View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11151_low_8 (Length: 291)

Name: NF11151_low_8
Description: NF11151
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11151_low_8
NF11151_low_8
[»] chr7 (44 HSPs)
chr7 (4-280)||(47559565-47559847)
chr7 (48-179)||(27378836-27378965)
chr7 (50-110)||(44821959-44822019)
chr7 (145-224)||(22388008-22388087)
chr7 (51-144)||(20526414-20526505)
chr7 (48-104)||(7244686-7244742)
chr7 (92-201)||(9527142-9527250)
chr7 (92-185)||(47004013-47004105)
chr7 (145-195)||(3610844-3610894)
chr7 (68-110)||(40252135-40252177)
chr7 (137-185)||(6552365-6552414)
chr7 (47-111)||(19022592-19022656)
chr7 (45-179)||(28165023-28165156)
chr7 (43-114)||(2825234-2825305)
chr7 (47-144)||(5947153-5947247)
chr7 (32-111)||(9038111-9038189)
chr7 (68-111)||(12110359-12110402)
chr7 (153-232)||(27508074-27508153)
chr7 (45-124)||(33678766-33678845)
chr7 (47-160)||(40688993-40689105)
chr7 (47-110)||(43648240-43648303)
chr7 (68-111)||(46280300-46280343)
chr7 (147-181)||(1350348-1350382)
chr7 (139-185)||(45078219-45078265)
chr7 (32-101)||(22551397-22551466)
chr7 (92-183)||(25827320-25827410)
chr7 (58-111)||(37064482-37064535)
chr7 (44-125)||(38010699-38010780)
chr7 (44-125)||(39907788-39907869)
chr7 (147-195)||(40438986-40439037)
chr7 (70-111)||(46104332-46104373)
chr7 (133-185)||(46213729-46213782)
chr7 (68-125)||(47177621-47177678)
chr7 (58-111)||(49019867-49019920)
chr7 (94-185)||(49060466-49060556)
chr7 (46-106)||(529379-529439)
chr7 (145-185)||(991178-991218)
chr7 (134-185)||(991996-992048)
chr7 (128-195)||(3279638-3279706)
chr7 (68-108)||(15309593-15309633)
chr7 (51-111)||(25596032-25596092)
chr7 (58-110)||(34744028-34744080)
chr7 (47-111)||(39279762-39279826)
chr7 (32-96)||(43250691-43250755)
[»] chr8 (47 HSPs)
chr8 (40-185)||(28769339-28769483)
chr8 (44-122)||(30389087-30389165)
chr8 (128-225)||(34563136-34563234)
chr8 (45-110)||(9956819-9956884)
chr8 (45-144)||(33714241-33714337)
chr8 (129-185)||(40280292-40280349)
chr8 (47-111)||(27028830-27028894)
chr8 (82-204)||(35869744-35869865)
chr8 (44-185)||(40728421-40728562)
chr8 (93-166)||(26820144-26820216)
chr8 (92-181)||(42597331-42597419)
chr8 (32-110)||(11569449-11569527)
chr8 (69-181)||(14905125-14905236)
chr8 (45-110)||(1930035-1930100)
chr8 (58-103)||(35534631-35534676)
chr8 (44-101)||(42215086-42215143)
chr8 (32-125)||(42764252-42764345)
chr8 (68-108)||(38874648-38874688)
chr8 (56-111)||(10114488-10114543)
chr8 (34-125)||(12361177-12361268)
chr8 (50-113)||(27754401-27754464)
chr8 (133-231)||(29699134-29699233)
chr8 (32-103)||(30259121-30259192)
chr8 (49-166)||(31862438-31862554)
chr8 (44-185)||(41620295-41620435)
chr8 (73-185)||(2107362-2107470)
chr8 (125-166)||(2699251-2699293)
chr8 (44-110)||(5069697-5069763)
chr8 (56-114)||(14247240-14247298)
chr8 (47-101)||(30918122-30918176)
chr8 (131-180)||(32506988-32507038)
chr8 (144-182)||(42476034-42476072)
chr8 (45-111)||(43504750-43504816)
chr8 (48-110)||(43717945-43718007)
chr8 (45-110)||(1113058-1113123)
chr8 (41-144)||(2482833-2482932)
chr8 (135-183)||(11188248-11188297)
chr8 (133-185)||(14482128-14482181)
chr8 (35-104)||(20672756-20672825)
chr8 (144-185)||(26813908-26813949)
chr8 (69-110)||(29168921-29168962)
chr8 (51-104)||(44236834-44236887)
chr8 (44-103)||(4281552-4281612)
chr8 (45-125)||(7514563-7514643)
chr8 (125-180)||(26215427-26215483)
chr8 (44-182)||(39866738-39866878)
chr8 (147-223)||(43208239-43208315)
[»] chr4 (53 HSPs)
chr4 (43-224)||(17883954-17884135)
chr4 (44-125)||(7694014-7694095)
chr4 (52-125)||(18628555-18628628)
chr4 (168-233)||(19304806-19304871)
chr4 (58-111)||(20031748-20031801)
chr4 (129-185)||(30024626-30024683)
chr4 (44-125)||(42685409-42685490)
chr4 (56-125)||(50004160-50004229)
chr4 (82-204)||(24443945-24444066)
chr4 (42-110)||(53673660-53673728)
chr4 (49-166)||(33534178-33534294)
chr4 (47-110)||(52315204-52315267)
chr4 (56-102)||(825506-825552)
chr4 (32-185)||(23819016-23819167)
chr4 (49-185)||(49219065-49219200)
chr4 (56-171)||(3155543-3155657)
chr4 (32-109)||(29263371-29263448)
chr4 (51-190)||(30207582-30207719)
chr4 (47-111)||(17822872-17822936)
chr4 (125-224)||(24193472-24193572)
chr4 (68-195)||(44319866-44319991)
chr4 (42-110)||(47800623-47800691)
chr4 (125-184)||(47970245-47970305)
chr4 (40-194)||(54325037-54325190)
chr4 (47-103)||(55414427-55414483)
chr4 (44-103)||(8468955-8469014)
chr4 (68-111)||(16200009-16200052)
chr4 (120-182)||(28623218-28623281)
chr4 (44-111)||(43932434-43932501)
chr4 (153-204)||(46860276-46860327)
chr4 (133-224)||(54986309-54986400)
chr4 (116-181)||(4663770-4663836)
chr4 (128-185)||(19422344-19422402)
chr4 (44-224)||(24929380-24929559)
chr4 (32-114)||(30066758-30066840)
chr4 (49-111)||(34398694-34398756)
chr4 (44-110)||(43824283-43824349)
chr4 (45-111)||(49202644-49202710)
chr4 (155-224)||(50298417-50298487)
chr4 (58-112)||(55302247-55302301)
chr4 (144-185)||(2980574-2980615)
chr4 (44-101)||(8469381-8469438)
chr4 (69-110)||(25548558-25548599)
chr4 (133-181)||(27671923-27671972)
chr4 (49-110)||(27721717-27721778)
chr4 (44-109)||(52746844-52746909)
chr4 (68-108)||(942136-942176)
chr4 (145-185)||(4191665-4191705)
chr4 (58-110)||(20109009-20109061)
chr4 (92-194)||(24160547-24160648)
chr4 (145-185)||(27616412-27616452)
chr4 (125-220)||(36734784-36734880)
chr4 (129-184)||(41088311-41088367)
[»] chr5 (58 HSPs)
chr5 (47-181)||(33234292-33234424)
chr5 (49-185)||(31694444-31694579)
chr5 (45-180)||(9202753-9202887)
chr5 (50-186)||(18704046-18704180)
chr5 (45-109)||(4014429-4014493)
chr5 (32-126)||(13604841-13604935)
chr5 (32-110)||(41957443-41957521)
chr5 (49-110)||(7319017-7319078)
chr5 (50-111)||(12425570-12425631)
chr5 (44-124)||(37588364-37588444)
chr5 (169-224)||(912995-913050)
chr5 (40-111)||(15402829-15402900)
chr5 (154-221)||(27104527-27104594)
chr5 (93-195)||(32059642-32059742)
chr5 (47-126)||(41981872-41981951)
chr5 (44-110)||(11707055-11707121)
chr5 (32-126)||(21768189-21768283)
chr5 (135-224)||(26516185-26516275)
chr5 (44-114)||(28413288-28413358)
chr5 (69-111)||(32942617-32942659)
chr5 (45-111)||(39105463-39105529)
chr5 (55-179)||(1550830-1550952)
chr5 (32-109)||(3977309-3977386)
chr5 (45-110)||(14182386-14182450)
chr5 (34-142)||(17258877-17258983)
chr5 (45-110)||(34160731-34160796)
chr5 (51-108)||(39594809-39594866)
chr5 (45-86)||(40848769-40848810)
chr5 (42-110)||(1636771-1636838)
chr5 (128-187)||(7096213-7096273)
chr5 (133-204)||(29115304-29115376)
chr5 (46-180)||(36796712-36796845)
chr5 (44-124)||(37526203-37526283)
chr5 (56-185)||(912663-912793)
chr5 (32-111)||(6587099-6587178)
chr5 (50-125)||(7319391-7319466)
chr5 (44-184)||(16863708-16863846)
chr5 (50-175)||(16889671-16889795)
chr5 (68-111)||(28776992-28777035)
chr5 (125-183)||(35135745-35135804)
chr5 (44-114)||(12460005-12460075)
chr5 (32-160)||(14295457-14295584)
chr5 (35-141)||(18543192-18543296)
chr5 (44-110)||(42582912-42582978)
chr5 (32-85)||(8177524-8177577)
chr5 (35-96)||(12521542-12521603)
chr5 (90-185)||(19177405-19177499)
chr5 (133-185)||(20982226-20982279)
chr5 (136-204)||(29588787-29588856)
chr5 (49-126)||(36639506-36639583)
chr5 (44-124)||(37690640-37690721)
chr5 (32-96)||(1899168-1899232)
chr5 (51-111)||(10272442-10272502)
chr5 (136-195)||(10391269-10391329)
chr5 (47-111)||(33533546-33533610)
chr5 (125-184)||(37063157-37063217)
chr5 (145-185)||(37489411-37489451)
chr5 (133-180)||(40048371-40048419)
[»] chr1 (67 HSPs)
chr1 (34-166)||(10199402-10199533)
chr1 (34-111)||(34290235-34290312)
chr1 (49-110)||(35179139-35179200)
chr1 (47-111)||(7137005-7137069)
chr1 (71-180)||(33527178-33527286)
chr1 (40-190)||(41638308-41638459)
chr1 (40-185)||(52286604-52286748)
chr1 (40-111)||(14629966-14630037)
chr1 (144-195)||(49125750-49125801)
chr1 (32-110)||(6292493-6292571)
chr1 (44-160)||(31517744-31517859)
chr1 (32-112)||(6102152-6102233)
chr1 (147-224)||(14128577-14128654)
chr1 (47-111)||(2777891-2777955)
chr1 (93-203)||(30259540-30259649)
chr1 (40-104)||(38867831-38867895)
chr1 (125-185)||(45107549-45107609)
chr1 (47-107)||(45975693-45975753)
chr1 (133-224)||(49557028-49557120)
chr1 (44-123)||(4576792-4576871)
chr1 (35-110)||(5886989-5887064)
chr1 (75-184)||(17269177-17269285)
chr1 (51-144)||(4548689-4548780)
chr1 (49-111)||(26779934-26779996)
chr1 (32-110)||(27140478-27140556)
chr1 (147-185)||(47885114-47885152)
chr1 (32-125)||(1565527-1565620)
chr1 (44-125)||(3063361-3063442)
chr1 (56-125)||(7472296-7472365)
chr1 (50-103)||(12564509-12564562)
chr1 (150-199)||(16980738-16980787)
chr1 (39-104)||(28077068-28077133)
chr1 (45-86)||(38503470-38503511)
chr1 (47-111)||(3234022-3234086)
chr1 (51-111)||(32113657-32113717)
chr1 (44-100)||(37593688-37593744)
chr1 (47-111)||(42174854-42174918)
chr1 (116-178)||(4699686-4699749)
chr1 (44-111)||(10744300-10744367)
chr1 (44-185)||(16981940-16982080)
chr1 (44-111)||(25479580-25479647)
chr1 (32-124)||(28689444-28689538)
chr1 (40-165)||(29007716-29007840)
chr1 (44-111)||(37842359-37842426)
chr1 (45-108)||(38116083-38116146)
chr1 (128-226)||(49173290-49173389)
chr1 (32-110)||(11639408-11639486)
chr1 (32-110)||(14443449-14443527)
chr1 (43-85)||(15361065-15361107)
chr1 (48-110)||(15558217-15558279)
chr1 (31-97)||(46252673-46252739)
chr1 (45-103)||(51695500-51695558)
chr1 (48-110)||(51929783-51929845)
chr1 (45-110)||(15784329-15784394)
chr1 (49-110)||(16322849-16322910)
chr1 (44-125)||(30371133-30371214)
chr1 (58-103)||(49888774-49888819)
chr1 (47-111)||(473163-473227)
chr1 (74-110)||(1865115-1865151)
chr1 (145-185)||(4202233-4202273)
chr1 (45-117)||(17577773-17577845)
chr1 (145-224)||(24146363-24146442)
chr1 (47-111)||(24915058-24915122)
chr1 (32-108)||(27963362-27963438)
chr1 (125-224)||(44936673-44936773)
chr1 (92-166)||(49517015-49517088)
chr1 (34-172)||(49692046-49692181)
[»] chr2 (63 HSPs)
chr2 (32-104)||(8017440-8017512)
chr2 (51-111)||(42621386-42621446)
chr2 (32-111)||(29316767-29316846)
chr2 (75-185)||(3102619-3102728)
chr2 (32-95)||(28677651-28677714)
chr2 (44-110)||(1625900-1625966)
chr2 (92-180)||(10143103-10143190)
chr2 (51-109)||(16398115-16398173)
chr2 (45-103)||(35379021-35379079)
chr2 (88-174)||(39621890-39621973)
chr2 (58-203)||(11513809-11513950)
chr2 (32-109)||(40158719-40158796)
chr2 (32-144)||(44438831-44438941)
chr2 (45-125)||(9395115-9395195)
chr2 (45-109)||(40279268-40279332)
chr2 (45-109)||(40279338-40279402)
chr2 (70-179)||(2416245-2416353)
chr2 (44-103)||(38078414-38078473)
chr2 (44-180)||(4026748-4026883)
chr2 (59-175)||(5133708-5133823)
chr2 (50-124)||(6227737-6227811)
chr2 (31-109)||(7871644-7871722)
chr2 (43-116)||(6718537-6718609)
chr2 (45-86)||(7928304-7928345)
chr2 (50-111)||(13869105-13869166)
chr2 (68-125)||(18066113-18066170)
chr2 (45-114)||(26143645-26143714)
chr2 (44-125)||(33931574-33931655)
chr2 (45-110)||(40279197-40279262)
chr2 (45-110)||(40682400-40682464)
chr2 (141-225)||(2400042-2400126)
chr2 (133-184)||(3673734-3673786)
chr2 (92-190)||(17952753-17952850)
chr2 (133-224)||(33197330-33197422)
chr2 (44-111)||(1893285-1893352)
chr2 (68-111)||(6167311-6167354)
chr2 (45-112)||(9174813-9174880)
chr2 (48-103)||(15977992-15978047)
chr2 (127-185)||(28803591-28803650)
chr2 (58-125)||(33319830-33319897)
chr2 (44-111)||(36415677-36415744)
chr2 (47-125)||(1493520-1493598)
chr2 (32-110)||(10567057-10567135)
chr2 (68-114)||(21616655-21616701)
chr2 (45-107)||(26626876-26626938)
chr2 (40-149)||(35485880-35485987)
