0026 (412-448)||(113625-113661)
[»] scaffold0011 (1 HSPs)
scaffold0011 (412-448)||(219699-219735)
[»] scaffold0002 (1 HSPs)
scaffold0002 (412-448)||(440718-440754)
[»] scaffold0131 (1 HSPs)
scaffold0131 (413-448)||(15569-15604)
[»] scaffold0018 (1 HSPs)
scaffold0018 (412-442)||(36002-36032)


Alignment Details
Target: chr3 (Bit Score: 376; Significance: 0; HSPs: 68)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 18 - 448
Target Start/End: Complemental strand, 1902392 - 1901961
Alignment:
Q  18 agtttttgtgtgcataatcatatatatcatggcatgaactatgtttgatattaacagagacggatccaggatttttgaatagtgggtgcac-atttataa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || |||||    
T  1902392 agtttttgtgtgcataatcatatatatcatggcatgaactatgttggatattaacagagaaggatccaggatttttgaatagtgggtgcaccatatataa 1902293  T
Q  117 aaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1902292 aaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctat 1902193  T
Q  217 ataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1902192 ataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatg 1902093  T
Q  317 atgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatactattnnnnnnnngagaa 416  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||    
T  1902092 atgatatgtgtagaccaaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatactattaaaaaaaagagaa 1901993  T
Q  417 atgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||| |||||||||||||||    
T  1901992 atgatatttgtacaaccactttgtgacaactt 1901961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 18 - 448
Target Start/End: Complemental strand, 1911838 - 1911407
Alignment:
Q  18 agtttttgtgtgcataatcatatatatcatggcatgaactatgtttgatattaacagagacggatccaggatttttgaatagtgggtgcac-atttataa 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| || |||||    
T  1911838 agtttttgtgtgcataatcatatatatcatggcatgaactatgttggatattaacagagaaggatccaggatttttgaatagtgggtgcaccatatataa 1911739  T
Q  117 aaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1911738 aaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctat 1911639  T
Q  217 ataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1911638 ataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatg 1911539  T
Q  317 atgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatactattnnnnnnnngagaa 416  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||    
T  1911538 atgatatgtgtagaccaaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatactattaaaaaaaagagaa 1911439  T
Q  417 atgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||| |||||||||||||||    
T  1911438 atgatatttgtacaaccactttgtgacaactt 1911407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 142 - 399
Target Start/End: Complemental strand, 35864334 - 35864077
Alignment:
Q  142 tttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaa-tatctttctctatataaataactaaacaatgatttaa 240  Q
    ||||||||||||| ||||||||||||||  ||||||||| | |||||||||| ||| || || |||||||||||||||||| ||||||||||| ||||||    
T  35864334 tttatgatttttcatattatggaaactttcaatgatttttttattttcaata-caaggagaagtatctttctctatataaacaactaaacaatcatttaa 35864236  T
Q  241 ccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagaga 340  Q
    || ||||||| |||||  ||||||||| | | ||||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||    
T  35864235 ccgatcatctctcattcaatttcgcattcaaatcttgataaaattcatattatcaagaaagaatttgagatatatgatgatatgtgtaggccaaaagaga 35864136  T
Q  341 aatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatac 399  Q
    |||||||| ||||||||| |||| ||||| | |||||||||||||||||| ||||||||    
T  35864135 aatgatttgtgataagtgagggcaatgtggtaaaaatatcaactattagtacattatac 35864077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 84 - 348
Target Start/End: Complemental strand, 21984474 - 21984209
Alignment:
Q  84 caggatttttgaatagtgggtgca-catttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttct 182  Q
    |||||||||||| || |||| ||| ||| ||||||||||| ||||| ||||||||||||| ||  ||||||| |||||| ||||||| ||||| ||||||    
T  21984474 caggatttttgattattgggggcatcatatataaaaatttgtagcattaataattgtcctctagaatttttcatattattgaaactttgaatggttttct 21984375  T
Q  183 cattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataat 282  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||   |||||| |||||||| |||||||  |||| ||||  | ||||| |||||||||||    
T  21984374 cattttcaatatcaataaaagtatatttctttatataaataatcgaacaatcatttaaccgatcatctcacattcgattatgtatccggttcttgataat 21984275  T
Q  283 attcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgattt 348  Q
    ||||||||| | || |||||||||||||||||||||||||| |||  ||| | |||||||||||||    
T  21984274 attcatattatcaataaagaatttgagatatatgatgatatatgtgagccaagagagaaatgattt 21984209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 165 - 315
Target Start/End: Complemental strand, 11027325 - 11027175
Alignment:
Q  165 aacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcg 264  Q
    ||||| |||||||||| ||||||||||||||||| |||||||||| | ||||||||||||||||| ||| |||||| || |||||| ||||| ||||||     
T  11027325 aactttgaatgattttatcattttcaatatcaataaaaatatcttacactatataaataactaaataattatttaagcagtcatctctcattcgatttca 11027226  T
Q  265 catccgattcttgataatattcatatttttaagaaagaatttgagatatat 315  Q
    ||| ||||||||||||||||||||||| | |||||| || |||||||||||    
T  11027225 cattcgattcttgataatattcatattatgaagaaaaaagttgagatatat 11027175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 156 - 357
Target Start/End: Complemental strand, 7729908 - 7729708
Alignment:
Q  156 tattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcat 255  Q
    ||||||||||| || ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||| |||||||| |||||||     ||||  ||     
T  7729908 tattatggaaattttgaatgattt-ctcattttcaatatcaataaaaatatatttctctatataaataattaaacaatcatttaacttgatatctcccac 7729810  T
Q  256 ttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataa 355  Q
    | ||||| |||| | ||||||||||||||||||||| | ||||||  | ||||| |||||||||||| |||| | || | |||||||| |||| ||||||    
T  7729809 tcgattttgcattctattcttgataatattcatattatcaagaaatgaattgagctatatgatgataggtgtggcccaagagagaaataatttgtgataa 7729710  T
Q  356 gt 357  Q
    ||    
T  7729709 gt 7729708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 76 - 386
Target Start/End: Original strand, 10480326 - 10480639
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcc-tattatggaaacttagaa 173  Q
    ||||||| || ||||||||||||||||  |||| || |||||||||||  |  | ||||||||  | | |||||||||| | | ||||| |||||| |||    
T  10480326 gacggattcatgatttttgaatagtggaggcaccatatataaaaatttgaaatagtaataattaacttctatgattttttcattttatgaaaactttgaa 10480425  T
Q  174 tgatttt-ctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgat 272  Q
    | ||||| | ||||||| |||||||| ||||  | |||||||||||||||||||||||||| |||||| |  |||| | ||| | |||||  |||  |||    
T  10480426 ttatttttcgcattttcgatatcaattaaaacctttttctctatataaataactaaacaatcatttaaacggtcatttctcagtcgatttgacatttgat 10480525  T
Q  273 tcttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatc 372  Q
    |||||||||||| |||||| | ||||||| |||||| ||||||||| |||  |||| ||| | ||| ||||||| | ||||||||| ||  |||||| ||    
T  10480526 tcttgataatatgcatattatcaagaaaggatttgaaatatatgatcatagatgtacgccaagagaaaaatgatatgtgataagtgtggatcatgtggtc 10480625  T
Q  373 aaaatatcaactat 386  Q
    ||||| ||||||||    
T  10480626 aaaatgtcaactat 10480639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 190 - 327
Target Start/End: Complemental strand, 31340017 - 31339880
Alignment:
Q  190 aatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcata 289  Q
    ||||||||| |||||||||||||| |||||| |||||||||||| |||||||  ||||| | |||    |||||||||  |||| |||||||||||||||    
T  31340017 aatatcaataaaaatatctttctcaatataattaactaaacaatcatttaactgatcatttctcacacaatttcgcatttgattattgataatattcata 31339918  T
Q  290 tttttaagaaagaatttgagatatatgatgatatgtgt 327  Q
    || |  ||||||||||||||||||||||||||||||||    
T  31339917 ttatcgagaaagaatttgagatatatgatgatatgtgt 31339880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 283
Target Start/End: Complemental strand, 54393428 - 54393254
Alignment:
Q  112 tataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaata---tct 208  Q
    ||||||||||| ||||| ||| ||||||||| || |||| ||| |||||||||||||| |||||||||||||||||||||||||||| |||| |     |    
T  54393428 tataaaaatttgtagcattaaaaattgtcctctacgattattcatattatggaaactttgaatgattttctcattttcaatatcaataaaaaaaaacatt 54393329  T
Q  209 ttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataata 283  Q
    || |||||||||||||||||||||| ||||||||  ||||||   | ||||||||| |||| | |||| ||||||    
T  54393328 ttatctatataaataactaaacaattatttaaccggtcatctccgacttgatttcgtatccaaatcttaataata 54393254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 132 - 274
Target Start/End: Complemental strand, 52259831 - 52259689
Alignment:
Q  132 ataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaaca 231  Q
    ||||||||||| || ||| |||  |||| | ||||| | |||||||||||||||| ||||||||||| |||||| ||  ||| ||||||| ||| |||||    
T  52259831 ataattgtcctctacgatgttttatattctagaaacattgaatgattttctcattctcaatatcaataaaaatacctccctccatataaacaaccaaaca 52259732  T
Q  232 atgatttaaccaatcatctttcatttgatttcgcatccgattc 274  Q
    || ||||||||| ||||||  |||| |||||||||||||||||    
T  52259731 atcatttaaccagtcatctcccattcgatttcgcatccgattc 52259689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 1894969 - 1894916
Alignment:
Q  18 agtttttgtgtgcataatcatatatatcatggcatgaactatgtttgatattaa 71  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  1894969 agtttttgtgtgcataatcatatatatcatgacatgaactatgttggatattaa 1894916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 71
Target Start/End: Complemental strand, 1904415 - 1904362
Alignment:
Q  18 agtttttgtgtgcataatcatatatatcatggcatgaactatgtttgatattaa 71  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  1904415 agtttttgtgtgcataatcatatatatcatgacatgaactatgttggatattaa 1904362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 2933861 - 2933914
Alignment:
Q  18 agtttttgtgtgcataatcatatatatcatggcatgaactatgtttgatattaa 71  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  2933861 agtttttgtgtgcataatcatatatatcatgacatgaactatgttggatattaa 2933914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 44441778 - 44441875
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatacta 401  Q
    ||||||||||||||||||| ||||  ||| | ||||||||||||| ||||||||| |  ||||||||||||||| |||||||||  | ||||||||||    
T  44441778 tttgagatatatgatgataagtgtgcgccaagagagaaatgatttgtgataagtgtgatccatgtgatcaaaatgtcaactattgatacattatacta 44441875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 76 - 174
Target Start/End: Original strand, 44441600 - 44441699
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||||||||||||||||||||  |||| || ||||||||||| ||| | ||||||||||||| || |||| ||| |||||| ||||||| ||||    
T  44441600 gacggatccaggatttttgaatagtggaggcactatatataaaaatttgtagtattaataattgtcctctacgattattcatattattgaaactttgaat 44441699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 171 - 289
Target Start/End: Original strand, 49600729 - 49600847
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccg 270  Q
    |||||||||||||||||||||| ||||| ||||| ||| | ||||||||| |||||| ||||| || |||||| | |||   |||| ||||||||| | |    
T  49600729 gaatgattttctcattttcaatctcaataaaaatctctctttctatataagtaactagacaatcatctaaccattaatcacccattcgatttcgcaactg 49600828  T
Q  271 attcttgataatattcata 289  Q
    | |||||||||| ||||||    
T  49600829 agtcttgataatcttcata 49600847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 274
Target Start/End: Original strand, 34962274 - 34962377
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaa-tatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatcc 269  Q
    ||||||||||||| |||||||||||||| |||| |||||   |||||||||||||||||||||| |||||| || |||| || |||| |||||| ||||     
T  34962274 gaatgattttctcgttttcaatatcaataaaaagtatctcattctatataaataactaaacaatcatttaa-cagtcattttccattcgatttcacatct 34962372  T
Q  270 gattc 274  Q
    |||||    
T  34962373 gattc 34962377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 7867782 - 7867746
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  7867782 gagaaatgatatttgtacaactattttgtgacaactt 7867746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 14957836 - 14957872
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  14957836 gagaaatgatatttgtacaaccactttgtgacaactt 14957872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 18169157 - 18169193
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  18169157 gagaaatgatatttgtacaaccactttgtgacaactt 18169193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 20380960 - 20380924
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  20380960 gagaaatgatatttgtacaaccactttgtgacaactt 20380924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 38944212 - 38944176
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  38944212 gagaaatgatatttgtacaactaatttgtgacaactt 38944176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 48945847 - 48945883
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  48945847 gagaaatgatatttgtacaaccactttgtgacaactt 48945883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 51464343 - 51464307
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  51464343 gagaaatgatatttgtacaaccactttgtgacaactt 51464307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 442
Target Start/End: Complemental strand, 29800620 - 29800590
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtga 442  Q
    |||||||||||||||||||||||||||||||    
T  29800620 gagaaatgatatttgtacaactactttgtga 29800590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 446
Target Start/End: Original strand, 35272027 - 35272061
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaac 446  Q
    ||||||||||||||||||||| |||||||||||||    
T  35272027 gagaaatgatatttgtacaaccactttgtgacaac 35272061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 108431 - 108464
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  108431 gagaaatgatatttgtacaaccactttgtgacaa 108464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 5398918 - 5398951
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  5398918 gagaaatgatatttgtacaaccactttgtgacaa 5398951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 12792638 - 12792671
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  12792638 gagaaatgatatttgtacaaccactttgtgacaa 12792671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 20215948 - 20215981
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  20215948 gagaaatgatatttgtacaaccactttgtgacaa 20215981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 31997816 - 31997849
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||| |||||||||||||||    
T  31997816 aaatgatatttgtacaaccactttgtgacaactt 31997849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 34607991 - 34607958
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  34607991 gagaaatgatatttgtacaaccactttgtgacaa 34607958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 34733359 - 34733326
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||| |||||||||||||||    
T  34733359 aaatgatatttgtacaaccactttgtgacaactt 34733326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 232
Target Start/End: Original strand, 44111249 - 44111310
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaa 232  Q
    |||| ||||| |||||||| || ||||| ||||||||  ||||||||||| |||||||||||    
T  44111249 gaataattttttcattttcgatctcaataaaaatatcactctctatataagtaactaaacaa 44111310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 45205288 - 45205321
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||||| ||||||||||    
T  45205288 gagaaatgatatttgtacaactattttgtgacaa 45205321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 462472 - 462436
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  462472 gagaaatgatatttgtacaaccattttgtgacaactt 462436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 1295332 - 1295368
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  1295332 gagaaatgatatttgtacaactattttgtgataactt 1295368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 3069645 - 3069609
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  3069645 gagaaatgatatttgtacaaccaatttgtgacaactt 3069609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 3483132 - 3483168
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  3483132 gagaaatgatatttgtacaaccactttgtgacgactt 3483168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 7294171 - 7294135
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  7294171 gagaaatgatatttgtacatccactttgtgacaactt 7294135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 8254027 - 8254063
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  8254027 gagaaatgatatttgtacaaccattttgtgacaactt 8254063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 9027873 - 9027909
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  9027873 gagaaatgatatttgtacaaccactttgtgataactt 9027909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 11173458 - 11173494
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  11173458 gagaattgatatttgtacaaccactttgtgacaactt 11173494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 11327108 - 11327144
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  11327108 gagaaatgatatttgtacaaccattttgtgacaactt 11327144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 20714243 - 20714279
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  20714243 gagaaatgatatttgtacaaccaatttgtgacaactt 20714279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 22813072 - 22813108
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  22813072 gagaaatgatatttgtacaaccactttctgacaactt 22813108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 24537219 - 24537255
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  24537219 gagaaatgatatttgtacatccactttgtgacaactt 24537255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 26279884 - 26279920
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  26279884 gagaaatgatatttgtacaaccactttctgacaactt 26279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 28300719 - 28300683
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  28300719 gagaaatgatatttgtacaaccactttatgacaactt 28300683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 30400227 - 30400191
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  30400227 gagaaatgatatttgtacaacaaatttgtgacaactt 30400191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 30796685 - 30796649
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||| ||||| |||||||||||||||    
T  30796685 gagaaatgatatttgcacaaccactttgtgacaactt 30796649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 32457826 - 32457790
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  32457826 gagaaatgatatttgtacaaccactttttgacaactt 32457790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 32931989 - 32931953
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  32931989 gagaaatgatatttgtacaaccaatttgtgacaactt 32931953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 34271561 - 34271525
