View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11151_high_4 (Length: 384)

Name: NF11151_high_4
Description: NF11151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11151_high_4
NF11151_high_4
[»] chr6 (37 HSPs)
chr6 (1-366)||(3921604-3921982)
chr6 (204-366)||(13353247-13353408)
chr6 (204-366)||(33796372-33796533)
chr6 (142-354)||(12329995-12330205)
chr6 (204-366)||(6542820-6542981)
chr6 (204-366)||(4868689-4868851)
chr6 (204-330)||(17147772-17147897)
chr6 (214-366)||(33631692-33631843)
chr6 (216-366)||(33494585-33494734)
chr6 (214-367)||(3680057-3680209)
chr6 (233-354)||(7638754-7638874)
chr6 (224-344)||(24554185-24554303)
chr6 (204-331)||(30505583-30505709)
chr6 (204-331)||(31961024-31961150)
chr6 (204-345)||(6400732-6400871)
chr6 (204-366)||(9705066-9705226)
chr6 (216-367)||(32290773-32290923)
chr6 (251-354)||(19712774-19712878)
chr6 (271-366)||(6054215-6054310)
chr6 (271-354)||(11085639-11085722)
chr6 (275-367)||(8001496-8001589)
chr6 (278-366)||(8026435-8026523)
chr6 (192-366)||(30256624-30256796)
chr6 (214-336)||(1788829-1788957)
chr6 (247-334)||(6237625-6237713)
chr6 (251-345)||(5572538-5572633)
chr6 (247-343)||(2736319-2736417)
chr6 (308-354)||(27653275-27653321)
chr6 (216-354)||(13740739-13740876)
chr6 (216-354)||(13746239-13746376)
chr6 (203-308)||(20830617-20830721)
chr6 (315-366)||(30256858-30256909)
chr6 (247-337)||(30849320-30849411)
chr6 (275-324)||(20660961-20661010)
chr6 (271-367)||(3713387-3713483)
chr6 (276-354)||(15082090-15082170)
chr6 (316-368)||(20373614-20373666)
[»] chr2 (43 HSPs)
chr2 (204-366)||(16419313-16419474)
chr2 (204-366)||(2029815-2029976)
chr2 (204-366)||(14466287-14466448)
chr2 (209-354)||(40149118-40149262)
chr2 (204-366)||(5711551-5711713)
chr2 (204-366)||(40379321-40379482)
chr2 (204-366)||(15124660-15124821)
chr2 (204-334)||(16533390-16533519)
chr2 (209-366)||(93237-93392)
chr2 (204-330)||(37812380-37812505)
chr2 (202-339)||(17525209-17525344)
chr2 (204-353)||(33606166-33606314)
chr2 (251-366)||(5509125-5509241)
chr2 (275-366)||(93574-93665)
chr2 (206-330)||(18607123-18607246)
chr2 (191-366)||(13210572-13210746)
chr2 (204-335)||(19110319-19110450)
chr2 (204-366)||(36352038-36352197)
chr2 (278-367)||(24395908-24395997)
chr2 (204-327)||(44404038-44404162)
chr2 (215-354)||(33381076-33381217)
chr2 (203-354)||(13250133-13250283)
chr2 (203-267)||(41069253-41069315)
chr2 (251-366)||(2324286-2324402)
chr2 (271-366)||(17719446-17719541)
chr2 (315-366)||(27036402-27036453)
chr2 (274-324)||(5594114-5594166)
chr2 (247-327)||(34893510-34893591)
chr2 (207-352)||(21383549-21383694)
chr2 (297-351)||(31700941-31700995)
chr2 (211-354)||(32356443-32356583)
chr2 (271-325)||(37828800-37828854)
chr2 (203-294)||(21383401-21383491)
chr2 (247-354)||(10523077-10523184)
chr2 (251-332)||(36316207-36316289)
chr2 (329-367)||(40149004-40149042)
chr2 (203-330)||(2464715-2464841)
chr2 (247-354)||(14927160-14927269)
chr2 (235-366)||(15461020-15461150)
chr2 (313-354)||(28407778-28407819)
chr2 (297-366)||(29718374-29718443)
chr2 (278-326)||(30701208-30701256)
chr2 (271-354)||(38629899-38629983)
[»] scaffold0519 (1 HSPs)
scaffold0519 (204-366)||(1962-2123)
[»] chr8 (50 HSPs)
chr8 (204-366)||(11232306-11232467)
chr8 (204-359)||(41790711-41790865)
chr8 (204-354)||(20301319-20301468)
chr8 (204-354)||(21087951-21088100)
chr8 (204-354)||(8084185-8084334)
chr8 (209-366)||(31197661-31197816)
chr8 (203-367)||(10615439-10615602)
chr8 (204-366)||(39052806-39052967)
chr8 (271-366)||(24532364-24532459)
chr8 (204-366)||(3157436-3157597)
chr8 (209-327)||(18004211-18004328)
chr8 (204-366)||(5932061-5932222)
chr8 (214-327)||(35682903-35683015)
chr8 (204-336)||(7669495-7669625)
chr8 (214-354)||(37868470-37868609)
chr8 (204-351)||(20094672-20094818)
chr8 (215-352)||(5675944-5676080)
chr8 (204-294)||(3157121-3157210)
chr8 (208-337)||(12688147-12688275)
chr8 (203-367)||(8716159-8716323)
chr8 (275-366)||(19256767-19256858)
chr8 (204-316)||(39052649-39052760)
chr8 (247-354)||(37001284-37001395)
chr8 (275-366)||(4828114-4828205)
chr8 (214-294)||(39960075-39960154)
chr8 (297-366)||(11232163-11232232)
chr8 (251-367)||(12317091-12317208)
chr8 (251-366)||(34842724-34842840)
chr8 (271-366)||(15042827-15042924)
chr8 (203-268)||(37868184-37868247)
chr8 (251-366)||(16050075-16050191)
chr8 (203-266)||(37867944-37868005)
chr8 (271-345)||(8466666-8466741)
chr8 (275-366)||(36917386-36917477)
chr8 (278-359)||(26208198-26208280)
chr8 (278-359)||(28213053-28213135)
chr8 (215-294)||(5675857-5675935)
chr8 (310-366)||(17469864-17469920)
chr8 (251-330)||(19472406-19472486)
chr8 (251-330)||(19543331-19543411)
chr8 (251-330)||(19589285-19589365)
chr8 (192-263)||(31079663-31079732)
chr8 (192-247)||(10615040-10615095)
chr8 (251-336)||(17476907-17476993)
chr8 (282-343)||(8860797-8860858)
chr8 (278-367)||(10614889-10614978)
chr8 (297-353)||(38476097-38476154)
chr8 (251-335)||(39743372-39743457)
chr8 (315-359)||(10884117-10884161)
chr8 (251-354)||(31079497-31079601)
[»] chr7 (50 HSPs)
chr7 (204-366)||(25620182-25620343)
chr7 (204-366)||(29469651-29469812)
chr7 (204-367)||(36277103-36277265)
chr7 (204-354)||(21861352-21861501)
chr7 (204-365)||(1596640-1596800)
chr7 (204-366)||(33834237-33834398)
chr7 (204-354)||(36993186-36993334)
chr7 (214-360)||(3519926-3520071)
chr7 (216-344)||(2404297-2404424)
chr7 (204-354)||(33996191-33996337)
chr7 (204-353)||(6001547-6001695)
chr7 (214-354)||(4886387-4886526)
chr7 (204-354)||(48661431-48661581)
chr7 (204-367)||(18826365-18826527)
chr7 (251-366)||(28080710-28080827)
chr7 (250-354)||(44874499-44874604)
chr7 (204-367)||(21821851-21822011)
chr7 (204-353)||(9688982-9689125)
chr7 (204-333)||(31892231-31892359)
chr7 (204-336)||(22574677-22574808)
chr7 (204-291)||(3519837-3519923)
chr7 (275-364)||(10882186-10882275)
chr7 (247-344)||(20305358-20305460)
chr7 (275-359)||(4506985-4507069)
chr7 (299-366)||(3038055-3038122)
chr7 (204-336)||(2315138-2315269)
chr7 (207-366)||(5871691-5871850)
chr7 (276-366)||(34027439-34027529)
chr7 (251-366)||(31257189-31257305)
chr7 (204-354)||(31485536-31485685)
chr7 (204-247)||(48243171-48243214)
chr7 (275-364)||(26239862-26239952)
chr7 (251-366)||(26561995-26562111)
chr7 (204-294)||(40746145-40746233)
chr7 (271-354)||(10903143-10903226)
chr7 (204-258)||(14540853-14540905)
chr7 (308-366)||(17202225-17202283)
chr7 (271-367)||(5871898-5871994)
chr7 (203-294)||(30727230-30727320)
chr7 (313-366)||(40121909-40121962)
chr7 (251-367)||(40746310-40746427)
chr7 (315-366)||(6782907-6782958)
chr7 (204-266)||(40898827-40898887)
chr7 (224-366)||(48417411-48417553)
chr7 (203-308)||(1936224-1936327)
chr7 (140-178)||(3038133-3038171)
chr7 (278-354)||(22339552-22339629)
chr7 (284-336)||(9625493-9625545)
chr7 (299-343)||(11743097-11743141)
chr7 (142-178)||(23839128-23839164)
[»] chr5 (43 HSPs)
chr5 (204-353)||(95378-95526)
chr5 (204-366)||(24346613-24346775)
chr5 (204-366)||(41666869-41667031)
chr5 (204-366)||(9368641-9368802)
chr5 (204-366)||(15480368-15480529)
chr5 (204-366)||(18333577-18333737)
chr5 (204-366)||(24269982-24270143)
chr5 (214-365)||(43117694-43117844)
chr5 (204-367)||(24531644-24531806)
chr5 (204-354)||(6919306-6919455)
chr5 (204-366)||(32908830-32908990)
chr5 (204-353)||(17352546-17352693)
chr5 (204-344)||(25258178-25258317)
chr5 (204-344)||(25321968-25322107)
chr5 (277-366)||(2063683-2063772)
chr5 (204-366)||(24528586-24528747)
chr5 (204-359)||(17150345-17150499)
chr5 (204-326)||(8081226-8081347)
chr5 (204-347)||(20510754-20510895)
chr5 (227-345)||(16704618-16704735)
chr5 (204-367)||(38731715-38731877)
chr5 (247-337)||(6413575-6413666)
chr5 (251-366)||(8098363-8098479)
chr5 (251-366)||(21209843-21209959)
chr5 (271-318)||(13700768-13700815)
chr5 (214-367)||(20225086-20225238)
chr5 (245-337)||(27133143-27133236)
chr5 (204-353)||(26137221-26137370)
chr5 (204-290)||(33337350-33337435)
chr5 (313-366)||(8081098-8081151)
chr5 (204-311)||(15590039-15590145)
chr5 (271-359)||(11896625-11896713)
chr5 (313-354)||(17016382-17016423)
chr5 (313-365)||(1028383-1028435)
chr5 (308-359)||(13296725-13296776)
chr5 (204-266)||(30770161-30770221)
chr5 (284-327)||(30770226-30770269)
chr5 (308-354)||(24487625-24487671)
chr5 (203-294)||(6415790-6415880)
chr5 (247-323)||(11896309-11896386)
chr5 (204-287)||(17015988-17016069)
chr5 (274-366)||(7133956-7134047)
chr5 (204-244)||(18885394-18885434)
[»] chr4 (55 HSPs)
chr4 (204-344)||(6218272-6218411)
chr4 (204-345)||(28245638-28245778)
chr4 (204-366)||(40717318-40717479)
chr4 (204-366)||(35796854-35797015)
chr4 (204-366)||(22231185-22231346)
chr4 (214-354)||(35819015-35819154)
chr4 (214-359)||(35788712-35788857)
chr4 (204-354)||(50543442-50543593)
chr4 (209-344)||(4645710-4645844)
chr4 (201-366)||(52559613-52559779)
chr4 (203-353)||(30530038-30530187)
chr4 (192-354)||(7926386-7926541)
chr4 (204-330)||(27634193-27634318)
chr4 (204-353)||(13555359-13555502)
chr4 (251-366)||(12869185-12869301)
chr4 (204-367)||(36686021-36686180)
chr4 (251-367)||(4464340-4464458)
chr4 (204-294)||(5398587-5398676)
chr4 (206-332)||(35645279-35645404)
chr4 (206-332)||(35645568-35645693)
chr4 (251-365)||(40716542-40716658)
chr4 (251-366)||(53814851-53814967)
chr4 (251-353)||(4905658-4905761)
chr4 (203-351)||(6666511-6666658)
chr4 (204-359)||(11036623-11036777)
chr4 (251-354)||(9685456-9685560)
chr4 (278-366)||(14783137-14783225)
chr4 (204-351)||(21646379-21646524)
chr4 (271-365)||(24513302-24513397)
chr4 (271-366)||(34357973-34358068)
chr4 (278-366)||(1518210-1518298)
chr4 (204-314)||(5398323-5398431)
chr4 (192-330)||(12005570-12005709)
chr4 (298-366)||(22445498-22445566)
chr4 (251-354)||(54054960-54055064)
chr4 (299-366)||(17111609-17111676)
chr4 (202-327)||(21750152-21750276)
chr4 (315-366)||(25052898-25052949)
chr4 (203-343)||(43743058-43743192)
chr4 (271-336)||(32002399-32002463)
chr4 (313-354)||(52827410-52827451)
chr4 (251-367)||(53828445-53828562)
chr4 (271-334)||(49190122-49190185)
chr4 (215-268)||(1215984-1216035)
chr4 (275-333)||(9908778-9908836)
chr4 (192-344)||(25323899-25324049)
chr4 (329-366)||(5398477-5398514)
chr4 (203-321)||(25324145-25324263)
chr4 (142-178)||(400616-400652)
chr4 (204-290)||(6778555-6778640)
chr4 (284-336)||(13611701-13611753)
chr4 (251-330)||(21498643-21498723)
chr4 (271-366)||(30565976-30566072)
chr4 (314-366)||(35609697-35609749)
chr4 (230-288)||(42662587-42662644)
[»] chr3 (36 HSPs)
chr3 (192-366)||(13574785-13574959)
chr3 (204-366)||(35038306-35038466)
chr3 (204-366)||(4155370-4155531)
chr3 (204-366)||(20327726-20327887)
chr3 (204-354)||(16239649-16239799)
chr3 (204-327)||(34992691-34992813)
chr3 (214-331)||(19954339-19954455)
chr3 (219-366)||(20303277-20303423)
chr3 (272-366)||(54567938-54568032)
chr3 (227-366)||(8142547-8142685)
chr3 (247-354)||(45828077-45828185)
chr3 (275-366)||(11589831-11589922)
chr3 (204-305)||(20303176-20303276)
chr3 (280-366)||(16926901-16926987)
chr3 (248-327)||(21809059-21809140)
chr3 (251-366)||(1722998-1723114)
chr3 (247-326)||(24866129-24866208)
chr3 (217-336)||(49629681-49629800)
chr3 (204-354)||(31317286-31317438)
chr3 (227-327)||(46139347-46139446)
chr3 (297-359)||(54368569-54368631)
chr3 (316-367)||(17001409-17001460)
chr3 (271-365)||(35018522-35018616)
chr3 (277-354)||(50052722-50052798)
chr3 (204-323)||(52724098-52724216)
chr3 (277-366)||(12930076-12930166)
chr3 (204-355)||(29215701-29215842)
chr3 (315-359)||(21833401-21833445)
chr3 (271-334)||(22775577-22775641)
chr3 (281-345)||(26753474-26753538)
chr3 (204-286)||(39683380-39683461)
chr3 (243-337)||(28087129-28087224)
chr3 (299-351)||(1800086-1800139)
chr3 (214-247)||(21808834-21808867)
chr3 (203-330)||(25417130-25417256)
chr3 (271-327)||(34659180-34659236)
[»] scaffold0692 (1 HSPs)
scaffold0692 (206-359)||(5633-5785)
[»] chr1 (47 HSPs)
chr1 (204-366)||(4112883-4113044)
chr1 (204-365)||(25145597-25145757)
chr1 (204-366)||(35772075-35772236)
chr1 (204-367)||(38668170-38668332)
chr1 (204-366)||(51460319-51460480)
chr1 (204-326)||(52961433-52961554)
chr1 (214-354)||(2859514-2859653)
chr1 (204-366)||(26176954-26177115)
chr1 (247-366)||(30369881-30370001)
chr1 (202-367)||(27413392-27413556)
chr1 (204-336)||(4112652-4112783)
chr1 (204-336)||(369706-369839)
chr1 (204-354)||(38733209-38733354)
chr1 (214-359)||(4098290-4098434)
chr1 (214-366)||(26173343-26173494)
chr1 (208-366)||(39348233-39348390)
chr1 (202-336)||(17412408-17412541)
chr1 (204-322)||(25713248-25713365)
chr1 (227-366)||(33156779-33156918)
chr1 (204-367)||(16162978-16163139)
chr1 (271-353)||(32783224-32783306)
chr1 (204-353)||(7307780-7307928)
chr1 (142-365)||(35892103-35892324)
chr1 (203-352)||(12376549-12376697)
chr1 (283-366)||(8870865-8870948)
chr1 (204-337)||(31496248-31496380)
chr1 (271-329)||(40524818-40524876)
chr1 (251-367)||(51589851-51589968)
chr1 (204-290)||(34264598-34264683)
chr1 (251-366)||(51589038-51589154)
chr1 (247-344)||(9146781-9146880)
chr1 (281-359)||(51460003-51460081)
chr1 (203-259)||(12325408-12325462)
chr1 (271-335)||(32783155-32783219)
chr1 (297-362)||(17402632-17402697)
chr1 (251-366)||(3169812-3169928)
chr1 (134-178)||(26173499-26173543)
chr1 (204-266)||(8870801-8870861)
chr1 (297-344)||(12489164-12489211)
chr1 (207-312)||(17208654-17208758)
chr1 (315-366)||(29265999-29266050)
chr1 (204-246)||(51459817-51459859)
chr1 (214-247)||(9146676-9146709)
chr1 (317-369)||(2120120-2120172)
chr1 (204-248)||(7653404-7653448)
chr1 (279-366)||(12325510-12325598)
chr1 (278-342)||(26346919-26346983)
[»] scaffold0048 (1 HSPs)
scaffold0048 (204-366)||(81888-82048)
[»] scaffold0092 (1 HSPs)
scaffold0092 (204-366)||(5701-5862)
[»] scaffold0400 (1 HSPs)
scaffold0400 (247-366)||(3891-4011)
[»] scaffold0365 (1 HSPs)
scaffold0365 (247-366)||(4535-4655)
[»] scaffold0129 (1 HSPs)
scaffold0129 (247-366)||(14349-14469)
[»] scaffold0083 (1 HSPs)
scaffold0083 (202-327)||(51358-51482)
[»] scaffold0459 (1 HSPs)
scaffold0459 (204-330)||(13178-13305)
[»] scaffold0366 (2 HSPs)
scaffold0366 (204-330)||(10819-10946)
scaffold0366 (204-330)||(14485-14612)
[»] scaffold0045 (1 HSPs)
scaffold0045 (271-367)||(41149-41245)
[»] scaffold0005 (1 HSPs)
scaffold0005 (278-366)||(56505-56593)
[»] scaffold0047 (1 HSPs)
scaffold0047 (204-367)||(12692-12853)
[»] scaffold0003 (1 HSPs)
scaffold0003 (219-294)||(87701-87775)
[»] scaffold0481 (1 HSPs)
scaffold0481 (251-366)||(3394-3509)
[»] scaffold0542 (1 HSPs)
scaffold0542 (247-313)||(5728-5795)
[»] scaffold0041 (1 HSPs)
scaffold0041 (204-266)||(67397-67457)
[»] scaffold0729 (1 HSPs)
scaffold0729 (204-290)||(2616-2701)


Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 366
Target Start/End: Complemental strand, 3921982 - 3921604
Alignment:
Q  1 gatttcacccctaagtaccttcagcccaaaatcgcatcacccttaaatctccgtcaccaaaccacttccagccacaaactccatcactcccttcacccct 100  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||    
T  3921982 gatttcacccctaagtaccttcagcccaaaatcgtatcacccttaaatctccgtcgccaaaccgcttccagccacaaacaccatcactcccttcacccct 3921883  T
Q  101 aaattgtgtgttcaaattagggcctaactcatccttaca-------------acgtgagaatttcccccacttataaacacattgttagactgtattttt 187  Q
    ||||| |||||||||||||||| ||||||||||||||||             ||||||| |||| ||||||||||||||||||||||||||  |||||||    
T  3921882 aaattttgtgttcaaattagggtctaactcatccttacagaatcagcttatgacgtgaggattttccccacttataaacacattgttagaccatattttt 3921783  T
Q  188 gctaatgtggggctttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgata 287  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| | | |||||||||||| |||||    
T  3921782 tctaatgtggggctttttaacacacaccctcacgaccagcactattgagcttgttttgtgtggacataaatgatgggcggcccatagcggaaacttgata 3921683  T
Q  288 gcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||    
T  3921682 gcaggtgatccaatggatcttgaagaggctctgataccatattagaaatcatggttaaacctaacacgaccctacaaaa 3921604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 13353408 - 13353247
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||||| | | ||||||||||||||||| ||||||  ||||||    
T  13353408 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatg 13353311  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  13353310 gatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 13353247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 33796533 - 33796372
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||||| | | ||||||||||||||||| ||||||  ||||||    
T  33796533 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatg 33796436  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  33796435 gatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 33796372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 142 - 354
Target Start/End: Original strand, 12329995 - 12330205
Alignment:
Q  142 gtgagaatttcccccacttataaacacattgttagactgtatttttgctaatgtggggctttttaacacacaccctcacgaccagcactattgagcttgg 241  Q
    ||||| ||| |||||||||||||||||||||||| |   ||| ||  |  ||||||| || || ||||||| |||||||||||||||  |||| ||||||    
T  12329995 gtgaggattgcccccacttataaacacattgttatatcatatcttatccgatgtgggactctt-aacacaccccctcacgaccagcataattgggcttgg 12330093  T
Q  242 ttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatg 340  Q
    ||||||  |||||||||| |||||| | | || |||||||||||||||||||||  ||||||||||||| ||||||||||||||||| ||||||||| ||    
T  12330094 ttcgtg--gacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatggatcttggagaggctctgataccatattagaaatcgtg 12330191  T
Q  341 gttggacctaacac 354  Q
    ||||| ||||||||    
T  12330192 gttgggcctaacac 12330205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 6542820 - 6542981
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||||||||||||||| |  |||||  |||||||||||  |||||||||| |||||||| | ||| |||||||||||||||| |||| ||||||    
T  6542820 ttaacacacaccctcacgaccaacgatattggacttggttcgtg--gacataaatggtgggtgacccgataacggaaacctgatagcaagtgacccaatg 6542917  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||||| || |||||| |||||||  ||||||| |||| ||||||    
T  6542918 gatcttgaagaggctctgataccatctttgaaatcgtggttgggtctaacacaaccccacaaaa 6542981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 4868689 - 4868851
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||| |||||| | | ||| ||||||||||||||||||||  |||  |    
T  4868689 ttaacacaccccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccagcg 4868786  T
Q  303 gatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||| || |||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  4868787 gatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 4868851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 204 - 330
Target Start/End: Original strand, 17147772 - 17147897
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||  |||||||||| ||||||||   ||||||||||||||||||||||||| ||||||    
T  17147772 ttaacacaccccctcacaaccagcactattgggcttggttcgtg--gacataaatggtgggtgacctgatagcggaaacctgatagcaggtgacccaatg 17147869  T
Q  303 gatcttgaagaggctctgataccatgtt 330  Q
    ||| ||| ||||||||||||||||||||    
T  17147870 gatgttggagaggctctgataccatgtt 17147897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 214 - 366
Target Start/End: Original strand, 33631692 - 33631843
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    |||||||||||||||||||||||||||||| |||  |||||||||| |||||| | | ||||| ||||||||||| ||||||| ||||| ||||||| ||    
T  33631692 ccctcacgaccagcactattgagcttggttagtg--gacataaatggtgggtgtcccgatagcagaaacctgatatcaggtgacccaatagatcttggag 33631789  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    | ||||||||| ||| ||| |||||||||||||||||||| | |||| ||||||    
T  33631790 atgctctgatatcatcttaaaaatcatggttggacctaactcaaccccacaaaa 33631843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 216 - 366
Target Start/End: Complemental strand, 33494734 - 33494585
Alignment:
Q  216 ctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagag 314  Q
    ||||||||||||||||||| ||||||||||||   ||||||| | |||||| | | |||| |||||||||||||||||||| ||||||||||| ||||||    
T  33494734 ctcacgaccagcactattgggcttggttcgtga--acataaacggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatctcgaagag 33494637  T
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    | ||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  33494636 gttctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 33494585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 214 - 367
Target Start/End: Complemental strand, 3680209 - 3680057
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    |||||||||||| |||||||| ||||||||  |||||||||||||| ||| |||| | ||||||||||||| ||||||||||| || |||||| ||| ||    
T  3680209 ccctcacgaccaacactattgggcttggtt--tgtggacataaatggtggatgacccgatagcggaaacctaatagcaggtgacccgatggattttggag 3680112  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||| ||||||||||| ||||||||  ||||||| |||||||| |||| |||||||    
T  3680111 agggtctgataccatcttagaaattgtggttgggcctaacacaaccccacaaaat 3680057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 233 - 354
Target Start/End: Original strand, 7638754 - 7638874
Alignment:
Q  233 tgagcttggttcgtgtggacataaatgatgggtga-cacatagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgtta 331  Q
    ||||||||||||||   |||||||||||||||||| |  ||||||||||||||||||||||||| ||||| ||||||| ||| ||||||||| | | |||    
T  7638754 tgagcttggttcgta--gacataaatgatgggtgatctgatagcggaaacctgatagcaggtgatccaatagatcttggagaagctctgatatcttctta 7638851  T
Q  332 gaaatcatggttggacctaacac 354  Q
    |||||||| ||||||||||||||    
T  7638852 gaaatcatagttggacctaacac 7638874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 224 - 344
Target Start/End: Complemental strand, 24554303 - 24554185
Alignment:
Q  224 cagcactattgagcttggttcgtgtggacataaatgatgggtga-cacatagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgat 322  Q
    ||||| |||||||||||||||||   |||||||||| ||||||  |  ||||||| |||||||||||||||| ||||||||||||||||||  |||||||    
T  24554303 cagcattattgagcttggttcgtt--gacataaatggtgggtggtctgatagcggtaacctgatagcaggtg-gccaatggatcttgaagacactctgat 24554207  T
Q  323 accatgttagaaatcatggttg 344  Q
    |||||||||||||| |||||||    
T  24554206 accatgttagaaattatggttg 24554185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 30505709 - 30505583
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||| | |||||| ||||| |||| ||| |||||||||||   ||||||||  ||||||| ||| |||| |||||||||||||||||||| ||||||    
T  30505709 ttaacaccccccctcatgaccatcactgttgggcttggttcgta--gacataaagaatgggtggcacgataggggaaacctgatagcaggtgacccaatg 30505612  T
Q  303 gatcttgaagaggctctgataccatgtta 331  Q
     |||||| |||||||||||||||||||||    
T  30505611 catcttggagaggctctgataccatgtta 30505583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 204 - 331
Target Start/End: Complemental strand, 31961150 - 31961024
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||  |||||||||| || ||||||| ||||||| ||||  |||||||||| |||| | ||| ||||| ||||||||||||||||||  ||||||    
T  31961150 ttaacacatcccctcacgactagtactattgggcttggtccgtg--gacataaatggtggggggcacgatagcagaaacctgatagcaggtggcccaatg 31961053  T
Q  303 gatcttgaagaggctctgataccatgtta 331  Q
    ||||||| ||||||||||||| |||||||    
T  31961052 gatcttggagaggctctgatatcatgtta 31961024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 345
Target Start/End: Original strand, 6400732 - 6400871
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||| | ||||||||||||||||||||| |||||||||  ||||||||||||| ||||| | |  ||||| ||||||||||||||||||| || ||     
T  6400732 ttaacaccccccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtggtccgatagcagaaacctgatagcaggtga-cccata 6400828  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    ||| ||| ||||||| ||||||||| ||| ||||| |||||||    
T  6400829 gattttggagaggctttgataccatcttaaaaatcgtggttgg 6400871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 9705226 - 9705066
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||||||||||||  |||||||    |||||||||||| |||||| | | |||  |||||||||||||||||||  ||||      
T  9705226 ttaacacaccccctcacgaccagcactattggacttggtt----tggacataaatggtgggtggcccgataatggaaacctgatagcaggtggcccaaca 9705131  T
Q  303 gatcttgaag-aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
     |||||| || ||||||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  9705130 aatcttggaggaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 9705066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 216 - 367
Target Start/End: Complemental strand, 32290923 - 32290773
Alignment:
Q  216 ctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagag 314  Q
    ||||||||||||| ||||| ||||| ||  |||||||||||||| |||||| | | |||||| ||| ||||||| |||||  || |||||| ||| |||     
T  32290923 ctcacgaccagcattattgggcttgatt--tgtggacataaatggtgggtggcccgatagcgaaaatctgatagtaggtggcccgatggatattggagat 32290826  T
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||| ||||||| ||||||||| | ||| | |||||||| ||||||||||||    
T  32290825 gctctaataccatcttagaaatcgttgtttggcctaacacaaccctacaaaat 32290773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 19712878 - 19712774
Alignment:
Q  251 acataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||||| || || ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||||||  ||||||| |||    
T  19712878 acataaatgacgggtgacccaataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatggtggttgggcct 19712779  T
Q  350 aacac 354  Q
    |||||    
T  19712778 aacac 19712774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 6054310 - 6054215
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||||  | |||| |||||||||||| ||||||| ||| ||||||||| ||||||   ||||||||| || ||||||    
T  6054310 atagcggaaacctgatagcaggtggcctaatgaatcttgaagaggttctgatatcatcttagaaatcgtggttgagtctaacacgatcccacaaaa 6054215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 354
Target Start/End: Complemental strand, 11085722 - 11085639
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||||||||||||||  |||| | |||||| ||||||||| | ||||| ||||||||| || |||||||||||||    
T  11085722 atagcggaaacctgatagcaggtggcccaacgtatcttggagaggctctaaaaccatcttagaaatcgtgattggacctaacac 11085639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 275 - 367
Target Start/End: Original strand, 8001496 - 8001589
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||||||||||||||||||  |||| ||||||| ||| || |||||||||||| ||||||||  ||||||| |||||||| |||| |||||||    
T  8001496 cggaaacctgatagcaggtggcccaacggatctttaaggagactctgataccatcttagaaattgtggttgggcctaacacaacccaacaaaat 8001589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 8026523 - 8026435
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||| ||||||  ||||   ||| |||||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  8026523 aaacctgataacaggtggcccaacaaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 8026435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 192 - 366
Target Start/End: Complemental strand, 30256796 - 30256624
Alignment:
Q  192 atgtggggctttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagca 290  Q
    ||||||| || || ||||||| || ||||||||| |||| ||| |||| |||||||  ||||||||||  ||||| | | ||| || |||||||||||||    
T  30256796 atgtgggactcttaaacacaccccatcacgaccaacactgttgggcttagttcgtg--gacataaatgg-gggtggctcgatatcgaaaacctgatagca 30256700  T
Q  291 ggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
     | |  ||||||||| ||| | ||||||||||||||  ||||||||| ||||||| |||||||| |||| ||||||    
T  30256699 tgcggcccaatggattttggaaaggctctgataccaccttagaaatcgtggttgggcctaacacaaccccacaaaa 30256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 336
Target Start/End: Original strand, 1788829 - 1788957
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagc--------caatgga 304  Q
    |||||||| || |||||||||||||||||||   |||||||||||||||||| |||| |||||||||||| ||||||| || |||        ||||| |    
T  1788829 ccctcacggcctgcactattgagcttggttc--ttggacataaatgatgggtaacacgatagcggaaaccagatagcatgt-agcctaatggacaatgaa 1788925  T
Q  305 tcttgaagaggctctgataccatgttagaaat 336  Q
    | ||||||||||||||||||||| ||||||||    
T  1788926 ttttgaagaggctctgataccatcttagaaat 1788957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 247 - 334
Target Start/End: Original strand, 6237625 - 6237713
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaa 334  Q
    ||||||||||||| ||||||   | |||||||||||||| ||||| |||  |||||||||||||||||| |||| ||||||| ||||||    
T  6237625 gtggacataaatggtgggtggtccgatagcggaaacctggtagcaagtggtccaatggatcttgaagagactctaataccatcttagaa 6237713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 251 - 345
Target Start/End: Original strand, 5572538 - 5572633
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    |||||||||| ||||| | | ||| ||||||||||||| |||| |  |||| | ||| |||||||||||||||||||| ||||||||| |||||||    
T  5572538 acataaatgacgggtggcccgataacggaaacctgataacaggcggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgg 5572633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 343
Target Start/End: Original strand, 2736319 - 2736417
Alignment:
Q  247 gtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaatggatcttgaa-gaggctctgataccatgttagaaatcatggtt 343  Q
    ||||||||||||||||||| | |  ||| ||||||||| ||||||||||  ||||| |||||||||  ||||||||||| ||| ||||||||| |||||    
T  2736319 gtggacataaatgatgggtggtccgataacggaaacctaatagcaggtggcccaatagatcttgaatcaggctctgatatcattttagaaatcgtggtt 2736417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 354
Target Start/End: Complemental strand, 27653321 - 27653275
Alignment:
Q  308 tgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  27653321 tgaagaggctctgataccatattagaaatcgtggttgggcctaacac 27653275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 354
Target Start/End: Complemental strand, 13740876 - 13740739
Alignment:
Q  216 ctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagag 314  Q
    ||||||||||| | |||||| |||||||  |||||| ||||||  |||||| | | |||| | |||||||||||  ||||| | ||||||||||| ||||    
T  13740876 ctcacgaccagtaatattgaacttggtt--tgtggatataaattgtgggtggcccgatagggaaaacctgatagatggtgacctaatggatcttgcagag 13740779  T
Q  315 gctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||| |||  || ||||||||| ||||||  ||||||||    
T  13740778 gctctaatataatattagaaatcgtggttgagcctaacac 13740739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 354
Target Start/End: Complemental strand, 13746376 - 13746239
Alignment:
Q  216 ctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagag 314  Q
    ||||||||||| | |||||| |||||||  |||||| ||||||  |||||| | | |||| | |||||||||||  ||||| | ||||||||||| ||||    
T  13746376 ctcacgaccagtaatattgaacttggtt--tgtggatataaattgtgggtggcccgatagggaaaacctgatagatggtgacctaatggatcttgcagag 13746279  T
Q  315 gctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||| |||  || ||||||||| ||||||  ||||||||    
T  13746278 gctctaatataatattagaaatcgtggttgagcctaacac 13746239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 203 - 308
Target Start/End: Complemental strand, 20830721 - 20830617
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtga-cacatagcggaaacctgatagcaggtgagccaat 301  Q
    ||||||| |||| ||||||||||| | ||||| |||||||||  ||||| ||||||||||||||| |  |||||  |||||||||||||| | | | |||    
T  20830721 tttaacatacactctcacgaccagtattattgggcttggttc--gtggaaataaatgatgggtgatccgatagcaaaaacctgatagcagataacctaat 20830624  T
Q  302 ggatctt 308  Q
    |||||||    
T  20830623 ggatctt 20830617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 30256909 - 30256858
Alignment:
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  30256909 gctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 30256858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 337
Target Start/End: Original strand, 30849320 - 30849411
Alignment:
Q  247 gtggacataaatgatgggtgacacat-agcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatc 337  Q
    ||||||||||||| || ||| | ||| ||||||||||| ||||||||||  |||||||||||| ||| | || ||||| ||| |||||||||    
T  30849320 gtggacataaatggtgagtggctcattagcggaaacctaatagcaggtggtccaatggatcttaaagggactttgatatcatcttagaaatc 30849411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 275 - 324
Target Start/End: Complemental strand, 20661010 - 20660961
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgatac 324  Q
    |||| ||||||||| |||||| ||||| ||||||| ||||||||||||||    
T  20661010 cggatacctgatagtaggtgatccaatagatcttggagaggctctgatac 20660961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 367
Target Start/End: Complemental strand, 3713483 - 3713387
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||||||||| ||||| ||||||  ||||||  ||||| |||||||||  || ||| ||||||||  ||||||  |||||||| ||| ||||||||    
T  3713483 atagcggaaacttgataccaggtggtccaatgtgtcttggagaggctctcgtatcatcttagaaattgtggttgtgcctaacacaaccttacaaaat 3713387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 354
Target Start/End: Original strand, 15082090 - 15082170
Alignment:
Q  276 ggaaacctgatagcaggtgagccaat-ggatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||||||||||||||||  ||||  ||||||| || |||| ||||||||||| ||||||||| || |||| ||||||||    
T  15082090 ggaaacctgatagcaggtggtccaaacggatcttagaggaggttctgataccatattagaaatcgtgtttgggcctaacac 15082170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 20373666 - 20373614
Alignment:
Q  316 ctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaatg 368  Q
    |||||||||||| ||| ||||| ||||||| |||||||| |||| ||||||||    
T  20373666 ctctgataccatcttataaatcgtggttgggcctaacacaaccccacaaaatg 20373614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 3e-45; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 16419474 - 16419313
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| |||||| | | ||||||||||||||||||||||||  ||||||    
T  16419474 ttaacacaccccctcacgaccagcactattgagcttggttcgtg--gacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatg 16419377  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| ||||| || |||| ||||||    
T  16419376 gatcttggagaggctctgataccatcttagaaatcgtggttgggcctaatacaaccccacaaaa 16419313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 2029976 - 2029815
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| ||||||   | ||||||||||||| ||||||||||  ||||||    
T  2029976 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggtccgatagcggaaacctaatagcaggtggcccaatg 2029879  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| ||||| || |||| ||||||    
T  2029878 gatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaaacaaccccacaaaa 2029815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 14466287 - 14466448
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||||| | | ||||||||||||||||| || |||  ||||||    
T  14466287 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacctgataacaagtggcccaatg 14466384  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  14466385 gatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 14466448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 209 - 354
Target Start/End: Original strand, 40149118 - 40149262
Alignment:
Q  209 acacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatct 307  Q
    |||||||||||||||||||||||||| ||||||||||||  |||||||||  ||||||   | ||||| |||| |||||||||||||| |||||||||||    
T  40149118 acacaccctcacgaccagcactattgggcttggttcgtg--gacataaatagtgggtggtccgatagctgaaatctgatagcaggtgacccaatggatct 40149215  T
Q  308 tgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||||||||||||||||| ||||||||  ||||||| ||||||||    
T  40149216 tgaagaggctctgataccatcttagaaattgtggttgggcctaacac 40149262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 5711551 - 5711713
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||| |||||| | | ||| ||||||||||||||||||||  |||| |    
T  5711551 ttaacacaccccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtccaacg 5711648  T
Q  303 gatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||| || ||||||||||||| || ||||||||  ||||||| |||||||| |||| ||||||    
T  5711649 gatcttggaggaggctctgatactatcttagaaatggtggttgggcctaacacaaccccacaaaa 5711713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 40379321 - 40379482
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||  |||||||||||||||| ||| ||||||||||||  || ||||||| |||||| | | |||| |||||||||||||||||||  | ||||    
T  40379321 ttaacacacctcctcacgaccagcacttttgggcttggttcgtg--gatataaatggtgggtggcccgatagaggaaacctgatagcaggtggcctaatg 40379418  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| | ||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  40379419 gatcttggaaaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 40379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 15124660 - 15124821
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||  ||||||| |||||||||||||  |||||||||||  |||||||||| ||| |||| | ||| || |||||||||||||||||  ||||||    
T  15124660 ttaacacatcccctcacaaccagcactattggacttggttcgtg--gacataaatggtggatgacccgataacgaaaacctgatagcaggtggtccaatg 15124757  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| |||| |||||||||||| ||||||||| |||||||  ||||||| |||| ||||||    
T  15124758 gatcttggagagactctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaa 15124821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 334
Target Start/End: Complemental strand, 16533519 - 16533390
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| | |||||||||||||||||||  |||||||||||  |||||||||| |||||| | | |||||| ||||||||||||||||   ||||||    
T  16533519 ttaacacaccctctcacgaccagcactattggccttggttcgtg--gacataaatggtgggtggcccgatagcgaaaacctgatagcaggtagcccaatg 16533422  T
Q  303 gatcttgaagaggctctgataccatgttagaa 334  Q
    ||||||||||||||||||||||||| ||||||    
T  16533421 gatcttgaagaggctctgataccattttagaa 16533390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 209 - 366
Target Start/End: Original strand, 93237 - 93392
Alignment:
Q  209 acacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatct 307  Q
    |||||||| ||||||||||||||||| ||||| ||||||  ||||||| || |||||| | | ||| |||||| |||||||||||||  |||||||||||    
T  93237 acacaccc-cacgaccagcactattgggcttgattcgtg--gacataattggtgggtggcccgataacggaaagctgatagcaggtggcccaatggatct 93333  T
Q  308 tgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    || ||||||||||||||||| ||| ||||| ||||||| |||||||| |||| ||||||    
T  93334 tggagaggctctgataccatcttaaaaatcgtggttgggcctaacacaaccccacaaaa 93392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 330
Target Start/End: Original strand, 37812380 - 37812505
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||| ||||| ||||||||||||  ||||||||   |||||| | | ||||| ||||||||||||||||||  ||||||    
T  37812380 ttaacacaccccctcacgaccagcattattgggcttggttcgtg--gacataaacagtgggtggcccgatagcagaaacctgatagcaggtggcccaatg 37812477  T
Q  303 gatcttgaagaggctctgataccatgtt 330  Q
    ||||||| |||||||| |||||||||||    
T  37812478 gatcttggagaggctccgataccatgtt 37812505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 339
Target Start/End: Original strand, 17525209 - 17525344
Alignment:
Q  202 ttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaa 300  Q
    ||||||||||| | |||||||||| |||||||| |||||||||  ||||||||||||| |||||| | | |||||||| |||||||||||||||  ||||    
T  17525209 ttttaacacacccactcacgaccatcactattgggcttggttc--gtggacataaatggtgggtggcccgatagcggatacctgatagcaggtggcccaa 17525306  T
Q  301 tggatcttgaagaggctctgataccatgttagaaatcat 339  Q
    ||||| ||||||||||||| ||| ||| |||||| ||||    
T  17525307 tggat-ttgaagaggctcttatatcatcttagaattcat 17525344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 33606166 - 33606314
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||  ||||||||||| |||||||  ||||||||||||  |||||||||| |||||| |   |||||||||||||||||||| |||| |||||     
T  33606166 ttaacacaccacctcacgaccatcactattaggcttggttcgtg--gacataaatggtgggtggcctgatagcggaaacctgatagcaagtgacccaata 33606263  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    |||||||||||| || ||||| ||| ||||||||| ||||||  |||||||    
T  33606264 gatcttgaagagactttgatatcatcttagaaatcgtggttgtgcctaaca 33606314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 5509241 - 5509125
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||||||||||||||| |||    
T  5509241 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcatggttgggcct 5509142  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  5509141 aacacaaccccacaaaa 5509125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 275 - 366
Target Start/End: Original strand, 93574 - 93665
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||||| |||||| ||||||||||||| | ||| ||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  93574 cggaaacctgatagtaggtgacccaatggatcttggaaaggttctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 93665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 206 - 330
Target Start/End: Original strand, 18607123 - 18607246
Alignment:
Q  206 aacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatgga 304  Q
    ||||||||||| |||||| |||||||||| |||||||||||   |||||||||| |||||  | | ||| |||||||||||||||| |||  ||||||||    
T  18607123 aacacacacccacacgactagcactattgggcttggttcgta--gacataaatggtgggttgcccgataacggaaacctgatagcatgtggcccaatgga 18607220  T
Q  305 tcttgaagaggctctgataccatgtt 330  Q
    ||||| |||||||||||||| |||||    
T  18607221 tcttggagaggctctgatactatgtt 18607246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 366
Target Start/End: Complemental strand, 13210746 - 13210572
Alignment:
Q  191 aatgtggggctttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagc 289  Q
    |||||||| || |||||||||| |||||||| ||| ||||||||||||||||  ||||||   |||||| |||||  | | |||| ||||| ||||||||    
T  13210746 aatgtgggactctttaacacaccccctcacg-ccaacactattgagcttggt--gtgtgggtgtaaatggtgggttgcccgatagaggaaatctgatagc 13210650  T
Q  290 aggtgagccaatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    | |||  ||||||||||||| || || |||||||||||| |||||| |  ||||||| ||||||||||||| ||||||    
T  13210649 atgtggcccaatggatcttggaggagtctctgataccatcttagaatttgtggttgggcctaacacgaccccacaaaa 13210572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 335
Target Start/End: Complemental strand, 19110450 - 19110319
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||||| ||||||| |||||||||||||||||||||  |||| |||||||||||  || | | |||||  |||||| ||||||||||| |||| |    
T  19110450 ttaacacacactctcacgatcagcactattgagcttggttc--gtgggcataaatgatgaatggcccgatagcaaaaacctaatagcaggtgacccaacg 19110353  T
Q  303 gatcttgaag-aggctctgataccatgttagaaa 335  Q
    ||||||| || ||||| ||||||||| |||||||    
T  19110352 gatcttggagtaggctttgataccatcttagaaa 19110319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 36352038 - 36352197
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| || ||||||||| |||||||| |||| |||||||     ||||||| |||||| | | ||| ||||||||||||| ||||||  || |||    
T  36352038 ttaacacaccccatcacgaccaacactattgggcttcgttcgtgg----ataaatggtgggtggcccgataacggaaacctgataacaggtggcccgatg 36352133  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||| |||| ||||||| ||| ||||  |||||| ||||||||| |||| ||||||    
T  36352134 gatcttgaagagactctaataccatcttaaaaattgtggttgaacctaacacaaccccacaaaa 36352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 278 - 367
Target Start/End: Complemental strand, 24395997 - 24395908
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    |||| ||| ||||||||  ||||||||||||||||||||||||||||| | ||||||||| ||||| | |||||||| |||| |||||||    
T  24395997 aaacatgagagcaggtggtccaatggatcttgaagaggctctgataccctcttagaaatcgtggtttggcctaacacaaccccacaaaat 24395908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 204 - 327
Target Start/End: Original strand, 44404038 - 44404162
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atag-cggaaacctgatagcaggtgagccaat 301  Q
    ||||||||| || ||||||||| |||||||| ||||||||| ||  |||||||||  |||||||| | |||| ||||||||||||||||||||  |||||    
T  44404038 ttaacacaccccatcacgaccaacactattgggcttggttcatg--gacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaat 44404135  T
Q  302 ggatcttgaagaggctc-tgataccat 327  Q
    |||||||| |||| ||| |||||||||    
T  44404136 ggatcttggagagactcttgataccat 44404162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 354
Target Start/End: Original strand, 33381076 - 33381217
Alignment:
Q  215 cctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgac---acatagcggaaacctgatagcaggtgagccaatggatcttgaa 311  Q
    ||||||||||||||||| || | ||||||||||  |||||||||||||||||||   | ||||| |||||||| ||||| |||  | |||| ||||||||    
T  33381076 cctcacgaccagcactactgggtttggttcgtg--gacataaatgatgggtgactcgagatagcagaaacctgttagcatgtggcctaatgaatcttgaa 33381173  T
Q  312 -gaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
     ||| |||| ||||||| ||||||||| |||||||  |||||||    
T  33381174 ggagactctaataccatcttagaaatcgtggttgggactaacac 33381217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 13250133 - 13250283
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaat 301  Q
    |||||||||  |||||||||||| |||||||| || || ||||||  |||||||||| |||||| | || |||| ||||||| |||  |||||| |||||    
T  13250133 tttaacacatcccctcacgaccatcactattgggcatgcttcgtg--gacataaatggtgggtgccccaatagcagaaaccttataaaaggtgacccaat 13250230  T
Q  302 ggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||||| | | ||||| ||| ||| ||||||||| |  |||||||||||||    
T  13250231 ggatcttggaaaagctctaatatcatcttagaaatcgtatttggacctaacac 13250283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 203 - 267
Target Start/End: Complemental strand, 41069315 - 41069253
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtga 267  Q
    |||||||||| ||||||||||||| |||||||||||||||||  |||||||||||||||| ||||    
T  41069315 tttaacacactccctcacgaccagtactattgagcttggttc--gtggacataaatgatgagtga 41069253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 2324402 - 2324286
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  ||||   ||| |||||||||||||||||||| ||| ||||| ||||||| |||    
T  2324402 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatattaaaaatcgtggttgggcct 2324303  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  2324302 aacacaaccccacaaaa 2324286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 366
Target Start/End: Complemental strand, 17719541 - 17719446
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||| |||||||||||||||||||  | ||||||||||| |||| || ||||||||| ||||||||  ||||||| || ||||| |||| ||||||    
T  17719541 ataggggaaacctgatagcaggtggccaaatggatcttggagagactttgataccatcttagaaattgtggttgggccgaacacaacccgacaaaa 17719446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 315 - 366
Target Start/End: Original strand, 27036402 - 27036453
Alignment:
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  27036402 gctctgataccatattagaaatcatggttgggcctaacacaaccctacaaaa 27036453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 274 - 324
Target Start/End: Complemental strand, 5594166 - 5594114
Alignment:
Q  274 gcggaaacctgatagcaggtgag--ccaatggatcttgaagaggctctgatac 324  Q
    ||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  5594166 gcggaaacctgatagcaggtgtgacccaatggatcttgaagaggctctgatac 5594114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 247 - 327
Target Start/End: Complemental strand, 34893591 - 34893510
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccat 327  Q
    ||||||||||||| ||||||   | |||||| ||||||||||| |||||  ||||||||||||| |||||||||||||||||    
T  34893591 gtggacataaatggtgggtggtccgatagcgaaaacctgatagtaggtggcccaatggatcttggagaggctctgataccat 34893510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 207 - 352
Target Start/End: Original strand, 21383549 - 21383694
Alignment:
Q  207 acacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatggat 305  Q
    |||||| | |||||| ||| ||||||| |||||||| | ||  || ||||||  |||||||| || |||| ||||| ||||||||||||  ||||  |||    
T  21383549 acacacccactcacgcccaccactattaagcttggtgcctg--gatataaattgtgggtgacccaatagcagaaacttgatagcaggtggcccaacagat 21383646  T
Q  306 cttgaag-aggctctgataccatgttagaaatcatggttggacctaac 352  Q
    |||| || ||||||||||||||| ||||||||| ||||||| ||||||    
T  21383647 cttggaggaggctctgataccatcttagaaatcgtggttgggcctaac 21383694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 351
Target Start/End: Original strand, 31700941 - 31700995
Alignment:
Q  297 ccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaa 351  Q
    ||||||||||||| ||||||||| ||||||| ||||||||| ||||||| |||||    
T  31700941 ccaatggatcttggagaggctctaataccatcttagaaatcgtggttgggcctaa 31700995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 354
Target Start/End: Complemental strand, 32356583 - 32356443
Alignment:
Q  211 acaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttg 309  Q
    |||| ||||| |||| ||||||| || ||||||||||  |||||||||| | |||  | | |||||||||||||||  |||||||  |||||| || |||    
T  32356583 acactctcacaaccaacactattcagtttggttcgtg--gacataaatggtaggtagcccgatagcggaaacctga--gcaggtggcccaatgaatattg 32356488  T
Q  310 aagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||||||||||||||  |||||| || | ||||| ||||||||    
T  32356487 aagaggctctgataccaacttagaattcgtagttgggcctaacac 32356443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 37828800 - 37828854
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgatacc 325  Q
    |||||| ||| || ||||||||||| ||||||||| |||||||||||||||||||    
T  37828800 atagcgaaaatctaatagcaggtgatccaatggatattgaagaggctctgatacc 37828854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 21383401 - 21383491
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtg 294  Q
    |||||||||| |||||||  ||| |||||||| ||||||| ||||  || |||||| ||||||| | || |||||||||||||||||||||||    
T  21383401 tttaacacaccccctcacacccaccactattgtgcttggtgcgtg--gatataaataatgggtggcccaatagcggaaacctgatagcaggtg 21383491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 10523184 - 10523077
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatctt-gaagaggctctgataccatgttagaaatcatggttg 344  Q
    ||||||||||||| |||||| | | ||| ||||||| ||||||||||||| ||||  |||||| || ||||  || ||||||| ||||||||| ||||||    
T  10523184 gtggacataaatggtgggtggctcgataacggaaacttgatagcaggtgacccaacagatcttggaggagg--ctaataccattttagaaatcgtggttg 10523087  T
Q  345 gacctaacac 354  Q
    | ||||||||    
T  10523086 ggcctaacac 10523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 332
Target Start/End: Original strand, 36316207 - 36316289
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttag 332  Q
    ||||||||| |||||| | | ||| ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||    
T  36316207 acataaatggtgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattag 36316289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 367
Target Start/End: Original strand, 40149004 - 40149042