chr2 (135-185)||(35809859-35809909)
chr2 (68-110)||(42409331-42409373)
chr2 (58-111)||(12464491-12464544)
chr2 (45-110)||(16451118-16451183)
chr2 (44-125)||(22681189-22681270)
chr2 (32-144)||(33256708-33256818)
chr2 (68-109)||(40279408-40279449)
chr2 (44-101)||(44443330-44443387)
chr2 (129-228)||(5867278-5867378)
chr2 (96-182)||(11344340-11344425)
chr2 (47-111)||(16867738-16867802)
chr2 (58-110)||(23974510-23974562)
chr2 (47-111)||(26202027-26202091)
chr2 (45-125)||(28039337-28039417)
chr2 (127-190)||(37053515-37053579)
chr2 (50-106)||(42457952-42458008)
chr2 (93-179)||(43199346-43199431)
[»] chr3 (53 HSPs)
chr3 (44-180)||(36783338-36783474)
chr3 (32-110)||(39602202-39602280)
chr3 (32-179)||(20192598-20192744)
chr3 (49-185)||(34924547-34924681)
chr3 (34-111)||(52440656-52440733)
chr3 (49-111)||(2719467-2719529)
chr3 (127-205)||(3015934-3016012)
chr3 (44-110)||(20669172-20669238)
chr3 (40-125)||(33405166-33405252)
chr3 (36-110)||(36887504-36887578)
chr3 (44-110)||(40665429-40665495)
chr3 (45-110)||(21367667-21367732)
chr3 (44-113)||(33883754-33883823)
chr3 (43-185)||(54775054-54775194)
chr3 (49-195)||(38462197-38462342)
chr3 (58-105)||(3845580-3845627)
chr3 (50-109)||(41633361-41633420)
chr3 (56-111)||(50600194-50600249)
chr3 (32-110)||(1217792-1217870)
chr3 (68-184)||(24158531-24158645)
chr3 (45-123)||(34610811-34610889)
chr3 (134-203)||(39971227-39971297)
chr3 (45-114)||(26320107-26320176)
chr3 (44-180)||(30573918-30574051)
chr3 (44-109)||(37273135-37273200)
chr3 (56-124)||(14548737-14548805)
chr3 (136-195)||(20173982-20174042)
chr3 (49-175)||(23785191-23785316)
chr3 (47-111)||(28622006-28622070)
chr3 (59-111)||(44747427-44747479)
chr3 (68-111)||(4526396-4526439)
chr3 (135-185)||(16790181-16790232)
chr3 (68-111)||(22203429-22203472)
chr3 (68-107)||(32582747-32582786)
chr3 (68-111)||(46886720-46886763)
chr3 (93-193)||(32064358-32064456)
chr3 (44-86)||(47249490-47249532)
chr3 (70-111)||(18405861-18405902)
chr3 (74-107)||(23816053-23816086)
chr3 (125-185)||(27792798-27792859)
chr3 (58-111)||(30443892-30443945)
chr3 (59-144)||(34254827-34254911)
chr3 (133-185)||(41028942-41028995)
chr3 (32-101)||(45541580-45541649)
chr3 (44-108)||(2128262-2128326)
chr3 (49-109)||(12985354-12985414)
chr3 (145-185)||(25185919-25185959)
chr3 (47-111)||(25776116-25776180)
chr3 (145-185)||(28283681-28283721)
chr3 (47-111)||(39980728-39980792)
chr3 (42-114)||(47319273-47319345)
chr3 (127-202)||(51278242-51278318)
chr3 (32-104)||(54180772-54180844)
[»] scaffold0024 (2 HSPs)
scaffold0024 (93-224)||(27463-27593)
scaffold0024 (68-110)||(21313-21355)
[»] chr6 (37 HSPs)
chr6 (47-166)||(2735014-2735132)
chr6 (41-180)||(4006645-4006783)
chr6 (34-185)||(6647315-6647463)
chr6 (72-111)||(24982704-24982743)
chr6 (32-111)||(31624089-31624168)
chr6 (125-184)||(32513752-32513811)
chr6 (43-185)||(5328900-5329040)
chr6 (34-181)||(27893977-27894122)
chr6 (56-111)||(835265-835320)
chr6 (56-185)||(29274245-29274373)
chr6 (56-180)||(9093572-9093695)
chr6 (45-111)||(9109256-9109322)
chr6 (44-185)||(8010283-8010423)
chr6 (68-125)||(20861727-20861784)
chr6 (145-222)||(31461567-31461644)
chr6 (44-185)||(32386110-32386243)
chr6 (55-111)||(836556-836612)
chr6 (44-127)||(4246393-4246476)
chr6 (73-182)||(6654544-6654652)
chr6 (68-111)||(8201232-8201275)
chr6 (68-185)||(8420225-8420341)
chr6 (82-140)||(9604821-9604877)
chr6 (79-184)||(10016472-10016576)
chr6 (169-224)||(14340931-14340986)
chr6 (47-125)||(14492287-14492365)
chr6 (127-184)||(32975905-32975963)
chr6 (68-110)||(33787773-33787815)
chr6 (48-110)||(34430469-34430531)
chr6 (45-111)||(34910414-34910480)
chr6 (45-110)||(2455259-2455324)
chr6 (133-190)||(26564892-26564949)
chr6 (126-178)||(2034523-2034575)
chr6 (126-185)||(2514628-2514688)
chr6 (51-123)||(10616552-10616624)
chr6 (156-228)||(13907739-13907811)
chr6 (156-204)||(27727189-27727237)
chr6 (145-185)||(31668789-31668829)
[»] scaffold0590 (1 HSPs)
scaffold0590 (125-185)||(1157-1218)
[»] scaffold0275 (1 HSPs)
scaffold0275 (125-185)||(2757-2818)
[»] scaffold0100 (1 HSPs)
scaffold0100 (130-227)||(42501-42599)
[»] scaffold0654 (1 HSPs)
scaffold0654 (144-199)||(6740-6795)
[»] scaffold0014 (1 HSPs)
scaffold0014 (144-199)||(116659-116714)
[»] scaffold0221 (1 HSPs)
scaffold0221 (58-112)||(22229-22283)
[»] scaffold0508 (1 HSPs)
scaffold0508 (144-185)||(9878-9919)
[»] scaffold0167 (1 HSPs)
scaffold0167 (74-123)||(17263-17312)
[»] scaffold0349 (1 HSPs)
scaffold0349 (156-204)||(5768-5816)


Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 4 - 280
Target Start/End: Original strand, 47559565 - 47559847
Alignment:
Q  4 ggcataaacacatctgaaactgattcgtacagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47559565 ggcataaacacatctgaaactgattcgtagagcttttgacatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 47559664  T
Q  104 gcttatagtttgtataaaaa-catagttttacttta-----ttttatttttgttgtagaaataacttattcataagcacttatatgattagtgtttatat 197  Q
    |||||||||||||||||||| |||||||||||||||     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47559665 gcttatagtttgtataaaaaacatagttttactttattttattttatttttgttgtagaaataacttattcataagcacttatatgattagtgtttatat 47559764  T
Q  198 tataagcataaaattaagttgtttatctaaataggtcgaaaggcaaaacgatttcattaataagcaaaactagactgcttctt 280  Q
    |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  47559765 tataagcatataattaagttgtttatctaaatagggcgaaaggcaaaacgatttcattaataagcaaaactagactgcttctt 47559847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 48 - 179
Target Start/End: Original strand, 27378836 - 27378965
Alignment:
Q  48 tcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttt 147  Q
    ||||||||||||||| | | ||||||||||| ||||||  |||  |||||||||||| || |||||| ||| |||||  |||| |||||||||||| |||    
T  27378836 tcataagttgttttcagtttattttcataagctctccaggatagtttatgaaaacagattgtagtttatatgaaaac--agttctactttattttacttt 27378933  T
Q  148 tgttgtagaaataacttattcataagcactta 179  Q
    |||  |||||||| ||||| ||||||||||||    
T  27378934 tgtaatagaaatagcttatacataagcactta 27378965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 50 - 110
Target Start/End: Complemental strand, 44822019 - 44821959
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||||||  || |||||||||||||||||| |||| |||||||||||||||||||    
T  44822019 ataagttgttttcaacttattttcataagttctccagaatagcttatgaaaacagcttata 44821959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 22388008 - 22388087
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    ||||||| |||||||| ||||| |||||||||||| ||||| ||||||||| ||||||||    ||||||||||||||||    
T  22388008 ttttgttatagaaatagcttatccataagcacttaaatgataagtgtttatgttataagcgcttaattaagttgtttatc 22388087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 20526505 - 20526414
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat 144  Q
    |||| ||||||  ||| |||||||| |||||||||||||| ||||||||||||||||||||  ||  || ||||||| ||| ||||||||||||    
T  20526505 taagctgtttttagcttattttcattagttctccaaaatagcttatgaaaacagcttatagcatg--tacaaacataatttaactttattttat 20526414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 48 - 104
Target Start/End: Complemental strand, 7244742 - 7244686
Alignment:
Q  48 tcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacag 104  Q
    ||||||||||||||| ||| ||||||||||| ||||||| ||| |||||||||||||    
T  7244742 tcataagttgttttcagcttattttcataagctctccaatatagcttatgaaaacag 7244686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 201
Target Start/End: Original strand, 9527142 - 9527250
Alignment:
Q  92 cttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtg 190  Q
    |||||||||||| |||||||||| ||| |||||  ||||| |||||||| ||| ||||||| |||| ||| | |||  |||||||||| |||||| ||||    
T  9527142 cttatgaaaacaacttatagtttatatgaaaac--agtttgactttattatatcttttgttatagatatagcgtatatataagcacttgtatgataagtg 9527239  T
Q  191 tttatattata 201  Q
    |||||| ||||    
T  9527240 tttatactata 9527250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 185
Target Start/End: Complemental strand, 47004105 - 47004013
Alignment:
Q  92 cttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||||||||||||||||||  |||||||  ||||||| |||||||||||| | ||||| |||||||| ||||   |||| ||||||||||||    
T  47004105 cttatgaaaacagcttatagttcatataaaa--atagtttgactttattttatctattgttatagaaatagcttacatataaacacttatatgat 47004013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 3610844 - 3610894
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgattagtgtttat 195  Q
    |||||||||||||||| ||||| |||||||||||||||||  |||||||||    
T  3610844 ttttgttgtagaaatagcttatacataagcacttatatgacaagtgtttat 3610894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 40252135 - 40252177
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||||||||||| |||||||||||||| ||||||||    
T  40252135 attttcataagttctccaagataacttatgaaaagagcttata 40252177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 6552365 - 6552414
Alignment:
Q  137 tattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||| |||||||||||||||||||| | ||||||||||||||||||    
T  6552365 tattttatcttttgttgtagaaataacttgtacataagcacttatatgat 6552414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 19022592 - 19022656
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||| |||  || ||||||||||||||||||| ||| ||||| |||||| |||||||    
T  19022592 ttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaacttatag 19022656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 179
Target Start/End: Complemental strand, 28165156 - 28165023
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat 144  Q
    |||||||||| |||||||  || |||| |||||| ||||||  ||| ||||| || |||| |||||| || ||| ||||||   ||| |||| |||||||    
T  28165156 tgttcataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaa--tttgacttcattttat 28165059  T
Q  145 -ttttgttgtagaaataacttattcataagcactta 179  Q
     ||||||| |||||| ||||||| ||||||||||||    
T  28165058 cttttgttatagaaagaacttatacataagcactta 28165023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 43 - 114
Target Start/End: Original strand, 2825234 - 2825305
Alignment:
Q  43 tatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    |||||||||||||| ||||| ||| |||| ||||||||||| |  ||| ||| |||||||| ||||||||||    
T  2825234 tatgttcataagttattttcagcttatttccataagttctctaggatagcttgtgaaaacaacttatagttt 2825305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 144
Target Start/End: Complemental strand, 5947247 - 5947153
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat 144  Q
    |||||||| | ||||| ||| |||||||||| |||||| | ||| |||||||| ||||||||||||   |||| ||| | ||||| ||||||||||||    
T  5947247 ttcataagctcttttcagcttattttcataacttctcctagatagcttatgaatacagcttatagt---tatacaaatacagtttaactttattttat 5947153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 9038189 - 9038111
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| ||| |||||||||| |||||||| ||| ||||||| ||||||||||  |||  |||||||||||| ||||||    
T  9038189 acagcttatgacatgttcataa-ttgttttcagcttattttcacaagttctccatgatagtttatgaaaacagtttatag 9038111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 12110402 - 12110359
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||| ||| ||| ||||||||||||||||||||    
T  12110402 attttcataagttcttcaagatagcttatgaaaacagcttatag 12110359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 232
Target Start/End: Complemental strand, 27508153 - 27508074
Alignment:
Q  153 tagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatctaaatagg 232  Q
