View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11150_high_18 (Length: 295)
Name: NF11150_high_18
Description: NF11150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11150_high_18 |
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Alignment Details
Target: chr2 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 12909589 - 12909874
Alignment:
| Q |
1 |
caattgtattattttatggattatattgatggcttttaattttccttcatgcttcttttgtgtcctttttaacaactgatagaatcctcaattgtgacac |
100 |
Q |
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| T |
12909589 |
caattgtattcttttatggattatattgatggcttttaattttccttcatgcttcttttgtgtcctttttaacaactgatagaatcctcaattgtgacac |
12909688 |
T |
|
| Q |
101 |
ccttaataataatgtaaaagcaagattcaataaccacatgggagctactgaattgttgtcaccagttactgaaaattttgaaataaatgaaaggtagcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12909689 |
ccttaataataatgtaaaagcaagattcaataaccacatgggagctactgaattgttgtcaccagttactgaaaattttgaaataaatgaaaggtagcat |
12909788 |
T |
|
| Q |
201 |
catcatgtgacaaactttaaaggcacttaccaacaaatgtacaagctttttatgtggtcctttaattcaaccattaattgtctctg |
286 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
12909789 |
catcatgtgacaaactttaaaggcacttaccaacaaatgtacaagctttttatgtggtcctttaattcaaccattaattgtttctg |
12909874 |
T |
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