Alignment:
Q  329 ttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  40149004 ttagaaatcatggttggacctaacacaaccccacaaaat 40149042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 2464841 - 2464715
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    |||||||||| | |||| || || ||||||||||||||||||  ||||||||||||| |||  ||  | ||||| ||||| | |||||| ||||  ||||    
T  2464841 tttaacacacgctctcatgatcatcactattgagcttggttc--gtggacataaatggtggacgagtcaatagcagaaacataatagcaagtgactcaat 2464744  T
Q  302 ggatcttgaagaggctctgataccatgtt 330  Q
    | |||||  |||| |||||||||||||||    
T  2464743 gaatcttagagagtctctgataccatgtt 2464715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 14927269 - 14927160
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaa-gaggctctgataccatgttagaaatcatggttg 344  Q
    ||||||| ||||||||||||||   ||| | ||||||||||||||||||  |||| ||||| |||| |||||||||||   || ||||||||| ||||||    
T  14927269 gtggacacaaatgatgggtgactggataacagaaacctgatagcaggtgtcccaacggatcatgaaggaggctctgatgttatcttagaaatcgtggttg 14927170  T
Q  345 gacctaacac 354  Q
      ||||||||    
T  14927169 agcctaacac 14927160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 235 - 366
Target Start/End: Complemental strand, 15461150 - 15461020
Alignment:
Q  235 agcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttaga 333  Q
    |||||||||||||  ||||||||||||| ||||| | |||||| ||| |||||||||| ||| | ||| || |||| ||||| ||||| || || ||| |    
T  15461150 agcttggttcgtg--gacataaatgatgtgtgacccgatagcgaaaatctgatagcagttgatctaattgaccttggagaggttctgaaactatcttaaa 15461053  T
Q  334 aatcatggttggacctaacacgaccctacaaaa 366  Q
    ||| |||||||   ||||||| |||| ||||||    
T  15461052 aattatggttgagtctaacacaaccccacaaaa 15461020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 28407778 - 28407819
Alignment:
Q  313 aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||||| ||||||||| ||||||| ||||||||    
T  28407778 aggctctgataccatcttagaaatcgtggttgggcctaacac 28407819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 29718443 - 29718374
Alignment:
Q  297 ccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||| ||  ||||||||||||||||  ||||||||| ||||| | |||||||| |||| ||||||    
T  29718443 ccaatggattttagagaggctctgataccaacttagaaatcgtggttaggcctaacacaaccccacaaaa 29718374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 326
Target Start/End: Original strand, 30701208 - 30701256
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaagaggctctgatacca 326  Q
    ||||||||||| |||||  |||||||||||||||||| |||| ||||||    
T  30701208 aaacctgatagtaggtggcccaatggatcttgaagagactctaatacca 30701256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 354
Target Start/End: Complemental strand, 38629983 - 38629899
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||| |||| |||||| |||  |||||||| || ||||||||||||||| ||| ||||| || ||| || ||||||    
T  38629983 atagcggaaacctaatagaaggtgacccatcggatcttggaggaggctctgataccatcttaaaaatcgtgattgaacataacac 38629899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 2123 - 1962
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||||||| | ||||||||||||||||| ||||||  ||||||    
T  2123 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatg 2026  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  2025 gatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 1962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 8e-43; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 11232306 - 11232467
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||||||| | ||||||||||||||||| ||||||  ||||||    
T  11232306 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtgactcgatagcggaaacctgataacaggtggcccaatg 11232403  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  11232404 gatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 11232467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 204 - 359
Target Start/End: Complemental strand, 41790865 - 41790711
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||| ||| ||||||||| ||  |||||||||| |||||| | | ||||||||||||||||||||||||  ||||||    
T  41790865 ttaacacaccccctcacgaccagcactcttgggcttggttcatg--gacataaatggtgggtggctcgatagcggaaacctgatagcaggtggcccaatg 41790768  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||    
T  41790767 gatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccc 41790711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 20301468 - 20301319
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| |||||||||||   |||||||||| ||||||   | ||||||||||||||||||||||||  ||||||    
T  20301468 ttaacacaccccctcacgaccagcactattgggcttggttcgta--gacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatg 20301371  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  20301370 gatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacac 20301319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 21088100 - 21087951
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| |||||||||||   |||||||||| ||||||   | ||||||||||||||||||||||||  ||||||    
T  21088100 ttaacacaccccctcacgaccagcactattgggcttggttcgta--gacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatg 21088003  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  21088002 gatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacac 21087951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 8084334 - 8084185
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||||||  || ||||| ||||||||||||| |||  ||||||    
T  8084334 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtgatccaatagcgaaaacctgatagcatgtggcccaatg 8084237  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||  |||||||    
T  8084236 gatcttggagaggctctgataccatcttagaaatcgtggttgggtctaacac 8084185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 209 - 366
Target Start/End: Complemental strand, 31197816 - 31197661
Alignment:
Q  209 acacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatct 307  Q
    |||| ||||||| | ||||||||||||||||||||||||  |||||||||| ||||||   | ||||||||||||||||||||||||  |||||||||||    
T  31197816 acaccccctcacaatcagcactattgagcttggttcgtg--gacataaatggtgggtggtccgatagcggaaacctgatagcaggtggcccaatggatct 31197719  T
Q  308 tgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
     | ||||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||    
T  31197718 cggagaggctctgataccatcttagaaatc-tggttgggcctaacacaaccctacaaaa 31197661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 203 - 367
Target Start/End: Complemental strand, 10615602 - 10615439
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    ||||||||||||||||||||| ||||||||||  |||||||||||  || ||||||  | |||||| | ||||||||||||||||| ||||||   ||||    
T  10615602 tttaacacacaccctcacgactagcactattggacttggttcgtg--gagataaatagttggtgacccgatagcggaaacctgatatcaggtggtacaat 10615505  T
Q  302 ggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    |||||||| ||||||||||||||||| |||||||| |||||| |||||||||| |||| |||||||    
T  10615504 ggatcttggagaggctctgataccatcttagaaattatggtttgacctaacacaaccccacaaaat 10615439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 39052806 - 39052967
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||| |||||||| ||||||||||||  |||||||||| |||||| |   |||||||||||||||||||||| |  | ||||    
T  39052806 ttaacacaccccctcacgaccaacactattgggcttggttcgtg--gacataaatggtgggtggccggatagcggaaacctgatagcagggggccaaatg 39052903  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||| ||||||| ||||||||| | ||||| |||||||| |||| ||||||    
T  39052904 gatcttggagaggctctaataccatcttagaaatcgttgttgggcctaacacaaccccacaaaa 39052967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 24532364 - 24532459
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  24532364 atagcggaaacctgatagcaggtggcccaatggatcttgaaggggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaa 24532459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 3157436 - 3157597
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| | ||||||||||||||||||| ||||||||||||  |||||||||| |||||| | | |||||| |||||||||||||||||  ||||||    
T  3157436 ttaacacacccactcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtgtcccgatagcgaaaacctgatagcaggtggtccaatg 3157533  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||| ||| ||||||||||||| ||| ||| ||||  ||||||  |||||||| |||| ||||||    
T  3157534 gattttggagaggctctgatatcatcttataaatggtggttgagcctaacacaaccccacaaaa 3157597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 209 - 327
Target Start/End: Original strand, 18004211 - 18004328
Alignment:
Q  209 acacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatct 307  Q
    |||| ||||||||||||||||||||  ||||||||||||  |||||||||| |||||| | | ||||||||||||||||||||||||  |||||||||||    
T  18004211 acaccccctcacgaccagcactattaggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatggatct 18004308  T
Q  308 tgaagaggctctgataccat 327  Q
    || |||||||||||||||||    
T  18004309 tggagaggctctgataccat 18004328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 5932061 - 5932222
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |  |||||||||||||||||| ||||||||  ||| |||||||||| |||||| | | ||| ||||||| |||||| |||||  ||||||    
T  5932061 ttaacacaccctttcacgaccagcactattgcgcttggtt--tgtcgacataaatggtgggtggcccgataacggaaacgtgatagtaggtggtccaatg 5932158  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||| ||||  ||||||| |||||||| |||| ||||||    
T  5932159 gatcttggagaggctctgataccatcttaaaaatggtggttgggcctaacacaaccccacaaaa 5932222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 327
Target Start/End: Original strand, 35682903 - 35683015
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    |||||||||||||||||||||||||||||||  ||||||||||||| |||||| | | ||||||||||||| ||||||||||  ||||||||||||| ||    
T  35682903 ccctcacgaccagcactattgagcttggttc--gtggacataaatggtgggtggcccgatagcggaaacctaatagcaggtggcccaatggatcttggag 35683000  T
Q  313 aggctctgataccat 327  Q
    | ||| |||||||||    
T  35683001 atgctatgataccat 35683015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 204 - 336
Target Start/End: Complemental strand, 7669625 - 7669495
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||| ||||||   | |||| |||||||||||||||||||   |||||    
T  7669625 ttaacacacaccctcacgaccagcactat-gagcttggttcgtg--gacataaatggtgggtggtccgatagtggaaacctgatagcaggtggctcaatg 7669529  T
Q  303 gatcttgaagaggctctgataccatgttagaaat 336  Q
    |||||||||||| || ||||||||| ||| ||||    
T  7669528 gatcttgaagagactttgataccatcttaaaaat 7669495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 354
Target Start/End: Original strand, 37868470 - 37868609
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    ||||||||||||||| ||||| |||||||||||||  ||||||||| |||||| | || |||||||||| ||||||| ||||  ||||||||||||| ||    
T  37868470 ccctcacgaccagcaatattgggcttggttcgtgt--acataaatggtgggtggcccaatagcggaaacttgatagcgggtggcccaatggatcttggag 37868567  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||| ||||||||| ||| ||||| ||||| | ||||||||    
T  37868568 aggctatgataccatcttaaaaatcgtggttaggcctaacac 37868609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 351
Target Start/End: Original strand, 20094672 - 20094818
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||  |||||||||| |||||| |   |||||| ||||||||||| |||||  ||||||    
T  20094672 ttaacacgccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcctgatagcgaaaacctgataggaggtggcccaatg 20094769  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaa 351  Q
    |||||||||||  |||||||||||  ||| ||||| ||||||| |||||    
T  20094770 gatcttgaagaaactctgataccaacttataaatcgtggttgggcctaa 20094818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 352
Target Start/End: Original strand, 5675944 - 5676080
Alignment:
Q  215 cctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatggatcttgaaga 313  Q
    |||||||||||||| ||||| |||||||||||   |||||||||| |||||||| || || || |||||||||||||||||  | | || ||||||||||    
T  5675944 cctcacgaccagcagtattgggcttggttcgta--gacataaatggtgggtgacccaatatcgaaaacctgatagcaggtggcctagtgaatcttgaaga 5676041  T
Q  314 ggctctgataccatgttagaaatcatggttggacctaac 352  Q
    | |||||||| ||| ||||||||| ||||||||||||||    
T  5676042 gactctgatatcatcttagaaatcgtggttggacctaac 5676080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 3157121 - 3157210
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtg 294  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||| |||||| | | ||||||||||||||||||||||||    
T  3157121 ttaacacaccccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtgtcccgatagcggaaacctgatagcaggtg 3157210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 337
Target Start/End: Complemental strand, 12688275 - 12688147
Alignment:
Q  208 cacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatggatc 306  Q
    ||||| |||||| ||||| |||||||| |||| |||||||  |||||||||| |||||| | || |||  ||||||||||||||||||  ||||||||||    
T  12688275 cacaccccctcatgaccatcactattgggcttagttcgtg--gacataaatggtgggtggcccaatagaagaaacctgatagcaggtggcccaatggatc 12688178  T
Q  307 ttgaagaggctctgataccatgttagaaatc 337  Q
    ||||||||||||| ||| ||| |||||||||    
T  12688177 ttgaagaggctctaatatcatcttagaaatc 12688147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 367
Target Start/End: Complemental strand, 8716323 - 8716159
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    |||||||||| || ||| |||||||| ||||  | || |||||||  |||||||||| | |||||| | ||||||||||||| |||||| ||||  ||||    
T  8716323 tttaacacaccccgtcatgaccagcagtattaggttttgttcgtg--gacataaatggtcggtgacccgatagcggaaacctaatagcatgtgactcaat 8716226  T
Q  302 ggatcttgaaga-ggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||||| | || |||||||||||||| ||||||||| |||||||  ||||||| |||| |||||||    
T  8716225 ggatcttaacgaaggctctgataccatattagaaatcttggttgggtctaacacaaccccacaaaat 8716159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 366
Target Start/End: Original strand, 19256767 - 19256858
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  19256767 cggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 19256858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 316
Target Start/End: Original strand, 39052649 - 39052760
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||| |||||||| |||||||||  ||||||||||||| ||||| | |  ||||||||||||||||||||||||  | |||     
T  39052649 ttaacacaccccctcacgaccaacactattgggcttggttc--gtggacataaatggtgggtggccggatagcggaaacctgatagcaggtggccaaatt 39052746  T
Q  303 gatcttgaagaggc 316  Q
    ||||||| ||||||    
T  39052747 gatcttggagaggc 39052760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 37001395 - 37001284
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttga---agaggctctgataccatgttagaaatcatggt 342  Q
    ||||| || ||||||||||| | | ||||||||||||||| ||||||||  ||||||||||||||   ||||||||||||||||| || |||||| ||||    
T  37001395 gtggaaatgaatgatgggtggcccgatagcggaaacctgacagcaggtggcccaatggatcttgatgaagaggctctgataccatctttgaaatcgtggt 37001296  T
Q  343 tggacctaacac 354  Q
    ||| ||||||||    
T  37001295 tgggcctaacac 37001284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 275 - 366
Target Start/End: Complemental strand, 4828205 - 4828114
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||| ||| ||||||| |||||||| |||| ||||||    
T  4828205 cggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagagatcgtggttgggcctaacacaaccccacaaaa 4828114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 294
Target Start/End: Complemental strand, 39960154 - 39960075
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtg 294  Q
    ||||||||||||||||||||| |||||||||  ||||||||||||| |||||  | | ||||||||||||||||||||||||    
T  39960154 ccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtagctcgatagcggaaacctgatagcaggtg 39960075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 11232163 - 11232232
Alignment:
Q  297 ccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||| ||||||||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  11232163 ccaatggatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 11232232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 12317208 - 12317091
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    ||||||||||||||||   | ||| ||||||||||||| ||||||  |||| | ||| ||||||| |||||||||||| ||||||||| ||||||| |||    
T  12317208 acataaatgatgggtggtccgataacggaaacctgataacaggtggcccaaagaatcgtgaagagtctctgataccatcttagaaatcgtggttgggcct 12317109  T
Q  350 aacacgaccctacaaaat 367  Q
    ||||| | || |||||||    
T  12317108 aacacaatcccacaaaat 12317091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 34842840 - 34842724
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||| ||||||||||| | | ||| |||||||||| || |||| || |||| | ||| |||||||||||||||||||| ||||||||| ||||||  |||    
T  34842840 acattaatgatgggtggcccgataacggaaacctggtaacaggcgacccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgagcct 34842741  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  34842740 aacacaaccccacaaaa 34842724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 15042827 - 15042924
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttg--aagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||||  |||||| ||||||   ||||||| ||||| ||| ||||||||| ||||| | |||||||| |||| ||||||    
T  15042827 atagcggaaacctgatagcaggtggcccaatgaatcttggagagaggctatgataacatcttagaaatcgtggttaggcctaacacaaccccacaaaa 15042924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 37868184 - 37868247
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgac 268  Q
    ||||||||||||||||||||||| |||||||| |||||| ||  ||||||||||||| ||||||||    
T  37868184 tttaacacacaccctcacgaccaacactattgggcttggctc--gtggacataaatggtgggtgac 37868247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 16050191 - 16050075
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| |||||| |||||| ||||||  |||| | ||| |||||||||||||||||||| |||||| || |||||||  ||    
T  16050191 acataaatgacgggtggcccgataacggaaatctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaagtcgtggttgggtct 16050092  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  16050091 aacacaaccccacaaaa 16050075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 203 - 266
Target Start/End: Original strand, 37867944 - 37868005
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtg 266  Q
    ||||||||||||||||||||||| ||||||||  ||||||||  ||||||||||||| ||||||    
T  37867944 tttaacacacaccctcacgaccaacactattggccttggttc--gtggacataaatggtgggtg 37868005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 345
Target Start/End: Original strand, 8466666 - 8466741
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaa-gaggctctgataccatgttagaaatcatggttgg 345  Q
    ||||||||||||||||||||||||  |||||||||||||||  | ||| ||||||||| ||||||||  |||||||    
T  8466666 atagcggaaacctgatagcaggtggcccaatggatcttgaaccaagctttgataccatcttagaaattgtggttgg 8466741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 275 - 366
Target Start/End: Original strand, 36917386 - 36917477
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||| ||||  |||||  |||||||||||| ||||||||||||||||| ||||||||  ||||||  | |||||| |||| ||||||    
T  36917386 cggaaacctaatagtgggtgattcaatggatcttggagaggctctgataccatcttagaaatggtggttgtgcttaacacaaccccacaaaa 36917477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 359
Target Start/End: Original strand, 26208198 - 26208280
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaaga-ggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    |||||||||||||||||  |||| |||||||  ||| |||||||||||||| ||||||||  ||| |||||||||||| ||||    
T  26208198 aaacctgatagcaggtggcccaacggatcttagagaaggctctgataccatcttagaaattgtggatggacctaacacaaccc 26208280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 278 - 359
Target Start/End: Original strand, 28213053 - 28213135
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    |||||||||||||||||  ||||  ||||||| || ||| ||||||||||| ||||||||| ||||||| |||||||| ||||    
T  28213053 aaacctgatagcaggtggcccaacagatcttggaggaggatctgataccatattagaaatcgtggttgggcctaacacaaccc 28213135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 215 - 294
Target Start/End: Original strand, 5675857 - 5675935
Alignment:
Q  215 cctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtg 294  Q
    |||| |||||||||||||||  ||||||||  ||||||||||||| |||||||| | |||||| |||| ||||||||||||    
T  5675857 cctctcgaccagcactattggacttggttc--gtggacataaatggtgggtgacccgatagcgaaaacttgatagcaggtg 5675935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 17469920 - 17469864
Alignment:
Q  310 aagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||||||||| ||||||||| ||||||  |||||||| |||| ||||||    
T  17469920 aagaggctctgataccatattagaaatcgtggttgagcctaacacaaccccacaaaa 17469864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 19472406 - 19472486
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgtt 330  Q
    |||||||||| ||||| | | ||||||||||||||||| ||||||  |||| | ||  |||||||||||||||||||||||    
T  19472406 acataaatgacgggtggcccgatagcggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatgtt 19472486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 330
Target Start/End: Original strand, 19543331 - 19543411
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgtt 330  Q
    |||||||||| ||||| | | ||||||||||||||||| ||||||  |||| | ||  |||||||||||||||||||||||    
T  19543331 acataaatgacgggtggcccgatagcggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatgtt 19543411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 19589365 - 19589285
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgtt 330  Q
    |||||||||| ||||| | | ||||||||||||||||| ||||||  |||| | ||  |||||||||||||||||||||||    
T  19589365 acataaatgacgggtggcccgatagcggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatgtt 19589285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 192 - 263
Target Start/End: Original strand, 31079663 - 31079732
Alignment:
Q  192 atgtggggctttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgg 263  Q
    ||||||| || ||||||||||  ||||||||||| | |||||| |||||||||  |||||||||||||||||    
T  31079663 atgtgggactctttaacacacctcctcacgaccatccctattgggcttggttc--gtggacataaatgatgg 31079732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 10615040 - 10615095
Alignment:
Q  192 atgtggggctttttaacacacaccctcacgaccagcactattgagcttggttcgtg 247  Q
    ||||||| || |||||||||||||||||| |||| ||||||||  |||||||||||    
T  10615040 atgtgggactctttaacacacaccctcacaaccaacactattggacttggttcgtg 10615095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 336
Target Start/End: Complemental strand, 17476993 - 17476907
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaat 336  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  ||||   ||| |||||||||||||||||||| ||||||||    
T  17476993 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatattagaaat 17476907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 343
Target Start/End: Original strand, 8860797 - 8860858
Alignment:
Q  282 ctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggtt 343  Q
    ||||||| |||||| | |||||||||||||||| ||||||||  || ||||||||| |||||    
T  8860797 ctgataggaggtgatctaatggatcttgaagagactctgatattatcttagaaatcgtggtt 8860858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 367
Target Start/End: Original strand, 10614889 - 10614978
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    |||| |||| |||||||  ||||||||||||| ||||||| ||||| ||| ||| ||||| ||||||  ||||| || |||| |||||||    
T  10614889 aaacttgattgcaggtggtccaatggatcttggagaggctatgatatcatcttataaatcgtggttgagcctaatacaaccccacaaaat 10614978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 297 - 353
Target Start/End: Complemental strand, 38476154 - 38476097
Alignment:
Q  297 ccaatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    ||||||||||||| || ||||||||||||||| ||||||||  ||||||| |||||||    
T  38476154 ccaatggatcttggaggaggctctgataccatcttagaaattgtggttgggcctaaca 38476097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 335
Target Start/End: Complemental strand, 39743457 - 39743372
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaa 335  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  ||||   ||| |||||||||||||||||||| |||||||    
T  39743457 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatattagaaa 39743372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 10884161 - 10884117
Alignment:
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||||||||||| ||||||||| ||||||| |||||||| ||||    
T  10884161 gctctgataccatcttagaaatcgtggttgggcctaacacaaccc 10884117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 31079497 - 31079601
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    ||||||||| |||||| | | |||| ||||| |||||| || |||  ||||||||||||| ||||| | ||||||||| ||||||||| |  |||| |||    
T  31079497 acataaatggtgggtggcccgatagtggaaatctgataacatgtggtccaatggatcttgtagaggttttgataccatcttagaaatctttattgggcct 31079596  T
Q  350 aacac 354  Q
    |||||    
T  31079597 aacac 31079601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 8e-43; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 25620343 - 25620182
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||||| ||||||||| |||||||| ||||||||||||  |||||||||| |||||| | || |||||||||||||||||||||||  ||||||    
T  25620343 ttaacacacaccttcacgaccaacactattgggcttggttcgtg--gacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatg 25620246  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  25620245 gatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 25620182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 29469812 - 29469651
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||  |||||||||| |||||| | | ||||||||| ||||||| ||||||  ||||||    
T  29469812 ttaacacaccccctcacgaccagcactattgggcttgattcgtg--gacataaatggtgggtggcccgatagcggaagcctgataacaggtggcccaatg 29469715  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  29469714 gatcttggagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 29469651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 367
Target Start/End: Original strand, 36277103 - 36277265
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| ||||||   | |||||||||||||||||| |||||  ||||||    
T  36277103 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcccaatg 36277200  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||||| ||||||||||||| ||| ||||||||| |||||||  ||||||| |||| |||||||    
T  36277201 gatcttggagaggctctgataacatcttagaaatcgtggttgggactaacacaaccccacaaaat 36277265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 21861501 - 21861352
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||  ||||||||||||  |||||||||| |||||| | | ||||||||||||||||| ||||||  ||||||    
T  21861501 ttaacacaccccctcacgaccagcactattaggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacctgataacaggtggcccaatg 21861404  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||| ||||||||    
T  21861403 gatcttggagaggctctgataccatcttagaaatggtggttgggcctaacac 21861352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 204 - 365
Target Start/End: Complemental strand, 1596800 - 1596640
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||  |||||||||| |||||| | | ||||||||||||||||| || |||  ||||||    
T  1596800 ttaacacacactctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacctgataacatgtggcccaatg 1596703  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaa 365  Q
    ||||||| ||||||||||||||||| ||||||||  ||||| | |||||||| |||| |||||    
T  1596702 gatcttggagaggctctgataccatcttagaaattgtggttaggcctaacacaaccccacaaa 1596640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 33834398 - 33834237
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||| ||| || ||||||||| |||||||| ||||||||||||  |||||||||| |||||| | | |||| | |||||||||||||||||  ||||||    
T  33834398 ttaacccaccccttcacgaccaacactattgggcttggttcgtg--gacataaatggtgggtggcccgatagggaaaacctgatagcaggtggcccaatg 33834301  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  33834300 gatcttggagaggctctgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 33834237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 354
Target Start/End: Original strand, 36993186 - 36993334
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||||| ||||||||||||||||||| |||| ||||||   ||||||||  ||||||   || ||||||||| ||||||||| |||  ||||||    
T  36993186 ttaacacacacc-tcacgaccagcactattgaacttgattcgtga--acataaatagtgggtggtccaatagcggaaatctgatagcacgtggcccaatg 36993282  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||    
T  36993283 gatcttgaagaggctctgataccatcttagaaatcatggttggatctaacac 36993334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 360
Target Start/End: Original strand, 3519926 - 3520071
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||| |||||| | | |||||| ||||| |||||||||||  |||||||||| || ||    
T  3519926 ccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtgtcccgatagcgaaaaccagatagcaggtggcccaatggatcatggag 3520023  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccct 360  Q
    ||||||||||||||  | ||||||| |||||| ||||||||| |||||    
T  3520024 aggctctgataccaactaagaaatcgtggttgaacctaacacaaccct 3520071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 216 - 344
Target Start/End: Original strand, 2404297 - 2404424
Alignment:
Q  216 ctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatggatcttgaagag 314  Q
    ||||||||||||||||||| ||||||||||||  |||||||| | | ||||   || |||||||||||||||||||||||| ||||||||| | ||||||    
T  2404297 ctcacgaccagcactattgcgcttggttcgtg--gacataaacggtaggtggtccaatagcggaaacctgatagcaggtgacccaatggatttcgaagag 2404394  T
Q  315 gctctgataccatgttagaaatcatggttg 344  Q
    ||||||||||||| ||||||||| ||||||    
T  2404395 gctctgataccatcttagaaatcgtggttg 2404424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 204 - 354
Target Start/End: Original strand, 33996191 - 33996337
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||| ||||||||||||| || |||||||| ||||||||||||  |||||||||| |||||| | | || |||||||||||||||||||||  ||||||    
T  33996191 ttaactcacaccctcacgatcaacactattgggcttggttcgtg--gacataaatggtgggtggcccgattgcggaaacctgatagcaggtggcccaatg 33996288  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||   | ||||||||||||||||| ||||||||| ||||||| ||||||||    
T  33996289 gat---ggagaggctctgataccatcttagaaatcgtggttgggcctaacac 33996337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 6001547 - 6001695
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||| ||||  ||||||||||||  || ||||||| |||| ||| | |||| |||||||||||||||| ||| | |||     
T  6001547 ttaacacactccctcacgaccagcattattaggcttggttcgtg--gaaataaatggtgggagactcgataggggaaacctgatagcagatgacctaata 6001644  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
     || ||||||||||||||||||||| ||||||||| ||||||||| |||||    
T  6001645 aattttgaagaggctctgataccatcttagaaatcgtggttggacttaaca 6001695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 354
Target Start/End: Complemental strand, 4886526 - 4886387
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    ||||||||||||| ||||||| ||||||||||||  |||||||||| |||||| | | ||||  ||||| ||||||||||||  ||||||||||||| ||    
T  4886526 ccctcacgaccagtactattgggcttggttcgtg--gacataaatggtgggtggctcgatagtagaaacttgatagcaggtggcccaatggatcttggag 4886429  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    || | |||||||||| ||||||||| ||||||| ||||||||    
T  4886428 agaccctgataccatcttagaaatcgtggttgggcctaacac 4886387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 204 - 354
Target Start/End: Original strand, 48661431 - 48661581
Alignment:
Q  204 ttaacacacaccctcacga-ccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    ||||||||| ||||||||| ||| |||||||| ||||||||||||  |||||||||| |||||| | | | ||||||||||||||||||||||   ||||    
T  48661431 ttaacacaccccctcacgaaccaacactattgggcttggttcgtg--gacataaatggtgggtggcccgaaagcggaaacctgatagcaggtggctcaat 48661528  T
Q  302 ggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    || |||| |||||||||||||| ||| ||||||||| |||||||  |||||||    
T  48661529 ggttcttaaagaggctctgatatcatattagaaatcgtggttgggtctaacac 48661581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 204 - 367
Target Start/End: Original strand, 18826365 - 18826527
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||  |||||| ||||| ||| |||| ||||||||||||  | |||||||| |||||| | | ||||||||||  ||||||||| ||   || ||    
T  18826365 ttaacacatcccctcatgaccaacacaattgggcttggttcgtg--gtcataaatggtgggtggctcgatagcggaaatttgatagcagatggctcagtg 18826462  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||||||||||||||||||| ||| |||||||| ||||||| ||||||||| |||| |||||||    
T  18826463 gatcttgaagaggctctgatatcatcttagaaattatggttgaacctaacacaaccccacaaaat 18826527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 28080827 - 28080710
Alignment:
Q  251 acataaatgatggg-tgac-acatagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacc 348  Q
    |||||||||||||| |||| | ||||||||||| ||||||||||||  ||||| ||||||||||||||||||||| ||| ||||||||| |||||||| |    
T  28080827 acataaatgatggggtgaccagatagcggaaacttgatagcaggtggcccaatagatcttgaagaggctctgatatcatcttagaaatcgtggttggatc 28080728  T
Q  349 taacacgaccctacaaaa 366  Q
    |||||  |||| ||||||    
T  28080727 taacataaccccacaaaa 28080710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 250 - 354
Target Start/End: Original strand, 44874499 - 44874604
Alignment:
Q  250 gacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacc 348  Q
    ||||||||||||||||||| | || | |||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||| ||  ||||| | ||    
T  44874499 gacataaatgatgggtgacccgattgtggaaacctgatagcaggtgacccaatggatcttgaagagactctgataccatcttagacattgtggtttggcc 44874598  T
Q  349 taacac 354  Q
    ||||||    
T  44874599 taacac 44874604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 367
Target Start/End: Complemental strand, 21822011 - 21821851
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||| |||||||  || |||||||||  |||||| |||  || || | || ||||||||||||| |||||| ||  |||| |    
T  21822011 ttaacacaccccctcacgaccaacactattatgcctggttcgtg--gacatatatg--ggatggcccaatagcggaaacctgctagcagttggcccaacg 21821916  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
     |||||||||||||||||||||||| ||||||||| ||||||| |||||||| | || |||||||    
T  21821915 tatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaatcccacaaaat 21821851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 9688982 - 9689125
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatgg 303  Q
    ||||||| | ||||||||| || |||||||| ||||||||||||    |||||||  |||||| |    ||||||||||||||||||||||  |||||||    
T  9688982 ttaacaccccccctcacgatcaacactattgggcttggttcgtgg---cataaatcgtgggtggcc---agcggaaacctgatagcaggtggtccaatgg 9689075  T
Q  304 atcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    |||||| ||||||||||||||||| | ||||||  ||||||| |||||||    
T  9689076 atcttggagaggctctgataccatatcagaaattgtggttgggcctaaca 9689125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 31892359 - 31892231
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||  |||||||||| |||||| |   ||| ||||||||||||||||||||  |||||     
T  31892359 ttaacacaccccctcacgaccatcattattgggcttggttcgtg--gacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaata 31892262  T
Q  303 gatcttgaagaggctctgataccatgttaga 333  Q
    | ||||| |||||||||||| |||| |||||    
T  31892261 ggtcttggagaggctctgattccatcttaga 31892231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 336
Target Start/End: Complemental strand, 22574808 - 22574677
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||  ||||||||||| |||||||| |||||||||||   |||||||||| ||||||   | ||||| ||||||||||||||||||  ||||||    
T  22574808 ttaacacaccacctcacgaccaacactattgggcttggttcgta--gacataaatggtgggtggtccgatagctgaaacctgatagcaggtggcccaatg 22574711  T
Q  303 gatcttgaagaggctctgataccatgttagaaat 336  Q
    ||||||| |||| |||| |||||||  |||||||    
T  22574710 gatcttggagagactcttataccatcatagaaat 22574677  T

