View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11150_low_6 (Length: 505)

Name: NF11150_low_6
Description: NF11150
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11150_low_6
NF11150_low_6
[»] chr2 (32 HSPs)
chr2 (13-165)||(45693520-45693671)
chr2 (365-493)||(45692566-45692694)
chr2 (258-368)||(45693317-45693427)
chr2 (265-337)||(14714105-14714176)
chr2 (261-331)||(15019030-15019100)
chr2 (136-178)||(15283289-15283331)
chr2 (330-372)||(45692870-45692912)
chr2 (141-178)||(33296110-33296147)
chr2 (265-329)||(3091860-3091923)
chr2 (265-329)||(11164265-11164328)
chr2 (265-329)||(36133093-36133156)
chr2 (265-332)||(12600167-12600233)
chr2 (291-330)||(22195764-22195803)
chr2 (144-178)||(4738611-4738645)
chr2 (144-178)||(5167781-5167815)
chr2 (291-329)||(12962530-12962568)
chr2 (270-323)||(21490781-21490834)
chr2 (144-178)||(36132972-36133006)
chr2 (144-178)||(42283278-42283312)
chr2 (149-178)||(6365189-6365218)
chr2 (145-174)||(12065916-12065945)
chr2 (149-178)||(30856810-30856839)
chr2 (261-330)||(34442228-34442296)
chr2 (141-178)||(35171265-35171302)
chr2 (143-172)||(35965572-35965601)
chr2 (149-178)||(36435684-36435713)
chr2 (149-178)||(41040269-41040298)
chr2 (265-329)||(13104598-13104661)
chr2 (265-329)||(13711180-13711243)
chr2 (142-178)||(29795443-29795479)
chr2 (265-329)||(32750117-32750180)
chr2 (265-325)||(36376744-36376803)
[»] chr3 (34 HSPs)
chr3 (258-329)||(31997914-31997985)
chr3 (265-331)||(29706022-29706087)
chr3 (140-177)||(3483126-3483163)
chr3 (265-329)||(32457642-32457707)
chr3 (142-178)||(108427-108463)
chr3 (281-329)||(20893131-20893179)
chr3 (146-178)||(31997813-31997845)
chr3 (265-329)||(32687848-32687912)
chr3 (258-326)||(49130966-49131033)
chr3 (144-178)||(1901965-1901999)
chr3 (144-178)||(1911411-1911445)
chr3 (144-178)||(5398916-5398950)
chr3 (144-178)||(12792636-12792670)
chr3 (144-178)||(18169155-18169189)
chr3 (144-178)||(20215946-20215980)
chr3 (144-178)||(35272025-35272059)
chr3 (275-329)||(36318169-36318223)
chr3 (136-174)||(43176192-43176230)
chr3 (265-335)||(44365174-44365244)
chr3 (144-178)||(48945845-48945879)
chr3 (272-329)||(7293988-7294044)
chr3 (149-178)||(14957839-14957868)
chr3 (149-178)||(20380928-20380957)
chr3 (149-178)||(34607959-34607988)
chr3 (149-178)||(34733330-34733359)
chr3 (149-178)||(41877650-41877679)
chr3 (149-178)||(51464311-51464340)
chr3 (281-329)||(108564-108612)
chr3 (265-329)||(6126573-6126637)
chr3 (265-329)||(46473247-46473310)
chr3 (281-329)||(46953084-46953131)
chr3 (144-172)||(47723198-47723226)
chr3 (291-331)||(48649725-48649765)
chr3 (281-325)||(51406263-51406307)
[»] chr6 (15 HSPs)
chr6 (261-328)||(21857459-21857525)
chr6 (272-331)||(32853031-32853089)
chr6 (281-329)||(10521257-10521305)
chr6 (281-321)||(24437578-24437618)
chr6 (261-329)||(31480725-31480792)
chr6 (144-178)||(30796114-30796148)
chr6 (292-329)||(1434565-1434602)
chr6 (149-178)||(6435039-6435068)
chr6 (272-329)||(26378274-26378330)
chr6 (141-178)||(31883343-31883380)
chr6 (149-178)||(32457291-32457320)
chr6 (291-332)||(33720155-33720196)
chr6 (265-329)||(1897805-1897868)
chr6 (138-178)||(13093618-13093658)
chr6 (261-329)||(31517069-31517136)
[»] chr8 (38 HSPs)
chr8 (265-338)||(23258151-23258222)
chr8 (291-333)||(9046956-9046998)
chr8 (265-330)||(37101573-37101638)
chr8 (261-331)||(8841149-8841216)
chr8 (265-329)||(11879378-11879442)
chr8 (265-329)||(11896794-11896858)
chr8 (261-332)||(38779134-38779205)
chr8 (281-329)||(39719130-39719178)
chr8 (141-176)||(8841025-8841060)
chr8 (143-178)||(22852878-22852913)
chr8 (260-323)||(27672979-27673041)
chr8 (258-329)||(40413252-40413322)
chr8 (261-328)||(42941577-42941643)
chr8 (291-329)||(295690-295728)
chr8 (265-330)||(3206350-3206415)
chr8 (284-330)||(3650251-3650297)
chr8 (261-330)||(7596779-7596847)
chr8 (144-178)||(28927679-28927713)
chr8 (142-176)||(40842010-40842044)
chr8 (144-178)||(45101394-45101428)
chr8 (149-178)||(1796499-1796528)
chr8 (149-178)||(5502374-5502403)
chr8 (280-329)||(5502496-5502544)
chr8 (149-178)||(12732845-12732874)
chr8 (261-330)||(21418480-21418548)
chr8 (281-330)||(21648818-21648867)
chr8 (149-178)||(27836183-27836212)
chr8 (300-329)||(43403937-43403966)
chr8 (281-329)||(1179511-1179558)
chr8 (261-329)||(5359453-5359520)
chr8 (265-329)||(7678851-7678914)
chr8 (281-329)||(11789906-11789953)
chr8 (281-329)||(14029131-14029179)
chr8 (142-178)||(26629149-26629185)
chr8 (265-329)||(28927800-28927863)
chr8 (144-176)||(32725821-32725853)
chr8 (265-329)||(37524317-37524380)
chr8 (265-329)||(42543369-42543433)
[»] chr5 (30 HSPs)
chr5 (265-330)||(10232618-10232683)
chr5 (265-329)||(5130266-5130330)
chr5 (265-329)||(11306815-11306878)
chr5 (265-329)||(21749477-21749541)
chr5 (265-324)||(34381131-34381189)
chr5 (291-341)||(1774162-1774212)
chr5 (265-331)||(12661833-12661899)
chr5 (265-331)||(24431505-24431570)
chr5 (272-329)||(2117529-2117585)
chr5 (263-328)||(20541219-20541283)
chr5 (143-178)||(23991173-23991208)
chr5 (267-322)||(43482486-43482540)
chr5 (281-335)||(3141630-3141684)
chr5 (144-178)||(6515477-6515511)
chr5 (144-178)||(28811427-28811461)
chr5 (144-178)||(33567251-33567285)
chr5 (281-331)||(40223672-40223722)
chr5 (149-178)||(6865815-6865844)
chr5 (264-333)||(9714020-9714088)
chr5 (265-334)||(12718264-12718332)
chr5 (149-178)||(12910787-12910816)
chr5 (149-178)||(19127127-19127156)
chr5 (149-178)||(34381015-34381044)
chr5 (149-178)||(36713217-36713246)
chr5 (149-178)||(39595275-39595304)
chr5 (265-330)||(39595393-39595457)
chr5 (261-329)||(14323857-14323924)
chr5 (258-330)||(16202832-16202904)
chr5 (265-329)||(20719904-20719967)
chr5 (281-325)||(29227840-29227884)
[»] chr7 (31 HSPs)
chr7 (265-329)||(44894363-44894426)
chr7 (272-330)||(10591278-10591335)
chr7 (261-331)||(40717125-40717195)
chr7 (272-329)||(41966454-41966510)
chr7 (272-329)||(45607150-45607206)
chr7 (142-178)||(22330659-22330695)
chr7 (142-174)||(30180514-30180546)
chr7 (265-329)||(33684799-33684862)
chr7 (261-329)||(37351879-37351946)
chr7 (261-329)||(43445522-43445589)
chr7 (265-332)||(12142003-12142069)
chr7 (143-178)||(41966329-41966364)
chr7 (258-329)||(48866819-48866889)
chr7 (144-178)||(2469701-2469735)
chr7 (261-323)||(7390669-7390730)
chr7 (144-178)||(33223568-33223602)
chr7 (144-178)||(37352018-37352052)
chr7 (272-329)||(155870-155926)
chr7 (141-178)||(4971285-4971322)
chr7 (280-329)||(7807188-7807237)
chr7 (291-328)||(21839023-21839060)
chr7 (141-178)||(27778074-27778111)
chr7 (149-178)||(28596909-28596938)
chr7 (149-178)||(31982060-31982089)
chr7 (141-178)||(37856193-37856230)
chr7 (142-178)||(10591151-10591187)
chr7 (258-314)||(21624408-21624463)
chr7 (281-325)||(22330524-22330568)
chr7 (265-329)||(30180626-30180689)
chr7 (144-176)||(38023465-38023497)
chr7 (272-328)||(47193053-47193108)
[»] chr4 (38 HSPs)
chr4 (261-329)||(30778153-30778220)
chr4 (265-329)||(42915108-42915171)
chr4 (265-329)||(48372114-48372178)
chr4 (265-331)||(28481299-28481364)
chr4 (265-331)||(28482174-28482239)
chr4 (281-331)||(41951670-41951720)
chr4 (265-330)||(28480426-28480490)
chr4 (141-178)||(46173545-46173582)
chr4 (142-178)||(4896539-4896575)
chr4 (265-329)||(31240767-31240831)
chr4 (293-329)||(32713992-32714028)
chr4 (261-327)||(47134729-47134796)
chr4 (147-178)||(48326553-48326584)
chr4 (258-325)||(51389428-51389494)
chr4 (261-331)||(5234358-5234427)
chr4 (265-331)||(41952947-41953013)
chr4 (304-333)||(6309397-6309426)
chr4 (149-178)||(6370983-6371012)
chr4 (149-178)||(11064128-11064157)
chr4 (149-178)||(11997688-11997717)
chr4 (149-178)||(15596399-15596428)
chr4 (149-178)||(26440679-26440708)
chr4 (149-178)||(26885294-26885323)
chr4 (149-178)||(34116579-34116608)
chr4 (149-178)||(37547068-37547097)
chr4 (261-330)||(40409054-40409122)
chr4 (149-178)||(41119509-41119538)
chr4 (141-178)||(46566924-46566961)
chr4 (143-176)||(54800995-54801028)
chr4 (265-333)||(1580167-1580235)
chr4 (265-329)||(4896389-4896452)
chr4 (144-172)||(19899308-19899336)
chr4 (265-329)||(31275265-31275328)
chr4 (265-329)||(36792451-36792515)
chr4 (144-172)||(38844535-38844563)
chr4 (281-329)||(39241191-39241239)
chr4 (144-176)||(51318701-51318733)
chr4 (265-329)||(55927103-55927166)
[»] chr1 (23 HSPs)
chr1 (261-329)||(15061960-15062028)
chr1 (265-329)||(31480023-31480087)
chr1 (264-329)||(2362489-2362551)
chr1 (272-329)||(45740433-45740489)
chr1 (294-338)||(37843315-37843359)
chr1 (142-178)||(50226918-50226954)
chr1 (281-340)||(28703002-28703061)
chr1 (135-178)||(32966256-32966299)
chr1 (144-178)||(25302682-25302716)
chr1 (144-178)||(49453489-49453523)
chr1 (265-329)||(5304719-5304781)
chr1 (149-178)||(5309079-5309108)
chr1 (149-178)||(5477191-5477220)
chr1 (272-329)||(8934423-8934479)
chr1 (149-178)||(31427996-31428025)
chr1 (149-178)||(32821638-32821667)
chr1 (265-330)||(40610348-40610412)
chr1 (149-178)||(45740583-45740612)
chr1 (149-178)||(49425741-49425770)
chr1 (145-178)||(51172344-51172377)
chr1 (137-173)||(26910423-26910459)
chr1 (265-329)||(46948098-46948161)
chr1 (281-329)||(49453612-49453659)
[»] scaffold0148 (2 HSPs)
scaffold0148 (140-178)||(9447-9485)
scaffold0148 (261-339)||(9566-9643)
[»] scaffold0011 (1 HSPs)
scaffold0011 (144-178)||(219703-219737)
[»] scaffold0131 (1 HSPs)
scaffold0131 (149-178)||(15573-15602)
[»] scaffold0026 (1 HSPs)
scaffold0026 (149-178)||(113628-113657)
[»] scaffold0508 (1 HSPs)
scaffold0508 (289-329)||(11425-11465)
[»] scaffold0204 (1 HSPs)
scaffold0204 (261-329)||(27454-27522)
[»] scaffold0036 (1 HSPs)