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  34271561 gagaaatgatatttgtacaaccactttgtaacaactt 34271525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 36818956 - 36818992
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  36818956 gagaaatgatatttgtacaaccaatttgtgacaactt 36818992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 444
Target Start/End: Complemental strand, 41877682 - 41877650
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgaca 444  Q
    ||||||||||||||||||||| |||||||||||    
T  41877682 gagaaatgatatttgtacaaccactttgtgaca 41877650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 43169813 - 43169777
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  43169813 gagaaatgatatttgtacaaccattttgtgacaactt 43169777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 44855251 - 44855287
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  44855251 gagaaatgatatttgtataactattttgtgacaactt 44855287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 45529013 - 45528977
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  45529013 gagaaatgatatttgtacaactattttttgacaactt 45528977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 46316026 - 46315990
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  46316026 gagaaatgatatttgtacaaccactttatgacaactt 46315990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 46473128 - 46473164
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  46473128 gagaaatgatatttgtacaaccactttgcgacaactt 46473164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 47683801 - 47683837
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  47683801 gagaaatgatatttgtacaaccattttgtgacaactt 47683837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 48405410 - 48405446
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  48405410 gagaaatgatatttgtacaaccattttgtgacaactt 48405446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 49196696 - 49196732
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  49196696 gagaaatgatatttgtacaaccattttgtgacaactt 49196732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 50294183 - 50294147
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||| ||||||||    
T  50294183 gagaaatgatatttgtacaaccactttgcgacaactt 50294147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 50559283 - 50559247
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  50559283 gagaaatgatatttgtacaactattttttgacaactt 50559247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 50879595 - 50879631
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||||||  ||||||||||||    
T  50879595 gagaaatgatatttgtacaactaaattgtgacaactt 50879631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 51672863 - 51672899
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| ||||||||||| |||||    
T  51672863 gagaaatgatatttgtacatctactttgtgataactt 51672899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 137; Significance: 2e-71; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 112 - 396
Target Start/End: Complemental strand, 28529223 - 28528939
Alignment:
Q  112 tataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttc 211  Q
    ||||||||| | ||||| |||||||||| || |  |||||||| |||||| |||||||  || |||||| ||||||||||||||||| ||||||| ||||    
T  28529223 tataaaaatctgtagcattaataattgttctctccgatttttcatattatagaaactttaaaagattttatcattttcaatatcaataaaaatatttttc 28529124  T
Q  212 tctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagat 311  Q
    ||| |||||||||||||||||| || ||||| ||||||| |||||  |||| |||||||||||||||||||| ||||||| | |||||||||||||||||    
T  28529123 tctgtataaataactaaacaatcatgtaaccgatcatctctcattcaattttgcatccgattcttgataataatcatattgtcaagaaagaatttgagat 28529024  T
Q  312 atatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcatta 396  Q
    |||||||||||||||| | || |||||||||| |||| ||||||||| || ||||||||||||||| |||| |||| || |||||    
T  28529023 atatgatgatatgtgtggaccaaaagagaaattatttctgataagtgtggaccatgtgatcaaaatgtcaattattggtacatta 28528939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 156 - 399
Target Start/End: Original strand, 44718840 - 44719081
Alignment:
Q  156 tattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcat 255  Q
    ||||||| ||||||  ||||||||||| ||||||||||||| |  || |||||||||||||||||||||||||||||| |||||||| || || ||||||    
T  44718840 tattatgaaaactttcaatgattttcttattttcaatatcagtagaagtatctttctctatataaataactaaacaatcatttaaccgattatttttcat 44718939  T
Q  256 ttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataa 355  Q
    | |||||| ||||| | ||||||||| ||||||||| | ||||||||||||||||||| ||||||||  |||||||  ||||||||||||||||| ||||    
T  44718940 tcgatttcacatccaaatcttgataaaattcatattatcaagaaagaatttgagatatttgatgata--tgtaggcaaaaagagaaatgatttataataa 44719037  T
Q  356 gtgggggccatgtgatcaaaatatcaactattagtgcattatac 399  Q
    ||| || | ||| | | |||||||||||||||||| ||||||||    
T  44719038 gtgaggacaatgaggtaaaaatatcaactattagtacattatac 44719081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 200 - 332
Target Start/End: Complemental strand, 42531033 - 42530893
Alignment:
Q  200 aaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgata--------atattcatatt 291  Q
    ||||||| |||| ||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||||||||        |||||||||||    
T  42531033 aaaatatatttcactatataaataactaaacaatcatttaaccgatcatctctcatttgatttcgcatccgattcttgataatatgataatattcatatt 42530934  T
Q  292 tttaagaaagaatttgagatatatgatgatatgtgtaggcc 332  Q
     | |||||||  ||||||||||||||||||| |||| ||||    
T  42530933 atcaagaaagtttttgagatatatgatgataagtgtgggcc 42530893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 304 - 403
Target Start/End: Original strand, 42071527 - 42071626
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatactatt 403  Q
    ||||||||||||||||||| |||| | || | ||||||||||||| ||||||||| ||  ||||||||||||||  ||||||||||| ||||||||||||    
T  42071527 tttgagatatatgatgataggtgtggaccaagagagaaatgatttgtgataagtgtggatcatgtgatcaaaatgccaactattagtacattatactatt 42071626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 156 - 228
Target Start/End: Original strand, 42071417 - 42071489
Alignment:
Q  156 tattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaa 228  Q
    |||||| |||||||  ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||    
T  42071417 tattatcgaaactttaaatgattttctcattttcaatatcaataaaaatatatttatctatataaataactaa 42071489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 21490703 - 21490738
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaact 447  Q
    ||||||||||||||||||||||||||||||||||||    
T  21490703 gagaaatgatatttgtacaactactttgtgacaact 21490738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 21490384 - 21490265
Alignment:
Q  129 ataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaa 228  Q
    ||||||| |||  |||| |||||||| |||| | ||||| | |||||||||||||| ||||||||||||| |||||||   ||||||| ||| ||||       
T  21490384 ataataagtgttgtttacgatttttcatattcttgaaacattgaatgattttctcaatttcaatatcaataaaaatatacatctctatctaagtaac--g 21490287  T
Q  229 acaatgatttaaccaatcatct 250  Q
    ||||| ||||||||| ||||||    
T  21490286 acaatcatttaaccattcatct 21490265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 4738643 - 4738607
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  4738643 gagaaatgatatttgtacaaccactttgtgacaactt 4738607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 5067717 - 5067681
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5067717 gagaaatgatatttgtacatctactttgtgacaactt 5067681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 14140408 - 14140372
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  14140408 gagaaatgatatttgtacaactaatttgtgacaactt 14140372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 30856807 - 30856843
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  30856807 gagaaatgatatttgtacaaccactttgtgacaactt 30856843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 31629604 - 31629640
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||||||| |||||||||    
T  31629604 gagaaatgatatttgtacaactactttttgacaactt 31629640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 33296142 - 33296106
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  33296142 gagaaatgatatttgtacaaccactttgtgacaactt 33296106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 36435681 - 36435717
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36435681 gagaaatgatatttgtacaaccactttgtgacaactt 36435717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 42283310 - 42283275
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaact 447  Q
    ||||||||||||||||||||| ||||||||||||||    
T  42283310 gagaaatgatatttgtacaaccactttgtgacaact 42283275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 171 - 248
Target Start/End: Complemental strand, 7813624 - 7813549
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcat 248  Q
    |||||||||||||||||| |||| |||  || ||||||  |||||||||| ||||||||||||  |||||||| ||||    
T  7813624 gaatgattttctcattttaaataccaacaaatatatct--ctctatataagtaactaaacaattgtttaaccattcat 7813549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 176 - 289
Target Start/End: Complemental strand, 947492 - 947379
Alignment:
Q  176 attttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattct 275  Q
    |||||||||||||| || ||||| ||||||||  |||| |||||| ||| |||| ||| | |||| || ||||||| |||   ||||| ||||| |||||    
T  947492 attttctcattttcgatgtcaataaaaatatcactctcaatataagtaaataaataattaattaatcattcatcttccatgcaatttcacatccaattct 947393  T
Q  276 tgataatattcata 289  Q
    ||  ||||||||||    
T  947392 tgtaaatattcata 947379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 5167813 - 5167780
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  5167813 gagaaatgatatttgtacaaccactttgtgacaa 5167780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 6365186 - 6365219
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  6365186 gagaaatgatatttgtacaaccactttgtgacaa 6365219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 15283321 - 15283288
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  15283321 gagaaatgatatttgtacaaccactttgtgacaa 15283288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 36132974 - 36133007
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  36132974 gagaaatgatatttgtacaaccactttgtgacaa 36133007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 41040266 - 41040299
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  41040266 gagaaatgatatttgtacaaccactttgtgacaa 41040299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 3091741 - 3091777
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  3091741 gagaaatgatatttgtacaactattttgtgataactt 3091777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 4036947 - 4036911
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||||||| | |||||||    
T  4036947 gagaaatgatatttgtacaactactttttaacaactt 4036911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 6884910 - 6884946
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  6884910 gagaaatgatatttgtacaactaatttgtgataactt 6884946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 8482292 - 8482256
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  8482292 gagaaatgatatttgtacaaccactttatgacaactt 8482256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 11229392 - 11229356
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  11229392 gagaaatgatatttgtacatccactttgtgacaactt 11229356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 14891149 - 14891113
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  14891149 gagaaatgatatttgtacaactattttgtgataactt 14891113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 22303203 - 22303239
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  22303203 gagaaatgatatttgtacaactattttttgacaactt 22303239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 24727661 - 24727625
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  24727661 gagaaatgatatttgtacaaccactttttgacaactt 24727625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 25507255 - 25507291
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  25507255 gagaaatgatatttgtacaaccactttttgacaactt 25507291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 25801873 - 25801837
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  25801873 gagaaatgatatttgtacaaccaatttgtgacaactt 25801837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 29795447 - 29795483
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  29795447 gagaaatgatatttgtacaaccattttgtgacaactt 29795483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 29893610 - 29893646
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  29893610 gagaaatgatatttgtacaactaatttgtgataactt 29893646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 30487540 - 30487504
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  30487540 gagaaatgatatttgtacaaccaatttgtgacaactt 30487504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 36909914 - 36909878
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  36909914 gagaaatgatatttgtacaaccattttgtgacaactt 36909878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 37966367 - 37966403
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  37966367 gagaaatgatatttgtacaaccaatttgtgacaactt 37966403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 43725216 - 43725252
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  43725216 gagaaatgatatttgtacatctactttatgacaactt 43725252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 44189827 - 44189863
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  44189827 gagaaatgatatttgtacaaccactttatgacaactt 44189863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 45376292 - 45376256
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  45376292 gagaaatgatatttgtacaaccactttttgacaactt 45376256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 1e-66; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 115 - 387
Target Start/End: Original strand, 6822518 - 6822790
Alignment:
Q  115 aaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctct 214  Q
    |||||||| ||||| ||||||||||||||||  ||||||| |||||||||||||| |||||||||  ||||||||||||||||| ||||| ||||||| |    
T  6822518 aaaaatttgtagcattaataattgtcctttacaatttttcatattatggaaactttgaatgatttgttcattttcaatatcaataaaaatttctttcttt 6822617  T
Q  215 atataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatata 314  Q
    ||||||||||||||||||| |||||||| ||||||| ||||| |||||| ||||||||||||||||||||||||||| | | |||  |||||||||||||    
T  6822618 atataaataactaaacaattatttaaccgatcatctctcattcgatttcacatccgattcttgataatattcatattatcatgaataaatttgagatata 6822717  T
Q  315 tgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactatt 387  Q
    ||||||||  ||| || | | ||| ||||||||| |||||| || ||   ||||||||||||| |||| ||||    
T  6822718 tgatgatagatgtgggtcaagagaaaaatgatttgtgataaatgtggattatgtgatcaaaatgtcaattatt 6822790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 258 - 401
Target Start/End: Complemental strand, 11769903 - 11769760
Alignment:
Q  258 gatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagt 357  Q
    |||||||||||||||||||||| ||||| ||||| | |||||| |||||||||||||||||||||| | |  ||| ||||||||||||||| ||| ||||    
T  11769903 gatttcgcatccgattcttgattatatttatattatcaagaaaaaatttgagatatatgatgatatatttgagccaaaagagaaatgatttgtgagaagt 11769804  T
Q  358 gggggccatgtgatcaaaatatcaactattagtgcattatacta 401  Q
    | ||||||| |||||||||| | |||||||| | ||||||||||    
T  11769803 gtgggccatatgatcaaaatgttaactattaatacattatacta 11769760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 178 - 355
Target Start/End: Complemental strand, 18250933 - 18250755
Alignment:
Q  178 tttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttg 277  Q
    ||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||| ||||| |   |||||| |||   ||||| ||||  ||||||||    
T  18250933 tttctcattttgaatattaataaaaatatttttctctatataaataactaaacaatcatttatctggtcatctctcacgcgattttgcatttgattcttg 18250834  T
Q  278 ataatattcatatttttaagaaagaatttgagatatatgatgat-atgtgtaggccgaaagagaaatgatttatgataa 355  Q
    |||||||||||||| | |||||||||||||| |||||||| ||| |||||| | || | |||||||| |||| ||||||    
T  18250833 ataatattcatattatcaagaaagaatttgaaatatatgacgataatgtgtggaccaagagagaaataatttgtgataa 18250755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 134 - 233
Target Start/End: Complemental strand, 33106920 - 33106823
Alignment:
Q  134 aattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaat 233  Q
    |||| ||||||| |||||||  ||||||| ||| || ||||||||| |||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  33106920 aattatcctttacgattttta-tattatgtaaattttgaatgattt-ctcattttcaatatcaataaaaatatatttctctatataaataactaaacaat 33106823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 285 - 401
Target Start/End: Complemental strand, 33106823 - 33106707
Alignment:
Q  285 tcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaact 384  Q
    ||||||| | |||||||||||||| ||||||||  ||||||||||||| | |||||||| |||| ||||||||| |   ||| || ||||||| ||||||    
T  33106823 tcatattatcaagaaagaatttgatatatatgactatatgtgtaggccaagagagaaataatttgtgataagtgtgaatcatatggtcaaaatgtcaact 33106724  T
Q  385 attagtgcattatacta 401  Q
    |||  | ||||||||||    
T  33106723 attgatacattatacta 33106707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 134 - 289
Target Start/End: Complemental strand, 6901697 - 6901536
Alignment:
Q  134 aattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctc------tatataaataacta 227  Q
    ||||||||| || || || || |||| ||||||  | |||||||||||||||||||||| ||||| ||||| ||| ||||      ||||||| ||||||    
T  6901697 aattgtcctctacgacttgtcatattttggaaatatcgaatgattttctcattttcaatctcaataaaaatctctctctctctctatatataagtaacta 6901598  T
Q  228 aacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcata 289  Q
     ||||| ||||||||| | ||| | |||| ||||||||| | || |||||||||| ||||||    
T  6901597 gacaatcatttaaccattgatcatccattcgatttcgcagctgagtcttgataatcttcata 6901536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 12441538 - 12441574
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||||||||||||||||||||    
T  12441538 gagaaatgatatttgtacaactactttgtgacaactt 12441574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 27334858 - 27334894
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  27334858 gagaaatgatatttgtacaactattttgtgacaactt 27334894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 27395598 - 27395634
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  27395598 gagaaatgatatttgtacaactattttgtgacaactt 27395634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 32457323 - 32457287
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  32457323 gagaaatgatatttgtacaaccactttgtgacaactt 32457287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 448
Target Start/End: Original strand, 6435037 - 6435072
Alignment:
Q  413 agaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| |||||||||||||||    