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Target: chr7; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 3519837 - 3519923
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcag 291  Q
    ||||||||| ||||||||||||||| ||||| |||||||||  ||||||||||||| |||||| | | |||||||||||||||||||||    
T  3519837 ttaacacaccccctcacgaccagcattattgggcttggttc--gtggacataaatggtgggtggcccgatagcggaaacctgatagcag 3519923  T

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Target: chr7; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 275 - 364
Target Start/End: Original strand, 10882186 - 10882275
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaa 364  Q
    ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||    
T  10882186 cggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaa 10882275  T

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Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 247 - 344
Target Start/End: Complemental strand, 20305460 - 20305358
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtg----agccaatggatcttgaagaggctctgataccatgttagaaatcatgg 341  Q
    ||||||||||||| |||||| | | ||||||||||||||||||||| ||    | ||||||||||||||||||||||||||||||| ||| ||||| |||    
T  20305460 gtggacataaatggtgggtggcccgatagcggaaacctgatagcagatgacccatccaatggatcttgaagaggctctgataccatcttaaaaatcgtgg 20305361  T
Q  342 ttg 344  Q
    |||    
T  20305360 ttg 20305358  T

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Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 275 - 359
Target Start/End: Complemental strand, 4507069 - 4506985
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||||| || ||||||||| | |||||  ||||||| ||||    
T  4507069 cggaaatctgatagcaggtgacccaatggatcttgaaaaggctctgatacaatcttagaaatcgtagttgggtctaacacaaccc 4506985  T

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Target: chr7; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 299 - 366
Target Start/End: Original strand, 3038055 - 3038122
Alignment:
Q  299 aatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||||||||||||||||  || ||||||||||||||||| |||||||| |||| ||||||    
T  3038055 aatggatcttgaagaggctctgatattatcttagaaatcatggttgggcctaacacaaccccacaaaa 3038122  T

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Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 2315138 - 2315269
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    |||| |||| |||||||||||| |||||||| ||||||||||||  |||||||||| ||||||   | || ||||||| |||||||||||||  ||||||    
T  2315138 ttaatacaccccctcacgaccaacactattgggcttggttcgtg--gacataaatggtgggtggtccgattgcggaaatctgatagcaggtggcccaatg 2315235  T
Q  303 gatcttgaagaggctctgataccatgttagaaat 336  Q
    || |||| ||| ||| | ||||||| ||||||||    
T  2315236 gaccttggagaagctataataccattttagaaat 2315269  T

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Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 207 - 366
Target Start/End: Original strand, 5871691 - 5871850
Alignment:
Q  207 acacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaatggat 305  Q
    |||||| ||||||||||||||||||||||| |||||||||   |||||||||| | ||| | |  |||||  |||  |||||| ||||||  ||||||||    
T  5871691 acacaccccctcacgaccagcactattgagtttggttcgtt--gacataaatggtaggtcgtccgatagcaaaaatatgatagtaggtgactcaatggat 5871788  T
Q  306 cttgaag-aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||| | | ||||||||||| ||| ||||||||| |||||||  ||||||| |||||||||||    
T  5871789 cttaacggaggctctgatatcatcttagaaatcgtggttgggactaacacaaccctacaaaa 5871850  T

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Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 276 - 366
Target Start/End: Complemental strand, 34027529 - 34027439
Alignment:
Q  276 ggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||| ||||||  |||| | ||| |||||||||||| ||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  34027529 ggaaacctgataacaggtggcccaaagaatcgtgaagaggctctaataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 34027439  T

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Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 31257189 - 31257305
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||| ||  |||| | ||| |||||| ||||||||||||| ||||||||| ||||||| |||    
T  31257189 acataaatgacgggtggcccgataacggaaacctgataacagatggcccaaagaatcgtgaagaagctctgataccatattagaaatcgtggttgggcct 31257288  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  31257289 aacacaaccccacaaaa 31257305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 354
Target Start/End: Original strand, 31485536 - 31485685
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||| || |||||||| | ||| ||||||  || ||||||| |||||| | | |||| | ||||||||||| |||||  ||||||    
T  31485536 ttaacacaccccctcacgaacaacactattgggtttgattcgtg--gatataaatggtgggtggcccgatagtgaaaacctgatagtaggtggcccaatg 31485633  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||| || |||||| ||||||| ||||||||  ||||| | ||||||||    
T  31485634 gatcttgtagcggctcttataccatcttagaaattgtggttaggcctaacac 31485685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 48243171 - 48243214
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtg 247  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  48243171 ttaacacaccccctcacgaccagcactattgagcttggttcgtg 48243214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 275 - 364
Target Start/End: Original strand, 26239862 - 26239952
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaa 364  Q
    ||||||||||||||||||||  |||| |||||||| || ||||||||||||||| ||||||||  |||||||  ||||||| |||| ||||    
T  26239862 cggaaacctgatagcaggtggcccaacggatcttggaggaggctctgataccatcttagaaattgtggttgggtctaacacaaccccacaa 26239952  T

