View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1114_high_117 (Length: 211)
Name: NF1114_high_117
Description: NF1114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1114_high_117 |
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Alignment Details
Target: chr4 (Bit Score: 92; Significance: 7e-45; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 52 - 186
Target Start/End: Original strand, 327890 - 328023
Alignment:
| Q |
52 |
agaataccacaatttagaatttattttttaaagaaattattgttagtannnnnnnnnctttcatcaatgtctgatgattaattgtgtaattaactattaa |
151 |
Q |
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| T |
327890 |
agaataccacaatttagaattt-ttttttaaagaaattattgttagtatttttttttctttcatcaatgtctgatgattaattgtgtaattaactattaa |
327988 |
T |
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| Q |
152 |
tggaaaaattaatggatgaatgaatgcagaataat |
186 |
Q |
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||||| |||||||||||||||||||||||||||| |
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| T |
327989 |
tggaatgattaatggatgaatgaatgcagaataat |
328023 |
T |
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