T  6435037 agaaatgatatttgtacaaccactttgtgacaactt 6435072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 28549078 - 28549045
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| ||||||||||||||    
T  28549078 aaatgatatttgtacaactgctttgtgacaactt 28549045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 30796146 - 30796113
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  30796146 gagaaatgatatttgtacaaccactttgtgacaa 30796113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 1897697 - 1897733
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  1897697 gagaaatgatatttgtacaaccactttatgacaactt 1897733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 2056783 - 2056819
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  2056783 gagaaatgatatttgtacaaccaatttgtgacaactt 2056819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 3339570 - 3339534
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  3339570 gagaaatgatatttgtacaaccattttgtgacaactt 3339534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 9954548 - 9954584
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  9954548 gagaaatgatatttgtacaaccaatttgtgacaactt 9954584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 10521126 - 10521162
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| |||||||||| |||||    
T  10521126 gagaaatgatatttgtacaattactttgtgataactt 10521162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 12177577 - 12177613
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||| |||||||||||||| |||||||||||||    
T  12177577 gagaaatgttatttgtacaactattttgtgacaactt 12177613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 29383557 - 29383593
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  29383557 gagaaatgatatttgtacaaccactttctgacaactt 29383593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 31517240 - 31517204
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  31517240 gagaaatgatatttgtacaaccactttttgacaactt 31517204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 31883375 - 31883339
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  31883375 gagaaatgatatttgtacaaccactttttgacaactt 31883339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 32149500 - 32149536
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  32149500 gagaaataatatttgtacaaccactttgtgacaactt 32149536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 32644623 - 32644659
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  32644623 gagaaatgatatttgtacaactattttttgacaactt 32644659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 33527435 - 33527471
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||| |||||||||||||||| |||||    
T  33527435 gagaaatgatatttatacaactactttgtgataactt 33527471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 2e-65; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 76 - 401
Target Start/End: Original strand, 15810665 - 15810991
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgca-catttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||| ||||||||| ||||||||  ||| ||| || |||||||| ||||| ||||||||||||| ||  ||||||| ||||| |||||||| |||     
T  15810665 gacggatctaggattttttaatagtggaggcatcatataaaaaaatttgtagcattaataattgtcctctacaatttttcatattacggaaactttgaac 15810764  T
Q  175 gattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattc 274  Q
    | |||||| ||||| || |||||| ||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||| ||||| |||||| ||||    
T  15810765 ggttttcttattttgaaaatcaataaaaatatatttctctatataaataactaaacaatcatttaaccgatcatctctcattcgattttgcatccaattc 15810864  T
Q  275 ttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaa 374  Q
    ||||||||||||||| | | || ||| |||||||||||||||||||||| ||| |||| ||||| |||| |||| |||||||||  | || |||| ||||    
T  15810865 ttgataatattcatactatcaaaaaataatttgagatatatgatgatatatgtgggccaaaagaaaaataatttgtgataagtgtagaccgtgtggtcaa 15810964  T
Q  375 aatatcaactattagtgcattatacta 401  Q
    ||| | |||||||  | ||||||||||    
T  15810965 aatgtgaactattgatacattatacta 15810991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 76 - 401
Target Start/End: Original strand, 15726821 - 15727146
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    ||||||| ||| |||||| ||||||||| |||| || || |||||||| ||||| ||||||||||||| ||| ||||||| |||||||||||||| ||||    
T  15726821 gacggattcagaattttttaatagtggg-gcaccatataaaaaaatttgtagcattaataattgtcctctataatttttcatattatggaaactttgaat 15726919  T
Q  175 gattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattc 274  Q
    | |||||| ||||| || |||||| ||||||| ||||| |||||||||||||||||||| |||||||| ||||||| |||||  |||| ||||| |||||    
T  15726920 ggttttcttattttgaaaatcaataaaaatatatttctttatataaataactaaacaatcatttaaccgatcatctctcattcaattttgcatcagattc 15727019  T
Q  275 ttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaa 374  Q
    ||||||||||||||| | | |||||| ||||||||||||||||| |||| ||| |||| ||| | |||| |||| |||||| || ||  | | |||||||    
T  15727020 ttgataatattcatactatcaagaaataatttgagatatatgattatatatgtgggccaaaatacaaataatttgtgataaatgtggatcgtatgatcaa 15727119  T
Q  375 aatatcaactattagtgcattatacta 401  Q
    ||| |||||||||  | ||||||||||    
T  15727120 aatgtcaactattgatacattatacta 15727146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 84 - 348
Target Start/End: Original strand, 29368448 - 29368713
Alignment:
Q  84 caggatttttgaatagtgggtgca-catttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttct 182  Q
    |||||||||||| || |||| ||| ||| ||||||||||| ||||| ||||||||||||| ||  ||||||| |||||| ||||||| ||||| ||||||    
T  29368448 caggatttttgattattgggggcatcatatataaaaatttgtagcattaataattgtcctctagaatttttcatattattgaaactttgaatggttttct 29368547  T
Q  183 cattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataat 282  Q
    |||||||||||||||| ||| ||| ||||| |||||||||||   |||||| |||||||| |||||||  |||| ||||  | ||||| |||||||||||    
T  29368548 cattttcaatatcaataaaagtatatttctttatataaataatcgaacaatcatttaaccgatcatctcacattcgattatgtatccggttcttgataat 29368647  T
Q  283 attcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgattt 348  Q
    ||||||||| | || |||||||||||||||||||||||||| |||  ||| | |||||||||||||    
T  29368648 attcatattatcaataaagaatttgagatatatgatgatatatgtgagccaagagagaaatgattt 29368713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 185 - 387
Target Start/End: Original strand, 4930660 - 4930861
Alignment:
Q  185 ttttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatat 284  Q
    |||||||||||||| ||||||| ||||| |||||||||||||||| ||| |||||||  |||||||| |||| || ||| ||||||||||||||||||||    
T  4930660 ttttcaatatcaataaaaatatatttctttatataaataactaaataatcatttaactgatcatcttccattcgacttcacatccgattcttgataatat 4930759  T
Q  285 tcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaact 384  Q
    ||||||| | || ||||||||||||||| ||| |||||||||| | || | | ||||||||||| ||| |||||  || |||||| ||||||| ||||||    
T  4930760 tcatattatcaaaaaagaatttgagatacatg-tgatatgtgtggaccaagaaagaaatgatttgtgagaagtgtaggtcatgtggtcaaaatctcaact 4930858  T
Q  385 att 387  Q
    |||    
T  4930859 att 4930861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 76 - 229
Target Start/End: Complemental strand, 22399557 - 22399404
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||| ||||| || |||||||||| ||  ||| ||| ||||||||||||||  |||    
T  22399557 gacggatccaggatttttgaatagtgggcgcactatatataaaaatttgtagcattagtaattgtcctatagaattattcatattatggaaactttaaat 22399458  T
Q  175 gattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaa 229  Q
    ||||||||||||||||||||||||  ||| |  |||||| |||||||||||||||    
T  22399457 gattttctcattttcaatatcaatagaaaaacatttctc-atataaataactaaa 22399404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 125092 - 125128
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||||||||||||||||||||    
T  125092 gagaaatgatatttgtacaactactttgtgacaactt 125128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 225
Target Start/End: Complemental strand, 17229054 - 17229004
Alignment:
Q  175 gattttctcattttcaatatcaatgaaaatatctttctctatataaataac 225  Q
    ||||||||||||||||| |||||| ||||||| ||||||||| ||||||||    
T  17229054 gattttctcattttcaaaatcaataaaaatatttttctctatgtaaataac 17229004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 38351726 - 38351768
Alignment:
Q  271 attcttgataatattcatatttttaagaaagaatttgagatat 313  Q
    ||||||||||||||||||||| | |||||||||||||||||||    
T  38351726 attcttgataatattcatattatcaagaaagaatttgagatat 38351768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 271 - 332
Target Start/End: Complemental strand, 17228975 - 17228914
Alignment:
Q  271 attcttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggcc 332  Q
    |||||||| |||||||||||| | || |||||||||||| ||||||||||||| ||| ||||    
T  17228975 attcttgacaatattcatattatcaaaaaagaatttgagctatatgatgatatatgtgggcc 17228914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 1774354 - 1774318
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| |||||||||||||||||    
T  1774354 gagaaatgatatttgtacatctactttgtgacaactt 1774318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 6865847 - 6865811
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6865847 gagaaatgatatttgtacaaccactttgtgacaactt 6865811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 19127124 - 19127160
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  19127124 gagaaatgatatttgtacaaccactttgtgacaactt 19127160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 23991205 - 23991169
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  23991205 gagaaatgatatttgtacaaccactttgtgacaactt 23991169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 27343218 - 27343174
Alignment:
Q  164 aaacttagaatgattttctcattttcaatatcaatgaaaatatct 208  Q
    |||||| |||||||||||||||||||||| ||||| |||||||||    
T  27343218 aaactttgaatgattttctcattttcaatgtcaataaaaatatct 27343174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 28811429 - 28811465
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  28811429 gagaaatgatatttgtacaaccactttgtgacaactt 28811465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 448
Target Start/End: Original strand, 29227721 - 29227753
Alignment:
Q  416 aatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||||||||||||||||    
T  29227721 aatgatatttgtacaactactttgtgacaactt 29227753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 34381012 - 34381048
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34381012 gagaaatgatatttgtacaaccactttgtgacaactt 34381048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 36713249 - 36713213
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  36713249 gagaaatgatatttgtacaaccactttgtgacaactt 36713213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 39595272 - 39595308
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  39595272 gagaaatgatatttgtacaaccactttgtgacaactt 39595308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Complemental strand, 14508228 - 14508193
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaact 447  Q
    ||||||||||||||||||||||| ||||||||||||    
T  14508228 gagaaatgatatttgtacaactattttgtgacaact 14508193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 448
Target Start/End: Original strand, 12910786 - 12910820
Alignment:
Q  414 gaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| |||||||||||||||    
T  12910786 gaaatgatatttgtacaaccactttgtgacaactt 12910820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 198
Target Start/End: Original strand, 40909995 - 40910037
Alignment:
Q  156 tattatggaaacttagaatgattttctcattttcaatatcaat 198  Q
    |||||| ||||||| ||||||| ||||||||||||||||||||    
T  40909995 tattatagaaactttgaatgatcttctcattttcaatatcaat 40910037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 4098626 - 4098659
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| |||||||||||||    
T  4098626 aaatgatatttgtacaactattttgtgacaactt 4098659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 33567280 - 33567247
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||| |||||||||||||||    
T  33567280 aaatgatatttgtacaaccactttgtgacaactt 33567247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 3263579 - 3263543
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  3263579 gagaaatgatatttgtacaaccaatttgtgacaactt 3263543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 4800573 - 4800537
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||| |||||||||||| |||||||||    
T  4800573 gagaaatgatatttatacaactactttttgacaactt 4800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 4954466 - 4954502
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| || |||||||||||||    
T  4954466 gagaaatgatatttgtacaattaatttgtgacaactt 4954502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 5130438 - 5130402
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||| |||||| |||||||||||||||||    
T  5130438 gagaaatgatatatgtacatctactttgtgacaactt 5130402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 8728652 - 8728616
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  8728652 gagaaatgatatttgtacaaccactttttgacaactt 8728616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 8959160 - 8959196
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| | |||||||||||    
T  8959160 gagaaatgatatttgtacaactattatgtgacaactt 8959196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 9594478 - 9594514
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  9594478 gagaaatgatatttgtacaaccaatttgtgacaactt 9594514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 9599799 - 9599763
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  9599799 gagaaatgatatttgtacaaccaatttgtgacaactt 9599763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 11768061 - 11768025
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  11768061 gagaaatgatatttgtacatccactttgtgacaactt 11768025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 12718451 - 12718415
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  12718451 gagaaatgatatttgtacaaccaatttgtgacaactt 12718415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 12779677 - 12779641
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  12779677 gagaaatgatatttgtacaaccaatttgtgacaactt 12779641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 13734420 - 13734384
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  13734420 gagaaatgatatttgtacaaccactttatgacaactt 13734384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 14780492 - 14780456
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  14780492 gagaaatgatatttgtacatctactttttgacaactt 14780456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 14914372 - 14914408
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  14914372 gagaaatgatatttgtacaaccattttgtgacaactt 14914408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 15918061 - 15918025
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| || |||||||||||||    
T  15918061 gagaaatgatatttgtacaattaatttgtgacaactt 15918025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 16143390 - 16143426
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  16143390 gagaaatgatatttgtacaaccattttgtgacaactt 16143426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 19376203 - 19376167
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  19376203 gagaaatgatatttgtacaaccactttctgacaactt 19376167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 28903991 - 28904027
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| || ||||||||||||    
T  28903991 gagaaatgatatttgtacaaccacattgtgacaactt 28904027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 28940386 - 28940422
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| || ||||||||||||    
T  28940386 gagaaatgatatttgtacaaccacattgtgacaactt 28940422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 29803225 - 29803261
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  29803225 gagaaatgatatttgtacaactattttttgacaactt 29803261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 30574448 - 30574412
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  30574448 gagaaatgatatttgtacaaccaatttgtgacaactt 30574412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 30838436 - 30838400
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| ||||||| |||||||||    
T  30838436 gagaaatgatatttgtacatctactttttgacaactt 30838400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 34428160 - 34428196
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  34428160 gagaaatgatatttgtacaactattttttgacaactt 34428196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 36572691 - 36572727
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  36572691 gagaaatgatatttgtataactattttgtgacaactt 36572727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 40223856 - 40223820
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||| ||||||||||||| |||||||||||||||    
T  40223856 gagaaattatatttgtacaaccactttgtgacaactt 40223820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 41621999 - 41621963
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  41621999 gagaaatgatatttgtacaaccactttttgacaactt 41621963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 42699057 - 42699093
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  42699057 gagaaatgatatttgtacaaccattttgtgacaactt 42699093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 43057435 - 43057471
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  43057435 gagaaatgatatttgtacaaccactttttgacaactt 43057471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 121; Significance: 8e-62; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 124 - 332
Target Start/End: Original strand, 40381594 - 40381802
Alignment:
Q  124 tagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaata 223  Q
    ||||| ||||||||||| | || |||||||  |||||| ||||||| ||| |||||||||||||||||||||||| ||||||| ||||||||||||||||    
T  40381594 tagcattaataattgtcttctacgattttttatattatagaaactttgaaagattttctcattttcaatatcaataaaaatatatttctctatataaata 40381693  T
Q  224 actaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatgatgatat 323  Q
    |||||||||| |||||||| ||||||| ||||| |||||| ||| ||||||||||||||||||||||| | || ||| ||||||||||||||||||||||    
T  40381694 actaaacaatcatttaaccgatcatctctcattcgatttcacatgcgattcttgataatattcatattatcaaaaaataatttgagatatatgatgatat 40381793  T
Q  324 gtgtaggcc 332  Q
    |||| ||||    
T  40381794 gtgtgggcc 40381802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 89 - 318
Target Start/End: Complemental strand, 42164204 - 42163974
Alignment:
Q  89 tttttgaatagtgggtgca-catttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattt 187  Q
    ||||||||||||||| | | ||| ||||||| ||| ||||| |||| ||| || | ||  ||||||  ||||||||||| || |||||||||||||||||    
T  42164204 tttttgaatagtgggggtatcatatataaaattttgtagcattaatgattatcatctacaattttttatattatggaaattttgaatgattttctcattt 42164105  T
Q  188 tcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattca 287  Q