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Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 26561995 - 26562111
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    ||||||||||||||||||   ||| ||||||||||||| ||||||  |||| | ||| ||||||| |||||||||||| ||||||||  ||||||  |||    
T  26561995 acataaatgatgggtgacctgataacggaaacctgataacaggtggcccaaagaatcgtgaagagactctgataccatattagaaatggtggttgagcct 26562094  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||  |||| ||||||    
T  26562095 aacataaccccacaaaa 26562111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 40746145 - 40746233
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtg 294  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||| ||||||   | ||| || |||||||||||||||||    
T  40746145 ttaacacac-ccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtggttcgataacgaaaacctgatagcaggtg 40746233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 271 - 354
Target Start/End: Complemental strand, 10903226 - 10903143
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||| ||||| ||||||  ||||||||||||| ||| ||||||||| ||| |||| |||| |||||||  |||||||    
T  10903226 atagcggaaacatgataacaggtggcccaatggatcttggagaagctctgatatcattttagtaatcgtggttggggctaacac 10903143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 14540853 - 14540905
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaat 258  Q
    |||||||||||||||| |||||||||||||| ||||||||  |||||||||||||    
T  14540853 ttaacacacaccctcatgaccagcactattgggcttggtt--tgtggacataaat 14540905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 308 - 366
Target Start/End: Complemental strand, 17202283 - 17202225
Alignment:
Q  308 tgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||||||||||| ||| ||||| ||||||| |||||||| |||| ||||||    
T  17202283 tgaagaggctctgataccatattaaaaatcgtggttgggcctaacacaaccccacaaaa 17202225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 367
Target Start/End: Original strand, 5871898 - 5871994
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||||||||  |||||||||||||  ||||||||||| | | ||||||||||| ||| ||||||||| |||||||  || |||| ||||||||||||    
T  5871898 atagcggaaatatgatagcaggtgactcaatggatcttaacgcaggctctgatatcatcttagaaatcgtggttgggact-acactaccctacaaaat 5871994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 203 - 294
Target Start/End: Original strand, 30727230 - 30727320
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtg 294  Q
    |||||||||| |||||||| ||| |||||||| |||| |||  |||||| ||||||| |||||| | || ||||||||||||||||| |||||    
T  30727230 tttaacacaccccctcacgcccaacactattgggcttagtt--tgtggatataaatggtgggtggcccaatagcggaaacctgatagaaggtg 30727320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 40121909 - 40121962
Alignment:
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  40121909 aggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 40121962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 40746427 - 40746310
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||| ||  |||| |  || |||||||||||| ||||||| ||||||||  ||||||| |||    
T  40746427 acataaatgacgggtggcccgataacggaaacctgataacagttgccccaaagattcgtgaagaggctctaataccatattagaaattgtggttgggcct 40746328  T
Q  350 aacacgaccctacaaaat 367  Q
    ||||| |||| |||||||    
T  40746327 aacacaaccccacaaaat 40746310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 6782958 - 6782907
Alignment:
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||| ||||||  |||||||| |||| ||||||    
T  6782958 gctctgataccatgttagaaatcgtggttgagcctaacacaaccccacaaaa 6782907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 40898827 - 40898887
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtg 266  Q
    |||||||||||| ||||  ||| ||||||||||||||||||  ||||||||||||| ||||||    
T  40898827 ttaacacacaccgtcacagccaacactattgagcttggttc--gtggacataaatggtgggtg 40898887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 224 - 366
Target Start/End: Original strand, 48417411 - 48417553
Alignment:
Q  224 cagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatggatcttgaag-aggctctgat 322  Q
    ||||||||||| ||||||| | || ||| ||||||| ||| || |  |||||||||||  |||||||||||  ||||||||||  | || ||||||| ||    
T  48417411 cagcactattgggcttggtgcatg-ggatataaatggtggttgcccgatagcggaaacaagatagcaggtggcccaatggatcaaggagaaggctctaat 48417509  T
Q  323 accatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||| | ||||||  ||||||| |||||||| |||| ||||||    
T  48417510 accatctaagaaattgtggttgggcctaacacaaccccacaaaa 48417553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 308
Target Start/End: Original strand, 1936224 - 1936327
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||||  | ||| ||||| |||||||| || ||||||||   |||||||||| | |||| |  ||||||||||||||||| |||||||  |||||    
T  1936224 tttaacacacctcttcatgaccaacactattgggcatggttcgtt--gacataaatggtaggtggctgatagcggaaacctgataacaggtgattcaatg 1936321  T
Q  303 gatctt 308  Q
    ||||||    
T  1936322 gatctt 1936327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 140 - 178
Target Start/End: Original strand, 3038133 - 3038171
Alignment:
Q  140 acgtgagaatttcccccacttataaacacattgttagac 178  Q
    ||||||| ||| |||||||||||||||||||||||||||    
T  3038133 acgtgaggattgcccccacttataaacacattgttagac 3038171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 354
Target Start/End: Original strand, 22339552 - 22339629
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||| |||||||||  |||||||||||| | | ||||||||||||||| ||||||||  | ||||| ||||||||    
T  22339552 aaacctggtagcaggtggtccaatggatcttaacggaggctctgataccatattagaaattgtcgttgggcctaacac 22339629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Complemental strand, 9625545 - 9625493
Alignment:
Q  284 gatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaat 336  Q
    |||||||||||   |||||||||||||| ||| ||||||||||| ||||||||    
T  9625545 gatagcaggtggttcaatggatcttgaaaaggttctgataccatcttagaaat 9625493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 11743141 - 11743097
Alignment:
Q  299 aatggatcttgaagaggctctgataccatgttagaaatcatggtt 343  Q
    ||||||||||||||||||||||||| ||| ||| ||||| |||||    
T  11743141 aatggatcttgaagaggctctgatatcatcttaaaaatcgtggtt 11743097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 23839128 - 23839164
Alignment:
Q  142 gtgagaatttcccccacttataaacacattgttagac 178  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  23839128 gtgaggatttcccccacttataaacagattgttagac 23839164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 8e-40; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 95378 - 95526
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| |||||| | | || |||||||||||||||||||||  ||||||    
T  95378 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcccgatggcggaaacctgatagcaggtggcccaatg 95475  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||| |||||||    
T  95476 gatcttggagaggctctgataccatcttagaaatcgtggttgggcctaaca 95526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 24346613 - 24346775
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||| | | ||| ||||||||||||||||||||  ||||||    
T  24346613 ttaacacaccccctcacgaccagcactattgagcttggttc--gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatg 24346710  T
Q  303 gatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||| || |||||||||||||||| ||| ||||| |||||||  ||||||| |||| ||||||    
T  24346711 gatcttggaggaggctctgataccatcttaaaaatcgtggttgggtctaacacaaccccacaaaa 24346775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 41666869 - 41667031
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||| |||||| | | ||| ||||||||||||||||||||  |||| |    
T  41666869 ttaacacaccccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaacg 41666966  T
Q  303 gatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||| || |||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  41666967 gatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 41667031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 9368802 - 9368641
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    |||| |||| ||||||||||||||||||||| | ||||||||||  |||||| ||| ||||||   || |||||||||||||||||||||||  ||||||    
T  9368802 ttaagacaccccctcacgaccagcactattgggtttggttcgtg--gacatacatggtgggtggtccaatagcggaaacctgatagcaggtggcccaatg 9368705  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||||  |||||||| |||||||| |||||||| |||| ||||||    
T  9368704 gatcttgaagaggctctgataccaccttagaaattatggttgggcctaacacaaccccacaaaa 9368641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 15480529 - 15480368
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||  ||||||||||||||| |||  ||||||||| ||  |||||||||| |||||| | || |||||||||||||||||||||||  ||||||    
T  15480529 ttaacacacctcctcacgaccagcacgattaggcttggttcatg--gacataaatggtgggtggcccaatagcggaaacctgatagcaggtggcccaatg 15480432  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||||| ||||||||| ||||||| |||||||  |||| ||||||    
T  15480431 gatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacagaaccccacaaaa 15480368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 18333577 - 18333737
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||||||||| || ||||||||||||  |||||||||| |||||| | | |||||| |||||||||||||||||  || |||    
T  18333577 ttaacacac-ccctcacgaccagcactaatgggcttggttcgtg--gacataaatggtgggtggcccgatagcgaaaacctgatagcaggtggcccgatg 18333673  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||||| |||||| || ||||||| |||||||| |||| ||||||    
T  18333674 gatcttgaagaggctctgataccatcttagaattcgtggttgggcctaacacaaccccacaaaa 18333737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 24269982 - 24270143
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| |||||| | | ||| ||||||||||||||||||||  ||||||    
T  24269982 ttaacacaccccctcacgaccagcactattgagcttggttc--gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggcccaatg 24270079  T
Q  303 gatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||| || |||||||||||||||| ||| ||||| |||||||  ||||||| |||| ||||||    
T  24270080 gatcttggaggaggctctgataccatcttaaaaatcgtggttgg-tctaacacaaccccacaaaa 24270143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 214 - 365
Target Start/End: Complemental strand, 43117844 - 43117694
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    |||||||||||| |||||||||||||||||||||  |||||||||||||||||   | ||||||||||||||||||||||||  ||||| ||||||| |     
T  43117844 ccctcacgaccaacactattgagcttggttcgtg--gacataaatgatgggtggtccgatagcggaaacctgatagcaggtggcccaatagatcttggaa 43117747  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaa 365  Q
    |||||||||||| || ||||||||| | ||||| |||||||| |||| |||||    
T  43117746 aggctctgatactatcttagaaatcgttgttgggcctaacacaaccccacaaa 43117694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 367
Target Start/End: Complemental strand, 24531806 - 24531644
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| ||||||   | ||| | |||| |||||||||||||  ||||||    
T  24531806 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatgttgggtggttcgataacagaaaactgatagcaggtggcccaatg 24531709  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    |||| |  ||||||||||||||||| ||||||||| ||||||| | |||||| |||| |||||||    
T  24531708 gatcatagagaggctctgataccatcttagaaatcgtggttgggcataacacaaccccacaaaat 24531644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 354
Target Start/End: Original strand, 6919306 - 6919455
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||||| |||||||||||||||||| ||||||||||||  |||||||||| || |||   | | ||||||||||||||||||| |||  |||||    
T  6919306 ttaacacacaccatcacgaccagcactattgggcttggttcgtg--gacataaatggtgagtggtccgaaagcggaaacctgatagcagatgactcaatg 6919403  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||||| ||||||||| ||| ||||| ||||||  ||||||||    
T  6919404 gatcttgaagaggctttgataccatcttaaaaatcgtggttgagcctaacac 6919455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 32908830 - 32908990
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| | |||||||||   |||||||||| |||||||| | ||||| ||||||||||||||| ||  ||||||    
T  32908830 ttaacacac-ccctcacgaccagcactattgggtttggttcgtt--gacataaatggtgggtgacccgatagcagaaacctgatagcagatggcccaatg 32908926  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||| ||| ||| ||||||||  ||||||   ||||||| |||| ||||||    
T  32908927 gatcttgaagaggctctaatatcatcttagaaattgtggttgagtctaacacaaccccacaaaa 32908990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 17352546 - 17352693
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||  ||| |||||||||| ||||| ||||||||||||  |||||||| | | |||||| || ||||||||||||||||||| |||   ||| |    
T  17352546 ttaacacacctccttacgaccagcattattgggcttggttcgtg--gacataaacggtaggtgacccaatagcggaaacctgatagcaagtggctcaa-g 17352642  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    ||||||||||||||||||||||||| ||||||||  |||||||||||||||    
T  17352643 gatcttgaagaggctctgataccatcttagaaatggtggttggacctaaca 17352693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 204 - 344
Target Start/End: Original strand, 25258178 - 25258317
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||| |||||||| ||||  ||||||||||||  |||||||||  ||||||   | ||||||||||||||||||||||||  ||||||    
T  25258178 ttaacacaccccctcatgaccagcattatttggcttggttcgtg--gacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatg 25258275  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttg 344  Q
    ||||||| ||| ||||||||||||| ||||||||| ||||||    
T  25258276 gatcttggagaagctctgataccatcttagaaatcgtggttg 25258317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 204 - 344
Target Start/End: Original strand, 25321968 - 25322107
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||| |||||||| ||||  ||||||||||||  |||||||||  ||||||   | ||||||||||||||||||||||||  ||||||    
T  25321968 ttaacacaccccctcatgaccagcattatttggcttggttcgtg--gacataaattgtgggtggtccgatagcggaaacctgatagcaggtggcccaatg 25322065  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttg 344  Q
    ||||||| ||| ||||||||||||| ||||||||| ||||||    
T  25322066 gatcttggagaagctctgataccatcttagaaatcgtggttg 25322107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 277 - 366
Target Start/End: Original strand, 2063683 - 2063772
Alignment:
Q  277 gaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  2063683 gaaacctgataacatgtgatccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 2063772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 24528747 - 24528586
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||| ||| |||||||||  ||||||||||||  |||||||||| ||||||   | |||   |||| || ||||||||||  ||||||    
T  24528747 ttaacacaccccctcatgacaagcactattaggcttggttcgtg--gacataaatgttgggtggttcgataatagaaaactaatagcaggtggtccaatg 24528650  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||| || ||||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  24528649 gatcatggagaggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaa 24528586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 204 - 359
Target Start/End: Original strand, 17150345 - 17150499
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||| | || ||||||||   ||||||  | |||||||||||| |||||| | | |||||||||||||||||| |||||  ||||||    
T  17150345 ttaacacaccccctcacaaacaacactattggtattggtt--tctggacataaatggtgggtggcccgatagcggaaacctgatagtaggtggcccaatg 17150442  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||||||||||||||||||||||| ||| ||||| | ||||  |||||||| ||||    
T  17150443 gatcttgaagaggctctgataccatcttaaaaatcgtagttgagcctaacacaaccc 17150499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 326
Target Start/End: Original strand, 8081226 - 8081347
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||| ||||| | |  |||| ||| |||||||||||||||  |||||     
T  8081226 ttaacacaccccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtggtccgataggggatacctgatagcaggtggcccaatc 8081323  T
Q  303 gatcttgaagaggctctgatacca 326  Q
    ||||||| ||| ||||||||||||    
T  8081324 gatcttggagaagctctgatacca 8081347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 347
Target Start/End: Original strand, 20510754 - 20510895
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||| || |||||||| |||||||||  |||||||||||||  ||||| | | ||||| |||||||||||||||||   ||| ||    
T  20510754 ttaacacaccccctcacgatcatcactattgggcttggttc--gtggacataaatg-ggggtggcccaatagcagaaacctgatagcaggtagcccagtg 20510850  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggac 347  Q
    ||||||| ||| ||||||||||||| ||| ||||||||| |||||    
T  20510851 gatcttggagacgctctgataccatcttaaaaatcatggctggac 20510895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 227 - 345
Target Start/End: Original strand, 16704618 - 16704735
Alignment:
Q  227 cactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgatacc 325  Q
    |||||||| ||||||||||||  ||||||||||||| ||||| | ||||| ||||| |||||||||||   |||| |||| ||||||| ||||||||| |    
T  16704618 cactattgggcttggttcgtg--gacataaatgatgagtgacccgatagctgaaacatgatagcaggtagcccaaaggatattgaagaagctctgatatc 16704715  T
Q  326 atgttagaaatcatggttgg 345  Q
    || |||||||||||||||||    
T  16704716 attttagaaatcatggttgg 16704735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 204 - 367
Target Start/End: Original strand, 38731715 - 38731877
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgac--acatagcggaaacctgatagcaggtgagc-caa 300  Q
    ||||||||| ||||||||||||||||||||| |||||||||   ||||||||||||||||||| |    ||||| ||||||||||||||||| ||| |||    
T  38731715 ttaacacac-ccctcacgaccagcactattgggcttggttc--atggacataaatgatgggtgcccgtgatagcagaaacctgatagcaggt-agctcaa 38731810  T
Q  301 tggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    || || ||||||||||| ||||| ||| ||||||||  ||||||  |||||||| |||  |||||||    
T  38731811 tgaattttgaagaggctatgatagcatcttagaaatggtggttgtgcctaacacaacctcacaaaat 38731877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 337
Target Start/End: Original strand, 6413575 - 6413666
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatc 337  Q
    ||||||||||||| |||||| | | |||| ||| |||||||||||||||  ||||||||||||||||||||| ||||||||| |||||||||    
T  6413575 gtggacataaatggtgggtggctcgatagtggatacctgatagcaggtggcccaatggatcttgaagaggctttgataccatattagaaatc 6413666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 8098479 - 8098363
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||||||| ||||||| | |    
T  8098479 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggctt 8098380  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  8098379 aacacaaccccacaaaa 8098363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 21209843 - 21209959
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||||| | ||| ||||||||||||| ||||||  |||| | ||| |||||||||||| ||||||| ||||||||| ||||||| | |    
T  21209843 acataaatgacgggtgacccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctaataccatattagaaatcgtggttgggctt 21209942  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  21209943 aacacaaccccacaaaa 21209959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 271 - 318
Target Start/End: Original strand, 13700768 - 13700815
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctc 318  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13700768 atagcggaaacctgatagcaggtgacccaatggatcttgaagaggctc 13700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 214 - 367
Target Start/End: Complemental strand, 20225238 - 20225086
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgat-gggtgacacatagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    ||||||||||||| ||||||||| ||||||  |||||| ||||||  | ||||| |  | | |||||||| ||||| | |||   |||||||||||||||    
T  20225238 ccctcacgaccagtactattgagtttggtt--tgtggatataaatagtagggtgcccgaaaacggaaaccagatagtaagtggcacaatggatcttgaag 20225141  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||| ||||| ||| ||||||||| |||||| ||||||||| |||| |||||||    
T  20225140 aggctatgatatcattttagaaatcgtggttgaacctaacacaaccccacaaaat 20225086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 245 - 337
Target Start/End: Original strand, 27133143 - 27133236
Alignment:
Q  245 gtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatc 337  Q
    ||||| |||||||||| ||||||| | ||| ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| |||||||||    
T  27133143 gtgtgaacataaatgacgggtgacccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatc 27133236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 26137221 - 26137370
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    |||| |||| |||||||||| |||| |||||  |||||||||||  ||||||||||||||||| | | || | | |||||||||||||||||  ||||      
T  26137221 ttaatacaccccctcacgactagcattattggacttggttcgtg--gacataaatgatgggtggcccgatggtgaaaacctgatagcaggtggcccaaca 26137318  T
Q  303 gatcttgaag-aggctctgataccatgttagaaatcatggttggacctaaca 353  Q
     |||||| || ||||||||||||||  ||||||||| ||||||| |||||||    
T  26137319 aatcttggagtaggctctgataccaccttagaaatcgtggttgggcctaaca 26137370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 33337350 - 33337435
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagca 290  Q
    ||||||||| |||||| |||||||||||||| |||||||||  ||||||||||||| |||||| | | || |||||||||||||||||    
T  33337350 ttaacacaccccctcatgaccagcactattgggcttggttc--gtggacataaatggtgggtggcccgatggcggaaacctgatagca 33337435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 313 - 366
Target Start/End: Original strand, 8081098 - 8081151
Alignment:
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  8081098 aggctctgataccatcttagaaatcatggttgggcctaacacaaccccacaaaa 8081151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 311
Target Start/End: Complemental strand, 15590145 - 15590039
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| | |||||||  ||||||||||||| || || | |  ||||||||||| ||||||||||||  |||||     
T  15590145 ttaacacaccccctcacgaccagcactattgggtttggttc--gtggacataaatggtgagtagcccgatagcggaaacttgatagcaggtggcccaata 15590048  T
Q  303 gatcttgaa 311  Q
     ||||||||    
T  15590047 aatcttgaa 15590039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 359
Target Start/End: Original strand, 11896625 - 11896713
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    |||||| |||||||||| |||||    |||||||| ||||||||| ||||||||||| ||||||||| |||||  ||||||||| ||||    
T  11896625 atagcgaaaacctgataacaggtatctcaatggattttgaagaggttctgataccatattagaaatcgtggttaaacctaacacaaccc 11896713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 17016382 - 17016423
Alignment:
Q  313 aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||||||||||||||| ||||||| ||||||||    
T  17016382 aggctctgataccatgttagaaatcgtggttgggcctaacac 17016423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 365
Target Start/End: Original strand, 1028383 - 1028435
Alignment:
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaa 365  Q
    ||||||||||||||||||||||||  ||||||| |||||||| |||| |||||    
T  1028383 aggctctgataccatgttagaaatggtggttgggcctaacacaaccccacaaa 1028435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 13296776 - 13296725
Alignment:
Q  308 tgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||||||||| |||||||| ||||||||| ||||||| |||||||| ||||    
T  13296776 tgaagaggctccgataccatcttagaaatcgtggttgggcctaacacaaccc 13296725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 30770161 - 30770221
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtg 266  Q
    ||||||||| ||||||| |||||| |||||| |||||||||  ||||||||||||| ||||||    
T  30770161 ttaacacaccccctcacaaccagcgctattgggcttggttc--gtggacataaatggtgggtg 30770221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 327
Target Start/End: Original strand, 30770226 - 30770269
Alignment:
Q  284 gatagcaggtgagccaatggatcttgaagaggctctgataccat 327  Q
    |||||||||||  ||||||||||||| |||||||||||||||||    
T  30770226 gatagcaggtggcccaatggatcttggagaggctctgataccat 30770269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 24487625 - 24487671
Alignment:
Q  308 tgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||||||||||||||||| ||||||||| ||||||| | ||||||    
T  24487625 tgaagaggctctgataccatattagaaatcgtggttgggcttaacac 24487671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 294
Target Start/End: Complemental strand, 6415880 - 6415790
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtg 294  Q
    ||||||||||| |||||| |||| |||||||| |||||||||  ||||||||||| | ||| |||| | |||| ||| || ||||||||||||    
T  6415880 tttaacacacaacctcacaaccaacactattgggcttggttc--gtggacataaacggtggatgacccgatagtggagacttgatagcaggtg 6415790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 323
Target Start/End: Original strand, 11896309 - 11896386
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgata 323  Q
    ||||||||||||| ||||||   | |||||||||||||||||| |||||   |||||||||||| ||||| |||||||    
T  11896309 gtggacataaatggtgggtggtccgatagcggaaacctgatagtaggtggcacaatggatcttggagaggttctgata 11896386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 17015988 - 17016069
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgata 287  Q
    |||||||| ||||||||||||| ||||||||  ||||||||  ||||||||||||| ||||| | |  |||||||||||||||||    
T  17015988 ttaacaca-accctcacgaccaacactattggacttggttc--gtggacataaatggtgggtggtccgatagcggaaacctgata 17016069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 366
Target Start/End: Original strand, 7133956 - 7134047
Alignment:
Q  274 gcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||| ||||||||||||| |   | ||||||| ||||||||||||| ||| ||||||||  ||||||| |||| ||| |||| ||||||    
T  7133956 gcggaaacttgatagcaggtgatctggtagatcttggagaggctctgatatcatattagaaattgtggttgg-cctagcacaaccccacaaaa 7134047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 18885434 - 18885394
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttc 244  Q
    ||||||||| | ||||||||||||||||||| |||||||||    
T  18885434 ttaacacaccctctcacgaccagcactattgggcttggttc 18885394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 3e-39; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 204 - 344
Target Start/End: Complemental strand, 6218411 - 6218272
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||| |||  ||||||||||||||||||   |||||||||||||||||| |||||| ||||||    
T  6218411 ttaacacaccccctcacgaccagcactattgggcttggttcttgt--acataaatgatgggtgacctgatagcggaaacctgatagtaggtgatccaatg 6218314  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttg 344  Q
    ||||||| ||||||||||||||||| ||||||||| ||||||    
T  6218313 gatcttggagaggctctgataccatcttagaaatcgtggttg 6218272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 204 - 345
Target Start/End: Original strand, 28245638 - 28245778
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| || |||||||||||||||||| ||||||||||||  |||||||||| |||||| | | ||||||||||||||||||||||||  ||||||    
T  28245638 ttaacacaccccatcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatg 28245735  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    ||||||| ||||||||||||||||| ||||||||| |||||||    
T  28245736 gatcttggagaggctctgataccatattagaaatcgtggttgg 28245778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 40717318 - 40717479
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||  ||||||||  |||||||||||||| ||||||   | |||||||||||||||| |||||||  ||||||    
T  40717318 ttaacacaccccctcacgaccagcactattaggcttggtt--tgtggacataaatggtgggtggtccgatagcggaaacctgatggcaggtggcccaatg 40717415  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||| ||| ||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  40717416 gatattggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 40717479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 35796854 - 35797015
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||  || ||||||| |||||| | | |||||||||||||||||||||||   ||||||    
T  35796854 ttaacacaccccctcacgaccagcactattgggcttggttcgtg--gagataaatggtgggtggcccgatagcggaaacctgatagcaggtagtccaatg 35796951  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||| ||||||||||||||||||| ||||||||  | ||||| | |||||| |||| ||||||    
T  35796952 gatctcgaagaggctctgataccatcttagaaatggtagttgggcttaacacaaccccacaaaa 35797015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 22231185 - 22231346
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||  |||||| ||  |||||||||| ||||||||||||  |||||||||| | |||| | | ||||||||||||||||||||||||  ||||||    
T  22231185 ttaacacatcccctcatgatgagcactattgggcttggttcgtg--gacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccaatg 22231282  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||| ||| ||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  22231283 gattttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 22231346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 214 - 354
Target Start/End: Original strand, 35819015 - 35819154
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    ||||||| ||||||||||||| ||||||||||||  |||||||||| |||||||| | ||||||||||||||||||||||||  ||||||||||||  ||    
T  35819015 ccctcacaaccagcactattgggcttggttcgtg--gacataaatggtgggtgacccgatagcggaaacctgatagcaggtggcccaatggatcttagag 35819112  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    || ||||||| |||| ||| ||||| ||||||| ||||||||    
T  35819113 agactctgatgccatcttaaaaatcgtggttgggcctaacac 35819154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 214 - 359
Target Start/End: Complemental strand, 35788857 - 35788712
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||| |||||| |   ||| ||||||||||||||||||||  |||| |||||||| ||    
T  35788857 ccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcctgataacggaaacctgatagcaggtggcccaacggatcttggag 35788760  T
Q  313 -aggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
     ||||||||||||||| ||||||||| ||||||| |||||||| ||||    
T  35788759 gaggctctgataccatcttagaaatcgtggttgggcctaacacaaccc 35788712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 204 - 354
Target Start/End: Original strand, 50543442 - 50543593
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagcca--a 300  Q
    ||||||||| |||||||||||| |||||||| |||||||||  ||||||||||||| |||||| | | ||| ||||||||||||||||||||  | |  |    
T  50543442 ttaacacaccccctcacgaccaacactattgggcttggttc--gtggacataaatggtgggtggcccgataacggaaacctgatagcaggtggtcaaata 50543539  T
Q  301 tggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||| ||||||||||||| ||| ||||||||| ||||||| ||||||||    
T  50543540 tggatcttggagaggctctgatatcatcttagaaatcgtggttgggcctaacac 50543593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 209 - 344
Target Start/End: Complemental strand, 4645844 - 4645710
Alignment:
Q  209 acacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatct 307  Q
    |||| |||||||||||| |||| ||| ||||| ||||||  ||||||| || |||||| | | ||||||||||||||||||||||||| |||||||||||    
T  4645844 acaccccctcacgaccaacacttttgggcttgattcgtg--gacataattggtgggtggcccgatagcggaaacctgatagcaggtgacccaatggatct 4645747  T
Q  308 tgaagaggctctgataccatgttagaaatcatggttg 344  Q
    |  |||||||||||||| || ||| ||||||||||||    
T  4645746 ttgagaggctctgatactatcttataaatcatggttg 4645710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 201 - 366