    ||||||||||||||||| |||  |||||||||| |||||||   ||||||||   |||||||| |||||||| |||||||    
T  27508153 tagaaataacttattcacaagtgcttatatgataagtgttttggttataagctgcaaattaagctgtttatcaaaatagg 27508074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 124
Target Start/End: Complemental strand, 33678845 - 33678766
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaac 124  Q
    ||||||| || |||||||  || ||||||| ||||| ||||| ||| |||||||||||||||||||| || || ||||||    
T  33678845 tgttcatgagatgttttcaacttattttcacaagttttccaagatagcttatgaaaacagcttatagcttttacaaaaac 33678766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 160
Target Start/End: Original strand, 40688993 - 40689105
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-t 145  Q
    |||||||| ||||||  ||| ||||||||||||| ||||  ||| |||||||| ||||||||||| || ||| |||  ||| ||| |||||||||||| |    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaa--ataatttaactttattttatct 40689090  T
Q  146 tttgttgtagaaata 160  Q
    |||| | ||||||||    
T  40689091 tttgctatagaaata 40689105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 43648303 - 43648240
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||| |||||  || |||||||||  |||||||| ||| |||||||||||||||||||    
T  43648303 ttcataagttcttttcaacttattttcatattttctccaagatagcttatgaaaacagcttata 43648240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 46280300 - 46280343
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||||| ||| ||||| ||||||||||||||    
T  46280300 attttcataagttctccaatatagcttataaaaacagcttatag 46280343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 181
Target Start/End: Original strand, 1350348 - 1350382
Alignment:
Q  147 ttgttgtagaaataacttattcataagcacttata 181  Q
    ||||| |||||||||||||||||||||||||||||    
T  1350348 ttgttatagaaataacttattcataagcacttata 1350382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 139 - 185
Target Start/End: Complemental strand, 45078265 - 45078219
Alignment:
Q  139 ttttatttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||||||||| || ||||| ||||| ||||||||||||||||||    
T  45078265 ttttatttttgttataaaaatagcttatacataagcacttatatgat 45078219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Original strand, 22551397 - 22551466
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 101  Q
    ||||||| ||| ||||||| | ||||||||| ||| |||| |||||| ||||||| || |||||||||||    
T  22551397 acagcttatgacatgttcaaatgttgttttcagcttatttacataagctctccaagattacttatgaaaa 22551466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 92 - 183
Target Start/End: Complemental strand, 25827410 - 25827320
Alignment:
Q  92 cttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatt-tttgttgtagaaataacttattcataagcacttatatg 183  Q
    |||||||||||||||||||| || || | |||||   ||||| ||||||||||  |||| ||||||||||  |||||||||||| ||||||||    
T  25827410 cttatgaaaacagcttatagattttacacaaacaa--ttttagtttattttatcgtttgctgtagaaatagtttattcataagcgcttatatg 25827320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 37064482 - 37064535
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||| ||| |||||||||||| ||| |||||| |||| |||||||||||||||    
T  37064482 ttttcagcttattttcataagtcctctaaaatagcttacgaaaacagcttatag 37064535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 38010780 - 38010699
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||||||| ||||||  ||| |||| ||||||||||| |  |||  ||||||||||||||||||| || ||| ||||||    
T  38010780 atgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaaca 38010699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 39907869 - 39907788
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||||||| || ||||||| ||| |||||||| ||||||| || |||  |||||||||||| |||||| || || |||||||    
T  39907869 atgttcattagctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaaca 39907788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 40439037 - 40438986
Alignment:
Q  147 ttgttgtagaaataacttatt---cataagcacttatatgattagtgtttat 195  Q
    ||||| |||||||||||| ||   ||||||||||||||||||||||||||||    
T  40439037 ttgttatagaaataacttgttatacataagcacttatatgattagtgtttat 40438986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 46104332 - 46104373
Alignment:
Q  70 tttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||| ||| ||||||||||||||||| ||||||    
T  46104332 tttcataagttcttcaagataacttatgaaaacagtttatag 46104373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 46213782 - 46213729
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||||||| ||||||| |||||||| ||| | ||||||||||||||||||    
T  46213782 actttattttatattttgttatagaaatagcttttacataagcacttatatgat 46213729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 47177678 - 47177621
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||||||||| |||||||| ||| ||| |||||||||||||||| || ||| ||||||    
T  47177678 attttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaaca 47177621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 49019920 - 49019867
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| | ||||||||||||||| ||| ||||||||| |||| |||||||||    
T  49019920 ttttcggtttattttcataagttctacaatataacttataaaaatagcttatag 49019867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 49060556 - 49060466
Alignment:
Q  94 tatgaaaacagcttatagtttgtataaaaacatagttttactttattttattttt-gttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||| | ||||||| || ||||||||  || ||| |||||||||||||||| ||| |||||||| ||||| |||||  |||||||||||    
T  49060556 tatgaaaataacttatagcttatataaaaa--taatttgactttattttattttttgttatagaaatagcttatacataaatacttatatgat 49060466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 106
Target Start/End: Complemental strand, 529439 - 529379
Alignment:
Q  46 gttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagct 106  Q
    ||||||||| |||||||  |  ||||||||||| ||||||| ||| |||||||||||||||    
T  529439 gttcataagctgttttcaacatattttcataagctctccaagatagcttatgaaaacagct 529379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 991218 - 991178
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||| ||||||||||||| || |||||||||||||||    
T  991218 ttttgttgcagaaataacttatacacaagcacttatatgat 991178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 134 - 185
Target Start/End: Complemental strand, 992048 - 991996
Alignment:
Q  134 ctttattttattttt-gttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||||||||||| ||| |||||| ||||||| | ||||||||||||||||    
T  992048 ctttattttattttttgttatagaaacaacttatacgtaagcacttatatgat 991996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 128 - 195
Target Start/End: Original strand, 3279638 - 3279706
Alignment:
Q  128 gttttactttatttta-tttttgttgtagaaataacttattcataagcacttatatgattagtgtttat 195  Q
    |||| ||||||||| | |||||||| |||||||||||||| ||||||||  ||||| |||||| |||||    
T  3279638 gtttgactttatttgagtttttgttatagaaataacttatacataagcaaatatataattagtatttat 3279706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 15309593 - 15309633
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagctta 108  Q
    |||||||||| |||||| |||||||||||||||||| ||||    
T  15309593 attttcataaattctccgaaataacttatgaaaacaactta 15309633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 25596092 - 25596032
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||  || ||||||||||| ||||||| ||| |||||||||| || ||||||    
T  25596092 taagttgttttcaacttattttcataagctctccaagatagcttatgaaaagagtttatag 25596032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 34744080 - 34744028
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||| || ||||| ||||||||||||| ||| |||||||||||| ||||||    
T  34744080 ttttcgccttatttttataagttctccaatatagcttatgaaaacaacttata 34744028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 39279826 - 39279762
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||| ||||| ||| | ||| ||||| ||||||| ||||| ||||||||||||| ||||||||||    
T  39279826 ttcacaagttttttacagctaatttttataagttttccaagataacttatgaaaccagcttatag 39279762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 43250691 - 43250755
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttat 96  Q
    ||||||| ||| |||||| |||||||||||| | | || |||||||| ||||||||||| |||||    
T  43250691 acagcttatgacatgttcgtaagttgttttcagtttatattcataagctctccaaaatagcttat 43250755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 40 - 185
Target Start/End: Original strand, 28769339 - 28769483
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttat 139  Q
    |||||||| |||||||||||||| ||| |||| |||||  ||||||||||| |||||||||||||||||||| |  ||||| || ||||||| |||| ||    
T  28769339 tgatatgtccataagttgttttcagcttatttccataaactctccaaaatagcttatgaaaacagcttatagct--tataagaaaatagtttgacttaat 28769436  T
Q  140 tttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||  |||||| ||| |||| ||||| |||||||| |||||||||    
T  28769437 tttatagtttgttataggaatagcttatacataagcatttatatgat 28769483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 122
Target Start/End: Complemental strand, 30389165 - 30389087
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaa 122  Q
    ||||||||||||||||||| ||| |||||||||||||||| |  | | |||||||||||||| ||||| || |||||||    
T  30389165 atgttcataagttgttttcagcttattttcataagttctctaggaaagcttatgaaaacagcgtatagcttatataaaa 30389087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 34563234 - 34563136
Alignment:
Q  128 gttttactttattttatt-tttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatct 225  Q
    |||| ||||||||||||  |||||  ||||||||||||||  ||||||||||||||||| | |||||||  ||||||| |  |||||||||||||||||    
T  34563234 gtttgactttattttatcctttgtcatagaaataacttatatataagcacttatatgataaatgtttatgctataagcgtttaattaagttgtttatct 34563136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 9956819 - 9956884
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||| |||||| ||| ||||||||||||||||||| |||  ||||||||||| ||||||    
T  9956819 tgttcataagtagttttcagcttattttcataagttctccaagatagattatgaaaacaacttata 9956884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 144
Target Start/End: Original strand, 33714241 - 33714337
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat 144  Q
    |||||||||| ||||||| ||| ||||| ||||| ||||| | ||| |||||||||| ||||||||| ||||| ||||   |||||| ||||||||||||    
T  33714241 tgttcataagctgttttcagcttatttttataagctctcccagatagcttatgaaaatagcttatagattgtacaaaa---tagtttgactttattttat 33714337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Original strand, 40280292 - 40280349
Alignment:
Q  129 ttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||||||||||| ||||||||||||||||||||||  ||| |||||||||||||    
T  40280292 ttttactttattttatcttttgttgtagaaataacttatatataggcacttatatgat 40280349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 27028894 - 27028830
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| | ||||| ||| ||||||||||| ||||||| ||| ||||||||||||||||||||    
T  27028894 ttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatag 27028830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 204
Target Start/End: Complemental strand, 35869865 - 35869744
Alignment:
Q  82 tccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttat 180  Q
    |||| |||| |||||||||||| ||||||| || ||| ||||  | |||| | |||||||||| |||||||||||||||  ||||| |||||| ||||||    
T  35869865 tccacaatagcttatgaaaacaacttatagcttatatgaaaa--ttgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttat 35869768  T
Q  181 atgattagtgtttatattataagc 204  Q
