View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1114_low_165 (Length: 215)
Name: NF1114_low_165
Description: NF1114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1114_low_165 |
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| [»] scaffold0288 (1 HSPs) |
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Alignment Details
Target: scaffold0288 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 101
Target Start/End: Original strand, 14630 - 14709
Alignment:
| Q |
22 |
cattcagtcgtcactgcgtctcatttgatgtcggcgaccacctgcagccgcgagtccactaccacaaggttggtcatgta |
101 |
Q |
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| T |
14630 |
cattcagtcgtcactgcatctcatttgatgtcggcgaccacctgcagccgcgaacccactaccacaaggttggtcatgta |
14709 |
T |
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