scaffold0036 (281-329)||(18138-18185)


Alignment Details
Target: chr2 (Bit Score: 145; Significance: 4e-76; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 13 - 165
Target Start/End: Complemental strand, 45693671 - 45693520
Alignment:
Q  13 catcacaaagatgacacgacactagagatcatcaaagcatctagtctaatctgttgtctccatagattttaacttttaagtaaaacaatggtcgtggaag 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45693671 catcacaaagatgacacgacactagagatcatcaaagcatctagtctaatctgttgtctccatagattttaacttttaagtaaaacaatggtcgtggaag 45693572  T
Q  113 acataaggatcatgagacatccatatttaataagaaaaatgatatttgtacaa 165  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45693571 acataaggatcatgagacat-catatttaataagaaaaatgatatttgtacaa 45693520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 365 - 493
Target Start/End: Complemental strand, 45692694 - 45692566
Alignment:
Q  365 aaatttggaattggccgagttttggaatttctagagaggttcgagtgacacnnnnnnnatggaataacctaagat-caaggtggctaatgtctcggggtt 463  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| ||||||||||||||||||||||||    
T  45692694 aaatttgaaattggccgagttttggaatttctagagaggttcgagtgacactttttt-atggaataacctaagattcaaggtggctaatgtctcggggtt 45692596  T
Q  464 taagatgtttaatagtctagtattcatctc 493  Q
    |||||||||||||||||||| |||| ||||    
T  45692595 taagatgtttaatagtctaggattcttctc 45692566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 258 - 368
Target Start/End: Complemental strand, 45693427 - 45693317
Alignment:
Q  258 actaataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatttaataaacctactcaatacccattg 357  Q
    ||||||||||||| ||| |||  ||| |||||| |||| || |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45693427 actaataaaaagagagagaaaaaaagctgtcattaaaagttgtctcaaatggttgtttaaatatcactactcatttaataaacctactcaatacccattg 45693328  T
Q  358 taacaataaat 368  Q
    |||||||||||    
T  45693327 taacaataaat 45693317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 337
Target Start/End: Original strand, 14714105 - 14714176
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatttaata 337  Q
    |||||| ||| ||| |||||||||| |||||||| |||||||| | |||||||||||||||||||| ||||||    
T  14714105 aaaagagagagaaaagaagttgtca-caaaaattgtctcaaatggatgttcaaatatcactactcaattaata 14714176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 15019100 - 15019030
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||||| | |||||||  ||||||||||||||| ||  ||||||| ||||||||||||||||| |||||    
T  15019100 aataaaaaaagagaaaaaaaaagttgtcatcaaaagttgcctcaaatggttgttcaaatatcactcctcat 15019030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 15283331 - 15283289
Alignment:
Q  136 tatttaataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| |||| ||||||||||||||||||||||||||||||    
T  15283331 tatttaagaagagaaatgatatttgtacaaccactttgtgaca 15283289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 372
Target Start/End: Complemental strand, 45692912 - 45692870
Alignment:
Q  330 atttaataaacctactcaatacccattgtaacaataaatttgg 372  Q
    ||||||||||  |||||||||||||||||||||||||||||||    
T  45692912 atttaataaaaatactcaatacccattgtaacaataaatttgg 45692870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 33296147 - 33296110
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  33296147 aataagagaaatgatatttgtacaaccactttgtgaca 33296110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 3091860 - 3091923
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||||| ||||| || | ||||||| ||||||||||||||||||||    
T  3091860 aaaagagagaaaaaagaagttgtca-caaaagttgtatcaaataattgttcaaatatcactactc 3091923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 11164328 - 11164265
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||||| ||||| || | ||||||||||||||||||||||| ||||    
T  11164328 aaaagagagaaaaaagaagttgtca-caaaagttgtatcaaatagttgttcaaatatcaccactc 11164265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 36133093 - 36133156
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||||| ||||| || | | ||||||||||||||||||||||||||    
T  36133093 aaaagagagaaaaaagaagttgtca-caaaagttgtatgaaatagttgttcaaatatcactactc 36133156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 12600167 - 12600233
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatt 332  Q
    |||||| ||||||| |||||||||| ||||| || | | ||||||||||||||||||||||| |||||    
T  12600167 aaaagagagaaaaaagaagttgtca-caaaagttgtatgaaatagttgttcaaatatcactattcatt 12600233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 330
Target Start/End: Original strand, 22195764 - 22195803
Alignment:
Q  291 caaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||||||||||||||| || ||||||||||||||||||    
T  22195764 caaaaattatctcaaataattattcaaatatcactactca 22195803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 4738645 - 4738611
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  4738645 aagagaaatgatatttgtacaaccactttgtgaca 4738611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 5167815 - 5167781
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  5167815 aagagaaatgatatttgtacaaccactttgtgaca 5167781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 12962530 - 12962568
Alignment:
Q  291 caaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||| |||| ||||||||||||||||||||||||||||    
T  12962530 caaaatttatatcaaatagttgttcaaatatcactactc 12962568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 21490781 - 21490834
Alignment:
Q  270 atagaaaa-aggaagttgtcatcaaaaattatctcaaatagttgttcaaatatca 323  Q
    |||||||| |||||||||| | |||||||||||||||||| ||||||||||||||    
T  21490781 atagaaaagaggaagttgtaa-caaaaattatctcaaataattgttcaaatatca 21490834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 36132972 - 36133006
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  36132972 aagagaaatgatatttgtacaaccactttgtgaca 36133006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 42283312 - 42283278
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  42283312 aagagaaatgatatttgtacaaccactttgtgaca 42283278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 6365189 - 6365218
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  6365189 aaatgatatttgtacaaccactttgtgaca 6365218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 12065916 - 12065945
Alignment:
Q  145 agaaaaatgatatttgtacaaccactttgt 174  Q
    ||||||||||||||||||||||||||||||    
T  12065916 agaaaaatgatatttgtacaaccactttgt 12065945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 30856810 - 30856839
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  30856810 aaatgatatttgtacaaccactttgtgaca 30856839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 34442228 - 34442296
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||||||| ||| ||| || |||||||  ||||||| | |||||||| ||||||||||||||||||||    
T  34442228 aataaaaagagagagaaaagaggttgtcag-aaaaattgtttcaaatagatgttcaaatatcactactca 34442296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 35171302 - 35171265
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  35171302 aataagagaaatgatatttgtacaaccattttgtgaca 35171265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 172
Target Start/End: Original strand, 35965572 - 35965601
Alignment:
Q  143 taagaaaaatgatatttgtacaaccacttt 172  Q
    ||||||||||||||||||||||||||||||    
T  35965572 taagaaaaatgatatttgtacaaccacttt 35965601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 36435684 - 36435713
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  36435684 aaatgatatttgtacaaccactttgtgaca 36435713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 41040269 - 41040298
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  41040269 aaatgatatttgtacaaccactttgtgaca 41040298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 13104598 - 13104661
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| |||||||  ||||||||| |||||||| ||||| || |||||||||||| ||||||||    
T  13104598 aaaagagagaaaaaataagttgtca-caaaaattgtctcatatggttgttcaaataacactactc 13104661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 13711180 - 13711243
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||||| ||||| || |   ||||||||||||||||||||||||||    
T  13711180 aaaagagagaaaaaagaagttgtca-caaaagttgtacaaaatagttgttcaaatatcactactc 13711243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 29795443 - 29795479
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||| |||||||||||||||||||| |||||||||    
T  29795443 ataagagaaatgatatttgtacaaccattttgtgaca 29795479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 32750117 - 32750180
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| |||||||  ||||||||| |||||||| ||||| || |||||||||||| ||||||||    
T  32750117 aaaagagagaaaaaataagttgtca-caaaaattgtctcatatggttgttcaaataacactactc 32750180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 36376803 - 36376744
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcact 325  Q
    |||||| ||||||| |||||||| |  |||||||||||||| ||| |||||||||||||||    
T  36376803 aaaagagagaaaaaagaagttgttaa-aaaaattatctcaattagatgttcaaatatcact 36376744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 3e-18; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 258 - 329
Target Start/End: Original strand, 31997914 - 31997985
Alignment:
Q  258 actaataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||||||| ||| ||| |||||||||||||||| || |||||||| |||||||||||||||||||||    
T  31997914 actaataaaaagagagagaaaagaagttgtcatcaaaagttgtctcaaatggttgttcaaatatcactactc 31997985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 29706022 - 29706087