    | ||||||||| |||||||| ||||||||||||||||||||||||| |||||||| || |||| ||||| ||||||  ||  ||||||||||||||||||    
T  42164104 ttaatatcaataaaaatatccttctctatataaataactaaacaatcatttaaccgattatctctcattcgatttcctatttgattcttgataatattca 42164005  T
Q  288 tatttttaagaaagaatttgagatatatgat 318  Q
    |||| | |||||| |||| ||||||||||||    
T  42164004 tattatcaagaaataattagagatatatgat 42163974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 80 - 360
Target Start/End: Original strand, 3310494 - 3310775
Alignment:
Q  80 gatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgatt 178  Q
    ||||||| |||||||||| ||||| |||| || ||| ||||||| ||||| ||||||||||||| ||  ||||||| |||||||||||||| |  | ||     
T  3310494 gatccagaatttttgaatggtgggggcactatatatgaaaatttgtagcattaataattgtcctctactatttttcatattatggaaactttggtt-atc 3310592  T
Q  179 ttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttga 278  Q
    || ||||||||||||||| | ||||||| |||| ||||| |||||| |||||||  ||||||||   ||||| ||||| || ||| ||||||||||||||    
T  3310593 ttatcattttcaatatcattaaaaatatatttcactatacaaataattaaacaaacatttaaccggacatctctcattcgaattctcatccgattcttga 3310692  T
Q  279 taatattcatatttttaag-aaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtggg 360  Q
    ||||||||||| | | ||| ||| |||||||||||||||||||||   ||  ||| |||||||||| ||||  ||||||||||    
T  3310693 taatattcatactatgaagaaaaaaatttgagatatatgatgataaacgtgagccaaaagagaaataatttcggataagtggg 3310775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 200 - 401
Target Start/End: Complemental strand, 14539589 - 14539388
Alignment:
Q  200 aaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaa 299  Q
    ||||||| ||| |||||||||||||||||||||| ||||||||  ||||||  || | ||||||||||| |||| ||||||||||||||| | | |||||    
T  14539589 aaaatatttttttctatataaataactaaacaatcatttaaccggtcatctcccactcgatttcgcatctgatttttgataatattcatactatcaagaa 14539490  T
Q  300 agaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatac 399  Q
    || |||||||||||||||| ||| |||| |||| | ||||||||||||| || |||||| || |||||| || ||||| |||| |||  || ||||||||    
T  14539489 aggatttgagatatatgattataggtgtgggccaagagagaaatgatttgtgttaagtgtggaccatgtaattaaaatgtcaattatgggtacattatac 14539390  T
Q  400 ta 401  Q
    ||    
T  14539389 ta 14539388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 112 - 327
Target Start/End: Complemental strand, 37728571 - 37728356
Alignment:
Q  112 tataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttc 211  Q
    ||||||||||| ||||| |||||||||| || ||||||||| | ||  ||||||| || |||| ||||||| ||||||||||||||| |||||||| |||    
T  37728571 tataaaaatttgtagcattaataattgttctctatgattttccgtaccatggaaaatttgaataattttctaattttcaatatcaataaaaatatcattc 37728472  T
Q  212 tctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagat 311  Q
    ||||||||||||||||||| || |||||||||  |||||  || | ||||| |||||  ||||||||| ||||||||||  | || |||  |||| | ||    
T  37728471 tctatataaataactaaacgatcatttaaccagccatctcacactcgattttgcatctaattcttgatcatattcatatcatcaaaaaatgatttaaaat 37728372  T
Q  312 atatgatgatatgtgt 327  Q
    ||||||||||| ||||    
T  37728371 atatgatgataggtgt 37728356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 76 - 167
Target Start/End: Original strand, 1336109 - 1336201
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaac 167  Q
    |||||||||||||||||||||||||||| |||| |  ||||||||||| ||||| || |||||||||| ||||||| ||| ||||||||||||    
T  1336109 gacggatccaggatttttgaatagtgggggcactacatataaaaatttgtagcattagtaattgtcctctatgattattcatattatggaaac 1336201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 171 - 243
Target Start/End: Original strand, 2537200 - 2537272
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaacca 243  Q
    ||||||||||||||||||||||| |||  ||||||||| ||||||||||| |||||||||||| |||||||||    
T  2537200 gaatgattttctcattttcaataccaacaaaaatatctctctctatataagtaactaaacaataatttaacca 2537272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 289
Target Start/End: Original strand, 12585655 - 12585810
Alignment:
Q  134 aattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaat 233  Q
    ||||||||| || || || || |||| ||||||  | |||||||||||||||||||||| ||||| ||||| ||| ||||||||||| |||||| |||||    
T  12585655 aattgtcctctacgacttgtcatattttggaaatatcgaatgattttctcattttcaatctcaataaaaatctctctctctatataagtaactagacaat 12585754  T
Q  234 gatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcata 289  Q
     ||||||||| | |||   ||||  |||||||| | || |||||||||| ||||||    
T  12585755 catttaaccattgatcacccattcaatttcgcaactgagtcttgataatcttcata 12585810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 304 - 387
Target Start/End: Original strand, 1336280 - 1336363
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactatt 387  Q
    ||||||||||||||||||| |||| |||| | ||||||||| ||| ||||||||| ||  |||||||||||||| |||||||||    
T  1336280 tttgagatatatgatgataagtgtgggccaagagagaaatgttttgtgataagtgtggttcatgtgatcaaaatgtcaactatt 1336363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 238
Target Start/End: Original strand, 16340159 - 16340319
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcacatttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatg 175  Q
    |||||||||| |||||||||| | |||  ||||  | | ||||| || ||||| ||||||| ||| | ||  ||| ||| ||||| |||||||  |||||    
T  16340159 gacggatccaagatttttgaacaatggaggcactataaaaaaaaattgtagcattaataatagtcttctacaattattcatattacggaaactgtgaatg 16340258  T
Q  176 attttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgattt 238  Q
    ||||||| ||||||||||||||| |||| |  | ||||| |||||||||||||||||| ||||    
T  16340259 attttcttattttcaatatcaataaaaaaa--tatctctgtataaataactaaacaatcattt 16340319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 6004944 - 6004977
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||||||||||||||||    
T  6004944 gagaaatgatatttgtacaactactttgtgacaa 6004977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 1796496 - 1796532
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  1796496 gagaaatgatatttgtacaaccactttgtgacaactt 1796532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 5502371 - 5502407
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5502371 gagaaatgatatttgtacaaccactttgtgacaactt 5502407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 12732842 - 12732878
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  12732842 gagaaatgatatttgtacaaccactttgtgacaactt 12732878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 22852910 - 22852874
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22852910 gagaaatgatatttgtacaaccactttgtgacaactt 22852874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 28927681 - 28927717
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  28927681 gagaaatgatatttgtacaaccactttgtgacaactt 28927717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 36497661 - 36497697
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  36497661 gagaaatgatatttgtacaactattttgtgacaactt 36497697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 45101396 - 45101432
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  45101396 gagaaatgatatttgtacaaccactttgtgacaactt 45101432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 278
Target Start/End: Complemental strand, 15356162 - 15356060
Alignment:
Q  176 attttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattct 275  Q
    ||||||||||| |||||| ||| |||| | | | ||||||||||| ||||||||||||  ||||| || ||||||  |||  ||||| ||||| ||||||    
T  15356162 attttctcattatcaataccaacgaaagtgtatctctctatataagtaactaaacaattgtttaatcattcatctcccatacgattttgcatctgattct 15356063  T
Q  276 tga 278  Q
    |||    
T  15356062 tga 15356060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 11138910 - 11138943
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| |||||||||||||    
T  11138910 aaatgatatttgtacaactattttgtgacaactt 11138943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 27836183 - 27836216
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||| |||||||||||||||    
T  27836183 aaatgatatttgtacaaccactttgtgacaactt 27836216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 42047335 - 42047368
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    |||||||||||||||||||||||||||| |||||    
T  42047335 gagaaatgatatttgtacaactactttgggacaa 42047368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 43419879 - 43419912
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||||| ||||||||||    
T  43419879 gagaaatgatatttgtacaactaatttgtgacaa 43419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 1065417 - 1065453
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  1065417 gagaaatgatatttgtacaaccaatttgtgacaactt 1065453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 1370345 - 1370309
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  1370345 gagaaatgatatttgtacaaccactttgtaacaactt 1370309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 5740845 - 5740809
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  5740845 gagaaatgatatttgtacaaccactttttgacaactt 5740809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 7596962 - 7596926
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||  |||||||||||||||    
T  7596962 gagaaatgatatttgtacaatcactttgtgacaactt 7596926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 7678732 - 7678768
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  7678732 gagaaatgatatttgtacaaccactttttgacaactt 7678768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 8143280 - 8143244
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  8143280 gagaaataatatttgtacaactattttgtgacaactt 8143244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 9047130 - 9047094
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  9047130 gagaaatgatatttgtacaaccactttttgacaactt 9047094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 13267157 - 13267121
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||| |||| |||||||||||||||    
T  13267157 gagaaatgatatttgttcaaccactttgtgacaactt 13267121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 20288533 - 20288569
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  20288533 gagaaatgatatttgtacaaccaatttgtgacaactt 20288569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 21075162 - 21075198
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  21075162 gagaaatgatatttgtacaaccaatttgtgacaactt 21075198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 21273781 - 21273745
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  21273781 gagaaatgatatttgtacaaccattttgtgacaactt 21273745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 26629181 - 26629145
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  26629181 gagaaatgatatttgtacaaccactttttgacaactt 26629145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 30170800 - 30170764
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  30170800 gagaaatgatatttgtacaaccactttttgacaactt 30170764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 37524488 - 37524452
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||  |||||||||||||||    
T  37524488 gagaaatgatatttgtacaagcactttgtgacaactt 37524452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 37562212 - 37562176
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| | |||||||||||    
T  37562212 gagaaatgatatttgtacaactattatgtgacaactt 37562176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 38844861 - 38844825
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  38844861 gagaaatgatatttgtacaaccattttgtgacaactt 38844825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 365 - 401
Target Start/End: Original strand, 40381827 - 40381863
Alignment:
Q  365 atgtgatcaaaatatcaactattagtgcattatacta 401  Q
    ||||||||||||||||||||||| || ||||||||||    
T  40381827 atgtgatcaaaatatcaactattggtacattatacta 40381863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 40413409 - 40413373
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| || |||||||||||||    
T  40413409 gagaaatgatatttgtacaattattttgtgacaactt 40413373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 40842014 - 40842050
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  40842014 gagaaatgatatttgtacaaccactttgtgataactt 40842050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 41746820 - 41746856
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| | |||||||||||    
T  41746820 gagaaatgatatttgtacaactaatctgtgacaactt 41746856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 118; Significance: 5e-60; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 76 - 387
Target Start/End: Original strand, 27850394 - 27850707
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgca-catttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||| |||||||||||| || | ||| ||| ||| ||||||| ||| | |||||||| |||| ||| ||||||| | |||||||||||| ||||    
T  27850394 gacggatccaagatttttgaataatgagggcatcatatatgaaaatttgtagtattaataattctcctctataatttttcattttatggaaactttgaat 27850493  T
Q  175 gattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattc 274  Q
    ||| || ||||||||||||| ||| ||||| |||||| ||||||||||||||||||||| |||||||  ||||| ||  ||| | ||| |||||| ||||    
T  27850494 gatattatcattttcaatattaataaaaatgtctttcactatataaataactaaacaatcatttaactgatcatattatattcgcttttgcatccaattc 27850593  T
Q  275 ttgataatattcatatttttaag-aaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatca 373  Q
    ||||||||||||||||| | ||| ||| ||||||| |||||| |||||| |||| |||| |||||||||| |||||||||||||| ||  |||||| |||    
T  27850594 ttgataatattcatattatcaagaaaaaaatttgatatatataatgataagtgtgggccaaaagagaaataatttatgataagtgtggtacatgtggtca 27850693  T
Q  374 aaatatcaactatt 387  Q
    |||||| |||||||    
T  27850694 aaatataaactatt 27850707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 120 - 350
Target Start/End: Original strand, 30294091 - 30294321
Alignment:
Q  120 tttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatata 219  Q
    |||||| || ||||||||||| | ||  ||||||| |||||||||||||| ||||| |||||| ||||| || |||||| ||||||||||| | ||||||    
T  30294091 tttataacattaataattgtcttctacaatttttcatattatggaaactttgaatggttttcttattttgaaaatcaataaaaatatctttttttatata 30294190  T
Q  220 aataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatgatg 319  Q
    ||||||||||||||  ||||||| ||||||| ||||| ||||||||||| |||||||||||||||||||| | | |||||||||||| ||||||||||||    
T  30294191 aataactaaacaatcttttaaccgatcatctctcattcgatttcgcatcagattcttgataatattcatactatcaagaaagaatttaagatatatgatg 30294290  T
Q  320 atatgtgtaggccgaaagagaaatgatttat 350  Q
    ||||||||||  | |||||||||| ||||||    
T  30294291 atatgtgtagatcaaaagagaaataatttat 30294321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 173 - 397
Target Start/End: Complemental strand, 21487530 - 21487306
Alignment:
Q  173 atgattttctcattttcaatatcaatg-------aaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgc 265  Q
    ||||||||||||||||||||||||||        ||||||| ||| ||||||||||||| |||||||| |||||||  ||||||| |||||||||||  |    
T  21487530 atgattttctcattttcaatatcaatatcaataaaaaatatttttatctatataaataattaaacaatcatttaactgatcatctctcatttgattttac 21487431  T
Q  266 atccgattcttgataatattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggcca 365  Q
    ||| |||     |||||||||||||| | || |||||||||||||||| ||||||||||||| | || ||||||||||||||| ||| ||||| || |||    
T  21487430 atctgat-----ataatattcatattatcaaaaaagaatttgagatat-tgatgatatgtgtggaccaaaagagaaatgatttgtgagaagtgtggacca 21487337  T
Q  366 tgtgatcaaaatatcaactattagtgcattat 397  Q
    |||| |||||||||||||| || |||||||||    
T  21487336 tgtggtcaaaatatcaact-ttggtgcattat 21487306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 143 - 250
Target Start/End: Original strand, 37244915 - 37245022
Alignment:
Q  143 ttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaacc 242  Q
    |||||||||||| | ||||| |||||| ||||||||||| ||||||| |||||||| |||||||  ||||| |||||||||| |||||||| |||||||     
T  37244915 ttatgatttttcattttatgaaaactttgaatgattttcacattttcgatatcaataaaaatattgttctcaatataaataattaaacaatcatttaacg 37245014  T
Q  243 aatcatct 250  Q
    ||||||||    
T  37245015 aatcatct 37245022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 76 - 174
Target Start/End: Complemental strand, 46396719 - 46396620
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||||||||||||||||||||| |||| || ||||||||||| ||||| ||||||||||||| || |||| ||| |||||| ||||||| ||||    
T  46396719 gacggatccaggatttttgaatagtgggggcactatatataaaaatttgtagcattaataattgtcctctacgattattcatattattgaaactttgaat 46396620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 304 - 401
Target Start/End: Complemental strand, 46396541 - 46396444
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatacta 401  Q
    ||||||||||||||||||| |||| |||| | ||||||||||||| ||||||||| |  ||||||||||||||| |||||||||  | ||||||||||    
T  46396541 tttgagatatatgatgataagtgtgggccaagagagaaatgatttctgataagtgtgatccatgtgatcaaaatgtcaactattgatacattatacta 46396444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 214 - 285
Target Start/End: Original strand, 5200333 - 5200404
Alignment:
Q  214 tatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatatt 285  Q
    |||||||||||||||||||| |||||| ||||||||| |||||||||||| |||  ||||||||||||||||    
T  5200333 tatataaataactaaacaattatttaatcaatcatctctcatttgatttcacatttgattcttgataatatt 5200404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 298 - 401
Target Start/End: Original strand, 42773370 - 42773473
Alignment:
Q  298 aaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattat 397  Q
    |||||||||||| |||||||||||||||||  ||| ||||||||||||||| | | ||| |  ||| ||||| ||||||||||||||||| || ||||||    
T  42773370 aaagaatttgagttatatgatgatatgtgtgtgccaaaagagaaatgatttgtaagaagagtaggctatgtggtcaaaatatcaactattggtacattat 42773469  T
Q  398 acta 401  Q
    ||||    
T  42773470 acta 42773473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 1282175 - 1282277
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||||||||||||||||||||| |||| || ||||||||| | ||||| ||||||||||| | ||  ||| ||| |||||||||||||| ||||    
T  1282175 gacggatccaggatttttgaatagtgggggcactatatataaaaatctgtagcattaataattgtcatctacaattattcatattatggaaactttgaat 1282274  T
Q  175 gat 177  Q
    |||    
T  1282275 gat 1282277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 1283206 - 1283308
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||||||||||||||||||||| |||| || ||||||||| | ||||| ||||||||||| | ||  ||| ||| |||||||||||||| ||||    
T  1283206 gacggatccaggatttttgaatagtgggggcactatatataaaaatctgtagcattaataattgtcatctacaattattcatattatggaaactttgaat 1283305  T
Q  175 gat 177  Q
    |||    
T  1283306 gat 1283308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 171 - 231
Target Start/End: Complemental strand, 29095902 - 29095842
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaaca 231  Q
    |||||||||||||||||||||| ||||| |||| |||||||||||| ||| ||||||||||    
T  29095902 gaatgattttctcattttcaatctcaataaaaacatctttctctatgtaagtaactaaaca 29095842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 298 - 387
Target Start/End: Original strand, 37245038 - 37245128
Alignment:
Q  298 aaagaatttgagatatatgatgatatgtgtaggccgaa-agagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactatt 387  Q
    |||| |||||||||||||||| |||| ||| || | || ||||||||||||||||||||||| ||  |||||||||||||| |||| ||||    
T  37245038 aaagtatttgagatatatgattatatatgtggggctaagagagaaatgatttatgataagtgtggatcatgtgatcaaaatgtcaaatatt 37245128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 412 - 446
Target Start/End: Original strand, 10384211 - 10384245
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaac 446  Q
    |||||||||||||||||||||||||||||||||||    
T  10384211 gagaaatgatatttgtacaactactttgtgacaac 10384245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 201 - 238
Target Start/End: Original strand, 42772340 - 42772377
Alignment:
Q  201 aaatatctttctctatataaataactaaacaatgattt 238  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  42772340 aaatatctttctctatataaataactaaacaatcattt 42772377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 5309111 - 5309075
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  5309111 gagaaatgatatttgtacaaccactttgtgacaactt 5309075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 6829854 - 6829818
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  6829854 gagaaatgatatttgtacaactaatttgtgacaactt 6829818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 7503470 - 7503506
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||| ||||||||||||||||||||    
T  7503470 gagaaatgatatttgtccaactactttgtgacaactt 7503506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 8391398 - 8391362
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8391398 gagaaatgatatttgtacaactactttgtgagaactt 8391362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 18610773 - 18610809
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  18610773 gagaaatgatatttgtacaactattttgtgacaactt 18610809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 29293959 - 29293995
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||||||| |||||||||    
T  29293959 gagaaatgatatttgtacaactactttatgacaactt 29293995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 32821635 - 32821671
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  32821635 gagaaatgatatttgtacaaccactttgtgacaactt 32821671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 37843503 - 37843467
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||||||| |||||||||    
T  37843503 gagaaatgatatttgtacaactactttttgacaactt 37843467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 45740615 - 45740579
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  45740615 gagaaatgatatttgtacaaccactttgtgacaactt 45740579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 49425738 - 49425774
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  49425738 gagaaatgatatttgtacaaccactttgtgacaactt 49425774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 49453491 - 49453527
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  49453491 gagaaatgatatttgtacaaccactttgtgacaactt 49453527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 50226950 - 50226914
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  50226950 gagaaatgatatttgtacaaccactttgtgacaactt 50226914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 223 - 290
Target Start/End: Original strand, 42772392 - 42772459
Alignment:
Q  223 aactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcatat 290  Q
    ||||||||||| ||||||   ||||||| ||||| |||| ||  ||||||||||||||||||||||||    
T  42772392 aactaaacaatcatttaattgatcatctctcattcgattccgtgtccgattcttgataatattcatat 42772459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 446
Target Start/End: Complemental strand, 25302714 - 25302680
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaac 446  Q
    ||||||||||||||||||||| |||||||||||||    
T  25302714 gagaaatgatatttgtacaaccactttgtgacaac 25302680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 1282281 - 1282354
Alignment:
Q  210 tctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataata 283  Q
    |||||||| ||||||||||||||| ||||||||| |||||    | |||||||||||||  |||||| ||||||    
T  1282281 tctctataaaaataactaaacaatcatttaaccagtcatcccctacttgatttcgcatctaattcttaataata 1282354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 1282356 - 1282452
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatacta 401  Q
    |||||||||||||| || | |||| |||| | | ||||||||||| ||||||||| |   ||||||||| |||| |||||||||| | ||||||||||    
T  1282356 tttgagatatatgacgacaagtgtgggccaagatagaaatgatttgtgataagtgtgattcatgtgatc-aaatgtcaactattaatacattatacta 1282452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 1283312 - 1283385
Alignment:
Q  210 tctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataata 283  Q
    |||||||| ||||||||||||||| ||||||||| |||||    | |||||||||||||  |||||| ||||||    
T  1283312 tctctataaaaataactaaacaatcatttaaccagtcatcccctacttgatttcgcatctaattcttaataata 1283385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 1283387 - 1283483
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatacta 401  Q
    |||||||||||||| || | |||| |||| | | ||||||||||| ||||||||| |   ||||||||| |||| |||||||||| | ||||||||||    
T  1283387 tttgagatatatgacgacaagtgtgggccaagatagaaatgatttgtgataagtgtgattcatgtgatc-aaatgtcaactattaatacattatacta 1283483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 5477220 - 5477187
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||| |||||||||||||||    
T  5477220 aaatgatatttgtacaaccactttgtgacaactt 5477187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 446
Target Start/End: Complemental strand, 9882729 - 9882696
Alignment:
Q  413 agaaatgatatttgtacaactactttgtgacaac 446  Q
    |||||||||||||||||||||| |||||||||||    
T  9882729 agaaatgatatttgtacaactattttgtgacaac 9882696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 31428028 - 31427995
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  31428028 gagaaatgatatttgtacaaccactttgtgacaa 31427995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 31570581 - 31570500
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatcttt 252  Q
    |||||||| | ||||||| |||| |||  ||||||| | |||||||||||||||||||| |||  |||||||| | ||||||    
T  31570581 gaatgattatttcatttttaataacaacaaaaatatttctctctatataaataactaaataattttttaaccatttatcttt 31570500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 7078571 - 7078535
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| ||| |||||||||||||    
T  7078571 gagaaatgatatttgtacatctattttgtgacaactt 7078535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 8934667 - 8934631
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  8934667 gagaaattatatttgtacaactattttgtgacaactt 8934631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 9011645 - 9011681
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  9011645 gagaaatgatatttgtacaaccattttgtgacaactt 9011681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 13813558 - 13813594
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  13813558 gagaaatgatatttgtacaaccaatttgtgacaactt 13813594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 15061845 - 15061881
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  15061845 gagaaatgatatttgtataaccactttgtgacaactt 15061881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 16658438 - 16658474
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| || ||||||||||||    
T  16658438 gagaaatgatatttgtacaaccacattgtgacaactt 16658474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 25098859 - 25098823
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  25098859 gagaaatgatatttgtacaaccactttgtaacaactt 25098823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 26585244 - 26585208
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  26585244 gagaaatgatatttgtacaactattttgtgataactt 26585208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 27687579 - 27687543
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  27687579 gagaaatgatatttgtacaaccattttgtgacaactt 27687543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 29264015 - 29264051
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  29264015 gagaaatgatatttgtacaaccactttatgacaactt 29264051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 413 - 445
Target Start/End: Original strand, 32966268 - 32966300
Alignment:
Q  413 agaaatgatatttgtacaactactttgtgacaa 445  Q
    |||||||||||||||||||| ||||||||||||    
T  32966268 agaaatgatatttgtacaaccactttgtgacaa 32966300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 40596114 - 40596078
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  40596114 gagaaatgatatttgtacaaccattttgtgacaactt 40596078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 40612114 - 40612150
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  40612114 gagaaatgatatttgtacaaccattttgtgacaactt 40612150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 41507254 - 41507218
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  41507254 gagaaatgatatttgtacaaccattttgtgacaactt 41507218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 42256460 - 42256496
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  42256460 gagaaatgatatttgtacaaccattttgtgacaactt 42256496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 45272220 - 45272184
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  45272220 gagaaatgatatttgtacaaccactttttgacaactt 45272184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 48872379 - 48872415
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  48872379 gagaaatgatatttgtacaaccactttatgacaactt 48872415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 48873021 - 48872985
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||| |||||| |||||||||||||||    
T  48873021 gagaaatgatatttatacaaccactttgtgacaactt 48872985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 2e-56; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 85 - 401
Target Start/End: Complemental strand, 23756791 - 23756472
Alignment:
Q  85 aggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttat-gatttttcctattatggaaacttagaatgattttct 182  Q
    ||||| ||||||||||||| |||| || |||||||| || ||||| |||||||||||  | || |||||||  |||||||||||||| ||||||||||||    
T  23756791 aggatatttgaatagtgggggcaccatatataaaaagttgtagcattaataattgtctctaattgattttttatattatggaaactttgaatgattttct 23756692  T
Q  183 cattttcaa-tatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataa 281  Q
    ||||||||| ||||||| ||||||| ||| |||||||||| |||||||| || | ||||||| | ||||  || |  |||||||||| ||||||||||||    
T  23756691 cattttcaaatatcaataaaaatatatttttctatataaacaactaaacgatcacttaaccagtaatctcccactaaatttcgcatctgattcttgataa 23756592  T
Q  282 tattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatca 381  Q
    ||||| |||| | |||||||||||||||||||||||||||| |||   ||| ||||||||||||||| |  |||||| ||||||| | |||||||| |||    
T  23756591 tattcgtattatcaagaaagaatttgagatatatgatgataggtgcgtgccaaaagagaaatgatttgtattaagtgtgggccatctcatcaaaatgtca 23756492  T
Q  382 actattagtgcattatacta 401  Q
    ||  || || ||||||||||    
T  23756491 acggttggtacattatacta 23756472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 134 - 289
Target Start/End: Complemental strand, 22973002 - 22972847
Alignment:
Q  134 aattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaat 233  Q
    ||||||||| || || || || |||| ||||||  | |||||||||||||||||||||| ||||| ||||| ||| ||| ||||||| |||||| |||||    
T  22973002 aattgtcctctacgacttgtcatattttggaaatatcgaatgattttctcattttcaatctcaataaaaatctctctctatatataagtaactagacaat 22972903  T
Q  234 gatttaaccaatcatctttcatttgatttcgcatccgattcttgataatattcata 289  Q
     ||||||||| | |||   |||| ||||||||| | || |||||||||| ||||||    
T  22972902 catttaaccattgatcacccattcgatttcgcaactgagtcttgataatcttcata 22972847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 171 - 288
Target Start/End: Complemental strand, 33758512 - 33758395
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccg 270  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||| |||||| |||  ||||||| |||||| || | ||| |||||   ||||| ||||||    
T  33758512 gaataattttctcattttcaatgtcaataaaaatatcattctcaatataagtaatcaaacaattatttaatcatttatccttcatccaatttcacatccg 33758413  T
Q  271 attcttgataatattcat 288  Q
    ||||||||||||| ||||    
T  33758412 attcttgataatactcat 33758395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 2469703 - 2469739
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  2469703 gagaaatgatatttgtacaaccactttgtgacaactt 2469739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 22330691 - 22330655
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  22330691 gagaaatgatatttgtacaaccactttgtgacaactt 22330655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 444
Target Start/End: Original strand, 27778079 - 27778111
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgaca 444  Q
    |||||||||||||||||||||||||||||||||    
T  27778079 gagaaatgatatttgtacaactactttgtgaca 27778111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 37352050 - 37352014
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  37352050 gagaaatgatatttgtacaaccactttgtgacaactt 37352014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 41077571 - 41077535
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||| ||||||||||||||||||||||    
T  41077571 gagaaatgatatttttacaactactttgtgacaactt 41077535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 45607024 - 45607060
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| |||||||||||||||||    
T  45607024 gagaaatgatatttgtacatctactttgtgacaactt 45607060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 412 - 447
Target Start/End: Original strand, 37832450 - 37832485
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaact 447  Q
    ||||||||||||||||||||||| ||||||||||||    
T  37832450 gagaaatgatatttgtacaactattttgtgacaact 37832485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 448
Target Start/End: Original strand, 28596908 - 28596942
Alignment:
Q  414 gaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| |||||||||||||||    
T  28596908 gaaatgatatttgtacaaccactttgtgacaactt 28596942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 414 - 448
Target Start/End: Complemental strand, 32154605 - 32154571
Alignment:
Q  414 gaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||||| ||||||||||||    
T  32154605 gaaatgatatttgtacaactacgttgtgacaactt 32154571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 176 - 233
Target Start/End: Complemental strand, 33338348 - 33338293
Alignment:
Q  176 attttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaat 233  Q
    ||||||||||||||||||||||| ||||||  ||  ||||||||||||| ||||||||    
T  33338348 attttctcattttcaatatcaataaaaata--ttattctatataaataattaaacaat 33338293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 390
Target Start/End: Complemental strand, 46232432 - 46232378
Alignment:
Q  336 agagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagt 390  Q
    ||||||||||||| ||||||||| ||| |||||  ||||||| ||||||||||||    
T  46232432 agagaaatgatttgtgataagtgtgggtcatgtagtcaaaatgtcaactattagt 46232378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 23680095 - 23680062
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| |||||||||||||    
T  23680095 aaatgatatttgtacaactattttgtgacaactt 23680062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 31982057 - 31982090
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  31982057 gagaaatgatatttgtacaaccactttgtgacaa 31982090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 41966332 - 41966365
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  41966332 gagaaatgatatttgtacaaccactttgtgacaa 41966365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 156053 - 156017
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  156053 gagaaatgatatttgtacatccactttgtgacaactt 156017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 1814378 - 1814342
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||| ||||||||    
T  1814378 gagaaatgatatttgtacaactattttgcgacaactt 1814342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 2347130 - 2347094
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  2347130 gagaaatgatatttgtacaaccattttgtgacaactt 2347094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 4971290 - 4971326
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  4971290 gagaaatgatatttgtacaaccattttgtgacaactt 4971326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 7212738 - 7212702
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||||||| | |||||||    
T  7212738 gagaaatgatatttgtacaactactttttcacaactt 7212702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 10591155 - 10591191
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||| ||||||||||||||| |||||||||||||||    
T  10591155 gagaattgatatttgtacaaccactttgtgacaactt 10591191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 19426580 - 19426616
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  19426580 gagaaatgatatttgtacaaccattttgtgacaactt 19426616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 25887594 - 25887630
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  25887594 gagaaatgatatttgtacatccactttgtgacaactt 25887630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 26153646 - 26153682
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  26153646 gagaaatgatatttgtacaactattttatgacaactt 26153682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 27688648 - 27688684
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  27688648 gagaaatgatatttgtataactactatgtgacaactt 27688684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 28109957 - 28109993
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  28109957 gagaaatgatatttgtacaaccactttttgacaactt 28109993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 28824503 - 28824539
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  28824503 gagaaatgatatttgtacaaccactttctgacaactt 28824539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 30864488 - 30864452
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  30864488 gagaaatgatatttgtacaaccaatttgtgacaactt 30864452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 31274600 - 31274564
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  31274600 gagaaatgatatttgtacaaccaatttgtgacaactt 31274564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 33050183 - 33050219
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  33050183 gagaaatgatatttgtacaaccattttgtgacaactt 33050219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 37856225 - 37856189
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  37856225 gagaaatgatatttgtacaaccattttgtgacaactt 37856189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 40693599 - 40693563
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  40693599 gagaaatgatatttgtacaactattttttgacaactt 40693563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 43444635 - 43444671
