View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11148_low_35 (Length: 228)
Name: NF11148_low_35
Description: NF11148
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11148_low_35 |
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Alignment Details
Target: chr5 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 18 - 219
Target Start/End: Original strand, 8584764 - 8584965
Alignment:
| Q |
18 |
attaggaataacttgagctaatacatgagggctagcaaatttcacatatcttcttttttgaattgtttcctcatcatcaacaccatcatcattttgggtt |
117 |
Q |
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| T |
8584764 |
attaggaataacttgagctaatacatgagggctagcaaatttcacatatcttcttttttgaattgtttcctcatcatcaacaccatcatcattttgtgtt |
8584863 |
T |
|
| Q |
118 |
ttgatttccacattggttccgttcgcgatgaacttgatgtcttcgtttgtctctggaatatcacgtcgttgaagcaacttcaactctcttgcctttgctt |
217 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| || |
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| T |
8584864 |
ttgatttccacattggttccgttcgcaatgaacttgatgtcttcgtttgtctctggaatatcacgtcgttgaagcaacttccactctcttgcctttgttt |
8584963 |
T |
|
| Q |
218 |
ct |
219 |
Q |
| |
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|| |
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| T |
8584964 |
ct |
8584965 |
T |
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