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||| ||||||| |||||||||| ||||| || | ||||||||||||||||||||||||||||||    
T  29706022 aaaagagagaaaaaagaagttgtca-caaaagttgtatcaaatagttgttcaaatatcactactcat 29706087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 140 - 177
Target Start/End: Original strand, 3483126 - 3483163
Alignment:
Q  140 taataagaaaaatgatatttgtacaaccactttgtgac 177  Q
    |||||||| |||||||||||||||||||||||||||||    
T  3483126 taataagagaaatgatatttgtacaaccactttgtgac 3483163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 32457707 - 32457642
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaa-ttatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| ||||||||||  ||||| || | ||||||||||||||||||||||||||||    
T  32457707 aaaagagagaaaaaagaagttgtcaaaaaaaaattgtatcaaatagttgttcaaatatcactactc 32457642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 108427 - 108463
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||| ||||||||||||||||||||||||||||||    
T  108427 ataagagaaatgatatttgtacaaccactttgtgaca 108463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 20893179 - 20893131
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||||||||| || |||||||| |||||| ||||||||||||||    
T  20893179 aagttgtcatcaaaagttgtctcaaatggttgttaaaatatcactactc 20893131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 146 - 178
Target Start/End: Original strand, 31997813 - 31997845
Alignment:
Q  146 gaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||||||||||||||||||||||||||||||    
T  31997813 gaaaaatgatatttgtacaaccactttgtgaca 31997845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 32687912 - 32687848
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||| ||| ||||| || | |||||||||||||||||||||| |||||    
T  32687912 aaaagagagaaaaaagaagttatcaccaaaagttgtatcaaatagttgttcaaatatcattactc 32687848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 258 - 326
Target Start/End: Original strand, 49130966 - 49131033
Alignment:
Q  258 actaataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcacta 326  Q
    |||||| |||||| ||| ||| |||||||||| |||||||| |||||||| | ||||||||||||||||    
T  49130966 actaatgaaaagagagagaaaagaagttgtca-caaaaattgtctcaaatggatgttcaaatatcacta 49131033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 1901999 - 1901965
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  1901999 aagagaaatgatatttgtacaaccactttgtgaca 1901965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 1911445 - 1911411
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  1911445 aagagaaatgatatttgtacaaccactttgtgaca 1911411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 5398916 - 5398950
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  5398916 aagagaaatgatatttgtacaaccactttgtgaca 5398950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 12792636 - 12792670
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  12792636 aagagaaatgatatttgtacaaccactttgtgaca 12792670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 18169155 - 18169189
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  18169155 aagagaaatgatatttgtacaaccactttgtgaca 18169189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 20215946 - 20215980
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  20215946 aagagaaatgatatttgtacaaccactttgtgaca 20215980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 35272025 - 35272059
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  35272025 aagagaaatgatatttgtacaaccactttgtgaca 35272059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 275 - 329
Target Start/End: Complemental strand, 36318223 - 36318169
Alignment:
Q  275 aaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||| |||||||||| |||||||||| | |||| ||||||||||||||| |||||    
T  36318223 aaaaagaagttgtcaccaaaaattatatgaaatggttgttcaaatatcattactc 36318169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 174
Target Start/End: Original strand, 43176192 - 43176230
Alignment:
Q  136 tatttaataagaaaaatgatatttgtacaaccactttgt 174  Q
    ||||| |||||| ||||||||||||||||||||||||||    
T  43176192 tattttataagagaaatgatatttgtacaaccactttgt 43176230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 335
Target Start/End: Complemental strand, 44365244 - 44365174
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatttaa 335  Q
    |||||| ||| ||| |||||||||| |||||||| | | |||| |||||||||||||||| |||| |||||    
T  44365244 aaaagagagagaaaagaagttgtcaccaaaaattgtataaaatggttgttcaaatatcaccactcttttaa 44365174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 48945845 - 48945879
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  48945845 aagagaaatgatatttgtacaaccactttgtgaca 48945879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 7294044 - 7293988
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| |||||||| ||||||| || ||| |||| |||||||||||||||||||||    
T  7294044 agaaaaaagaagttgt-atcaaaagttgtctaaaatggttgttcaaatatcactactc 7293988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 14957839 - 14957868
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  14957839 aaatgatatttgtacaaccactttgtgaca 14957868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 20380957 - 20380928
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  20380957 aaatgatatttgtacaaccactttgtgaca 20380928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 34607988 - 34607959
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  34607988 aaatgatatttgtacaaccactttgtgaca 34607959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 34733359 - 34733330
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  34733359 aaatgatatttgtacaaccactttgtgaca 34733330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 41877679 - 41877650
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  41877679 aaatgatatttgtacaaccactttgtgaca 41877650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 51464340 - 51464311
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  51464340 aaatgatatttgtacaaccactttgtgaca 51464311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 108564 - 108612
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||| ||||| || | | ||||||||||||||||||||||||||    
T  108564 aagttgtcaccaaaagttgtatgaaatagttgttcaaatatcactactc 108612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 6126573 - 6126637
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||| | ||||| || | | |||| |||||||||||||||||||||    
T  6126573 aaaagagagaaaaaagaagttgtaaccaaaagttgtatgaaatggttgttcaaatatcactactc 6126637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 46473247 - 46473310
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| ||||||||||| |||| || | |||||| ||||||||||||||| |||||    
T  46473247 aaaagagagaaaaaagaagttgtcat-aaaagttgtatcaaatggttgttcaaatatcattactc 46473310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 46953084 - 46953131
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| |||| || | ||||||||||||||||||||||||||||    
T  46953084 aagttgtcat-aaaagttgtatcaaatagttgttcaaatatcactactc 46953131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 47723198 - 47723226
Alignment:
Q  144 aagaaaaatgatatttgtacaaccacttt 172  Q
    |||||||||||||||||||||||||||||    
T  47723198 aagaaaaatgatatttgtacaaccacttt 47723226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 291 - 331
Target Start/End: Original strand, 48649725 - 48649765
Alignment:
Q  291 caaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||||||||||| || |||||||||||| ||||||||||    
T  48649725 caaaaattatctcatatggttgttcaaataacactactcat 48649765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 51406307 - 51406263
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcact 325  Q
    ||||||||| ||||| |||| | ||||||||||||||||||||||    
T  51406307 aagttgtcaccaaaagttatatgaaatagttgttcaaatatcact 51406263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 21857525 - 21857459
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactact 328  Q
    |||||||||| ||||||| ||||||||||| ||||||| ||||| |||||| ||||||||||||||||    
T  21857525 aataaaaagagagaaaaaagaagttgtcat-aaaaattgtctcatatagttattcaaatatcactact 21857459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 272 - 331
Target Start/End: Complemental strand, 32853089 - 32853031
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    ||||||| |||||||||| |||||||| | ||||||||||||||||||||||||||||||    
T  32853089 agaaaaaagaagttgtca-caaaaattgtatcaaatagttgttcaaatatcactactcat 32853031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 10521257 - 10521305
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||    
T  10521257 aagttatcaccaaaaattatataaaatagttgttcaaatatcactactc 10521305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Original strand, 24437578 - 24437618
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatat 321  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  24437578 aagttgtcatcaaaaattatatcaaatggttgttcaaatat 24437618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 31480792 - 31480725
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| ||||||| |||||||||| || ||||| |||||  |||||||||||||| ||||||||    
T  31480792 aataaaaagagagaaaaaagaagttgtca-cataaattgtctcatttagttgttcaaataacactactc 31480725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 30796148 - 30796114
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  30796148 aagagaaatgatatttgtacaaccactttgtgaca 30796114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 1434602 - 1434565
Alignment:
Q  292 aaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| | ||||||||||||||||||||||||||||    
T  1434602 aaaaattgtatcaaatagttgttcaaatatcactactc 1434565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 6435039 - 6435068
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  6435039 aaatgatatttgtacaaccactttgtgaca 6435068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 26378330 - 26378274
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| |||||||| ||||||| || ||| |||| |||||||||||||||||||||    
T  26378330 agaaaaaagaagttgt-atcaaaagttgtctaaaatggttgttcaaatatcactactc 26378274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 31883380 - 31883343
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  31883380 aataagagaaatgatatttgtacaaccactttttgaca 31883343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 32457320 - 32457291
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  32457320 aaatgatatttgtacaaccactttgtgaca 32457291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 332
Target Start/End: Original strand, 33720155 - 33720196
Alignment:
Q  291 caaaaattatctcaaatagttgttcaaatatcactactcatt 332  Q
    |||||||||||| |||| |||||||||||||||||| |||||    
T  33720155 caaaaattatctaaaatggttgttcaaatatcactattcatt 33720196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 1897805 - 1897868
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| || ||||||| ||||| || | |||||||| |||||||||||||||||||    
T  1897805 aaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcactactc 1897868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 13093618 - 13093658
Alignment:
Q  138 tttaataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| |||| ||||||||||||||||||||||||| |||||    
T  13093618 tttattaagtaaaatgatatttgtacaaccactttttgaca 13093658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 31517136 - 31517069
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| ||||||| |||||||||| || || || |||||  |||||||||||||| ||||||||    
T  31517136 aataaaaagagagaaaaaagaagttgtca-cataagttgtctcatttagttgttcaaataacactactc 31517069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 338
Target Start/End: Original strand, 23258151 - 23258222
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatttaataa 338  Q
    |||||| ||||||| |||||||||| |||||||| | |||||| ||||||||||||||||||||| ||||||||    
T  23258151 aaaagagagaaaaaagaagttgtca-caaaaattgtttcaaatggttgttcaaatatcactactc-tttaataa 23258222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 333
Target Start/End: Complemental strand, 9046998 - 9046956
Alignment:
Q  291 caaaaattatctcaaatagttgttcaaatatcactactcattt 333  Q
    |||||||| | ||||||||||||||||||||||||||||||||    
T  9046998 caaaaattgtatcaaatagttgttcaaatatcactactcattt 9046956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 37101638 - 37101573
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||| ||||||| ||||||||||  ||||||| | | |||| ||||||||||||||||||||||    
T  37101638 aaaagagagaaaaaagaagttgtcacgaaaaattgtatgaaatggttgttcaaatatcactactca 37101573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 331
Target Start/End: Original strand, 8841149 - 8841216
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||||||| |||||||||   |||||| |||| ||||| | |||||||||||||||||||| |||||||    
T  8841149 aataaaaagaaagaaaaagg---ttgtcaccaaatattatataaaatagttgttcaaatatcattactcat 8841216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 11879442 - 11879378
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| |||||||||||||||| | |||||||| | | |||| ||| |||||||||||||||||    
T  11879442 aaaagagagaaaaaggaagttgttaccaaaaattgtatgaaatggtttttcaaatatcactactc 11879378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 11896858 - 11896794
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| |||||||||||||||| | |||||||| | | |||| ||| |||||||||||||||||    
T  11896858 aaaagagagaaaaaggaagttgttaccaaaaattgtatgaaatggtttttcaaatatcactactc 11896794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 332
Target Start/End: Original strand, 38779134 - 38779205
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaat-agttgttcaaatatcactactcatt 332  Q
    |||||||| | ||||||| |||||||||| || ||||| ||| |||| |||||||||||||||||||||||||    
T  38779134 aataaaaatagagaaaaaagaagttgtca-cataaattgtctaaaatgagttgttcaaatatcactactcatt 38779205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 39719178 - 39719130
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||| |||||||| |||||||| |||||| ||||||||||||||    
T  39719178 aagttgtcaccaaaaattgtctcaaatggttgttaaaatatcactactc 39719130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 176
Target Start/End: Original strand, 8841025 - 8841060
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtga 176  Q
    ||||||| ||||||||||||||||||||||||||||    
T  8841025 aataagagaaatgatatttgtacaaccactttgtga 8841060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 22852913 - 22852878
Alignment:
Q  143 taagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||| ||||||||||||||||||||||||||||||    
T  22852913 taagagaaatgatatttgtacaaccactttgtgaca 22852878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 260 - 323
Target Start/End: Original strand, 27672979 - 27673041
Alignment:
Q  260 taataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatca 323  Q
    |||||||||||||| ||||  ||||||||| ||||| |||| || |||||||||||||||||||    
T  27672979 taataaaaagatagtaaaataaagttgtca-caaaagttatatctaatagttgttcaaatatca 27673041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 40413322 - 40413252
Alignment:
Q  258 actaataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| |||||| ||||||| |||||| |||| |||| || | |||||| |||||||||||||||||||||    
T  40413322 actaatgaaaagagagaaaaaagaagttatcat-aaaagttgtatcaaatggttgttcaaatatcactactc 40413252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 328
Target Start/End: Complemental strand, 42941643 - 42941577
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactact 328  Q
    |||||||||  ||||||| |||||||||| |||||| ||| ||||||  |||||||||||||||||||    
T  42941643 aataaaaagtgagaaaaaagaagttgtca-caaaaaatatttcaaattattgttcaaatatcactact 42941577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 291 - 329
Target Start/End: Original strand, 295690 - 295728
Alignment:
Q  291 caaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  295690 caaaagttatctcaaatagttgttcaaataacactactc 295728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 3206415 - 3206350
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatc-tcaaatagttgttcaaatatcactactca 330  Q
    |||||| |||||||| | ||||||| ||||||||||| |||||| ||||||||||||||| ||||||    
T  3206415 aaaagagagaaaaagtatgttgtca-caaaaattatcatcaaatggttgttcaaatatcattactca 3206350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 3650251 - 3650297
Alignment:
Q  284 ttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||| ||||| ||||||||||| |||||| |||||||||||||||    
T  3650251 ttgtcaccaaaagttatctcaaatggttgttaaaatatcactactca 3650297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 7596847 - 7596779
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaat-agttgttcaaatatcactactca 330  Q
    ||||||||||||||||||| || |||||| || ||||||||| |||| | |||||||||||||||||||||    
T  7596847 aataaaaagatagaaaaagaaa-ttgtca-cataaattatctaaaatgaattgttcaaatatcactactca 7596779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 28927679 - 28927713
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  28927679 aagagaaatgatatttgtacaaccactttgtgaca 28927713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 142 - 176
Target Start/End: Original strand, 40842010 - 40842044
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgtga 176  Q
    |||||| ||||||||||||||||||||||||||||    
T  40842010 ataagagaaatgatatttgtacaaccactttgtga 40842044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 45101394 - 45101428
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  45101394 aagagaaatgatatttgtacaaccactttgtgaca 45101428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 1796499 - 1796528
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  1796499 aaatgatatttgtacaaccactttgtgaca 1796528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 5502374 - 5502403
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  5502374 aaatgatatttgtacaaccactttgtgaca 5502403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 5502496 - 5502544
Alignment:
Q  280 gaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| |||||||||| ||||||  ||||||||||||||||||||    
T  5502496 gaagttgtca-caaaaattatatcaaatgattgttcaaatatcactactc 5502544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 12732845 - 12732874
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  12732845 aaatgatatttgtacaaccactttgtgaca 12732874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 21418548 - 21418480
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    ||||||||||||||||||  ||||||||| || || || |||||  |||||||||||||| |||||||||    
T  21418548 aataaaaagatagaaaaaataagttgtca-cataagttgtctcatttagttgttcaaataacactactca 21418480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 281 - 330
Target Start/End: Complemental strand, 21648867 - 21648818
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    ||||||||| ||||| || |||||||| |||||| |||||||||||||||    
T  21648867 aagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactca 21648818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 27836183 - 27836212
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  27836183 aaatgatatttgtacaaccactttgtgaca 27836212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 329
