View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1114_low_152 (Length: 251)
Name: NF1114_low_152
Description: NF1114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1114_low_152 |
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Alignment Details
Target: chr1 (Bit Score: 243; Significance: 1e-135; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 243; E-Value: 1e-135
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 7258095 - 7258337
Alignment:
| Q |
1 |
ttccatcgccactgaacttgacacagaataccctgtgaacaaaagaagaagattagctgccatagagcaagataagaatatttccataaactcgacacaa |
100 |
Q |
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| T |
7258095 |
ttccatcgccactgaacttgacacagaataccctgtgaacaaaagaagaagattagctgccatagagcaagataagaatatttccataaactcgacacaa |
7258194 |
T |
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| Q |
101 |
acagcaaaagaaatcttttaaacagctgaggtatgtatcgttcgaaaagttaagcggacaattaaacacaacagaatgttcagtgcacaatatgtatatt |
200 |
Q |
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| T |
7258195 |
acagcaaaagaaatcttttaaacagctgaggtatgtatcgttcgaaaagttaagcggacaattaaacacaacagaatgttcagtgcacaatatgtatatt |
7258294 |
T |
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| Q |
201 |
gagtgaacctttgcattcttttagtatgataaatctctctgct |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7258295 |
gagtgaacctttgcattcttttagtatgataaatctctctgct |
7258337 |
T |
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