Target Start/End: Complemental strand, 52559779 - 52559613
Alignment:
Q  201 tttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagcc- 298  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||  ||||||||||||| |||||| | | ||| |  |||| ||||||||||||  ||     
T  52559779 tttttaacacaccccctcacaaccagcactattgggcttggttc--gtggacataaatggtgggtggcccgataacataaacttgatagcaggtggccca 52559682  T
Q  299 aatggatc-ttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    || ||||| |||| ||||||||||||| || ||||||||||||||||| |||||||| |||| ||||||    
T  52559681 aacggatctttgaggaggctctgatactatcttagaaatcatggttgggcctaacacaaccccacaaaa 52559613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 203 - 353
Target Start/End: Original strand, 30530038 - 30530187
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    |||||||||||||||||| |||| |||||||||||||||||| |  |  |||  ||| |||||||| | |||||||||| |||||||||||||  | |||    
T  30530038 tttaacacacaccctcacaaccatcactattgagcttggttcataag--catcgatggtgggtgacgcgatagcggaaatctgatagcaggtggcctaat 30530135  T
Q  302 ggatcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    |||||||| ||||||||||||||||| ||||||||  ||||||  |||||||    
T  30530136 ggatcttggagaggctctgataccatcttagaaattgtggttgagcctaaca 30530187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 354
Target Start/End: Complemental strand, 7926541 - 7926386
Alignment:
Q  192 atgtggggctttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagca 290  Q
    ||||||| || |||||||||| |||||||||| | || ||||| ||||||||||||         |||||||||| | | |||| |||||||||||||||    
T  7926541 atgtgggactctttaacacaccccctcacgactaccattattgggcttggttcgtgg--------atgatgggtggccctatagtggaaacctgatagca 7926450  T
Q  291 ggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||  ||||||||||||| ||||||||||||||||| || |||||| ||||||| ||||||||    
T  7926449 ggtggcccaatggatcttggagaggctctgataccatcttcgaaatcttggttgggcctaacac 7926386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 204 - 330
Target Start/End: Original strand, 27634193 - 27634318
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||| | ||||||||||||||||||||| ||||||||||||  ||||||||   ||||||   | ||||| |||||||||||||| |||  ||||||    
T  27634193 ttaacaccccccctcacgaccagcactattgggcttggttcgtg--gacataaacagtgggtggtccgatagcagaaacctgatagcaagtggtccaatg 27634290  T
Q  303 gatcttgaagaggctctgataccatgtt 330  Q
    ||||||| ||||||||||||||||||||    
T  27634291 gatcttggagaggctctgataccatgtt 27634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 204 - 353
Target Start/End: Original strand, 13555359 - 13555502
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatgg 303  Q
    ||||||| | ||||||||| || |||||||| ||||||||||||    |||||||  |||||| |    ||||||||||||||||||||||  |||||||    
T  13555359 ttaacaccccccctcacgatcaacactattgggcttggttcgtgg---cataaatcgtgggtggcc---agcggaaacctgatagcaggtggtccaatgg 13555452  T
Q  304 atcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    |||||| ||||||||||||||||| | ||||||  ||||||| |||||||    
T  13555453 atcttggagaggctctgataccatatcagaaattgtggttgggcctaaca 13555502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 12869185 - 12869301
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||||| | ||| ||||||||||||| |||||| |||||   ||| ||||||| |||||||||||| ||||||||| ||||||| |||    
T  12869185 acataaatgacgggtgacccgataacggaaacctgataacaggtgggccaaaaaatcgtgaagagactctgataccatcttagaaatcgtggttgggcct 12869284  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  12869285 aacacaaccccacaaaa 12869301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 367
Target Start/End: Original strand, 36686021 - 36686180
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||||||||||||||||||||||||  ||||   || |  |  |||||||| |||||| | | ||||||||||||||||||||||||  ||| ||    
T  36686021 ttaacacacaccctcacgaccagcactattaggctt---tcatagg--cataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccattg 36686115  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
     |||||||||||||||| |||| || ||| ||||||||||||| | |||||| | || |||||||    
T  36686116 aatcttgaagaggctcttatactatcttaaaaatcatggttgggcataacacaatcccacaaaat 36686180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 4464458 - 4464340
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaa-gaggctctgataccatgttagaaatcatggttggacc 348  Q
    ||||| ||| |||||||| | ||| |||||||||||||||| |||| ||||||||||||||| |||||||||||||||| |||||| || |||||||  |    
T  4464458 acatatatggtgggtgactcgataacggaaacctgatagcatgtgacccaatggatcttgaaggaggctctgataccatcttagaattcgtggttgggtc 4464359  T
Q  349 taacacgaccctacaaaat 367  Q
    |||||  |||| |||||||    
T  4464358 taacaaaaccccacaaaat 4464340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 294
Target Start/End: Original strand, 5398587 - 5398676
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtg 294  Q
    ||||||||| ||||||||||||||||||||  |||||||||  ||||||||||||| ||||| | |  ||||||||||||||||||||||||    
T  5398587 ttaacacaccccctcacgaccagcactatttggcttggttc--gtggacataaatggtgggtggtccgatagcggaaacctgatagcaggtg 5398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 332
Target Start/End: Original strand, 35645279 - 35645404
Alignment:
Q  206 aacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatgga 304  Q
    ||||||| |||||||||||||||| |||| | ||||||||||  ||||||||||  ||||| | | ||||||||||| |||||||| |||  || |||||    
T  35645279 aacacaccccctcacgaccagcacaattgggtttggttcgtg--gacataaatggcgggtggcccgatagcggaaacttgatagcatgtggccccatgga 35645376  T
Q  305 tcttgaagaggctctgataccatgttag 332  Q
    || |  ||||||||||||||||||||||    
T  35645377 tcgttgagaggctctgataccatgttag 35645404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 332
Target Start/End: Original strand, 35645568 - 35645693
Alignment:
Q  206 aacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatgga 304  Q
    ||||||| |||||||||||||||| |||| | ||||||||||  ||||||||||  ||||| | | ||||||||||| |||||||| |||  || |||||    
T  35645568 aacacaccccctcacgaccagcacaattgggtttggttcgtg--gacataaatggcgggtggcccgatagcggaaacttgatagcatgtggccccatgga 35645665  T
Q  305 tcttgaagaggctctgataccatgttag 332  Q
    || |  ||||||||||||||||||||||    
T  35645666 tcgttgagaggctctgataccatgttag 35645693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 365
Target Start/End: Original strand, 40716542 - 40716658
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaa-gaggctctgataccatgttagaaatcatggttggacc 348  Q
    |||||||||| ||||| | | ||| ||||||||||||||||||||  |||| ||||| || | |||||||||||||||| ||||||| ||||||||| ||    
T  40716542 acataaatgacgggtggcccgataacggaaacctgatagcaggtggcccaacggatcgtggatgaggctctgataccatcttagaaaccatggttgggcc 40716641  T
Q  349 taacacgaccctacaaa 365  Q
    |||||| |||| |||||    
T  40716642 taacacaaccccacaaa 40716658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 53814851 - 53814967
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||||| | ||| | ||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||||||| ||||||| | |    
T  53814851 acataaatgacgggtgacccgataacagaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggctt 53814950  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  53814951 aacacaaccccacaaaa 53814967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 251 - 353
Target Start/End: Original strand, 4905658 - 4905761
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    ||||||||| |||||| | | ||||| ||||||| ||||||||||  |||||||| |||| ||||||||||||| ||| ||||||||||||||||  |||    
T  4905658 acataaatggtgggtggcccgatagcagaaacctaatagcaggtggcccaatggagcttggagaggctctgatatcatcttagaaatcatggttgagcct 4905757  T
Q  350 aaca 353  Q
    ||||    
T  4905758 aaca 4905761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 203 - 351
Target Start/End: Original strand, 6666511 - 6666658
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    ||||||||||||||||||| | |||||||||| |||||||  |  |||| ||||||| |||||||| | ||||  ||| ||| ||||||||||  ||||     
T  6666511 tttaacacacaccctcacgcctagcactattgggcttggt--gcatggatataaatggtgggtgacccgatagaagaatccttatagcaggtggcccaac 6666608  T
Q  302 ggatcttgaagaggctctgataccatgttagaaatcatggttggacctaa 351  Q
     ||||||| ||||| ||| ||||||| ||||||||| ||||||| |||||    
T  6666609 agatcttgtagaggttctaataccatcttagaaatcgtggttgggcctaa 6666658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 204 - 359
Target Start/End: Original strand, 11036623 - 11036777
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||  ||||||||||| ||| ||||||||||||||| ||  ||||| |||| |||||| |   ||||||||||||| |||| |||||  ||||||    
T  11036623 ttaacacaacccctcacgacctgcaatattgagcttggttcatg--gacattaatggtgggtggcctgatagcggaaacctaatagtaggtggcccaatg 11036720  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||||  || |||||||||||||| ||| ||||  ||||| | |||||||| ||||    
T  11036721 gatcttagagtggctctgataccatcttaaaaattgtggttaggcctaacacaaccc 11036777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 354
Target Start/End: Complemental strand, 9685560 - 9685456
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  |||| | ||  |||||||||||||||||||| ||||||||| ||||||| |||    
T  9685560 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcct 9685461  T
Q  350 aacac 354  Q
    |||||    
T  9685460 aacac 9685456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 366
Target Start/End: Original strand, 14783137 - 14783225
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||| ||||||  |||| | ||  |||||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  14783137 aaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 14783225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 351
Target Start/End: Original strand, 21646379 - 21646524
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatgg 303  Q
    |||| ||| ||||||||||||| ||||||||  |||||||| ||  |||||||||| |||  | |  |||| | |||| ||||||||||||| ||||||     
T  21646379 ttaatacataccctcacgaccaacactattggacttggttcatg--gacataaatggtggtggtccgatagtgaaaacatgatagcaggtgacccaatga 21646476  T
Q  304 atcttgaagaggctctgataccatgttagaaatcatggttggacctaa 351  Q
    |||||| |||| |||| ||||||| ||| ||||| ||||||| |||||    
T  21646477 atcttggagagactctaataccatcttaaaaatcgtggttgggcctaa 21646524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 365
Target Start/End: Original strand, 24513302 - 24513397
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaa 365  Q
    |||||||||  |||||||||| ||  ||||| |||||| || |||||||||||| ||||||||||||| || |||| |||||||| ||||||||||    
T  24513302 atagcggaagtctgatagcagatggtccaatagatcttagaggaggctctgatatcatgttagaaatcgtgattgggcctaacacaaccctacaaa 24513397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 34357973 - 34358068
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||| || |||  ||||| ||||||| ||||||||||||| ||| ||||||||| || |||  |||||||| |||| ||||||    
T  34357973 atagcggaaacctgataacaagtggcccaatagatcttgtagaggctctgatatcatcttagaaatcgtgtttgagcctaacacaaccccacaaaa 34358068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 1518298 - 1518210
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||| ||||||  |||| | ||| |||| ||||||||||||||| ||||||||| ||||| | |||||||| |||| ||||||    
T  1518298 aaacctgataacaggtggcccaaagaatcgtgaaaaggctctgataccatcttagaaatcgtggttaggcctaacacaaccccacaaaa 1518210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 204 - 314
Target Start/End: Original strand, 5398323 - 5398431
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||| || ||||| ||||||||||||  |||||||||| ||||||   | |||| |||||||||||||||| ||| ||| ||    
T  5398323 ttaacacac-ccctcacgaccaacattattgggcttggttcgtg--gacataaatggtgggtggtccgataggggaaacctgatagcagatgacccattg 5398419  T
Q  303 gatcttgaagag 314  Q
    ||||||| ||||    
T  5398420 gatcttggagag 5398431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 192 - 330
Target Start/End: Original strand, 12005570 - 12005709
Alignment:
Q  192 atgtggggctttttaacacacaccc-tcacgaccagcactattgagcttggttcgt--gtggacataaatgatgggt-gacacatagcggaaacctgata 287  Q
    ||||||| || |||||||||||||| |||||||||||||||||| |||| ||| ||  || |||||||||| || || | |  |||||||||||||||||    
T  12005570 atgtgggactctttaacacacacccctcacgaccagcactattgggctt-gttggttcgttgacataaatggtgtgtggcctgatagcggaaacctgata 12005668  T
Q  288 gcaggtgagccaatggatcttgaagaggctctgataccatgtt 330  Q
    | |||||| ||| |||||||||  | |||| ||||||||||||    
T  12005669 gtaggtgacccagtggatcttg--gcggctttgataccatgtt 12005709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 298 - 366
Target Start/End: Complemental strand, 22445566 - 22445498
Alignment:
Q  298 caatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||||||||||||||||||||| |||||| |  |||||||  ||||||| |||| ||||||    
T  22445566 caatggatcttgaagaggctctgataccatcttagaatttgtggttgggtctaacacaaccccacaaaa 22445498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 251 - 354
Target Start/End: Original strand, 54054960 - 54055064
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  ||||   ||| |||||||||||||||||||| ||||||| | ||||||| |||    
T  54054960 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaaaaatcgtgaagaggctctgataccatattagaaagcgtggttgggcct 54055059  T
Q  350 aacac 354  Q
    |||||    
T  54055060 aacac 54055064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 299 - 366
Target Start/End: Complemental strand, 17111676 - 17111609
Alignment:
Q  299 aatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||| | || |||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  17111676 aatggatcttggaaagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 17111609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 327
Target Start/End: Original strand, 21750152 - 21750276
Alignment:
Q  202 ttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacata-gcggaaacctgatagcaggtgagccaa 300  Q
    ||||||||||| ||||||||||||| | |||||   ||||||||||  |||||||| | ||| |||| |||  ||||||| | ||||||| |||| ||||    
T  21750152 ttttaacacaccccctcacgaccagtattattggatttggttcgtg--gacataaacggtggatgacccatttgcggaaatcagatagcatgtgatccaa 21750249  T
Q  301 tggatcttgaagaggctctgataccat 327  Q
    || || || ||||||||||||||||||    
T  21750250 tgaattttaaagaggctctgataccat 21750276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 25052949 - 25052898
Alignment:
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||||||| ||||||| |||||||| |||| ||||||    
T  25052949 gctctgataccatgttagaaatcgtggttgggcctaacacaaccccacaaaa 25052898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 203 - 343
Target Start/End: Complemental strand, 43743192 - 43743058
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||| ||||||| ||||||| ||||| | ||||||||||  ||||||||||||| ||||| |  |    |||||||||||||||||  | ||||    
T  43743192 tttaacacactccctcacaaccagcattattgggtttggttcgtg--gacataaatgatgagtgac-ctga---taaacctgatagcaggtggtcaaatg 43743099  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggtt 343  Q
    ||||||  |||||||||||||| || ||| ||||| |||||    
T  43743098 gatctttgagaggctctgatactatcttataaatcgtggtt 43743058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 271 - 336
Target Start/End: Complemental strand, 32002463 - 32002399
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaat 336  Q
    ||||||||||||||||||||| ||| ||||| ||||||| ||||| ||||||||||| ||| ||||    
T  32002463 atagcggaaacctgatagcagatga-ccaatagatcttggagaggttctgataccatcttaaaaat 32002399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 354
Target Start/End: Original strand, 52827410 - 52827451
Alignment:
Q  313 aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||||||||||| ||||||||||||||||| ||||||||    
T  52827410 aggctctgataccatcttagaaatcatggttgggcctaacac 52827451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 251 - 367
Target Start/End: Original strand, 53828445 - 53828562
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| |||||||||||||  |||||  |||| | ||| | || ||||||||||||||| ||||||||  ||||||| |||    
T  53828445 acataaatgacgggtggcccgataacggaaacctgataataggtggcccaaagaatcgttaaaaggctctgataccatcttagaaattgtggttgggcct 53828544  T
Q  350 aacacgaccctacaaaat 367  Q
    ||||| |||| |||||||    
T  53828545 aacacaaccccacaaaat 53828562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 49190122 - 49190185
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaa 334  Q
    ||||||||||||| | ||||||||  |||| |||||||| | ||||||||||||||| ||||||    
T  49190122 atagcggaaacctaaaagcaggtggtccaacggatcttggataggctctgataccatcttagaa 49190185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 268
Target Start/End: Complemental strand, 1216035 - 1215984
Alignment:
Q  215 cctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgac 268  Q
    |||||||||||||| |||||||||||||||   |||||||||||| ||||||||    
T  1216035 cctcacgaccagcattattgagcttggttc--ttggacataaatggtgggtgac 1215984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 333
Target Start/End: Original strand, 9908778 - 9908836
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttaga 333  Q
    |||||| |||||||||||||  ||||| ||||||| |||| |||||||||||| |||||    
T  9908778 cggaaatctgatagcaggtggtccaatagatcttggagagactctgataccatcttaga 9908836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 344
Target Start/End: Original strand, 25323899 - 25324049
Alignment:
Q  192 atgtggggctttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagca 290  Q
    |||||||||| |||||||| | |||||| | ||| ||| |||| ||||||| ||||  || ||||||| |||||||  | || | |||||||| | || |    
T  25323899 atgtggggctctttaacaccc-ccctcatgcccaacaccattgggcttggtgcgtg--gatataaatggtgggtgatccgatggtggaaacctaagagta 25323995  T
Q  291 ggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttg 344  Q
    ||||  ||||  ||||||| |||||||||| |||||| ||||||||||||||||    
T  25323996 ggtggcccaacagatcttggagaggctctgctaccatattagaaatcatggttg 25324049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 366
Target Start/End: Original strand, 5398477 - 5398514
Alignment:
Q  329 ttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||||||||||||||||| |||| ||||||    
T  5398477 ttagaaatcatggttggacctaacacaaccccacaaaa 5398514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 321
Target Start/End: Original strand, 25324145 - 25324263
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    |||||||||| |||||||  |||  ||||||| ||||||| |||   || ||||||| |||||| | | ||||||||||| ||||||||||||  |||||    
T  25324145 tttaacacaccccctcacacccaatactattgggcttggtgcgta--gatataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaat 25324242  T
Q  302 ggatctt-gaagaggctctga 321  Q
    ||||||| || ||||||||||    
T  25324243 ggatcttggaggaggctctga 25324263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 400616 - 400652
Alignment:
Q  142 gtgagaatttcccccacttataaacacattgttagac 178  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  400616 gtgaggatttcccccacttataaacacattgtcagac 400652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 6778555 - 6778640
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagca 290  Q
    ||||||||| ||||||||| ||||||||||  | |||||||||   ||||||||||  ||||| | | ||||||||||||||||||||    
T  6778555 ttaacacaccccctcacgatcagcactattaggtttggttcgta--gacataaatggggggtggcccgatagcggaaacctgatagca 6778640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 13611701 - 13611753
Alignment:
Q  284 gatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaat 336  Q
    |||||||||||   |||||||||||||| ||| ||||||||||| ||||||||    
T  13611701 gatagcaggtggttcaatggatcttgaaaaggttctgataccatcttagaaat 13611753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 251 - 330
Target Start/End: Complemental strand, 21498723 - 21498643
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgtt 330  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  ||||   ||| |||||||||||||||||||||||    
T  21498723 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatgtt 21498643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 366
Target Start/End: Original strand, 30565976 - 30566072
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||| ||||| |||||||| |||  |||||||||||| || |||||||| ||||||| | ||||| | ||||||| | |||||| | |||||||||    
T  30565976 atagccgaaacttgatagcaagtggtccaatggatcttagaggaggctctcataccatctaagaaaacgtggttgggcttaacacaaacctacaaaa 30566072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 314 - 366
Target Start/End: Original strand, 35609697 - 35609749
Alignment:
Q  314 ggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||||| |||||||||||||||||  || |||| |||| ||||||    
T  35609697 ggctctgataccatcttagaaatcatggttgggtcttacacaaccccacaaaa 35609749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 230 - 288
Target Start/End: Complemental strand, 42662644 - 42662587
Alignment:
Q  230 tattgagcttggttcgtgtggacataaatgatgggtga-cacatagcggaaacctgatag 288  Q
    ||||||||||||||||||  ||||||||||||| |||| |  ||||||||||||||||||    
T  42662644 tattgagcttggttcgtg--gacataaatgatgagtgatctgatagcggaaacctgatag 42662587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 192 - 366
Target Start/End: Original strand, 13574785 - 13574959
Alignment:
Q  192 atgtggggctttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagca 290  Q
    ||||||| || |||||||||| |||||||||| |||||||||| |||||||||  ||||||||||||| |||||||||| ||||||||||||||||||||    
T  13574785 atgtgggactctttaacacactccctcacgactagcactattgggcttggttc--gtggacataaatggtgggtgacacgatagcggaaacctgatagca 13574882  T
Q  291 ggtgagccaatggatcttga-agaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||  |||||||||||| |  |||||| ||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  13574883 ggtggcccaatggatcttaactgaggctttgataccatattagaaattgtggttgggcctaacacaaccccacaaaa 13574959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 35038306 - 35038466
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatgg 303  Q
    ||||||||| ||||||||||||| ||||||| ||||||||||||  |||||||||| |||||| |  |||||||||||||||| |||||||  |||||||    
T  35038306 ttaacacaccccctcacgaccagtactattgggcttggttcgtg--gacataaatggtgggtggccgatagcggaaacctgattgcaggtggcccaatgg 35038403  T
Q  304 atcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||| |||||| |||||||||| |||||| || ||||||| |||||||| |||| ||||||    
T  35038404 atcttggagaggcactgataccatcttagaagtcgtggttgggcctaacacaaccccacaaaa 35038466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 4155531 - 4155370
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| | ||||||||||||||||||| |||||||||||   |||||||| | |||||| | | ||||||||||||||||||||||||  ||||||    
T  4155531 ttaacacaccctctcacgaccagcactattgggcttggttcgtc--gacataaacggtgggtggcccgatagcggaaacctgatagcaggtggcccaatg 4155434  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
     |||||| |||| |||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  4155433 aatcttggagagactctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 4155370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 20327726 - 20327887
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| | |||||||||| |||||||| ||||||||| ||  |||||||||| |||||| | | ||||||||||||||||||||||||  ||||||    
T  20327726 ttaacacacccgctcacgaccaacactattgggcttggttcctg--gacataaatggtgggtggcccgatagcggaaacctgatagcaggtggcccaatg 20327823  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||| ||  |||||| |||||||||| ||||||||||||||||| |||||||| |||| ||||||    
T  20327824 gattttagagaggcactgataccatattagaaatcatggttgggcctaacacaaccccacaaaa 20327887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 16239799 - 16239649
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||||| ||||||||||||||||||  ||||||||||||| |||||| | | ||| ||||||||||||||||||||  | || |    
T  16239799 ttaacacaccccctcacgaccatcactattgagcttggttc--gtggacataaatggtgggtggctcgataacggaaacctgatagcaggtggccaaacg 16239702  T
Q  303 gatctt-gaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||| || |||||||||||||||| ||||||||| ||||||| ||||||||    
T  16239701 gatcttggaggaggctctgataccatcttagaaatcgtggttgggcctaacac 16239649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 204 - 327
Target Start/End: Complemental strand, 34992813 - 34992691
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||||| |||||||| | | ||||||||||||||||||||||  ||||||    
T  34992813 ttaacacaccccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtgacccgacagcggaaacctgatagcaggtggcccaatg 34992716  T
Q  303 gatcttgaagaggctctgataccat 327  Q
    || |||| |||| ||||||||||||    
T  34992715 gaccttggagagactctgataccat 34992691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 214 - 331
Target Start/End: Original strand, 19954339 - 19954455
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtga-cacatagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    ||||||||||||| ||||||| ||||||||||||  |||||||||| ||||||  || |||||| |||||||||||||| ||  ||||||||||||||||    
T  19954339 ccctcacgaccagtactattgggcttggttcgtg--gacataaatggtgggtggtcagatagcgaaaacctgatagcagatggcccaatggatcttgaag 19954436  T
Q  313 aggctctgataccatgtta 331  Q
    |||||||||||||||||||    
T  19954437 aggctctgataccatgtta 19954455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 219 - 366
Target Start/End: Original strand, 20303277 - 20303423
Alignment:
Q  219 acgaccagcactattgagcttggttcgtgtggacataaatgatgggtg-acacatagcggaaacctgatagcaggtgagccaatggatcttgaagaggct 317  Q
    ||||||| ||||||||  |||||||||||  |||||||||| |||||| ||  |||| |||||||||||||||||||  ||||||||| ||  |||||||    
T  20303277 acgaccaacactattggacttggttcgtg--gacataaatggtgggtggaccgatagtggaaacctgatagcaggtggcccaatggattttagagaggct 20303374  T
Q  318 ctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||| ||||||||  |||||||||||||||| |||| ||||||    
T  20303375 ctgataccatattagaaattgtggttggacctaacacaaccccacaaaa 20303423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 272 - 366
Target Start/End: Complemental strand, 54568032 - 54567938
Alignment:
Q  272 tagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||||||||||||||||   |||||||||||| ||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  54568032 tagcggaaacctgatagcaggtggctcaatggatcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 54567938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 227 - 366
Target Start/End: Original strand, 8142547 - 8142685
Alignment:
Q  227 cactattgagcttggttcgtgtggacataaatgatgggtga-cacatagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgatacc 325  Q
    |||||| ||||||||||||||  |||||||||| ||||||  |  || | ||||| |||||||||| ||| | ||||||| || ||||||||||||||||    
T  8142547 cactatagagcttggttcgtg--gacataaatggtgggtggtctgattgaggaaatctgatagcagatgacctaatggattttaaagaggctctgatacc 8142644  T
Q  326 atgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    || ||||||||| ||||| |||||||||| |||| ||||||    
T  8142645 atcttagaaatcgtggttagacctaacacaaccccacaaaa 8142685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 247 - 354
Target Start/End: Complemental strand, 45828185 - 45828077
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    ||||||||||||| |||||| | | |||||||||||||| |||||||||   |||||||||||| ||||||||||||||||| ||||||||  |||| ||    
T  45828185 gtggacataaatggtgggtggctcgatagcggaaacctggtagcaggtggcgcaatggatcttggagaggctctgataccatcttagaaattgtggtagg 45828086  T
Q  346 acctaacac 354  Q
     ||||||||    
T  45828085 gcctaacac 45828077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 275 - 366
Target Start/End: Complemental strand, 11589922 - 11589831
Alignment:
Q  275 cggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||| ||||||  |||| | ||| |||||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  11589922 cggaaacctgataacaggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 11589831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 305
Target Start/End: Original strand, 20303176 - 20303276
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtg-acacatagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| | ||||||||||||||| |||  |||||||||||  |||||||||| |||||| ||  ||||||||||||||||||||||||| ||||||    
T  20303176 ttaacacacccgctcacgaccagcactgttggacttggttcgtg--gacataaatggtgggtggaccgatagcggaaacctgatagcaggtgacccaatg 20303273  T
Q  303 gat 305  Q
    |||    
T  20303274 gat 20303276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 280 - 366
Target Start/End: Original strand, 16926901 - 16926987
Alignment:
Q  280 acctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||| ||||||| |||||||||||||||||| |||||||||||| ||||||||| ||||||  | |||||| |||| ||||||    
T  16926901 acctgataacaggtgacccaatggatcttgaagagactctgataccatcttagaaatcgtggttgagcttaacacaaccccacaaaa 16926987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 248 - 327
Target Start/End: Original strand, 21809059 - 21809140
Alignment:
Q  248 tggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaatggatcttgaa-gaggctctgataccat 327  Q
    |||||||||||||||||| | |  ||||||||||||||||||||||||| |||||||||||||||  |||||||||||||||    
T  21809059 tggacataaatgatgggtagtccgatagcggaaacctgatagcaggtgacccaatggatcttgaaccaggctctgataccat 21809140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 1722998 - 1723114
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  ||||   ||| |||||||||||||||||||| ||||||||| ||||||| |||    
T  1722998 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaacaatcgtgaagaggctctgataccatcttagaaatcgtggttgggcct 1723097  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  1723098 aacacaaccccacaaaa 1723114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 326
Target Start/End: Complemental strand, 24866208 - 24866129
Alignment:
Q  247 gtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgatacca 326  Q
    ||||||||||||| | |||| |  ||| ||||||||||||||||||||  |||||| |||||||||||||||||||||||    
T  24866208 gtggacataaatggtaggtggccaataacggaaacctgatagcaggtggcccaatgaatcttgaagaggctctgatacca 24866129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 217 - 336
Target Start/End: Complemental strand, 49629800 - 49629681
Alignment:
Q  217 tcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac--atagcggaaacctgatagcaggtgagccaatggatcttgaagag 314  Q
    ||||||||| |||||||| ||||||||  | |||||||||||| ||||   | |  ||||| ||||||||||||||||||  ||||||||||||||||||    
T  49629800 tcacgaccaacactattgggcttggtt--tatggacataaatggtgggatgctccgatagcagaaacctgatagcaggtggtccaatggatcttgaagag 49629703  T
Q  315 gctctgataccatgttagaaat 336  Q
    ||||| ||||||| ||| ||||    
T  49629702 gctctaataccattttaaaaat 49629681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 31317438 - 31317286
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||||| |||||||  ||||||||||||| |||||| | | ||| |  ||||||||||| |||||  |||| |    
T  31317438 ttaacacaccccctcacgaccagcactattgagtttggttc--gtggacataaatggtgggtggcccgataac-aaaacctgatagtaggtggtccaacg 31317342  T
Q  303 gatctt-gaagaggctctgat---accatgttagaaatcatggttggacctaacac 354  Q
    |||||| |||||| |||||||   ||||| ||||||||| ||||||  ||||||||    
T  31317341 gatcttggaagagactctgataccaccatcttagaaatcgtggttgagcctaacac 31317286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 46139446 - 46139347
Alignment:
Q  227 cactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgatacc 325  Q