Target Start/End: Original strand, 43403937 - 43403966
Alignment:
Q  300 tctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||||||||||||||||||||||||    
T  43403937 tctcaaatagttgttcaaatatcactactc 43403966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 1179511 - 1179558
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||| ||||| |||| ||||||||||||| ||||||||||||||    
T  1179511 aagttgtca-caaaagttatatcaaatagttgtttaaatatcactactc 1179558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 5359453 - 5359520
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| ||||||| ||  |||||| ||||| || | |||||||| |||||||||||||||||||    
T  5359453 aataaaaagagagaaaaaagagattgtca-caaaagttgtttcaaatagatgttcaaatatcactactc 5359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 7678851 - 7678914
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||| | ||||| || | |||||||||||||||||||||| |||||    
T  7678851 aaaagagagaaaaaagaagttgtta-caaaagttgtatcaaatagttgttcaaatatcattactc 7678914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 11789906 - 11789953
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||||||| || ||| ||||||||||| |||||||||||||||    
T  11789906 aagttgtcatcaaagat-atcacaaatagttgtacaaatatcactactc 11789953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 14029179 - 14029131
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||| ||||| || |||||||| |||||| ||||||||||||||    
T  14029179 aagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactc 14029131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 26629185 - 26629149
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||| |||||||||||||||||||||||| |||||    
T  26629185 ataagagaaatgatatttgtacaaccactttttgaca 26629149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 28927800 - 28927863
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||| ||| |||||||||| |||||||| | |||||| |||||||||||||||| ||||    
T  28927800 aaaagagagagaaaagaagttgtca-caaaaattttatcaaatggttgttcaaatatcaccactc 28927863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 32725853 - 32725821
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtga 176  Q
    |||| ||||||||||||||||||||||||||||    
T  32725853 aagagaaatgatatttgtacaaccactttgtga 32725821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 37524380 - 37524317
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| || ||||||| ||||  |||| |||||||| |||||||||||||||||||    
T  37524380 aaaagagagaaaaaagaggttgtca-caaaggttatttcaaatagatgttcaaatatcactactc 37524317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 42543433 - 42543369
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||||| ||||| || | | |||| ||||||||| |||||||||||    
T  42543433 aaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaattatcactactc 42543369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000003; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 10232618 - 10232683
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||| ||||||| |||||||||| ||||| || | | |||||||||||||||||||||||||||    
T  10232618 aaaagagagaaaaaagaagttgtcaccaaaagttgtataaaatagttgttcaaatatcactactca 10232683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 5130330 - 5130266
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| ||||||||||  ||||||| | | ||||||||||||||||||||||||||    
T  5130330 aaaagagagaaaaaagaagttgtcacaaaaaattgtatgaaatagttgttcaaatatcactactc 5130266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 11306815 - 11306878
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| ||||||||| |||||| || | ||||||||||||||||||||||||||||    
T  11306815 aaaagagagaaaaaagaagttgtc-tcaaaagttgtatcaaatagttgttcaaatatcactactc 11306878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 21749477 - 21749541
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| ||| |||||| |||||||||| | |||| |||||||||||||||||||||    
T  21749477 aaaagagagaaaaaagaaattgtcaccaaaaattatataaaatggttgttcaaatatcactactc 21749541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 265 - 324
Target Start/End: Original strand, 34381131 - 34381189
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcac 324  Q
    |||||| ||||||| |||||||||| |||||||||| |||||| ||||||||||||||||    
T  34381131 aaaagagagaaaaacgaagttgtca-caaaaattatatcaaatggttgttcaaatatcac 34381189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 341
Target Start/End: Complemental strand, 1774212 - 1774162
Alignment:
Q  291 caaaaattatctcaaatagttgttcaaatatcactactcatttaataaacc 341  Q
    |||||||| ||| ||||||||||||||||||||||||||||| || |||||    
T  1774212 caaaaattgtctaaaatagttgttcaaatatcactactcattgaacaaacc 1774162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 12661899 - 12661833
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||| ||||||| |||||||||| ||||| || | | ||||||||||||||||||||| ||||||    
T  12661899 aaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatagttgttcaaatatcaccactcat 12661833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 24431570 - 24431505
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||| ||||||| |||||||||| ||| | || |||||||| |||||||||||||||||||||||    
T  24431570 aaaagagagaaaaatgaagttgtca-caatagttgtctcaaatggttgttcaaatatcactactcat 24431505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 2117585 - 2117529
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| |||||||||| ||||| || | ||||||||||||||||||||||||||||    
T  2117585 agaaaaaagaagttgtca-caaaagttgtatcaaatagttgttcaaatatcactactc 2117529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 263 - 328
Target Start/End: Original strand, 20541219 - 20541283
Alignment:
Q  263 taaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactact 328  Q
    ||||||||||||||||| || |||| | |||||||| |  ||||||||||||||||||||||||||    
T  20541219 taaaaagatagaaaaagtaaattgtta-caaaaattgttacaaatagttgttcaaatatcactact 20541283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 178
Target Start/End: Complemental strand, 23991208 - 23991173
Alignment:
Q  143 taagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||| ||||||||||||||||||||||||||||||    
T  23991208 taagagaaatgatatttgtacaaccactttgtgaca 23991173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 43482486 - 43482540
Alignment:
Q  267 aagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatc 322  Q
    |||| ||||||| |||||||||| |||||||| | |||||||||||||||||||||    
T  43482486 aagaaagaaaaaagaagttgtca-caaaaattgtatcaaatagttgttcaaatatc 43482540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 335
Target Start/End: Original strand, 3141630 - 3141684
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatttaa 335  Q
    ||||||||||||||| || | | |||| |||||||||||||||||||||| ||||    
T  3141630 aagttgtcatcaaaagttgtatgaaatggttgttcaaatatcactactcaattaa 3141684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 6515511 - 6515477
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||||||||||||||||||||||| ||||||||    
T  6515511 aagaaaaatgatatttgtacaaccaccttgtgaca 6515477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 28811427 - 28811461
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  28811427 aagagaaatgatatttgtacaaccactttgtgaca 28811461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 33567285 - 33567251
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  33567285 aagacaaatgatatttgtacaaccactttgtgaca 33567251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 281 - 331
Target Start/End: Complemental strand, 40223722 - 40223672
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    ||||||||| |||||||| | | |||| |||||||||||||||||||||||    
T  40223722 aagttgtcaccaaaaattgtatgaaatggttgttcaaatatcactactcat 40223672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 6865844 - 6865815
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  6865844 aaatgatatttgtacaaccactttgtgaca 6865815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 333
Target Start/End: Complemental strand, 9714088 - 9714020
Alignment:
Q  264 aaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcattt 333  Q
    ||||||||||||||  |||||||||| ||| | || | ||| || |||||||||||||||||||||||||    
T  9714088 aaaaagatagaaaatagaagttgtca-caagagttgtatcatatggttgttcaaatatcactactcattt 9714020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 334
Target Start/End: Complemental strand, 12718332 - 12718264
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcattta 334  Q
    |||||| ||| ||| |||||||||| |||||||| |   |||| ||||||||||||||||||||||||||    
T  12718332 aaaagaaagagaaaagaagttgtca-caaaaattgttgaaaatggttgttcaaatatcactactcattta 12718264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 12910787 - 12910816
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  12910787 aaatgatatttgtacaaccactttgtgaca 12910816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 19127127 - 19127156
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  19127127 aaatgatatttgtacaaccactttgtgaca 19127156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 34381015 - 34381044
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  34381015 aaatgatatttgtacaaccactttgtgaca 34381044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 36713246 - 36713217
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  36713246 aaatgatatttgtacaaccactttgtgaca 36713217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 39595275 - 39595304