    ||||| |||| ||||  |||||||    
T  35869767 atgataagtgcttatgctataagc 35869744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 40728421 - 40728562
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataactt-atgaaaacagcttatagtttgtataaaaacatagttttactttatttt 142  Q
    ||||||||||| | ||||| | | |||| |||||||  ||||| ||||||| || ||||||| ||||   ||||| |||||||  |||| ||||||||||    
T  40728421 atgttcataagatattttcagtttatttccataagtattccaagataactttattaaaacaggttatgacttgtaaaaaaaca--gtttgactttatttt 40728518  T
Q  143 at-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    || ||||||| |||||||||||||| ||| | ||||||||||||    
T  40728519 atcttttgttatagaaataacttatgcatgaacacttatatgat 40728562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 26820216 - 26820144
Alignment:
Q  93 ttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttat 166  Q
    |||||||||| |||||||||||  |||| || ||||||| |||||||||||| ||||||| ||||||||||||||    
T  26820216 ttatgaaaacggcttatagttt--ataacaaaatagtttgactttattttatcttttgttatagaaataacttat 26820144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 42597419 - 42597331
Alignment:
Q  92 cttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttata 181  Q
    |||||||||||| ||||||| ||| || |||||  | |||||||||||||||| ||||||| |||||||| ||||| |||||| |||||||    
T  42597419 cttatgaaaacaacttatagcttgcatgaaaac--aattttactttattttatcttttgttatagaaatagcttatacataagtacttata 42597331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 11569449 - 11569527
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||| |||| |||||||||||||| ||| ||||||| ||  ||||||  ||| |||||||||||||||||||    
T  11569449 acagcttatgacatgtacataagttgttttcagcttattttcaaaatctctccatgatagcttatgaaaacagcttata 11569527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 181
Target Start/End: Complemental strand, 14905236 - 14905125
Alignment:
Q  69 ttttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttatt 167  Q
    |||||||||| | ||||  |||||||||||||| |||||| || ||| | ||||||  ||||| |||||||||||| || |||| || ||||| ||||||    
T  14905236 ttttcataagatatccaggataacttatgaaaatagcttaaagattggacaaaaac--agtttgactttattttatgttatgttctataaatagcttatt 14905139  T
Q  168 cataagcacttata 181  Q
    ||||||| ||||||    
T  14905138 cataagctcttata 14905125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 1930100 - 1930035
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||| ||||||| ||| ||||||| ||| || |||| ||| |||||||||||||||||||    
T  1930100 tgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaacagcttata 1930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 103
Target Start/End: Original strand, 35534631 - 35534676
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    ||||||||| | ||||||||||||||||| ||||||||||||||||    
T  35534631 ttttcggcttactttcataagttctccaatataacttatgaaaaca 35534676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 42215086 - 42215143
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 101  Q
    ||||||||||||||||||| ||| |||| |||||| ||||||| ||| ||||||||||    
T  42215086 atgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaa 42215143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 42764345 - 42764252
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||||| | | || |||||||||||| ||||| |||||  |||| ||| ||  |||||||||||||| ||||||||| |||||| ||||||    
T  42764345 acagcttttaacaagtccataagttgtttacggctgattttattaagctcttcaggataacttatgaaaatagcttatagcttgtatgaaaaca 42764252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 108
Target Start/End: Complemental strand, 38874688 - 38874648
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagctta 108  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  38874688 attttcatatgttctccaaaatagcttatgaaaacagctta 38874648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 10114543 - 10114488
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| ||| ||||||||| ||||||||| ||| || |||||||||||||||||    
T  10114543 tgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatag 10114488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 125
Target Start/End: Complemental strand, 12361268 - 12361177
Alignment:
Q  34 agcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||| ||| |||| |||||| |||||||  || |||| ||| || |||||  ||||||||||||||||||||||||| || ||| ||||||    
T  12361268 agcttatgacatgtccataagctgttttcaacttatttccattagctctcctgaataacttatgaaaacagcttatagcttatatgaaaaca 12361177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 27754464 - 27754401
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtt 113  Q
    ||||||||  ||| ||| ||||||||||| ||||||||||| |||||||||||  |||||||||    
T  27754464 ataagttgcgttcagcttattttcataagctctccaaaatagcttatgaaaaccacttatagtt 27754401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 231
Target Start/End: Complemental strand, 29699233 - 29699134
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatctaaatag 231  Q
    |||||||||||| ||||||| |||||||||||| | |||||||| ||||||||| | | |||||  ||||||||   || ||||| ||||||| ||||||    
T  29699233 actttattttatcttttgttatagaaataacttgtacataagcatttatatgataaatatttatgctataagcacttaactaagtcgtttatccaaatag 29699134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 103
Target Start/End: Complemental strand, 30259192 - 30259121
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    ||||||| ||||||||  ||||||||||||| | | |||| |||||||||||||| |||| |||| ||||||    
T  30259192 acagcttatgatatgtctataagttgttttcagtttatttccataagttctccaagataatttataaaaaca 30259121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 49 - 166
Target Start/End: Complemental strand, 31862554 - 31862438
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttt 147  Q
    |||||| ||||||| ||| ||||||||||| |||| |  |||||||||||||||| ||||||| |  ||||  |  ||||||| ||||||| |||| |||    
T  31862554 cataagctgttttcagcttattttcataagctctctaggataacttatgaaaacatcttatagct--tatacgagaatagtttgactttatattatcttt 31862457  T
Q  148 tgttgtagaaataacttat 166  Q
    |||| | ||||||||||||    
T  31862456 tgttattgaaataacttat 31862438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 41620295 - 41620435
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    |||| |||||||||||||| ||| ||||||| ||| ||  ||| ||| ||||| |||||||||| |||    ||||  |||||| ||| |||||||||||    
T  41620295 atgtccataagttgttttccgcttattttcaaaagctcgacaagatagcttataaaaacagcttttag--aatatatgaacataatttgactttatttta 41620392  T
Q  144 t-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    | |||||||  | |||||||||||  |||||||||| ||||||    
T  41620393 tcttttgttacaaaaataacttatatataagcacttgtatgat 41620435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 185
Target Start/End: Original strand, 2107362 - 2107470
Alignment:
Q  73 cataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttttgttgtagaaataacttattcataa 172  Q
    |||||| ||||||| ||| |||||||||||||  |||||||| | | ||||||   ||| |||  ||||||| ||||  ||||||||||||||| |||||    
T  2107362 cataagctctccaagatagcttatgaaaacaggctatagtttatgtgaaaacaa--tttgact--attttatctttgcggtagaaataacttatacataa 2107457  T
Q  173 gcacttatatgat 185  Q
    | |||||||||||    
T  2107458 gaacttatatgat 2107470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 2699293 - 2699251
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttat 166  Q
    ||||||| |||||||||||| ||||||||||||||||||||||    
T  2699293 atagtttaactttattttatattttgttgtagaaataacttat 2699251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 5069763 - 5069697
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||||  ||||| ||| ||||||||||| | || || ||| |||||||||||||||||||    
T  5069763 atgttcataagtcattttcagcttattttcataagctttcgaagatatcttatgaaaacagcttata 5069697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 56 - 114
Target Start/End: Original strand, 14247240 - 14247298
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    ||||||| ||| |||||||||||||||| |  ||| |||| ||||||||||||||||||    
T  14247240 tgttttcagcttattttcataagttctctacgatatcttacgaaaacagcttatagttt 14247298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 101
Target Start/End: Complemental strand, 30918176 - 30918122
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 101  Q
    |||||||||||||||| ||| |||| |||||| ||||||| | ||||||||||||    
T  30918176 ttcataagttgttttcagcttatttccataagctctccaagaaaacttatgaaaa 30918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 180
Target Start/End: Complemental strand, 32507038 - 32506988
Alignment:
Q  131 ttactttattttat-ttttgttgtagaaataacttattcataagcacttat 180  Q
    |||| ||||||||| |||||||||||||||||||||| ||||| |||||||    
T  32507038 ttacgttattttatcttttgttgtagaaataacttatacataaacacttat 32506988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 182
Target Start/End: Complemental strand, 42476072 - 42476034
Alignment:
Q  144 tttttgttgtagaaataacttattcataagcacttatat 182  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  42476072 tttttgttacagaaataacttattcataagcacttatat 42476034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 43504816 - 43504750
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||| ||||| ||||||| ||| |||| |||||||||||||| ||| ||||| |||||| |||||||    
T  43504816 tgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatag 43504750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 43717945 - 43718007
Alignment:
Q  48 tcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||||||  ||| | ||||||||||||||||| ||| |||||| ||||||||||||    
T  43717945 tcataagctgtttttagcttactttcataagttctccaagatagcttatgcaaacagcttata 43718007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 1113123 - 1113058
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||| ||||||  ||| ||||||||||||||||||| |||   |||| ||||||||||||    
T  1113123 tgttcataagctgtttttagctaattttcataagttctccaagatagtgtatgtaaacagcttata 1113058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 2482932 - 2482833
Alignment:
Q  41 gatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatt 140  Q
    |||| ||||||||| ||||||| ||| ||||  ||||||| ||||| ||| |  ||||||||||||||||| || || ||||||||  ||| ||||||||    
T  2482932 gataagttcataagctgttttcagcttatttctataagttatccaagatagc--atgaaaacagcttatagcttatacaaaaacat--tttgactttatt 2482837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 11188248 - 11188297
Alignment:
Q  135 tttattttat-ttttgttgtagaaataacttattcataagcacttatatg 183  Q
    |||||||||| ||||||| |||||| ||||||| ||||||||||||||||    
T  11188248 tttattttatcttttgttatagaaacaacttatacataagcacttatatg 11188297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 14482181 - 14482128
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||||||| ||||||| ||||||||  |||| ||||||||||||||||||    
T  14482181 actttattttatcttttgttatagaaatagtttatacataagcacttatatgat 14482128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 104
Target Start/End: Complemental strand, 20672825 - 20672756
Alignment:
Q  35 gcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacag 104  Q
    |||| ||| ||||||||||| ||||||| ||| ||||||||||| ||||||  ||| ||||| |||||||    
T  20672825 gcttatgacatgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacag 20672756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 26813908 - 26813949
Alignment:
Q  144 tttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||| ||||||||| |||| ||||||||||||||||||    
T  26813908 tttttgttatagaaataatttatacataagcacttatatgat 26813949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 29168921 - 29168962
Alignment:
Q  69 ttttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||||| ||||| |||||||| ||||||||||||||    
T  29168921 ttttcataagttttccaatataacttaggaaaacagcttata 29168962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 44236834 - 44236887
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacag 104  Q
    |||||| ||||| ||| ||||||||||| ||||||| ||| |||||||||||||    
T  44236834 taagttattttcagcttattttcataagctctccaatatagcttatgaaaacag 44236887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 4281612 - 4281552
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaa-ataacttatgaaaaca 103  Q
    |||||||||||||||||||  || |||||||||| ||||||||| | |||||| |||||||    
T  4281612 atgttcataagttgttttcatcttattttcataaattctccaaagacaacttaagaaaaca 4281552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 7514643 - 7514563
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||||||||| ||||| |  || |||||||  |||||| ||||||| |||||||||||||||| ||| || ||| ||||||    
T  7514643 tgttcataagctgtttccaactaattttcactagttctgcaaaatagcttatgaaaacagcttgtagcttatatgaaaaca 7514563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 26215483 - 26215427
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttat 180  Q
    ||||||| |||||||||||| ||||||| |||||||| ||||| ||||||| |||||    
T  26215483 atagtttaactttattttatcttttgttatagaaatagcttatacataagcgcttat 26215427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 182
Target Start/End: Original strand, 39866738 - 39866878
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataact--tatgaaaacagcttatagtttgtataaaaacatagtttt-actttatt 140  Q
    |||| |||||| ||||||| | | ||||||||||| ||| ||| ||| ||  ||||||||||  ||||||||| ||| |||||  |||||| ||||||||    
T  39866738 atgtccataagctgttttcagtttattttcataagctcttcaagatagcttatatgaaaacaatttatagtttttatgaaaac--agttttgactttatt 39866835  T
Q  141 ttat-ttttgttgtagaaataacttattcataagcacttatat 182  Q
    |||| ||||||| |||| ||| ||| | |||||||| ||||||    
T  39866836 ttatcttttgttatagagatagcttgtgcataagcatttatat 39866878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 147 - 223
Target Start/End: Original strand, 43208239 - 43208315
Alignment:
Q  147 ttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttat 223  Q
    ||||| |||||||| ||||| |||||  ||||||||||| |  ||||||| ||||||||   |||||||||||||||    
T  43208239 ttgttatagaaatagcttatacataaatacttatatgatgaacgtttatactataagcacttaattaagttgtttat 43208315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 43 - 224
Target Start/End: Complemental strand, 17884135 - 17883954
Alignment:
Q  43 tatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttt 142  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||| ||| |||||||||||| || |||  || || ||||||  | ||| ||||||||||    
T  17884135 tatgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaac--aatttaactttatttt 17884038  T
Q  143 at-ttttgttgtagaaataacttattcataagcactta-tatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    || ||||||| |||||||| ||||  ||| ||||||||  ||||| |||  ||||  |||||||  ||||||||||||||||||    
T  17884037 atcttttgttatagaaatagcttacacatgagcacttaccatgataagtccttatgctataagctaaaaattaagttgtttatc 17883954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 7694014 - 7694095
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||||||||||||||| ||| |||| |||||  ||||||  |||||||||||||||||||||||| || || |||||||    
T  7694014 atgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaaca 7694095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 18628555 - 18628628
Alignment:
Q  52 aagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||||||| ||| |||| |||||| ||||||| ||||||||||||||||| |||||  || ||||||||||    
T  18628555 aagttgttttcagcttatttccataagctctccaagataacttatgaaaacagtttataacttatataaaaaca 18628628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 233
Target Start/End: Complemental strand, 19304871 - 19304806
Alignment:
Q  168 cataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatctaaataggt 233  Q
    |||||||||||||||||  || |||||||  ||||||||  |||||||||||||||||||||||||    
T  19304871 cataagcacttatatgagaagcgtttatagcataagcatttaattaagttgtttatctaaataggt 19304806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 20031801 - 20031748
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||| |||||||||||||||||||| |||||| ||||||||||| ||||||||    
T  20031801 ttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatag 20031748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 30024683 - 30024626
Alignment:
Q  129 ttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||    
T  30024683 ttttactttattttatcttttgttatagaaataacttatgcataagtacttatatgat 30024626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 42685490 - 42685409
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||| |||||||||||| |||| ||||||| | ||||||||||||| |||||||||||| |||| || || || |||||||    
T  42685490 atgtttataagttgtttttggcttattttcacacgttctccaaaatagcttatgaaaacaacttagagcttataaaaaaaca 42685409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 125
Target Start/End: Original strand, 50004160 - 50004229
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||| ||| ||||||||||||||||||| |||||||| |||||||||| || |||| ||| ||||||    
T  50004160 tgttttcagcttattttcataagttctccaagataacttaggaaaacagctcattgtttatatgaaaaca 50004229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 82 - 204
Target Start/End: Complemental strand, 24444066 - 24443945
Alignment:
Q  82 tccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttat 180  Q
    |||| |||| |||||||||||| ||||||| || ||| ||||  | |||| | |||||||||| |||||||||||||||  ||||| |||||| ||||||    
T  24444066 tccacaatagcttatgaaaacaacttatagcttatatgaaaa--ttgtttgaatttattttatattttgttgtagaaatcgcttatacataagaacttat 24443969  T
Q  181 atgattagtgtttatattataagc 204  Q
    ||||| |||| ||||  |||||||    
T  24443968 atgataagtgcttatgctataagc 24443945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 53673660 - 53673728
Alignment:
Q  42 atatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||| |||||||||||||| ||| |||| |||||| ||||||| ||| ||||||||||||| |||||    
T  53673660 atatgtccataagttgttttcagcttatttacataagctctccaagatagcttatgaaaacagtttata 53673728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 166
Target Start/End: Original strand, 33534178 - 33534294
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttt 147  Q
    |||||||||||||| ||| ||||||||||| |||| ||||||| ||| ||||||| ||| ||| || |||| ||||   |||| | |||||||||| |||    
T  33534178 cataagttgttttcagcttattttcataagctctcaaaaataatttacgaaaacaacttgtagattatatagaaac--ggtttgattttattttatcttt 33534275  T
Q  148 tgttgtagaaataacttat 166  Q
    | |||||||| ||||||||    
T  33534276 tattgtagaactaacttat 33534294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 52315204 - 52315267
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||| |||| ||| ||||||||||||| ||||||||| |||||| ||||| ||||||    
T  52315204 ttcataagttgctttcagcttattttcataagttttccaaaatagcttatggaaacaacttata 52315267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 825506 - 825552
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaac 102  Q
    ||||||| ||| ||||||||||||||||||||||| |||||||||||    
T  825506 tgttttcagcttattttcataagttctccaaaatagcttatgaaaac 825552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 23819167 - 23819016
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttt 131  Q
    ||||||| ||| |||| ||||||||||||||  || ||||  ||||| ||| ||| ||| ||||||||||||  |||||  || ||| ||||||  ||||    
T  23819167 acagcttatgacatgtccataagttgttttcatcttatttctataagctcttcaagatagcttatgaaaacatgttataacttatatgaaaaca--gttt 23819070  T
Q  132 tactttattttatttttgttgtagaaataacttattcataagcacttatatgat 185  Q
     |||  ||||||| |||||| | |||||||||||| ||||| ||||| ||||||    
T  23819069 gactacattttatatttgttatggaaataacttatacataaacacttgtatgat 23819016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 49219200 - 49219065
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttt 147  Q
    |||||||||||||| ||| |||| |||||  |||  || |||  ||||||||||| ||||||| || ||| ||||  || ||| |||||||||||| |||    
T  49219200 cataagttgttttcagcttatttccataatctctttaagatagtttatgaaaacaacttatagcttatatgaaaa--taatttgactttattttatattt 49219103  T
Q  148 tgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||| |||||||||||||| | ||| |||| |||||||    
T  49219102 tgttatagaaataacttatacctaaccactcatatgat 49219065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 3155657 - 3155543
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgta 154  Q
    ||||||| ||| |||||||| |||||| ||| |||  ||||||||||||||| ||| ||||| ||||||  | ||| |||||||||||| ||||| | ||    
T  3155657 tgttttcagcttattttcattagttcttcaagatagtttatgaaaacagcttgtagcttgtacaaaaac--aatttaactttattttatcttttgctata 3155560  T
Q  155 gaaataacttattcata 171  Q
    |||||| ||||| ||||    
T  3155559 gaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 29263448 - 29263371
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    ||||||| ||||||||||||||||||||||| ||| |||| || ||| ||| ||  ||| |||||||||||| |||||    
T  29263448 acagcttatgatatgttcataagttgttttcagcttatttccacaagctctgcaggatagcttatgaaaacaacttat 29263371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 30207582 - 30207719
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttattttt-g 149  Q
    |||| ||||||| ||| |||| |||||  |||| ||  || |||||||||||| ||||||| || ||| ||||||  |||| | |||||||||||||| |    
T  30207582 taagctgttttcagcttatttccataatctctctaaggtagcttatgaaaacaacttatagcttatatgaaaaca--gtttga-tttattttattttttg 30207678  T
Q  150 ttgtagaaataacttattcataagcacttatatgattagtg 190  Q
    || ||||| |||| ||| |||||||||||||||||| ||||    
T  30207679 ttatagaactaacatatacataagcacttatatgataagtg 30207719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 17822872 - 17822936
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| | ||||  ||| ||||||||||||||||||| ||| |||||||||||| |||||||    
T  17822872 ttcataagctttttttagcttattttcataagttctccaagatagcttatgaaaacaacttatag 17822936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 224
Target Start/End: Complemental strand, 24193572 - 24193472
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttat 223  Q
    ||||||| ||| | |||||| |||||||||| ||||||||||| |||||| ||||||||||| || ||||||  ||||||     |||||||||||||||    
T  24193572 atagtttaactctgttttatattttgttgtaaaaataacttatacataagtacttatatgataagcgtttatgctataagtgctcaattaagttgtttat 24193473  T
Q  224 c 224  Q
    |    
T  24193472 c 24193472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 195
Target Start/End: Complemental strand, 44319991 - 44319866
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttttgttgtagaaataacttatt 167  Q
    |||||||||||||||| |  ||| ||||| |||| ||||| ||| || ||| ||||||  |||  |||||||||||| ||| || ||||||||  ||||     
T  44319991 attttcataagttctctaggatagcttatcaaaatagcttgtagcttatatgaaaaca--gttcgactttattttatcttttttatagaaatagtttata 44319894  T
Q  168 cataagcacttatatgattagtgtttat 195  Q
    ||| |||||||||||||| |||| ||||    
T  44319893 catgagcacttatatgataagtgcttat 44319866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Complemental strand, 47800691 - 47800623
Alignment:
Q  42 atatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| |||||  |||||| ||| ||||||||||| ||| ||| ||| |||||||||||||||||||    
T  47800691 atatgtttataagcggttttcagcttattttcataagctcttcaagatagcttatgaaaacagcttata 47800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 47970305 - 47970245
