View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1114_low_177 (Length: 203)
Name: NF1114_low_177
Description: NF1114
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1114_low_177 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 6287105 - 6286903
Alignment:
| Q |
1 |
tgatcccatgagttatatgttggatttatttagagctattgctctcatacatgcttacaagttacaaccaccacaccaaagcatattgcactttatgtga |
100 |
Q |
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| T |
6287105 |
tgatcccatgagttatatgttggatttatttagagctattgctctcatacatgcttacaagttacaaccaccacgccaaagcatattgcactttatgtga |
6287006 |
T |
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| Q |
101 |
gtaatatgtttgatttatatagaattattgctagatatatattatctaaccatttgcttcttatattggtccccctccattagtgtattgatacaataat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6287005 |
gtaatatgtttgatttatatagaattattgctagatatatattatctaaccatttgcttcttatattggtccccctccattagtgtattgatacaataat |
6286906 |
T |
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| Q |
201 |
gtt |
203 |
Q |
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||| |
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| T |
6286905 |
gtt |
6286903 |
T |
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