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  39595275 aaatgatatttgtacaaccactttgtgaca 39595304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 39595393 - 39595457
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||| ||||||| |||||||||| ||||| || | |||||| ||||||||||||||| ||||||    
T  39595393 aaaagagagaaaaaagaagttgtca-caaaagttgtatcaaatggttgttcaaatatcattactca 39595457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 14323924 - 14323857
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||  ||||||| |||||||| | ||||| ||||||||||  |||||| ||||||||||||||    
T  14323924 aataaaaagtgagaaaaaagaagttgt-accaaaagttatctcaaaaggttgtttaaatatcactactc 14323857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 330
Target Start/End: Original strand, 16202832 - 16202904
Alignment:
Q  258 actaataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    ||||||| ||||| ||||||| ||||||||||  |||| || | | ||||  |||||||||||||||||||||    
T  16202832 actaatagaaagagagaaaaaagaagttgtcactaaaagttgtatgaaatgattgttcaaatatcactactca 16202904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 20719967 - 20719904
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||| ||| |||||||||| ||||| || |||||||| | |||||||||||||||||||    
T  20719967 aaaagagagagaaaagaagttgtca-caaaagttgtctcaaatggatgttcaaatatcactactc 20719904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 29227840 - 29227884
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcact 325  Q
    ||||||||| |||||||||| | ||||||||||| ||||||||||    
T  29227840 aagttgtcaccaaaaattatataaaatagttgtttaaatatcact 29227884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 44894426 - 44894363
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||| ||| |||||||||| ||||||||||||||||| | |||||||||||||||||||    
T  44894426 aaaagagagataaaagaagttgtca-caaaaattatctcaaatggatgttcaaatatcactactc 44894363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 330
Target Start/End: Original strand, 10591278 - 10591335
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    ||||||| |||||||||| ||||| || |||||||| ||||||||||||||||||||||    
T  10591278 agaaaaaagaagttgtca-caaaagttgtctcaaatggttgttcaaatatcactactca 10591335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 40717195 - 40717125
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||||||| ||||||| ||||||||||  |||| || | | |||| |||||||||||||||||||||||    
T  40717195 aataaaaagagagaaaaaagaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactcat 40717125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 41966454 - 41966510
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| ||||||||||| ||||||| | | ||||||||||||||||||||||||||    
T  41966454 agaaaaaagaagttgtcat-aaaaattgtttaaaatagttgttcaaatatcactactc 41966510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 329
Target Start/End: Original strand, 45607150 - 45607206
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| |||||||| | ||||| |||||| ||||||||||||||||||||||||||    
T  45607150 agaaaaaagaagttgt-accaaaagttatctaaaatagttgttcaaatatcactactc 45607206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 22330695 - 22330659
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||| ||||||||||||||||||||||||||||||    
T  22330695 ataagagaaatgatatttgtacaaccactttgtgaca 22330659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 174
Target Start/End: Original strand, 30180514 - 30180546
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgt 174  Q
    |||||||||||||||||||||||||||||||||    
T  30180514 ataagaaaaatgatatttgtacaaccactttgt 30180546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 33684799 - 33684862
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||||||| |||||||||| ||||| || | ||| ||||||||||||||| ||||||||    
T  33684799 aaaagatagaaaaaagaagttgtca-caaaagttgtttcatatagttgttcaaataacactactc 33684862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 37351946 - 37351879
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| ||||||| ||| |||||| ||||| |||| ||||||  ||||||||||||||||||||    
T  37351946 aataaaaagagagaaaaaagaaattgtca-caaaagttatatcaaatgattgttcaaatatcactactc 37351879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 43445522 - 43445589
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| ||||||| ||| |||||| |||||||| | ||||||  ||||||||||||||||||||    
T  43445522 aataaaaagaaagaaaaaagaaattgtca-caaaaattgtatcaaatgattgttcaaatatcactactc 43445589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 12142003 - 12142069
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatt 332  Q
    |||||| |||||||  ||||||||| ||||| || | |||||| ||||||||||||||||||||||||    
T  12142003 aaaagaaagaaaaaaaaagttgtca-caaaagttgtatcaaatggttgttcaaatatcactactcatt 12142069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 143 - 178
Target Start/End: Original strand, 41966329 - 41966364
Alignment:
Q  143 taagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||| ||||||||||||||||||||||||||||||    
T  41966329 taagagaaatgatatttgtacaaccactttgtgaca 41966364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 329
Target Start/End: Complemental strand, 48866889 - 48866819
Alignment:
Q  258 actaataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| |||||| ||||||| || ||||||| ||||| || | |||||||| |||||||||||||||||||    
T  48866889 actaatgaaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcactactc 48866819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 2469701 - 2469735
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  2469701 aagagaaatgatatttgtacaaccactttgtgaca 2469735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 323
Target Start/End: Complemental strand, 7390730 - 7390669
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatca 323  Q
    |||||||||| |||||||| ||||||||| |||||||| | | |||| |||||||||||||||    
T  7390730 aataaaaagagagaaaaag-aagttgtcaccaaaaattgtatgaaatggttgttcaaatatca 7390669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 33223602 - 33223568
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||| |||||||||    
T  33223602 aagaaaaatgatatttgtacaaccattttgtgaca 33223568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 37352052 - 37352018
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  37352052 aagagaaatgatatttgtacaaccactttgtgaca 37352018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 155926 - 155870
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| |||||||| ||||||| || ||| |||| |||||||||||||||||||||    
T  155926 agaaaaaagaagttgt-atcaaaagttgtctaaaatggttgttcaaatatcactactc 155870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 4971285 - 4971322
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  4971285 aataagagaaatgatatttgtacaaccattttgtgaca 4971322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 7807188 - 7807237
Alignment:
Q  280 gaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||||||||| || | | |||| |||||||||||||||||||||    
T  7807188 gaagttgtcatcaaaagttgtatgaaatggttgttcaaatatcactactc 7807237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 291 - 328
Target Start/End: Complemental strand, 21839060 - 21839023
Alignment:
Q  291 caaaaattatctcaaatagttgttcaaatatcactact 328  Q
    |||||||| | |||||||||||||||||||||||||||    
T  21839060 caaaaattgtatcaaatagttgttcaaatatcactact 21839023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 27778074 - 27778111
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  27778074 aataagagaaatgatatttgtacaactactttgtgaca 27778111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 28596909 - 28596938
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  28596909 aaatgatatttgtacaaccactttgtgaca 28596938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 31982060 - 31982089
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  31982060 aaatgatatttgtacaaccactttgtgaca 31982089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 178
Target Start/End: Complemental strand, 37856230 - 37856193
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| |||||||||||||||||||| |||||||||    
T  37856230 aataagagaaatgatatttgtacaaccattttgtgaca 37856193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 10591151 - 10591187
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||| || |||||||||||||||||||||||||||    
T  10591151 ataagagaattgatatttgtacaaccactttgtgaca 10591187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 258 - 314
Target Start/End: Complemental strand, 21624463 - 21624408
Alignment:
Q  258 actaataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgtt 314  Q
    ||||||||||| | |||||||||||||| ||| |||||||||||| |||| ||||||    
T  21624463 actaataaaaaaagagaaaaaggaagttatca-caaaaattatcttaaatggttgtt 21624408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 325
Target Start/End: Complemental strand, 22330568 - 22330524
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcact 325  Q
    ||||||||| |||||||||| | |||| |||||||||||||||||    
T  22330568 aagttgtcaccaaaaattatatgaaatggttgttcaaatatcact 22330524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 30180626 - 30180689
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| || ||||||  |||||||| | |||||||| |||||||||||||||||||    
T  30180626 aaaagagagaaaaaagaggttgtcg-caaaaattgtttcaaatagatgttcaaatatcactactc 30180689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 176
Target Start/End: Complemental strand, 38023497 - 38023465
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtga 176  Q
    |||| ||||||||||||||||||||||||||||    
T  38023497 aagagaaatgatatttgtacaaccactttgtga 38023465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 272 - 328