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatga 184  Q
    ||||||| |||| ||||||| ||||||| |||||||| ||||| |||||||||||||||||    
T  47970305 atagtttgacttcattttatcttttgttatagaaatagcttatacataagcacttatatga 47970245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 194
Target Start/End: Original strand, 54325037 - 54325190
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttat 139  Q
    |||||||| |||||| ||||||| | | || | |||||  ||||||  ||| ||| |||||| ||||||||| || ||| ||||||  |||| |||||||    
T  54325037 tgatatgtccataagctgttttcagtttatctccataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaaca--gtttgactttat 54325134  T
Q  140 tttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgttta 194  Q
    ||||| ||||||  ||||||||  |||| || ||||||||||||||| ||| ||||    
T  54325135 tttatcttttgtaatagaaatagtttatacacaagcacttatatgataagtattta 54325190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 55414427 - 55414483
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    |||||||| | |||||  || ||||||||||||||||||| ||||||||||||||||    
T  55414427 ttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaaca 55414483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 103
Target Start/End: Complemental strand, 8469014 - 8468955
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    |||| |||||||||||||| | | ||||||||||| |||| | |||||||||||||||||    
T  8469014 atgtccataagttgttttcagattattttcataagctctctagaataacttatgaaaaca 8468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 16200009 - 16200052
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||    
T  16200009 attttcataagtcctccaagatagcttatgaaaacagcttatag 16200052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 182
Target Start/End: Complemental strand, 28623281 - 28623218
Alignment:
Q  120 aaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatat 182  Q
    |||||| ||||| || ||||||||| ||||||| || ||||||||||| |||||||||||||||    
T  28623281 aaaacacagtttaacattattttatcttttgttatataaataacttatacataagcacttatat 28623218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 43932501 - 43932434
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||| ||||||||||||||  || ||||||| ||||||| || ||||||||||||||| || ||||||    
T  43932501 atgtccataagttgttttcatcttattttcacaagttcttcagaataacttatgaaaatagtttatag 43932434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 46860327 - 46860276
Alignment:
Q  153 tagaaataacttattcataagcacttatatgattagtgtttatattataagc 204  Q
    |||||||| ||||||||||||||||||||| || |||||||||  |||||||    
T  46860327 tagaaatatcttattcataagcacttatatcataagtgtttatgctataagc 46860276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 133 - 224
Target Start/End: Complemental strand, 54986400 - 54986309
Alignment:
Q  133 actttattttatttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    ||||||| ||||||||||| |||||||| ||||| |||||  |||||||||||| | ||||||  ||||| | |  | ||||||||||||||    
T  54986400 actttatcttatttttgttatagaaatagcttatacataaaaacttatatgattggcgtttatgctataaacttttatttaagttgtttatc 54986309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 181
Target Start/End: Original strand, 4663770 - 4663836
Alignment:
Q  116 tataaaaacatagttttactttattttatt-tttgttgtagaaataacttattcataagcacttata 181  Q
    |||| ||| |||||||  ||| |||||||| |||||| |||||||||||||| ||||||||||||||    
T  4663770 tatataaaaatagtttggcttcattttattctttgttatagaaataacttatacataagcacttata 4663836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 185
Target Start/End: Complemental strand, 19422402 - 19422344
Alignment:
Q  128 gttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||| |||||||| ||| ||||||| |||||||||||||| |||||||| |||||||||    
T  19422402 gtttgactttattatatcttttgttatagaaataacttatacataagcatttatatgat 19422344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 224
Target Start/End: Complemental strand, 24929559 - 24929380
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    |||||||||| |||||||| ||| |||| |||||| |||| |  | |  ||||||||||| ||||||| || ||| |||||  ||||  |||||||||||    
T  24929559 atgttcataaattgttttcagcttatttccataagctctctagtagagtttatgaaaacaacttatagcttttatgaaaac--agttagactttatttta 24929462  T
Q  144 t-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    | ||||||| ||||||||  | || || || || ||||||||| || | |||| |||||| ||   ||||||||||||||||    
T  24929461 tcttttgttatagaaatagttcatacaaaaacaattatatgataagagattatgttataaacactcaattaagttgtttatc 24929380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 30066758 - 30066840
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    ||||||| | ||||||||||||  ||||||| |||  |||| ||||| ||||||| ||| ||||||| ||||||||| |||||    
T  30066758 acagcttataatatgttcataatctgttttcagcttgtttttataagctctccaagatagcttatgagaacagcttacagttt 30066840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 34398694 - 34398756
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||||||||| | || |||||| ||||||  ||  ||||||||||||||||||||    
T  34398694 cataagttgttttcggcttacttccataagctctccatgatggcttatgaaaacagcttatag 34398756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 43824349 - 43824283
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||||||||||| ||| |||| |||||| | ||||  |||||||| ||||| ||||||||    
T  43824349 atgttcataagttgttttcagcttatttccataagctttccaggataacttacgaaaaaagcttata 43824283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 49202710 - 49202644
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||||  || |||||||| |||| ||||| ||| |||| ||||||| |||||||    
T  49202710 tgttcataagttgttttcaacttattttcattagttatccaagatagcttacgaaaacaacttatag 49202644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 50298487 - 50298417
Alignment:
Q  155 gaaataacttattcataagcacttat-atgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    |||| ||||||| |||||||| |||| ||||| |||||||||  ||||||| | |||||||||||||||||    
T  50298487 gaaacaacttatacataagcatttatcatgataagtgtttatgctataagcttcaaattaagttgtttatc 50298417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 55302301 - 55302247
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagt 112  Q
    ||||| ||| ||||||||||||| ||||| ||| ||||||| |||||||||||||    
T  55302301 ttttcagcttattttcataagttttccaacatagcttatgataacagcttatagt 55302247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 2980574 - 2980615
Alignment:
Q  144 tttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||| |||||||| ||||| ||||||||||||||||||    
T  2980574 tttttgttatagaaatagcttatacataagcacttatatgat 2980615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Original strand, 8469381 - 8469438
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 101  Q
    ||||||||||||||||||| ||| |||| |||| |||||| | | |||||||||||||    
T  8469381 atgttcataagttgttttcagcttatttccataggttctctagactaacttatgaaaa 8469438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 110
Target Start/End: Original strand, 25548558 - 25548599
Alignment:
Q  69 ttttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||| ||| |||||||||||| |||||||||||||||||||    
T  25548558 ttttcgtaatttctccaaaatagcttatgaaaacagcttata 25548599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 181
Target Start/End: Original strand, 27671923 - 27671972
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttata 181  Q
    |||||||||||| ||||||||| |||||||||||| || |||||||||||    
T  27671923 actttattttatcttttgttgtggaaataacttatacacaagcacttata 27671972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 27721778 - 27721717
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||| ||||||| ||| ||||||  ||| ||||||  |||||||||||||||||||||||    
T  27721778 cataagctgttttcagcttattttcgcaagctctccaggataacttatgaaaacagcttata 27721717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 52746844 - 52746909
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    ||||||||||| ||||||| ||| |||||||||||   | ||| ||| ||||||||||||||||||    
T  52746844 atgttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttat 52746909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 108
Target Start/End: Original strand, 942136 - 942176
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagctta 108  Q
    ||||| |||||||||||| |||| |||||||||||||||||    
T  942136 atttttataagttctccataatagcttatgaaaacagctta 942176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 4191705 - 4191665
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  4191705 ttttgttatagaaatagcttatacataagcacttatatgat 4191665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 20109061 - 20109009
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||| |||||||||| |||||||| || ||| ||||| |||||||||||||    
T  20109061 ttttcgactcattttcaaaagttctctaatatatcttataaaaacagcttata 20109009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 194
Target Start/End: Original strand, 24160547 - 24160648
Alignment:
Q  92 cttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtg 190  Q
    |||||||||||| ||||||| ||  || ||||  |||||| | ||||| |||| ||||||| |||||| | |||||| ||||||||||||||||| || |    
T  24160547 cttatgaaaacaacttatagcttacatgaaaa--tagtttgaatttatattatcttttgttatagaaaaagcttatttataagcacttatatgataagcg 24160644  T
Q  191 ttta 194  Q
    ||||    
T  24160645 ttta 24160648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 27616412 - 27616452
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||||||||||||| |||||||||||||  ||||||||    
T  27616412 ttttgttgtagaaataaattattcataagcatgtatatgat 27616452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 220
Target Start/End: Complemental strand, 36734880 - 36734784
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtt 220  Q
    ||||||| |||||||||||  ||||||| |||||| |  |||| |||||||||||||||||| |  || ||| |||||||| |  ||||||||||||    
T  36734880 atagtttgactttattttaccttttgttatagaaagagattatacataagcacttatatgataaaggtatatgttataagcttttaattaagttgtt 36734784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 41088367 - 41088311
Alignment:
Q  129 ttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatga 184  Q
    |||||||||||||||| |||||||||  |||||  |||| |||||||||||||||||    
T  41088367 ttttactttattttatcttttgttgtgaaaatagtttatacataagcacttatatga 41088311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 7e-21; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 47 - 181
Target Start/End: Complemental strand, 33234424 - 33234292
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttattt 146  Q
    ||||||| ||||||||  ||||||| |||||| ||| ||  |||||||| ||||| ||||||||| || ||||||||||  |||| |||| ||||||| |    
T  33234424 ttcataacttgttttcaactcatttacataagctcttcagcataacttacgaaaatagcttatagcttatataaaaaca--gtttgacttcattttatat 33234327  T
Q  147 ttgttgtagaaataacttattcataagcacttata 181  Q
    |||| ||||||||||||||| || |||||||||||    
T  33234326 ttgtcgtagaaataacttatacacaagcacttata 33234292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 185
Target Start/End: Complemental strand, 31694579 - 31694444
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttt 147  Q
    ||||||||||||||  || ||||||||||| ||| |||   | |||| || |||| |||||||||||||||||||||  |||| |||||| ||||| |||    
T  31694579 cataagttgttttcaacttattttcataagctctacaagtgagcttaagagaacaacttatagtttgtataaaaaca--gtttgactttagtttatgttt 31694482  T
Q  148 tgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||| |||| ||| ||||||||||||||||||||||||    
T  31694481 tgttatagacatagcttattcataagcacttatatgat 31694444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 45 - 180