    |||||||| ||||||||  |||| ||||||||| |||||| | | ||||| ||||||||||||||||||| ||||||||||||| ||||| ||| |||||    
T  46139446 cactattgggcttggtt--tgtgaacataaatggtgggtggcccgatagcagaaacctgatagcaggtgacccaatggatcttggagaggatctaatacc 46139349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 297 - 359
Target Start/End: Complemental strand, 54368631 - 54368569
Alignment:
Q  297 ccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||||||||||||||||||||||||||||| ||||||||| |||||||  ||||||| ||||    
T  54368631 ccaatggatcttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccc 54368569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 367
Target Start/End: Original strand, 17001409 - 17001460
Alignment:
Q  316 ctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    |||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  17001409 ctctgataccattttagaaatcatggttggacctaacactaccccacaaaat 17001460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 271 - 365
Target Start/End: Complemental strand, 35018616 - 35018522
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaa 365  Q
    ||||||||||||| |||||| |||| |||| |||||||| | ||||||||||| ||| |||||| |  ||||||| |||||| ||||| ||||||    
T  35018616 atagcggaaaccttatagcaagtgacccaacggatcttggataggctctgatatcatcttagaatttgtggttgggcctaactcgaccttacaaa 35018522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 354
Target Start/End: Original strand, 50052722 - 50052798
Alignment:
Q  277 gaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||||||||||||||| ||| |||||||||  |||||||||||||| || ||||||||  ||||||| ||||||||    
T  50052722 gaaacctgatagcaggtg-gcccatggatcttagagaggctctgatacaatattagaaatagtggttgggcctaacac 50052798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 323
Target Start/End: Original strand, 52724098 - 52724216
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    |||||||||  | |||||| || |||||| ||| ||||||| ||  |||||||||| |||||| | | |||||| ||||||||||||| |||| ||||||    
T  52724098 ttaacacacctcttcacgatcaacactatcgagtttggttcatg--gacataaatggtgggtggcccgatagcgaaaacctgatagcatgtgacccaatg 52724195  T
Q  303 gatcttgaagaggctctgata 323  Q
     || |||||||||||||||||    
T  52724196 aatgttgaagaggctctgata 52724216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 277 - 366
Target Start/End: Original strand, 12930076 - 12930166
Alignment:
Q  277 gaaacctgatagcaggtgagccaatggatc-ttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||||  |||| ||||| | || |||||| ||||||||| ||||||||  ||||||| |||||||| |||| ||||||    
T  12930076 gaaacctgatagcaggtggcccaacggatcatggaggaggctttgataccatcttagaaatggtggttgggcctaacacaaccccacaaaa 12930166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 355
Target Start/End: Original strand, 29215701 - 29215842
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatgg 303  Q
    ||||||||| |||||||||||| |||||||| | ||||||||||  |||||||||||||        ||||| |||| ||||||  |||||  | ||||     
T  29215701 ttaacacac-ccctcacgaccaacactattgggtttggttcgtg--gacataaatgatgt-------atagcagaaatctgataagaggtggcctaatga 29215790  T
Q  304 atcttgaagaggctctgataccatgttagaaatcatggttggacctaacacg 355  Q
    || ||||||| ||||| ||| ||| ||||||||||||||| |||||||||||    
T  29215791 attttgaagaagctctaatatcatcttagaaatcatggttagacctaacacg 29215842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 315 - 359
Target Start/End: Complemental strand, 21833445 - 21833401
Alignment:
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||    
T  21833445 gctctgataccatgttagaaatcgtggttgggcctaacacaaccc 21833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 271 - 334
Target Start/End: Original strand, 22775577 - 22775641
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaag-aggctctgataccatgttagaa 334  Q
    ||||| ||||||| ||||||||||  ||||| |||||||||| ||||||||||||||| ||||||    
T  22775577 atagcagaaacctaatagcaggtggcccaatagatcttgaaggaggctctgataccatcttagaa 22775641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 281 - 345
Target Start/End: Original strand, 26753474 - 26753538
Alignment:
Q  281 cctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    ||||||||||||||| |||||| |||||||||| |||| ||||  || ||||||||| |||||||    
T  26753474 cctgatagcaggtgatccaatgaatcttgaagatgctcggatattatcttagaaatcgtggttgg 26753538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 39683380 - 39683461
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgat 286  Q
    ||||||||  ||||||||||||||| ||||| |||||||||  ||||||||||||| |||||| | | ||||| ||||||||||    
T  39683380 ttaacacagtccctcacgaccagcattattgggcttggttc--gtggacataaatggtgggtggcccgatagcagaaacctgat 39683461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 243 - 337
Target Start/End: Original strand, 28087129 - 28087224
Alignment:
Q  243 tcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatc 337  Q
    ||||||| ||||||||||  |||| | | ||| ||||||||||||| ||||||  |||| | ||| ||||||||||||| |||||| |||||||||    
T  28087129 tcgtgtgaacataaatgacaggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctctggtaccatcttagaaatc 28087224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 299 - 351
Target Start/End: Complemental strand, 1800139 - 1800086
Alignment:
Q  299 aatggatcttgaag-aggctctgataccatgttagaaatcatggttggacctaa 351  Q
    |||||||||||||| ||||||||||||||| ||||||||  ||||||| |||||    
T  1800139 aatggatcttgaaggaggctctgataccatcttagaaattgtggttgggcctaa 1800086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 21808834 - 21808867
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtg 247  Q
    ||||||||||||||||||||| ||||||||||||    
T  21808834 ccctcacgaccagcactattgggcttggttcgtg 21808867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 330
Target Start/End: Complemental strand, 25417256 - 25417130
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    |||||||||| | |||||||||| || ||||| | ||||||| ||  |||||||||||||||||   | ||| ||| ||| |||||||| |||| |||||    
T  25417256 tttaacacactctctcacgaccatcattattggggttggttcctg--gacataaatgatgggtggtccgataacggtaacttgatagcatgtgacccaat 25417159  T
Q  302 ggatcttgaagaggctctgataccatgtt 330  Q
    | ||||||   | ||||||||||||||||    
T  25417158 gaatcttggtaaagctctgataccatgtt 25417130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 34659180 - 34659236
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccat 327  Q
    |||| |||||| | |||||| |||  |||| ||||||||||||||||||||||||||    
T  34659180 atagtggaaacttaatagcatgtggtccaacggatcttgaagaggctctgataccat 34659236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 206 - 359
Target Start/End: Original strand, 5633 - 5785
Alignment:
Q  206 aacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatgga 304  Q
    ||||||| ||||||||||||||||||||| ||||||||||||  |||||||||| ||||||   | ||||||||||||||||||||||||   |||||||    
T  5633 aacacaccccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggtccgatagcggaaacctgatagcaggtggctcaatgga 5730  T
Q  305 tcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||| ||||||||||||||||| ||||||||| ||||||| |||||||| ||||    
T  5731 tcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccc 5785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 4112883 - 4113044
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||||||||||||||||  |||||||||| ||||||   || |||||||||||||||||  ||||   |||||    
T  4112883 ttaacacaccccctcacgaccagcactattgagcttggttcgtg--gacataaatggtgggtggtccaatagcggaaacctgatagatggtggctcaatg 4112980  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| |||||||| |||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  4112981 gatcttggagaggctccgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 4113044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 204 - 365
Target Start/End: Original strand, 25145597 - 25145757
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||  ||||| |||| ||||||   | ||| |||||||||||||||||||| | ||||     
T  25145597 ttaacacaccccctcacgaccagcactattgagcttgattcgtg--gacattaatggtgggtggtccgataacggaaacctgatagcaggtgggtcaata 25145694  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaa 365  Q
    ||||||| ||||||||||||| ||| ||||||||||||||||| |||||||| |||| |||||    
T  25145695 gatcttggagaggctctgatatcatcttagaaatcatggttgggcctaacacaaccccacaaa 25145757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 35772236 - 35772075
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| | ||||| ||| ||||||||| ||||||||||||  |||||||||| |||||| | | ||||||||||||||||||||| ||  ||||||    
T  35772236 ttaacacacccgctcacaaccggcactattgggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacctgatagcagatggcccaatg 35772139  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||  ||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  35772138 gatcttgagaaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 35772075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 204 - 367
Target Start/End: Complemental strand, 38668332 - 38668170
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| | ||||||||||||| ||||| ||||||||| ||  |||||||||||| |||||| | ||||| ||||||||||| ||||||| ||||||    
T  38668332 ttaacacacccactcacgaccagcaatattgggcttggttcatg--gacataaatgataggtgacccgatagcagaaacctgataacaggtgacccaatg 38668235  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    |||| || ||||||||||||||||| ||||||||  || |||| |||||||| |||| |||||||    
T  38668234 gatcatggagaggctctgataccatcttagaaattgtgattgggcctaacacaaccccacaaaat 38668170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 366
Target Start/End: Original strand, 51460319 - 51460480
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||||  |||||||| ||||| |||||| ||||||||||  |||| ||||| |||||  | | ||||||||||||||||||||||||  ||||||    
T  51460319 ttaacacacatactcacgactagcacaattgagtttggttcgtg--gacacaaatggtgggtcgcccgatagcggaaacctgatagcaggtggcccaatg 51460416  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||| ||| |||||||| |||||||| |||||||| |||| ||||||    
T  51460417 gatcttggagaggctctgatatcattttagaaattatggttgggcctaacacaaccccacaaaa 51460480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 204 - 326
Target Start/End: Complemental strand, 52961554 - 52961433
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||||| |||||||||||||||| |||||||  |||||| || |||||| | | ||||||||||||||||||||||||  ||||||    
T  52961554 ttaacacaccccctcacgactagcactattgagcttgtttcgtgt--acataactggtgggtggcccgatagcggaaacctgatagcaggtggcccaatg 52961457  T
Q  303 gatcttgaagaggctctgatacca 326  Q
    ||||||||||||||||||||||||    
T  52961456 gatcttgaagaggctctgatacca 52961433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 214 - 354
Target Start/End: Original strand, 2859514 - 2859653
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||| |||||| | | ||||| ||||||| |||| |||||  ||||||||||||||||    
T  2859514 ccctcacgaccagcactattgggcttggttcgtg--gacataaatggtgggtggcccgatagcagaaacctaatagaaggtggcccaatggatcttgaag 2859611  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    ||||||| ||||||| |||||||| ||||||||  |||||||    
T  2859612 aggctctaataccatcttagaaatgatggttggggctaacac 2859653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 26177115 - 26176954
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| || ||||||||||||||||||  |||||||||||  || ||||||| ||||||   | |||||||||| |||||||||||||  ||||||    
T  26177115 ttaacacaccccgtcacgaccagcactattggacttggttcgtg--gatataaatggtgggtggtccgatagcggaaatctgatagcaggtggcccaatg 26177018  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||| ||||||||||||| ||| |||||||||  |||||| |||||||| |||| ||||||    
T  26177017 gatcttggagaggctctgatatcatcttagaaatcgcggttgggcctaacacaaccccacaaaa 26176954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 247 - 366
Target Start/End: Complemental strand, 30370001 - 30369881
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    ||||||||||||| |||||| | | |||| |||||||||||||||||||| ||||||||||||| |||||||||||||| || ||||||||| |||||||    
T  30370001 gtggacataaatggtgggtggcccgatagtggaaacctgatagcaggtgacccaatggatcttggagaggctctgatacaatcttagaaatcgtggttgg 30369902  T
Q  346 acctaacacgaccctacaaaa 366  Q
     |||||||| |||| ||||||    
T  30369901 gcctaacacaaccccacaaaa 30369881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 202 - 367
Target Start/End: Complemental strand, 27413556 - 27413392
Alignment:
Q  202 ttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaa 300  Q
    ||||||||||| | |||||||||| |||||||| ||||| ||||||  |||||||||| |||||| | | |||||||||| |||||| ||||||  | ||    
T  27413556 ttttaacacaccctctcacgaccaacactattgggcttgattcgtg--gacataaatggtgggtggcccgatagcggaaatctgataacaggtggtctaa 27413459  T
Q  301 tggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    | ||||||| ||||||||||||| ||| ||||||||| |||||||||||||||| |||  |||||||    
T  27413458 tagatcttggagaggctctgatatcatcttagaaatcgtggttggacctaacacaacctcacaaaat 27413392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 4112652 - 4112783
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||| | |||||||||||| |||||||| |||||||||||   |||||||||| ||||||   | ||||||||||||||||||||||||  ||||||    
T  4112652 ttaacaccccccctcacgaccaacactattgggcttggttcgtt--gacataaatggtgggtggttcgatagcggaaacctgatagcaggtggtccaatg 4112749  T
Q  303 gatcttgaagaggctctgataccatgttagaaat 336  Q
    ||||||| ||||||||||||||||| ||||||||    
T  4112750 gatcttggagaggctctgataccatcttagaaat 4112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 336
Target Start/End: Complemental strand, 369839 - 369706
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac--atagcggaaacctgatagcaggtgagccaat 301  Q
    ||||||||  ||||||||||||||||||||| |||||||||  ||||||||||||| |||||||| |  ||||||||||||||||||||| ||| |||||    
T  369839 ttaacacatcccctcacgaccagcactattgggcttggttc--gtggacataaatggtgggtgaccccgatagcggaaacctgatagcagctgatccaat 369742  T
Q  302 ggatctt-gaagaggctctgataccatgttagaaat 336  Q
    ||||||| ||  |||||||||||||||  |||||||    
T  369741 ggatcttagagtaggctctgataccatcctagaaat 369706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 354
Target Start/End: Complemental strand, 38733354 - 38733209
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatgg 303  Q
    |||||||||  | |||||||||||||||||| |||| ||||||   || ||||||| ||||||    ||||||||||||||||||||||||  |||||||    
T  38733354 ttaacacacctcttcacgaccagcactattgggcttagttcgta--gatataaatggtgggtgg---atagcggaaacctgatagcaggtggtccaatgg 38733260  T
Q  304 atcttgaagaggctctgataccatgttagaaatcatggttggacctaacac 354  Q
    |||||| |||| |||||||||||| ||||||||| |||||| |||||||||    
T  38733259 atcttggagagactctgataccatcttagaaatcgtggttgaacctaacac 38733209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 214 - 359
Target Start/End: Original strand, 4098290 - 4098434
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    |||||||||||| || ||||| ||||||||||||  |||||||| | |||||| | | ||||| |||||||||| |||||||  ||||||||||||||||    
T  4098290 ccctcacgaccaacattattgggcttggttcgtg--gacataaagggtgggtggcccgatagcagaaacctgattgcaggtggcccaatggatcttgaag 4098387  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    || |||||||||||  ||||||||| ||||||| |||||||| ||||    
T  4098388 agtctctgataccaacttagaaatcgtggttgggcctaacacaaccc 4098434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 214 - 366
Target Start/End: Original strand, 26173343 - 26173494
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag 312  Q
    |||||||||||||||| ||||||||| |||||||  |||||||||| |||| |   | ||||||||||||||||||||||||  || |||||| | ||||    
T  26173343 ccctcacgaccagcacaattgagcttagttcgtg--gacataaatggtggggggtccgatagcggaaacctgatagcaggtggtccgatggatatcgaag 26173440  T
Q  313 aggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||| ||| |||||||   |||||||||||||||| |||| ||||||    
T  26173441 aggctctgatatcattttagaaagggtggttggacctaacacaaccccacaaaa 26173494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 208 - 366
Target Start/End: Original strand, 39348233 - 39348390
Alignment:
Q  208 cacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaatggatc 306  Q
    ||||| || |||||||||||||||||| |||||||||  ||||||||||||| ||||| | |  |||| |||||||||||||||||||  |||||||| |    
T  39348233 cacaccccgtcacgaccagcactattgggcttggttc--gtggacataaatggtgggtggtccgatagtggaaacctgatagcaggtggcccaatggacc 39348330  T
Q  307 tt-gaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    || || |||||||||||||||| ||||||||| | ||||| |||||||| |||| ||||||    
T  39348331 ttggaggaggctctgataccatcttagaaatcgt-gttgggcctaacacaaccccacaaaa 39348390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 336
Target Start/End: Complemental strand, 17412541 - 17412408
Alignment:
Q  202 ttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaa 300  Q
    ||||||||||| || ||||||||| |||||||| ||||| ||||||  ||||||||||||||||| | | ||| || ||| ||||||||| |||| | ||    
T  17412541 ttttaacacaccccatcacgaccaacactattgggcttgattcgtg--gacataaatgatgggtggctcgataacgaaaatctgatagcaagtgatctaa 17412444  T
Q  301 tggatcttgaagaggctctgataccatgttagaaat 336  Q
    ||||||||||||||||||| |||||||||| |||||    
T  17412443 tggatcttgaagaggctctaataccatgttggaaat 17412408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 204 - 322
Target Start/End: Complemental strand, 25713365 - 25713248
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||| | |||||||||||| |||||||| ||||||||||||  |||||||||| |||||| | | ||||||||||| ||||||||||||  ||||||    
T  25713365 ttaacaccccccctcacgaccaacactattgggcttggttcgtg--gacataaatggtgggtggcccgatagcggaaacttgatagcaggtggcccaatg 25713268  T
Q  303 gatcttgaagaggctctgat 322  Q
    ||||||| ||||||||||||    
T  25713267 gatcttggagaggctctgat 25713248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 366
Target Start/End: Complemental strand, 33156918 - 33156779
Alignment:
Q  227 cactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaag-aggctctgatac 324  Q
    |||||||| ||||| ||||||  |||||||||| ||| || | | ||||||||||||||||||||||||| |||| |||||||| || ||||||| ||||    
T  33156918 cactattgggcttgattcgtg--gacataaatggtggatggcccgatagcggaaacctgatagcaggtgaaccaacggatcttggagtaggctctaatac 33156821  T
Q  325 catgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||| ||||||||| ||||||| |||||||| |||| ||||||    
T  33156820 catcttagaaatcgtggttgggcctaacacaaccccacaaaa 33156779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 204 - 367
Target Start/End: Complemental strand, 16163139 - 16162978
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||||||||||||||||||||||| | |||||| |||||  |||||||||| | |||| | | ||||||||||||||||||||||||  ||| ||    
T  16163139 ttaacacacaccctcacgaccagcactatgg-gcttggctcgtg--gacataaatggtaggtggcccgatagcggaaacctgatagcaggtggcccattg 16163043  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    ||||||| ||||||| ||||| ||| ||| ||||  ||||||   ||||||| |||| |||||||    
T  16163042 gatcttggagaggctttgatatcatcttaaaaattgtggttgagtctaacacaaccccacaaaat 16162978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 271 - 353
Target Start/End: Original strand, 32783224 - 32783306
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    ||||| ||||||||||||||||||   ||||||||||||||||| |||||||||||| ||||||||| |||||||| ||||||    
T  32783224 atagcagaaacctgatagcaggtggtacaatggatcttgaagagactctgataccatcttagaaatcgtggttggatctaaca 32783306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 353
Target Start/End: Complemental strand, 7307928 - 7307780
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tagcggaaacctgatagcaggtgagccaatg 302  Q
    |||| |||| |||||||||||| ||||||||   ||||||||||  |||||||||| ||||||   || ||||||||||||||||||||  || ||||||    
T  7307928 ttaatacaccccctcacgaccaacactattggatttggttcgtg--gacataaatggtgggtggtccaatagcggaaacctgatagcagacgacccaatg 7307831  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaaca 353  Q
    |||||||||| | || ||||| ||| |||||||| |||||| | |||||||    
T  7307830 gatcttgaagtgactatgatatcatcttagaaattatggttaggcctaaca 7307780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 365
Target Start/End: Complemental strand, 35892324 - 35892103
Alignment:
Q  142 gtgagaatttcccccacttataaacacattgttagactgtatttttgctaatgtggggctttttaacacacaccctcacgaccagcactattgagcttgg 241  Q
    ||||| ||| |||||||||||||| ||||||| ||||  | || |  || ||||||| || || ||||||| | |||||||||||||| |||| ||||      
T  35892324 gtgagtattgcccccacttataaatacattgtcagaccatcttatatctgatgtgggactctt-aacacaccctctcacgaccagcacaattgggcttaa 35892226  T
Q  242 ttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatg 340  Q
    ||||||  |||||||||| |||||| | | ||||| ||||  |||||||| |||  |||||| ||||||||||| |||||||||| | ||||||||| ||    
T  35892225 ttcgtg--gacataaatggtgggtgccccgatagcagaaatatgatagcaagtggcccaatgaatcttgaagagactctgataccttcttagaaatcgtg 35892128  T
Q  341 gttggacctaacacgaccctacaaa 365  Q
    | ||| | |||||| |||| |||||    
T  35892127 gatgggcttaacacaaccccacaaa 35892103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 352
Target Start/End: Original strand, 12376549 - 12376697
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggt-gacacatagcggaaacctgatagcaggtgagccaat 301  Q
    ||||||||||||||||||||||| |||||||| |||||||||  ||||||||||||| | ||| | |  ||||| | ||||||||||||||||  |||||    
T  12376549 tttaacacacaccctcacgaccaacactattgggcttggttc--gtggacataaatggtaggtggcctgatagcag-aacctgatagcaggtggcccaat 12376645  T
Q  302 ggatcttga-agaggctctgataccatgttagaaatcatggttggacctaac 352  Q
    ||||||| |  || ||||| ||||||  ||||||||| | ||||||||||||    
T  12376646 ggatcttaacggatgctctaataccaacttagaaatcgtcgttggacctaac 12376697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 283 - 366
Target Start/End: Original strand, 8870865 - 8870948
Alignment:
Q  283 tgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||  ||||||||| ||| |||| |||||||||||| ||||||||  |||||||||||||||| |||| ||||||    
T  8870865 tgatagcaggtggcccaatggatattggagagactctgataccatcttagaaatggtggttggacctaacacaaccccacaaaa 8870948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 204 - 337
Target Start/End: Original strand, 31496248 - 31496380
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| || ||||||||||||||| |||||||| || |||   ||||||||| ||||||   | ||||||| ||||||||||||||||  ||||||    
T  31496248 ttaacacaccccttcacgaccagcactactgagcttgattagtgc--acataaatggtgggtggtccgatagcgggaacctgatagcaggtggtccaatg 31496345  T
Q  303 gatcttgaagaggctctgataccatgttagaaatc 337  Q
    |||||| ||||| |||| |||| || |||||||||    
T  31496346 gatcttaaagagactctaatactatcttagaaatc 31496380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 40524818 - 40524876
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgt 329  Q
    |||||| |||| ||||||||| ||| |||||||||||||||||||||||||||||||||    
T  40524818 atagcgaaaacttgatagcagatgaaccaatggatcttgaagaggctctgataccatgt 40524876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 251 - 367
Target Start/End: Complemental strand, 51589968 - 51589851
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||| |||  |||||  |||| | ||| |||||||||||||||||||| ||||||||| ||||||| |||    
T  51589968 acataaatgacgggtggcccgataacggaaacctaataataggtggcccaaagaatcgtgaagaggctctgataccatattagaaatcgtggttgggcct 51589869  T
Q  350 aacacgaccctacaaaat 367  Q
    ||||| |||| |||||||    
T  51589868 aacacaaccccacaaaat 51589851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 34264598 - 34264683
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagca 290  Q
    ||||||||| ||||||||||||||||||||| |||||||||  || || ||||||| ||| |||| | ||||||||||||||||||||    
T  34264598 ttaacacaccccctcacgaccagcactattgtgcttggttc--gtcgatataaatggtggttgacccgatagcggaaacctgatagca 34264683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 51589154 - 51589038
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  |||| | ||| |||||||||| ||||||||| ||||||||  ||||||| |||    
T  51589154 acataaatgacgggtggcccgataacggaaacctgataacaggtggcccaaagaatcgtgaagaggctttgataccatattagaaatggtggttgggcct 51589055  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  51589054 aacacaaccccacaaaa 51589038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 247 - 344
Target Start/End: Original strand, 9146781 - 9146880
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaaga-ggctctgataccatgttagaaatcatggttg 344  Q
    ||||||||||||| |||||||| | ||||||| ||||| || |||| ||  ||||||||||||| ||| |||||||||||||| |||||||| |||||||    
T  9146781 gtggacataaatggtgggtgacccgatagcggtaaccttattgcagttggtccaatggatcttggagaaggctctgataccatcttagaaattatggttg 9146880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 281 - 359
Target Start/End: Original strand, 51460003 - 51460081
Alignment:
Q  281 cctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccc 359  Q
    ||||||||||||||  ||||||||||||| |||||| || ||||||| ||||||||  ||||||| |||||||| ||||    
T  51460003 cctgatagcaggtggcccaatggatcttggagaggcgctaataccatcttagaaattgtggttgggcctaacacaaccc 51460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 259
Target Start/End: Original strand, 12325408 - 12325462
Alignment:
Q  203 tttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatg 259  Q
    ||||||||||||||||||||||| |||||||| |||||||||  |||||||||||||    
T  12325408 tttaacacacaccctcacgaccaacactattgggcttggttc--gtggacataaatg 12325462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 271 - 335
Target Start/End: Original strand, 32783155 - 32783219
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaa 335  Q
    ||||| ||||||||||||||||||   ||||| |||||||||||||||| ||||||| |||||||    
T  32783155 atagcagaaacctgatagcaggtgctacaatgaatcttgaagaggctcttataccatcttagaaa 32783219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 297 - 362
Target Start/End: Complemental strand, 17402697 - 17402632
Alignment:
Q  297 ccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctac 362  Q
    ||||||||||||| ||| ||||||||||||| ||| ||||| |||| || |||||||| |||||||    
T  17402697 ccaatggatcttggagatgctctgataccatcttaaaaatcgtggtcgggcctaacacaaccctac 17402632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 366
Target Start/End: Complemental strand, 3169928 - 3169812
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||||| ||||| | | ||| ||||||||||||| ||||||  | || | ||| |||||   |||||||||||| ||||||||| ||||||| |||    
T  3169928 acataaatgacgggtggcccgataacggaaacctgataacaggtggcctaaagaatcgtgaaggaactctgataccatattagaaatcgtggttgggcct 3169829  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  3169828 aacacaaccccacaaaa 3169812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 26173499 - 26173543
Alignment:
Q  134 cttacaacgtgagaatttcccccacttataaacacattgttagac 178  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||||    
T  26173499 cttacaaggtgagaattgcccccacttataaacacattgtcagac 26173543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 8870801 - 8870861
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtg 266  Q
    ||||||||| |||||||||||||||| |||| | |||||||  ||||||||||||| ||||||    
T  8870801 ttaacacaccccctcacgaccagcacaattgggtttggttc--gtggacataaatggtgggtg 8870861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 297 - 344
Target Start/End: Original strand, 12489164 - 12489211
Alignment:
Q  297 ccaatggatcttgaagaggctctgataccatgttagaaatcatggttg 344  Q
    |||||| |||||||||| ||||||||||||| ||| ||||||||||||    
T  12489164 ccaatgaatcttgaagatgctctgataccatcttaaaaatcatggttg 12489211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 207 - 312
Target Start/End: Complemental strand, 17208758 - 17208654
Alignment:
Q  207 acacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggat 305  Q
    |||||| |||||||| ||| |||||||| |||||||  | ||||| ||||||| |||||| | | ||||||||||||||||||||| ||   ||| ||||    
T  17208758 acacaccccctcacgcccaacactattgggcttggt--gggtggatataaatggtgggtggcccgatagcggaaacctgatagcagatggctcaagggat 17208661  T
Q  306 cttgaag 312  Q
    |||||||    
T  17208660 cttgaag 17208654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 366
Target Start/End: Complemental strand, 29266050 - 29265999
Alignment:
Q  315 gctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  29266050 gctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 29265999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 51459817 - 51459859
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgt 246  Q
    ||||||||| |||||||||||||||| |||| |||||||||||    
T  51459817 ttaacacaccccctcacgaccagcacaattgggcttggttcgt 51459859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 247
Target Start/End: Original strand, 9146676 - 9146709
Alignment:
Q  214 ccctcacgaccagcactattgagcttggttcgtg 247  Q
    |||||||||| |||||||||||||||||||||||    
T  9146676 ccctcacgactagcactattgagcttggttcgtg 9146709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 369
Target Start/End: Complemental strand, 2120172 - 2120120
Alignment:
Q  317 tctgataccatgttagaaatcatggttggacctaacacgaccctacaaaatga 369  Q
    ||||||| ||| ||||||||| || ||||||||||||| |||| |||||||||    
T  2120172 tctgatatcatcttagaaatcgtgattggacctaacacaaccccacaaaatga 2120120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 7653448 - 7653404
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgt 248  Q
    ||||||||| |||||||||||| |||||||| | |||||||||||    
T  7653448 ttaacacactccctcacgaccaacactattgcgtttggttcgtgt 7653404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 279 - 366
Target Start/End: Original strand, 12325510 - 12325598
Alignment:
Q  279 aacctgatagcaggtgagccaatggatcttga-agaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    ||||||||||||||||  |||||||||||| |  || ||||| |||||||||||||||   | |||||||||||| | |||| ||||||    
T  12325510 aacctgatagcaggtggcccaatggatcttaacggatgctctaataccatgttagaaactgtcgttggacctaactcaaccccacaaaa 12325598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 278 - 342
Target Start/End: Original strand, 26346919 - 26346983
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggt 342  Q
    |||||| ||||||||||  |||| |||| |||| |||||||||||| ||| ||||||||| ||||    
T  26346919 aaacctaatagcaggtggtccaacggattttgaggaggctctgatatcatcttagaaatcgtggt 26346983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 82048 - 81888
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacacatagcggaaacctgatagcaggtgagccaatgg 303  Q
    ||||||||| ||||||||||||||||||||| ||||||||| ||  |||||||||| || ||| | |   | |||||||||||| |||||   |||||||    
T  82048 ttaacacaccccctcacgaccagcactattgggcttggttcatg--gacataaatggtgcgtggctcgatgtggaaacctgataacaggtagtccaatgg 81951  T
Q  304 atcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||| ||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  81950 atcttggagaggctctgataccatcttagaaatcgtggttgggcctaacacaaccccacaaaa 81888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 366
Target Start/End: Complemental strand, 5862 - 5701
Alignment:
Q  204 ttaacacacaccctcacgaccagcactatt-gagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaat 301  Q
    ||||||||| ||||||||||||||| |||| | |||||||||||| |  |||||| | |||||||  | ||| ||||||||||||||||||||  |||||    
T  5862 ttaacacac-ccctcacgaccagcattatttgggcttggttcgtggg--cataaacggtgggtgattcgataacggaaacctgatagcaggtggcccaat 5766  T
Q  302 ggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||| ||||||||||||||||||||| ||||||||| |||||||  ||||||| |||| ||||||    
T  5765 ggattttgaagaggctctgataccatcttagaaatcgtggttgggtctaacacaaccccacaaaa 5701  T