Target Start/End: Original strand, 47193053 - 47193108
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactact 328  Q
    ||||||| |||||||| | ||||| |||||| |||| ||||||||||||||||||||    
T  47193053 agaaaaaagaagttgt-accaaaagttatctaaaatggttgttcaaatatcactact 47193108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 329
Target Start/End: Complemental strand, 30778220 - 30778153
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| ||||||| ||| ||||||| |||| |||| |||||||||||||||||||||| |||||    
T  30778220 aataaaaagagagaaaaaagaaattgtcat-aaaagttatatcaaatagttgttcaaatatcattactc 30778153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 42915171 - 42915108
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||||| ||||| || | ||||||||||||||||||||||||||||    
T  42915171 aaaagagagaaaaaagaagttgtca-caaaagttgtatcaaatagttgttcaaatatcactactc 42915108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 48372178 - 48372114
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| ||||||||||  ||||||| | | ||||||||||||||||||||||||||    
T  48372178 aaaagagagaaaaaagaagttgtcactaaaaattgtatgaaatagttgttcaaatatcactactc 48372114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 28481364 - 28481299
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||| ||| ||| |||||||||| ||| | || ||||||||||||||||||||||||||||||||    
T  28481364 aaaagagagagaaaagaagttgtca-caatagttgtctcaaatagttgttcaaatatcactactcat 28481299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 331
Target Start/End: Complemental strand, 28482239 - 28482174
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||| ||| ||| |||||||||| ||| | || ||||||||||||||||||||||||||||||||    
T  28482239 aaaagagagagaaaagaagttgtca-caatagttgtctcaaatagttgttcaaatatcactactcat 28482174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 281 - 331
Target Start/End: Original strand, 41951670 - 41951720
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    ||||||||| |||||||||| | |||| |||||||||||||||||||||||    
T  41951670 aagttgtcaccaaaaattatatgaaatggttgttcaaatatcactactcat 41951720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 265 - 330
Target Start/End: Complemental strand, 28480490 - 28480426
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||| ||| ||| |||||||||| ||| | || |||||||||||||||||||||||||||||||    
T  28480490 aaaagagagagaaaagaagttgtca-caatagttgtctcaaatagttgttcaaatatcactactca 28480426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 46173545 - 46173582
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  46173545 aataagagaaatgatatttgtacaaccactttgtgaca 46173582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 4896575 - 4896539
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||| ||||||||||||||||||||||||||||||    
T  4896575 ataagagaaatgatatttgtacaaccactttgtgaca 4896539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 31240767 - 31240831
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| |||||||||| ||||| || | | |||| |||||||||||||||||||||    
T  31240767 aaaagagagaaaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactc 31240831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 32713992 - 32714028
Alignment:
Q  293 aaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||||||||| |||||||||||||||||||||    
T  32713992 aaaattatctcaaatcgttgttcaaatatcactactc 32714028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 261 - 327
Target Start/End: Complemental strand, 47134796 - 47134729
Alignment:
Q  261 aataaaaagatagaaaa-aggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactac 327  Q
    |||||||||| |||||| |  |||||||||  ||||||||| | ||||||||||||||||||||||||    
T  47134796 aataaaaagagagaaaagaaaaagttgtcacgaaaaattatatgaaatagttgttcaaatatcactac 47134729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 178
Target Start/End: Original strand, 48326553 - 48326584
Alignment:
Q  147 aaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||||    
T  48326553 aaaaatgatatttgtacaaccactttgtgaca 48326584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 258 - 325
Target Start/End: Original strand, 51389428 - 51389494
Alignment:
Q  258 actaataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcact 325  Q
    |||||| |||||| ||||||| |||||||||| ||||| || | |||||| |||||||||||||||||    
T  51389428 actaatgaaaagagagaaaaaagaagttgtca-caaaagttgtatcaaatggttgttcaaatatcact 51389494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 331
Target Start/End: Complemental strand, 5234427 - 5234358
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||||||| |||||||  || |||||| ||||| || | |||||| |||||||||||||||||||||||    
T  5234427 aataaaaagagagaaaaaaaaaattgtca-caaaagttgtatcaaatggttgttcaaatatcactactcat 5234358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 265 - 331
Target Start/End: Original strand, 41952947 - 41953013
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcat 331  Q
    |||||| |||||||  ||||||||| ||||| |||| | |||| |||||||||||||||||| ||||    
T  41952947 aaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatcactattcat 41953013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 333
Target Start/End: Original strand, 6309397 - 6309426
Alignment:
Q  304 aaatagttgttcaaatatcactactcattt 333  Q
    ||||||||||||||||||||||||||||||    
T  6309397 aaatagttgttcaaatatcactactcattt 6309426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 6370983 - 6371012
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  6370983 aaatgatatttgtacaaccactttgtgaca 6371012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 11064157 - 11064128
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  11064157 aaatgatatttgtacaaccactttgtgaca 11064128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 11997688 - 11997717
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  11997688 aaatgatatttgtacaaccactttgtgaca 11997717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 15596399 - 15596428
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  15596399 aaatgatatttgtacaaccactttgtgaca 15596428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 26440679 - 26440708
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  26440679 aaatgatatttgtacaaccactttgtgaca 26440708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 26885294 - 26885323
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  26885294 aaatgatatttgtacaaccactttgtgaca 26885323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 34116608 - 34116579
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  34116608 aaatgatatttgtacaaccactttgtgaca 34116579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 37547068 - 37547097
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  37547068 aaatgatatttgtacaaccactttgtgaca 37547097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 40409122 - 40409054
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||||||  ||||||| |||||||| | ||||| ||  || |||||||||||||||||||||||||||    
T  40409122 aataaaaagtgagaaaaaagaagttgt-accaaaagttggctaaaatagttgttcaaatatcactactca 40409054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 41119538 - 41119509
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  41119538 aaatgatatttgtacaaccactttgtgaca 41119509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 46566924 - 46566961
Alignment:
Q  141 aataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  46566924 aataagagaaatgatatttgtacatccactttgtgaca 46566961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 143 - 176
Target Start/End: Original strand, 54800995 - 54801028
Alignment:
Q  143 taagaaaaatgatatttgtacaaccactttgtga 176  Q
    ||||| ||||||||||||||||||||||||||||    
T  54800995 taagagaaatgatatttgtacaaccactttgtga 54801028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 333
Target Start/End: Complemental strand, 1580235 - 1580167
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcattt 333  Q
    |||||| |||||||  |||||||||  |||| || | | |||| |||||||||||||||||||||||||    
T  1580235 aaaagagagaaaaaaaaagttgtcacaaaaagttgtatgaaatggttgttcaaatatcactactcattt 1580167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 4896452 - 4896389
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| || ||||||| ||||| || | |||||||| |||||||||||||||||||    
T  4896452 aaaagagagaaaaaagaggttgtca-caaaagttgtttcaaatagatgttcaaatatcactactc 4896389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 172
Target Start/End: Original strand, 19899308 - 19899336
Alignment:
Q  144 aagaaaaatgatatttgtacaaccacttt 172  Q
    |||||||||||||||||||||||||||||    
T  19899308 aagaaaaatgatatttgtacaaccacttt 19899336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 31275265 - 31275328
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||||||| ||| |||||| ||||| || | |||||| |||||||||||||||||||||    
T  31275265 aaaagagagaaaaaagaaattgtca-caaaagttgtatcaaatggttgttcaaatatcactactc 31275328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 36792451 - 36792515
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||| ||| |||||||||| ||||| || | | |||| |||||||||||||||||||||    
T  36792451 aaaagagagagaaaagaagttgtcaccaaaagttgtatgaaatggttgttcaaatatcactactc 36792515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 172
Target Start/End: Complemental strand, 38844563 - 38844535
Alignment:
Q  144 aagaaaaatgatatttgtacaaccacttt 172  Q
    |||||||||||||||||||||||||||||    
T  38844563 aagaaaaatgatatttgtacaaccacttt 38844535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Complemental strand, 39241239 - 39241191