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  43444635 gagaaatgatatttgtacaaccactttatgacaactt 43444671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 48395248 - 48395284
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  48395248 gagaaatgatatttgtacaaccactttttgacaactt 48395284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 48867001 - 48866965
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  48867001 gagaaatgatatttgtacagccactttgtgacaactt 48866965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 49069249 - 49069285
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  49069249 gagaaatgatatttgtacaaccactttttgacaactt 49069285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 401
Target Start/End: Original strand, 13035532 - 13035747
Alignment:
Q  182 tcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataa 281  Q
    |||||||| |||||||| ||||||| |||||||||||||||||    ||||| ||||||||  ||||||  || | |||||  |||||||||||||||||    
T  13035532 tcattttcgatatcaataaaaatatttttctctatataaataa----acaattatttaaccggtcatctcccactcgatttgacatccgattcttgataa 13035627  T
Q  282 tattcatatttttaagaaagaatttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatca 381  Q
    |||||||||| | ||||||| |||| | ||||||||| ||| |||| |||| | ||| ||||||||| ||||||||| ||| | |||| ||||||| |||    
T  13035628 tattcatattatcaagaaaggatttcatatatatgattataggtgtgggccaagagataaatgatttgtgataagtgtgggtcttgtggtcaaaatgtca 13035727  T
Q  382 actattagtgcattatacta 401  Q
    ||||||  | ||||||||||    
T  13035728 actattcctacattatacta 13035747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 112 - 387
Target Start/End: Complemental strand, 22087913 - 22087635
Alignment:
Q  112 tataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttc 211  Q
    ||||||||||| || ||||||||||| |||| ||||||||||| ||||||| |||||| ||||||||||| |||||||||||||||| ||||||| |||     
T  22087913 tataaaaatttgtaacaataataattatcctctatgatttttcatattatgaaaactttgaatgattttcgcattttcaatatcaataaaaatat-ttta 22087815  T
Q  212 tctatataaataactaaacaatgatttaaccaatcatctttcatttgat-----ttcgcatccgattcttgataatattcatatttttaagaaagaattt 306  Q
    | || || | ||| |||||| | |||||||| || ||||  || |  ||     || |||| | ||||||||||||||||||||| | ||||||  | ||    
T  22087814 tataaat-attaattaaacagtcatttaaccgattatctcccactcaatatcgatttgcattctattcttgataatattcatattatcaagaaatgactt 22087716  T
Q  307 gagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactatt 387  Q
    ||||||||| || ||| ||||  ||| ||||||||||||| | ||||||||| ||| |||||| ||||||| |||||||||    
T  22087715 gagatatataattataggtgtgagccaaaagagaaatgatatgtgataagtgtgggtcatgtggtcaaaatgtcaactatt 22087635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 79 - 283
Target Start/End: Complemental strand, 47552200 - 47551993
Alignment:
Q  79 ggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaatgat 177  Q
    ||||||| ||||||||||||||||| |||| || ||||||||||| || || || ||||| ||||||| |||| ||| |||||||||||||| |||||||    
T  47552200 ggatccatgatttttgaatagtgggagcactatatataaaaatttgtaacattagtaattatcctttacgattattcatattatggaaactttgaatgat 47552101  T
Q  178 tttctcattttcaatatcaatgaaa--atatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattct 275  Q
    ||||||||||||||||||||| |||  | |  ||||||| ||| |||||||||||||| |||||| || ||||||   | ||||||||| |||| ||| |    
T  47552100 tttctcattttcaatatcaataaaaagaaacttttctctgtatgaataactaaacaatcatttaatcagtcatctccgacttgatttcgtatccaatttt 47552001  T
Q  276 tgataata 283  Q
    | ||||||    
T  47552000 tcataata 47551993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 171 - 274
Target Start/End: Original strand, 46732653 - 46732755
Alignment:
Q  171 gaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccg 270  Q
    ||||| |||||||||||||||||||||| ||||||||| | ||||||||||||| |||||||| | ||||||| ||||||  |||||||||||||||| |    
T  46732653 gaatgtttttctcattttcaatatcaat-aaaatatctctttctatataaataattaaacaatcaattaaccagtcatctcccatttgatttcgcatctg 46732751  T
Q  271 attc 274  Q
    ||||    
T  46732752 attc 46732755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 132 - 278
Target Start/End: Original strand, 27907223 - 27907367
Alignment:
Q  132 ataattgtcctttatgatttttcctattatggaaacttagaatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaaca 231  Q
    |||||||||||||| |||| | | |||| || |||  | |||||||||| |||||||||||| |||  |||||||||  |||||||||| ||||||||||    
T  27907223 ataattgtcctttacgattctccatattttgaaaatattgaatgattttttcattttcaataccaacaaaaatatct--ctctatataagtaactaaaca 27907320  T
Q  232 atgatttaaccaatcatctttcatttgatttcgcatccgattcttga 278  Q
    ||  |||||||| ||||||   ||  |||||||||||||||||||||    
T  27907321 attgtttaaccattcatctcctatgcgatttcgcatccgattcttga 27907367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 26333336 - 26333241
Alignment:
Q  80 gatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||| |||||||||||||| || |||| || ||||||||||| ||||| ||||||||||||| || |||| ||| |||||||||||||| ||||    
T  26333336 gatccaagatttttgaatagtcggggcactatatataaaaatttgtagcattaataattgtcctctacgattattcatattatggaaactttgaat 26333241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 258 - 322
Target Start/End: Original strand, 35747008 - 35747072
Alignment:
Q  258 gatttcgcatccgattcttgataatattcatatttttaagaaagaatttgagatatatgatgata 322  Q
    ||||| |||||| ||| ||||||||||||||||| | ||||||| ||||||||||||||||||||    
T  35747008 gattttgcatccaatttttgataatattcatattatcaagaaaggatttgagatatatgatgata 35747072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 304 - 398
Target Start/End: Complemental strand, 47551991 - 47551897
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattata 398  Q
    |||||||||| |||||||| |||  |||| | | ||||||||||| ||||||||| ||  |||||||| ||||| |||||||||||| |||||||    
T  47551991 tttgagatatttgatgataagtgcgggccaagaaagaaatgatttgtgataagtgtggttcatgtgattaaaatgtcaactattagtacattata 47551897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 76 - 289
Target Start/End: Original strand, 13028605 - 13028815
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||| ||||||||||||||| |   || || |||||||| ||  |||| |||||||| |||| || | |||||  ||||||| ||| || ||||    
T  13028605 gacggatccaagatttttgaatagtgaggataccatatataaaaaatttaagcattaataattatcctctacgttttttaatattatgaaaattttgaat 13028704  T
Q  175 gattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattc 274  Q
     |||||||||||||| | || ||| || |||| | |||||||||| ||||    ||||| |||||||   ||||||  || | ||||||  |||||||||    
T  13028705 cattttctcattttcgaaattaataaatatatttatctctatatatataa----acaattatttaactggtcatctaccagtcgatttcatatccgattc 13028800  T
Q  275 ttgataatattcata 289  Q
    |||||||||||||||    
T  13028801 ttgataatattcata 13028815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 51039187 - 51039151
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||||||||||||||||||||    
T  51039187 gagaaatgatatttgtacaactactttgtgacaactt 51039151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 172 - 255
Target Start/End: Complemental strand, 24368092 - 24368009
Alignment:
Q  172 aatgattttctcattttcaatatcaatgaaaatatctttctctatataaataactaaacaatgatttaaccaatcatctttcat 255  Q
    ||||||||||||||||||||| ||||| ||||||||  |||| |||||| ||| |||| ||| | |||| || |||||||||||    
T  24368092 aatgattttctcattttcaatgtcaataaaaatatcactctcaatataagtaaataaataattaattaatcattcatctttcat 24368009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 4896571 - 4896535
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  4896571 gagaaatgatatttgtacaaccactttgtgacaactt 4896535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 6370980 - 6371016
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  6370980 gagaaatgatatttgtacaaccactttgtgacaactt 6371016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 11064160 - 11064124
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11064160 gagaaatgatatttgtacaaccactttgtgacaactt 11064124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 11997685 - 11997721
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  11997685 gagaaatgatatttgtacaaccactttgtgacaactt 11997721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 15596396 - 15596432
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  15596396 gagaaatgatatttgtacaaccactttgtgacaactt 15596432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 22257267 - 22257231
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||| |||||||||||||||||||||    
T  22257267 gagaaatgatatttgaacaactactttgtgacaactt 22257231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 26885291 - 26885327
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  26885291 gagaaatgatatttgtacaaccactttgtgacaactt 26885327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 33093175 - 33093139
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  33093175 gagaaatgatatttgtacaactattttgtgacaactt 33093139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 34116611 - 34116575
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  34116611 gagaaatgatatttgtacaaccactttgtgacaactt 34116575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 35017153 - 35017189
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  35017153 gagaaatgatatttgtacaactattttgtgacaactt 35017189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 37547065 - 37547101
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  37547065 gagaaatgatatttgtacaaccactttgtgacaactt 37547101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 41119541 - 41119505
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  41119541 gagaaatgatatttgtacaaccactttgtgacaactt 41119505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 46173550 - 46173586
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  46173550 gagaaatgatatttgtacaaccactttgtgacaactt 46173586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 47014939 - 47014975
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  47014939 gagaaatgatatttgtacaactattttgtgacaactt 47014975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 401
Target Start/End: Original strand, 13028978 - 13029076
Alignment:
Q  303 atttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatacta 401  Q
    |||| ||||||||||| |||  ||| | || | ||| ||||||||| ||||||||| ||  |||||| ||||||| ||||||||| || ||||||||||    
T  13028978 atttcagatatatgattatagatgtggaccaagagataaatgatttgtgataagtgtggatcatgtggtcaaaatgtcaactattcgtacattatacta 13029076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Complemental strand, 940330 - 940297
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||||| ||||||||||    
T  940330 gagaaatgatatttgtacaactattttgtgacaa 940297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 173 - 239
Target Start/End: Complemental strand, 6495814 - 6495746
Alignment:
Q  173 atgattttctcattttcaatatcaatgaaaatatctttctc--tatataaataactaaacaatgattta 239  Q
    |||||||||||||||| | | ||||| ||||||||| ||||  ||||||| |||||||||||| |||||    
T  6495814 atgattttctcatttttagtctcaataaaaatatctctctctatatataagtaactaaacaatcattta 6495746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 12638825 - 12638858
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||||||||||| ||||    
T  12638825 gagaaatgatatttgtacaactactttgtaacaa 12638858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 412 - 445
Target Start/End: Original strand, 26440676 - 26440709
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaa 445  Q
    ||||||||||||||||||||| ||||||||||||    
T  26440676 gagaaatgatatttgtacaaccactttgtgacaa 26440709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 48326555 - 48326588
Alignment:
Q  415 aaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||| |||||||||||||||    
T  48326555 aaatgatatttgtacaaccactttgtgacaactt 48326588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 169573 - 169537
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  169573 gagaaatgatatttgtacaaccattttgtgacaactt 169537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 1031755 - 1031791
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  1031755 gagaaatgatatttgtacaaccactttgtgataactt 1031791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 1796366 - 1796402
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  1796366 gagaaatgatatttgtacaaccaatttgtgacaactt 1796402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 5208398 - 5208362
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  5208398 gagaaatgatatttgtacaaccaatttgtgacaactt 5208362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 6290462 - 6290498
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  6290462 gagaaatgatatttgtacaactattttgtaacaactt 6290498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 6953459 - 6953423
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  6953459 gagaaatgatatttgtacatccactttgtgacaactt 6953423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 7037555 - 7037519
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  7037555 gagaaatgatatttgtacaaccaatttgtgacaactt 7037519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 8455861 - 8455897
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||| |||||||||||||| |||||||||||||    
T  8455861 gagaaatgttatttgtacaactattttgtgacaactt 8455897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 23347775 - 23347811
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  23347775 gagaaatgatatttgtacatccactttgtgacaactt 23347811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 27001480 - 27001444
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  27001480 gagaaatgatatttgtacaaccaatttgtgacaactt 27001444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 30042134 - 30042170
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  30042134 gagaaatgatatttgtacaaccattttgtgacaactt 30042170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 30973597 - 30973633
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  30973597 gagaaatgatatttgtacaaccactttatgacaactt 30973633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 31240648 - 31240684
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  31240648 gagaaatgatatttgtacaaccactttgtgataactt 31240684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 32365727 - 32365691
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  32365727 gagaaatgatatttgtacaaccattttgtgacaactt 32365691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 33278675 - 33278711
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  33278675 gagaaatgatatttgaacaactattttgtgacaactt 33278711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 38864807 - 38864771
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| || |||||||||||||    
T  38864807 gagaaatgatatttgtacaattattttgtgacaactt 38864771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 39010208 - 39010172
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  39010208 gagaaatgatatttgtacaaccattttgtgacaactt 39010172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 39241361 - 39241325
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  39241361 gagaaatgatatttgtacaaccaatttgtgacaactt 39241325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 444
Target Start/End: Complemental strand, 40409237 - 40409205
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgaca 444  Q
    ||||||||||||||||||| |||||||||||||    
T  40409237 gagaaatgatatttgtacatctactttgtgaca 40409205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 41262689 - 41262653
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| || |||||||||||||    
T  41262689 gagaaatgatatttgtacaattattttgtgacaactt 41262653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 41495013 - 41495049
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| | |||||||||||    
T  41495013 gagaaatgatatttgtacaactattatgtgacaactt 41495049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 42490920 - 42490956
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  42490920 gagaaatgatatttgtacaaccactttttgacaactt 42490956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 42815404 - 42815440
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  42815404 gagaaatgatatttgtacaactattttgtaacaactt 42815440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 42853939 - 42853975
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  42853939 gagaaatgatatttgtacaactattttttgacaactt 42853975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 44272881 - 44272845
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| ||| |||||||||    
T  44272881 gagaaatgatatttgtacaactattttttgacaactt 44272845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 46566929 - 46566965
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  46566929 gagaaatgatatttgtacatccactttgtgacaactt 46566965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 46794572 - 46794536
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  46794572 gagaaatgatatttgtacaaccactttctgacaactt 46794536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 48099811 - 48099847
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||| |||||| |||||||||||||||    
T  48099811 gagaaatgatatttatacaaccactttgtgacaactt 48099847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 50831827 - 50831791
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  50831827 gagaaatgatatttgtacaaccactttttgacaactt 50831791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 51318703 - 51318739
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  51318703 gagaaatgatatttgtacaaccactttgtgataactt 51318739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 51359861 - 51359825
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  51359861 gagaaatgatatttgtacaaccattttgtgacaactt 51359825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 51377364 - 51377328
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  51377364 gagaaatgatatttgtacaaccaatttgtgacaactt 51377328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 51389145 - 51389109
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  51389145 gagaaatgatatttgtacaaccactttgtaacaactt 51389109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 51717353 - 51717317
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  51717353 gagaaatgatatttgtacaaccaatttgtgacaactt 51717317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 52392296 - 52392260
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| | |||||||||||||||    
T  52392296 gagaaatgatatttgtacatccactttgtgacaactt 52392260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 54036589 - 54036553
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  54036589 gagaaatgatatttgtacaaccattttgtgacaactt 54036553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 54800998 - 54801034
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||||||| |||||    
T  54800998 gagaaatgatatttgtacaaccactttgtgataactt 54801034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 55268072 - 55268036
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| | |||||||||||||    
T  55268072 gagaaatgatatttgtacaaccaatttgtgacaactt 55268036  T

