View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1114_high_79 (Length: 290)
Name: NF1114_high_79
Description: NF1114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1114_high_79 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 30 - 279
Target Start/End: Original strand, 6324310 - 6324557
Alignment:
| Q |
30 |
tatatatgcggaggaaaatgcttgattagttgatgagaaaaatgcttggggtaggaaatgaaaatatgtggctggaaaatacaaatcaaggctggaatcc |
129 |
Q |
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| T |
6324310 |
tatatatgcggaggaaaatactt--ttagttgatgagaaaaatgcttggggtaggaaatgaaaatatgtggctggaaaatacaaatcaaggctggaatcc |
6324407 |
T |
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| Q |
130 |
atggctaaacacttcccattttaagtgaagaagaaaatgcgtggaattgggttgaactgggaatacttaattacctgggaattcttaagtttgtgacgca |
229 |
Q |
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| T |
6324408 |
atggctaaacacttctcattttaagtgaagaagaaaatgcgtggaattgggttgaactgggaatacttaattacctgggaattcttaagtttgtgacgca |
6324507 |
T |
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| Q |
230 |
agaaatgcgtgacaaaataaagataaaagaaaatgaaaatgtatagtata |
279 |
Q |
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| T |
6324508 |
agaaatgcgtgacaaaataaagataaaagaaaatgaaaatgtatagtata |
6324557 |
T |
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