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||| ||||| || |||||||| |||||| ||||||||||||||    
T  39241239 aagttgtcaccaaaagttgtctcaaatggttgttaaaatatcactactc 39241191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 144 - 176
Target Start/End: Original strand, 51318701 - 51318733
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtga 176  Q
    |||| ||||||||||||||||||||||||||||    
T  51318701 aagagaaatgatatttgtacaaccactttgtga 51318733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 55927103 - 55927166
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| ||| ||| ||| |||||| |||||||| |||||||| | |||||||||||||||||||    
T  55927103 aaaagagagagaaaagaaattgtca-caaaaattgtctcaaatggatgttcaaatatcactactc 55927166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 15061960 - 15062028
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| |||||||  ||||||||| ||||| |||| | |||| |||||||||||||||||||||    
T  15061960 aataaaaagagagaaaaaaaaagttgtcaccaaaagttatatgaaatggttgttcaaatatcactactc 15062028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 31480087 - 31480023
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| |||||||  ||||||||| |||||||| | | ||||||||||||||||||||||||||    
T  31480087 aaaagagagaaaaaaaaagttgtcaccaaaaattgtatgaaatagttgttcaaatatcactactc 31480023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 2362489 - 2362551
Alignment:
Q  264 aaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| ||||||  |||||||||| |||||||| | ||||||||||||||||||||||||||||    
T  2362489 aaaaagagagaaaa--gaagttgtca-caaaaattgtatcaaatagttgttcaaatatcactactc 2362551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 45740489 - 45740433
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| ||||||||||| ||||||||| ||||||  ||||||||||||||||||||    
T  45740489 agaaaaaagaagttgtcat-aaaaattatttcaaatgattgttcaaatatcactactc 45740433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 294 - 338
Target Start/End: Complemental strand, 37843359 - 37843315
Alignment:
Q  294 aaattatctcaaatagttgttcaaatatcactactcatttaataa 338  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||    
T  37843359 aaattatatcaaatagttgttcaaatatcactactcttttgataa 37843315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 50226954 - 50226918
Alignment:
Q  142 ataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||| ||||||||||||||||||||||||||||||    
T  50226954 ataagagaaatgatatttgtacaaccactttgtgaca 50226918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 340
Target Start/End: Complemental strand, 28703061 - 28703002
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatttaataaac 340  Q
    |||||||||  |||||||||||||||| |||||| || |||||||||||| || ||||||    
T  28703061 aagttgtcacaaaaaattatctcaaatggttgttaaattatcactactcaattcataaac 28703002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 178
Target Start/End: Original strand, 32966256 - 32966299
Alignment:
Q  135 atatttaataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||| | | ||||||||||||||||||||||||||||||    
T  32966256 atatttaatcacagaaatgatatttgtacaaccactttgtgaca 32966299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 25302716 - 25302682
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  25302716 aagagaaatgatatttgtacaaccactttgtgaca 25302682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Original strand, 49453489 - 49453523
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  49453489 aagagaaatgatatttgtacaaccactttgtgaca 49453523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 5304781 - 5304719
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||| |||||||  ||||||||| |||||||| | | |||| |||||||||||||||||||||    
T  5304781 aaaagagagaaaaa--aagttgtcaccaaaaattgtatgaaatggttgttcaaatatcactactc 5304719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 5309108 - 5309079
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  5309108 aaatgatatttgtacaaccactttgtgaca 5309079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 5477220 - 5477191
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  5477220 aaatgatatttgtacaaccactttgtgaca 5477191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 329
Target Start/End: Complemental strand, 8934479 - 8934423
Alignment:
Q  272 agaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||| |||||||||| | ||||| || ||||| |||||||||||||||||||||    
T  8934479 agaaaaagaaagttgtcat-agaaattgtcacaaatggttgttcaaatatcactactc 8934423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 31428025 - 31427996
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  31428025 aaatgatatttgtacaaccactttgtgaca 31427996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 32821638 - 32821667
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  32821638 aaatgatatttgtacaaccactttgtgaca 32821667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 40610348 - 40610412
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactca 330  Q
    |||||| ||| ||| |||||||||| ||||| || |||||||| | ||||||||||||||||||||    
T  40610348 aaaagagagagaaaagaagttgtca-caaaagttgtctcaaatggatgttcaaatatcactactca 40610412  T

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Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 45740612 - 45740583
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  45740612 aaatgatatttgtacaaccactttgtgaca 45740583  T

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Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 49425741 - 49425770
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  49425741 aaatgatatttgtacaaccactttgtgaca 49425770  T

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Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 51172377 - 51172344
Alignment:
Q  145 agaaaaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||| ||||||    
T  51172377 agaaaaatgatatttgtacaaccacttcgtgaca 51172344  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 26910423 - 26910459
Alignment:
Q  137 atttaataagaaaaatgatatttgtacaaccactttg 173  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  26910423 atttaataagagaaatgatatttgtacaaccattttg 26910459  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 46948098 - 46948161
Alignment:
Q  265 aaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| ||| |||||||||| ||| | || |||||||| | |||||||||||||||||||    
T  46948098 aaaagatagagaaaagaagttgtca-caagagttgtctcaaatggatgttcaaatatcactactc 46948161  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 49453612 - 49453659
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||||| ||||| || | ||||||||||||||||||||||||||||    
T  49453612 aagttgtca-caaaagttgtatcaaatagttgttcaaatatcactactc 49453659  T

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Target: scaffold0148 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 9447 - 9485
Alignment:
Q  140 taataagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||||||| |||||||||||||||||||||||| |||||    
T  9447 taataagagaaatgatatttgtacaaccactttatgaca 9485  T

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Target: scaffold0148; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 261 - 339
Target Start/End: Original strand, 9566 - 9643
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactcatttaataaa 339  Q
    |||||||||| |||||| ||||||| ||| ||||  |  ||||| |||||||||||||||||||||||||  |||||||    
T  9566 aataaaaagagagaaaatggaagttatcaccaaagctg-tctcatatagttgttcaaatatcactactcaaataataaa 9643  T

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Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 219737 - 219703
Alignment:
Q  144 aagaaaaatgatatttgtacaaccactttgtgaca 178  Q
    |||| ||||||||||||||||||||||||||||||    
T  219737 aagagaaatgatatttgtacaaccactttgtgaca 219703  T

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Target: scaffold0131 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Complemental strand, 15602 - 15573
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  15602 aaatgatatttgtacaaccactttgtgaca 15573  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 178
Target Start/End: Original strand, 113628 - 113657
Alignment:
Q  149 aaatgatatttgtacaaccactttgtgaca 178  Q
    ||||||||||||||||||||||||||||||    
T  113628 aaatgatatttgtacaaccactttgtgaca 113657  T

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Target: scaffold0508 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 289 - 329
Target Start/End: Complemental strand, 11465 - 11425
Alignment:
Q  289 atcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    ||||||| || ||| ||||||||||||||||||||||||||    
T  11465 atcaaaagttgtctaaaatagttgttcaaatatcactactc 11425  T

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Target: scaffold0204 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 261 - 329
Target Start/End: Original strand, 27454 - 27522
Alignment:
Q  261 aataaaaagatagaaaaaggaagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||| ||||| ||||||| ||| ||||||  ||||||| | | |||| |||||||||||||||||||||    
T  27454 aatagaaagagagaaaaaagaaattgtcactaaaaattgtatgaaatggttgttcaaatatcactactc 27522  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 281 - 329
Target Start/End: Original strand, 18138 - 18185
Alignment:
Q  281 aagttgtcatcaaaaattatctcaaatagttgttcaaatatcactactc 329  Q
    |||||||||| |||| || | ||||||||||||||||||||||||||||    
T  18138 aagttgtcat-aaaagttgtatcaaatagttgttcaaatatcactactc 18185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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