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Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 56215605 - 56215641
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  56215605 gagaaatgatatttgtacaaccactttttgacaactt 56215641  T

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Target: scaffold0245 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 7855 - 7957
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||||||||||||||||||||| |||| || ||||||||| | ||||| ||||||||||| | ||  ||| ||| |||||||||||||| ||||    
T  7855 gacggatccaggatttttgaatagtgggggcactatatataaaaatctgtagcattaataattgtcatctacaattattcatattatggaaactttgaat 7954  T
Q  175 gat 177  Q
    |||    
T  7955 gat 7957  T

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Target: scaffold0245; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 7961 - 8034
Alignment:
Q  210 tctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataata 283  Q
    |||||||| ||||||||||||||| ||||||||| |||||    | |||||||||||||  |||||| ||||||    
T  7961 tctctataaaaataactaaacaatcatttaaccagtcatcccctacttgatttcgcatctaattcttaataata 8034  T

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Target: scaffold0245; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 8036 - 8132
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatacta 401  Q
    |||||||||||||| || | |||| |||| | | ||||||||||| ||||||||| |   ||||||||| |||| |||||||||| | ||||||||||    
T  8036 tttgagatatatgacgacaagtgtgggccaagatagaaatgatttgtgataagtgtgattcatgtgatc-aaatgtcaactattaatacattatacta 8132  T