Target Start/End: Original strand, 9202753 - 9202887
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat 144  Q
    |||||||||| ||||| | ||| ||||||||||||||| ||| |||||||||||||||||||||| | || ||| |||||  | ||| ||||||||||||    
T  9202753 tgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaac--aatttaactttattttat 9202850  T
Q  145 -ttttgttgtagaaataacttattcataagcacttat 180  Q
     ||||| |  ||||||| |||||  ||||||||||||    
T  9202851 cttttgctacagaaatagcttatatataagcacttat 9202887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 50 - 186
Target Start/End: Original strand, 18704046 - 18704180
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttttg 149  Q
    ||||||||||||| ||| |||| |||||| |||    |||| |||||||||||| ||||||| || ||||||||  ||| || |||||||||   |||||    
T  18704046 ataagttgttttcagcttatttccataagatctttgtaatagcttatgaaaacaacttatagcttatataaaaa--tagcttgactttatttatcttttg 18704143  T
Q  150 ttgtagaaataacttattcataagcacttatatgatt 186  Q
    || |||||||||||||| |||||| ||||||||||||    
T  18704144 ttatagaaataacttatacataagaacttatatgatt 18704180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 109
Target Start/End: Original strand, 4014429 - 4014493
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    |||||||||| ||||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttat 4014493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 13604841 - 13604935
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacat 126  Q
    ||||||| ||| |||| |||| |||||||||  || ||||||||||| ||| ||| ||||||||||||||||||||| ||||| ||| |||||||    
T  13604841 acagcttatgacatgtccatacgttgttttcaacttattttcataagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaacat 13604935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 41957443 - 41957521
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||| |||| ||||||||||||||  || |||||||||||||||| |  ||| |||||||||||||||||||    
T  41957443 acagcttatgacatgtccataagttgttttcatcttattttcataagttctcaaggatagcttatgaaaacagcttata 41957521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 49 - 110
Target Start/End: Original strand, 7319017 - 7319078
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||| || ||| ||||||||||||||||||| ||| ||||||||||||| |||||    
T  7319017 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagtttata 7319078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 111
Target Start/End: Complemental strand, 12425631 - 12425570
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||||  || ||||||||||||||||||| ||| ||| ||||||||||||||||    
T  12425631 ataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatag 12425570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 37588364 - 37588444
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaac 124  Q
    ||||| ||||| ||||||| ||| |||| |||||| |||||| ||||||||||||||||| ||||||| || ||| |||||    
T  37588364 atgttaataagctgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaac 37588444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 912995 - 913050
Alignment:
Q  169 ataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    ||||| ||||||||||| |||||||||| |||||||||  ||||||||||||||||    
T  912995 ataagtacttatatgataagtgtttatagtataagcatttaattaagttgtttatc 913050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 15402829 - 15402900
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||||||||| ||| ||||  ||| |||||| ||||||  ||||||||||| |||||||    
T  15402829 tgatatgttcataagttgttttcagctaatttctatacgttctctaaaataggttatgaaaacaacttatag 15402900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 221
Target Start/End: Original strand, 27104527 - 27104594
Alignment:
Q  154 agaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgttt 221  Q
    ||||||||||||| | |||||||||||||||| |||||||||  ||||||| | ||||| ||||||||    
T  27104527 agaaataacttatacgtaagcacttatatgataagtgtttatgctataagcgttaaattgagttgttt 27104594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 93 - 195
Target Start/End: Original strand, 32059642 - 32059742
Alignment:
Q  93 ttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttttgttgtagaaataacttattcataagcacttatatgattagtgtt 192  Q
    ||||||||||||||||||| || ||| ||||||  |||| |||||||||||| || |||  | ||| | ||||| |||||||||||||||||| ||| ||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaaca--gtttgactttattttatcttagttacaaaaacagcttatacataagcacttatatgataagtatt 32059739  T
Q  193 tat 195  Q
    |||    
T  32059740 tat 32059742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 41981872 - 41981951
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacat 126  Q
    |||||||| || |||  ||| |||||| ||||||||| ||||||  |||||||||||||||||||||| || ||||||||    
T  41981872 ttcataagctgcttttagcttattttcgtaagttctcaaaaatagtttatgaaaacagcttatagtttatacaaaaacat 41981951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 11707121 - 11707055
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||| ||||||||||||| ||| ||||||| ||| ||| ||| ||| |||||||||||||||||||    
T  11707121 atgtttataagttgttttcagcttattttcaaaagctctacaagatagcttatgaaaacagcttata 11707055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 21768189 - 21768283
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacat 126  Q
    ||||||| ||| |||| |||| | |||||||  || |||||| |||| ||| ||| ||||||||||||||||||||| ||||| ||| |||||||    
T  21768189 acagcttatgacatgtccatacgctgttttcaacttattttcgtaagctcttcaagataacttatgaaaacagcttaaagtttatatgaaaacat 21768283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 135 - 224
Target Start/End: Complemental strand, 26516275 - 26516185
Alignment:
Q  135 tttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    |||||||||| ||||||| |||||||| ||||| |||||||||||||||||| || | ||||  |||||||    ||||||||||||||||    
T  26516275 tttattttatcttttgttttagaaatagcttatacataagcacttatatgataagcgcttatgctataagcgcttaattaagttgtttatc 26516185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 28413288 - 28413358
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    ||||||||||| ||||||| ||| |||| |||||  ||||||| |||||||||||| ||||| ||||||||    
T  28413288 atgttcataagctgttttcagcttatttccataaactctccaagataacttatgaacacagcgtatagttt 28413358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 111
Target Start/End: Complemental strand, 32942659 - 32942617
Alignment:
Q  69 ttttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  32942659 ttttcataagttctccaagatagcttatgaaaacagcttatag 32942617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 111
Target Start/End: Complemental strand, 39105529 - 39105463
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||| | ||||  ||| ||||||||||||||||||| ||| ||||||||||||| ||||||    
T  39105529 tgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatag 39105463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 1550952 - 1550830
Alignment:
Q  55 ttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttttgttgta 154  Q
    ||||||||  || ||| ||||||| ||| ||  |||||||||||||||||||||||| |||||||||| |  | ||| | ||| || |  |||| |||||    
T  1550952 ttgttttcatcttattgtcataagctcttcagtataacttatgaaaacagcttatagcttgtataaaagc--aatttaaatttgttcttcttttcttgta 1550855  T
Q  155 gaaataacttattcataagcactta 179  Q
    ||| |||||||| ||||||||||||    
T  1550854 gaattaacttatacataagcactta 1550830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 3977386 - 3977309
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    ||||||| ||| |||||| | || ||| ||| ||| |||||||||| ||||||| || ||||||||||||||||||||    
T  3977386 acagcttatgacatgttccttagctgtcttcagcttattttcataatttctccacaacaacttatgaaaacagcttat 3977309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 14182386 - 14182450
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||| ||||||||  || ||||||||||||||| ||  |||||||||||||||||||||||    
T  14182386 tgttcataaattgttttcaacttattttcataagttct-caggataacttatgaaaacagcttata 14182450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 34 - 142
Target Start/End: Original strand, 17258877 - 17258983
Alignment:
Q  34 agcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagtttta 133  Q
    ||||| ||| ||||||||||| ||||||| ||| ||||||||||| ||| ||  |||  ||||||||||||||||| | |||||  |||  ||||||| |    
T  17258877 agcttatgacatgttcataagctgttttcagcttattttcataagctcttcaggatagtttatgaaaacagcttattgattgtacgaaa--atagtttga 17258974  T
Q  134 ctttatttt 142  Q
    |||||||||    
T  17258975 ctttatttt 17258983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 34160796 - 34160731
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||  ||||||| ||| ||||||||||||||||||| ||| || ||||||| ||||||||    
T  34160796 tgttcataaactgttttcagcttattttcataagttctccaagatatctaatgaaaatagcttata 34160731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 51 - 108
Target Start/End: Complemental strand, 39594866 - 39594809
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagctta 108  Q
    |||||||||||| ||| ||||||||||||||  ||| ||| |||||||||||||||||    
T  39594866 taagttgttttcagcttattttcataagttcaacaagatatcttatgaaaacagctta 39594809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Complemental strand, 40848810 - 40848769
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaa 86  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  40848810 tgttcataagttgttttcgccttattttcataagttctccaa 40848769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 110
Target Start/End: Original strand, 1636771 - 1636838
Alignment:
Q  42 atatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||| ||||||||| ||| ||   |||||||| ||||| |||||||||||||||||||||||    
T  1636771 atatgttcatacgttgttttcagcttatag-cataagttttccaagataacttatgaaaacagcttata 1636838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 187
Target Start/End: Original strand, 7096213 - 7096273
Alignment:
Q  128 gttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgatta 187  Q
    |||| |||||||||||| ||||||| |||||||| ||||| ||||||||||| ||||||||    
T  7096213 gtttgactttattttatcttttgttatagaaatagcttatacataagcacttgtatgatta 7096273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 204
Target Start/End: Original strand, 29115304 - 29115376
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagc 204  Q
    |||||||||||  |||||||||||||||| ||||| ||||||||||| |||||| | |||||||  |||||||    
T  29115304 actttattttaccttttgttgtagaaatagcttatacataagcacttttatgataaatgtttatgctataagc 29115376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 180
Target Start/End: Original strand, 36796712 - 36796845
Alignment:
Q  46 gttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatt 145  Q
    ||||||||| ||||||| | | |||||  |||||| ||||| ||| |  ||||||||||||||||| || | | ||||  || ||| || ||||||||||    
T  36796712 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaaacagcttatagcttatgtgaaaa--taatttaaccttattttatt 36796809  T
Q  146 ttt-gttgtagaaataacttattcataagcacttat 180  Q
    ||| |||| ||||||||||||| |||| ||||||||    
T  36796810 ttttgttgcagaaataacttatacatatgcacttat 36796845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 37526203 - 37526283
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaac 124  Q
    ||||| ||||| ||||||| ||| |||| |||||| |||||| || |||||||||||||| ||||||| || ||| |||||    
T  37526203 atgttaataagctgttttcagcttatttccataagctctccagaacaacttatgaaaacaacttatagcttatatgaaaac 37526283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 912663 - 912793
Alignment:
Q  56 tgttttcggctcattttc-ataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttt-tgttgt 153  Q