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Target: scaffold0400 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 366
Target Start/End: Complemental strand, 4011 - 3891
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    ||||||| |||||||||||| | | ||||||||||||||||||||||||  ||| ||||||||| ||||| ||||||||||| ||||||||  ||||||     
T  4011 gtggacacaaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgt 3912  T
Q  346 acctaacacgaccctacaaaa 366  Q
     |||||||| |||| ||||||    
T  3911 gcctaacacaaccccacaaaa 3891  T

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Target: scaffold0365 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 247 - 366
Target Start/End: Complemental strand, 4655 - 4535
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    ||||||| |||||||||||| | | ||||||||||||||||||||||||  ||| ||||||||| ||||| ||||||||||| ||||||||  ||||||     
T  4655 gtggacacaaatgatgggtggcccgatagcggaaacctgatagcaggtggcccagtggatcttggagaggatctgataccatattagaaattgtggttgt 4556  T
Q  346 acctaacacgaccctacaaaa 366  Q
     |||||||| |||| ||||||    
T  4555 gcctaacacaaccccacaaaa 4535  T

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Target: scaffold0129 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 247 - 366
Target Start/End: Complemental strand, 14469 - 14349
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttgg 345  Q
    ||||||||||||| | |||| | | ||||||||||||||||| ||  ||  ||||||||||||| ||||||||||||||||| ||||||| | |||||||    
T  14469 gtggacataaatggtaggtggcccgatagcggaaacctgataacatatggcccaatggatcttggagaggctctgataccatcttagaaaacgtggttgg 14370  T
Q  346 acctaacacgaccctacaaaa 366  Q
     |||||||| |||| ||||||    
T  14369 gcctaacacaaccccacaaaa 14349  T

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Target: scaffold0083 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 327
Target Start/End: Complemental strand, 51482 - 51358
Alignment:
Q  202 ttttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaa 300  Q
    ||||||||||  ||||||| |||| |||||||| ||||||||||||   ||||||||||| |||| | | ||||  |||||||||||||||| || ||||    
T  51482 ttttaacacatcccctcacaaccaacactattgggcttggttcgtga--acataaatgataggtggcccgatagtagaaacctgatagcaggagacccaa 51385  T
Q  301 tggatcttgaagaggctctgataccat 327  Q
    ||||||||| ||| |||||||||||||    
T  51384 tggatcttggagaagctctgataccat 51358  T

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Target: scaffold0459 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 13305 - 13178
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tag-cggaaacctgatagcaggtgagccaat 301  Q
    ||||||||| || ||||||||| |||||||| ||||||||| ||  |||||||||  |||||||| || ||| ||||||||||||||||||||  |||||    
T  13305 ttaacacaccccatcacgaccaacactattgggcttggttcatg--gacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaat 13208  T
Q  302 ggatcttgaagaggctc-tgataccatgtt 330  Q
    |||||||| |||| ||| ||||||||||||    
T  13207 ggatcttggagagactcttgataccatgtt 13178  T

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Target: scaffold0366 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 10946 - 10819
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacaca-tag-cggaaacctgatagcaggtgagccaat 301  Q
    ||||||||| || ||||||||| |||||||| ||||||||| ||  |||||||||  |||||||| || ||| ||||||||||||||||||||  |||||    
T  10946 ttaacacaccccatcacgaccaacactattgggcttggttcatg--gacataaatagtgggtgacccaataggcggaaacctgatagcaggtggtccaat 10849  T
Q  302 ggatcttgaagaggctc-tgataccatgtt 330  Q
    |||||||| |||| ||| ||||||||||||    
T  10848 ggatcttggagagactcttgataccatgtt 10819  T

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Target: scaffold0366; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 330
Target Start/End: Complemental strand, 14612 - 14485
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atag-cggaaacctgatagcaggtgagccaat 301  Q
    ||||||||| || ||||||||| |||||||| ||||||||| ||  |||||||||  |||||||| | |||| ||||||||||||||||||||  |||||    
T  14612 ttaacacaccccatcacgaccaacactattgggcttggttcatg--gacataaatagtgggtgacccgataggcggaaacctgatagcaggtggtccaat 14515  T
Q  302 ggatcttgaagaggctc-tgataccatgtt 330  Q
    |||||||| |||| ||| ||||||||||||    
T  14514 ggatcttggagagactcttgataccatgtt 14485  T

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Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 271 - 367
Target Start/End: Original strand, 41149 - 41245
Alignment:
Q  271 atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
    |||||| |||| ||||||||||||  |||||| |||||| ||||||||||||||||| ||||||||| | ||||  ||||| || |||| |||||||    
T  41149 atagcgcaaacttgatagcaggtggcccaatgaatcttggagaggctctgataccatcttagaaatcgtagttgagcctaatacaaccccacaaaat 41245  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 278 - 366
Target Start/End: Complemental strand, 56593 - 56505
Alignment:
Q  278 aaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaa 366  Q
    |||||||||| ||||||  |||| | ||  |||||||||||||||||||| ||||||||| ||||||| |||||||| |||| ||||||    
T  56593 aaacctgataacaggtggcccaaagaattgtgaagaggctctgataccatattagaaatcgtggttgggcctaacacaaccccacaaaa 56505  T

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Target: scaffold0047 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 367
Target Start/End: Complemental strand, 12853 - 12692
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtg-acacatagcggaaacctgatagcaggtgagccaatg 302  Q
    ||||||||| |||||||| ||||||||||||||||||||||  ||| ||||||||| ||||||  |  |||||| || |||||||| |||||  |||||     
T  12853 ttaacacaccccctcacg-ccagcactattgagcttggttc--gtgaacataaatggtgggtgttccgatagcgaaatcctgatagtaggtggcccaatt 12757  T
Q  303 gatcttgaagaggctctgataccatgttagaaatcatggttggacctaacacgaccctacaaaat 367  Q
     |||||| |||| | || ||||||| ||| ||||  ||||||| |||||||| |||  |||||||    
T  12756 tatcttggagagacgctaataccatcttaaaaattgtggttgggcctaacacaaccacacaaaat 12692  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 87701 - 87775
Alignment:
Q  219 acgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtg 294  Q
    ||||||||||||||||||| || |  ||||||| ||||||| |||||||| | |||| |||||||||||||||||||    
T  87701 acgaccagcactattgagcatgat--gtgtggatataaatggtgggtgacccgatagtggaaacctgatagcaggtg 87775  T

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Target: scaffold0481 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 366
Target Start/End: Original strand, 3394 - 3509
Alignment:
Q  251 acataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaagaggctctgataccatgttagaaatcatggttggacct 349  Q
    |||||||| ||||||||| | ||| ||||||||| ||| ||||||| |||| | ||  |||| ||||||||||||||| ||||||||| || ||||  ||    
T  3394 acataaat-atgggtgactcgataacggaaacctaataacaggtgacccaaagaattatgaaaaggctctgataccatattagaaatcgtgattgggtct 3492  T
Q  350 aacacgaccctacaaaa 366  Q
    ||||| |||| ||||||    
T  3493 aacacaaccccacaaaa 3509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 5795 - 5728
Alignment:
Q  247 gtggacataaatgatgggtgacac-atagcggaaacctgatagcaggtgagccaatggatcttgaaga 313  Q
    ||||||||||||||| |||| | | |||||| ||| |||||||||||||| ||||| |||||||||||    
T  5795 gtggacataaatgataggtggctcgatagcgaaaatctgatagcaggtgacccaatagatcttgaaga 5728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 204 - 266
Target Start/End: Complemental strand, 67457 - 67397
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtg 266  Q
    |||||||||||| ||||  ||| ||||||||||||||||||  ||||||||||||| ||||||    
T  67457 ttaacacacaccgtcacagccaacactattgagcttggttc--gtggacataaatggtgggtg 67397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0729 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 204 - 290
Target Start/End: Complemental strand, 2701 - 2616
Alignment:
Q  204 ttaacacacaccctcacgaccagcactattgagcttggttcgtgtggacataaatgatgggtgacac-atagcggaaacctgatagca 290  Q
    ||||||||| ||||||||| ||||||||||  | |||||||||   ||||||||||  ||||| | | ||||||||||||||||||||    
T  2701 ttaacacaccccctcacgatcagcactattaggtttggttcgta--gacataaatggggggtggcccgatagcggaaacctgatagca 2616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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