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Target: scaffold0229 (Bit Score: 47; Significance: 1e-17; HSPs: 3)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 76 - 177
Target Start/End: Original strand, 8183 - 8285
Alignment:
Q  76 gacggatccaggatttttgaatagtgggtgcac-atttataaaaatttatagcaataataattgtcctttatgatttttcctattatggaaacttagaat 174  Q
    |||||||||||||||||||||||||||| |||| || ||||||||| | ||||| ||||||||||| | ||  ||| ||| |||||||||||||| ||||    
T  8183 gacggatccaggatttttgaatagtgggggcactatatataaaaatctgtagcattaataattgtcatctacaattattcatattatggaaactttgaat 8282  T
Q  175 gat 177  Q
    |||    
T  8283 gat 8285  T

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Target: scaffold0229; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 210 - 283
Target Start/End: Original strand, 8289 - 8362
Alignment:
Q  210 tctctatataaataactaaacaatgatttaaccaatcatctttcatttgatttcgcatccgattcttgataata 283  Q
    |||||||| ||||||||||||||| ||||||||| |||||    | |||||||||||||  |||||| ||||||    
T  8289 tctctataaaaataactaaacaatcatttaaccagtcatcccctacttgatttcgcatctaattcttaataata 8362  T

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Target: scaffold0229; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 401
Target Start/End: Original strand, 8364 - 8460
Alignment:
Q  304 tttgagatatatgatgatatgtgtaggccgaaagagaaatgatttatgataagtgggggccatgtgatcaaaatatcaactattagtgcattatacta 401  Q
    |||||||||||||| || | |||| |||| | | ||||||||||| ||||||||| |   ||||||||| |||| |||||||||| | ||||||||||    
T  8364 tttgagatatatgacgacaagtgtgggccaagatagaaatgatttgtgataagtgtgattcatgtgatc-aaatgtcaactattaatacattatacta 8460  T

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Target: scaffold0662 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0662
Description:

Target: scaffold0662; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 1078 - 1114
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  1078 gagaaatgatatttgtacaactattttgtgacaactt 1114  T

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Target: scaffold0508 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 11607 - 11571
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||| |||||||||||||||||    
T  11607 gagaaatgatatttgtacatctactttgtgacaactt 11571  T

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Target: scaffold0154 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 19762 - 19726
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||| |||||||||||||    
T  19762 gagaaatgatatttgtacaactattttgtgacaactt 19726  T

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Target: scaffold0026 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 113625 - 113661
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  113625 gagaaatgatatttgtacaaccactttgtgacaactt 113661  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Complemental strand, 219735 - 219699
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||| |||||||||||||||    
T  219735 gagaaatgatatttgtacaaccactttgtgacaactt 219699  T

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Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 440718 - 440754
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtgacaactt 448  Q
    ||||||||||||||||||||||||||| |||||||||    
T  440718 gagaaatgatatttgtacaactactttatgacaactt 440754  T

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Target: scaffold0131 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 448
Target Start/End: Complemental strand, 15604 - 15569
Alignment:
Q  413 agaaatgatatttgtacaactactttgtgacaactt 448  Q
    |||||||||||||||||||| |||||||||||||||    
T  15604 agaaatgatatttgtacaaccactttgtgacaactt 15569  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 412 - 442
Target Start/End: Original strand, 36002 - 36032
Alignment:
Q  412 gagaaatgatatttgtacaactactttgtga 442  Q
    |||||||||||||||||||||||||||||||    
T  36002 gagaaatgatatttgtacaactactttgtga 36032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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