    ||||||| ||| |||||| ||||| | ||||| |||  |||| |||||| ||||| | || ||| |||||| | ||| |||||||||||| || |||| |    
T  912663 tgttttcagcttattttccataagctttccaagatagtttataaaaacaacttattgcttatatgaaaaca-attttgactttattttatattgtgttat 912761  T
Q  154 agaaataacttattcataagcacttatatgat 185  Q
    ||||||||||||||||||| | ||||||||||    
T  912762 agaaataacttattcataaacgcttatatgat 912793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 6587099 - 6587178
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| ||| | ||||||||| ||||| | ||| ||||||| ||||||||||  ||| |||||||||||| |||||||    
T  6587099 acagcttatgacaggttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatag 6587178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 7319466 - 7319391
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||||||| |||| ||| ||||| ||||||||||||| ||| |||| |||||||| |||||| || ||| ||||||    
T  7319466 ataagttgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaaca 7319391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 184
Target Start/End: Complemental strand, 16863846 - 16863708
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    |||||| |||||||||||| ||| ||||||| |||||  |||  |||||| ||||||||||||||||  |||||| ||| ||    || | ||||||| |    
T  16863846 atgttcttaagttgttttcagcttattttcacaagttaaccatgataactgatgaaaacagcttataacttgtatgaaacca---gttgagtttatttaa 16863750  T
Q  144 t-ttttgttgtagaaataacttattcataagcacttatatga 184  Q
    | ||||||| || ||||| ||||  |||||||||||||||||    
T  16863749 tcttttgttataaaaatagcttacgcataagcacttatatga 16863708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 175
Target Start/End: Complemental strand, 16889795 - 16889671
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-tttt 148  Q
    ||||||||||||| | | |||| |||||  |||| |  ||| |||||||||||||||||||| || |||||||||  ||||| |||| | ||||| ||||    
T  16889795 ataagttgttttcagattatttccataaactctctagcatagcttatgaaaacagcttatagcttctataaaaac--agtttgacttaagtttatctttt 16889698  T
Q  149 gttgtagaaataacttattcataagca 175  Q
    ||| | |||||| ||||| ||||||||    
T  16889697 gttatggaaatagcttatacataagca 16889671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 28777035 - 28776992
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| |||||||||| ||| ||||||||||||||||||||    
T  28777035 attttcattagttctccaagatagcttatgaaaacagcttatag 28776992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 183
Target Start/End: Original strand, 35135745 - 35135804
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatg 183  Q
    ||||||| |||||||||||| ||||||| |||||||| ||||| ||||| ||||||||||    
T  35135745 atagtttgactttattttatcttttgttatagaaatatcttatacataaacacttatatg 35135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 114
Target Start/End: Original strand, 12460005 - 12460075
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    ||||||||| |||||||| |||| ||||||||||| ||| ||| ||| ||| |||| ||| ||||||||||    
T  12460005 atgttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaagacaacttatagttt 12460075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 160
Target Start/End: Complemental strand, 14295584 - 14295457
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttt 131  Q
    ||||||| ||||||||  ||||| ||||||| ||| | ||  | ||| ||||||  ||| |||| ||||||||||||||| || ||| |||||  |||||    
T  14295584 acagcttatgatatgtcgataagctgttttcagcttacttctaaaagctctccaggatagcttacgaaaacagcttatagcttatatgaaaac--agttt 14295487  T
Q  132 tactttattttat-ttttgttgtagaaata 160  Q
     |||||||||||| ||||||| ||||||||    
T  14295486 gactttattttatcttttgttatagaaata 14295457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 141
Target Start/End: Original strand, 18543192 - 18543296
Alignment:
Q  35 gcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttac 134  Q
    |||| ||| |||| ||| |||||||||| ||| |||| |||||| ||||||  ||| |||||||||||| ||||||  || |||||||||| ||||| ||    
T  18543192 gcttatgacatgtccatgagttgttttcagcttattt-cataagctctccaggatagcttatgaaaacaacttatatcttatataaaaaca-agtttgac 18543289  T
Q  135 tttattt 141  Q
    |||||||    
T  18543290 tttattt 18543296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 42582978 - 42582912
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||  ||||||  ||| ||||||||||||||||||| ||| ||||  |||||||||||||    
T  42582978 atgttcataaactgttttgagcttattttcataagttctccaatatagcttacaaaaacagcttata 42582912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 8177524 - 8177577
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctcca 85  Q
    ||||||| |||||||| |||||||||||||| | | ||||||||||| ||||||    
T  8177524 acagcttatgatatgtccataagttgttttcaggttattttcataagctctcca 8177577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 12521603 - 12521542
Alignment:
Q  35 gcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttat 96  Q
    |||| ||||||||||||||| ||||||| ||| |||| |||||| ||| ||||||| |||||    
T  12521603 gcttatgatatgttcataagctgttttcagcttatttccataagctcttcaaaatagcttat 12521542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 185
Target Start/End: Complemental strand, 19177499 - 19177405
Alignment:
Q  90 aacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttt-tgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||| ||||||| ||||||| || ||| ||||||  |||  |||| ||||||| || |||||||||||||  |||| ||||||||||||||||||    
T  19177499 aacttacgaaaacaacttatagcttatatgaaaaca--gttagacttaattttatcttctgttgtagaaatagtttatacataagcacttatatgat 19177405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 20982226 - 20982279
Alignment:
Q  133 actttattttatt-tttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||||||||  |||||| |||||||| ||||| ||||||||||||||||||    
T  20982226 actttattttatcctttgttatagaaatagcttatacataagcacttatatgat 20982279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Complemental strand, 29588856 - 29588787
Alignment:
Q  136 ttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagc 204  Q
    ||||||||| ||||||| |||||||| ||||| ||||||||||||||| |  |||||||||  |||||||    
T  29588856 ttattttatattttgttatagaaatagcttatacataagcacttatataaaaagtgtttatgctataagc 29588787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 36639583 - 36639506
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacat 126  Q
    ||||||||||||||  || ||||||||||| ||| ||| ||| |||||||||||||  ||||  |||||| |||||||    
T  36639583 cataagttgttttcctcttattttcataagctcttcaagatagcttatgaaaacagtctataacttgtatgaaaacat 36639506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 37690640 - 37690721
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataactt-atgaaaacagcttatagtttgtataaaaac 124  Q
    ||||| ||||| ||||||| ||| |||| |||||| |||||| |||||||| ||||||||| ||||||| || ||| |||||    
T  37690640 atgttaataagctgttttcagcttatttccataagctctccataataactttatgaaaacaacttatagcttatatgaaaac 37690721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 96
Target Start/End: Complemental strand, 1899232 - 1899168
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttat 96  Q
    ||||||| ||| |||| |||||||||||||| ||| |||| ||||| |||||||  |||||||||    
T  1899232 acagcttatgacatgtgcataagttgttttcagcttatttccataaattctccagtataacttat 1899168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 10272442 - 10272502
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||| ||| ||||||||||  ||||||| ||  |||||||||||| |||||||    
T  10272442 taagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatag 10272502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 195
Target Start/End: Complemental strand, 10391329 - 10391269
Alignment:
Q  136 ttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttat 195  Q
    ||||||||| ||||||| || ||||| ||||| | |||||||||||||||| |||||||||    
T  10391329 ttattttatcttttgttataaaaatagcttatacgtaagcacttatatgataagtgtttat 10391269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 33533546 - 33533610
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||  || |||| |||||| ||||||| ||| ||| |||||||| |||||||    
T  33533546 ttcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatag 33533610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 184
Target Start/End: Original strand, 37063157 - 37063217
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatga 184  Q
    ||||||| |||||||||||| ||||||| ||||||||  |||| |||||||| ||||||||    
T  37063157 atagtttgactttattttatcttttgttatagaaatagtttatacataagcatttatatga 37063217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 37489411 - 37489451
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||||||| ||||||||||||||| || |||||||||    
T  37489411 ttttgttgtagagataacttattcataaacagttatatgat 37489451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 180
Target Start/End: Original strand, 40048371 - 40048419
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttat 180  Q
    |||||||||||| ||||||| |||||| ||||||| |||||||||||||    
T  40048371 actttattttatcttttgttatagaaacaacttatacataagcacttat 40048419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 7e-18; HSPs: 67)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 10199402 - 10199533
Alignment:
Q  34 agcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagtttta 133  Q
    ||||| ||| ||||||||||||||||||| ||| ||||||||||| |||| |||||| |||||||||| ||||||| | |  ||||  || ||||||| |    
T  10199402 agcttatgacatgttcataagttgttttcagcttattttcataagctctctaaaatagcttatgaaaaaagcttatcgat--tatacgaaaatagtttga 10199499  T
Q  134 ctttattttat-ttttgttgtagaaataacttat 166  Q
    ||||||||||| ||  ||| ||||||||||||||    
T  10199500 ctttattttatcttgggttatagaaataacttat 10199533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 111
Target Start/End: Complemental strand, 34290312 - 34290235
Alignment:
Q  34 agcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||| ||| || |||||||||||||||| ||| ||||||||||||||| ||| ||| ||||||||||||||||||||    
T  34290312 agcttatgacatattcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatag 34290235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 35179200 - 35179139
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||| ||||||| ||| |||||||||||||||||| ||||||||||||||||||||||||    
T  35179200 cataagctgttttcagcttattttcataagttctccataataacttatgaaaacagcttata 35179139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 7137005 - 7137069
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||| ||||| ||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  7137005 ttcataagttattttcagcttattttcataagttctccaagatagcttatgaaaacagcttatag 7137069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 71 - 180
Target Start/End: Original strand, 33527178 - 33527286
Alignment:
Q  71 ttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattca 169  Q
    |||||||| |||| |  |||||||||||||||||||||||| || ||| |||||  ||||| ||| |||||||| ||||||| |||||||| ||||||||    
T  33527178 ttcataagatctcgaggataacttatgaaaacagcttatagattatatgaaaac--agtttgactgtattttatcttttgttttagaaatagcttattca 33527275  T
Q  170 taagcacttat 180  Q
    ||||| |||||    
T  33527276 taagcgcttat 33527286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 190
Target Start/End: Original strand, 41638308 - 41638459
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttat 139  Q
    ||||||| ||| |||||||||| |||||| || |||||| || | || ||| ||| |||||| |||||||| ||| ||| ||||  |||| | |||||||    
T  41638308 tgatatgctcaaaagttgtttttggctcacttccataagctcacaaagatagcttttgaaaatagcttatactttatatgaaaatttagtatgactttat 41638407  T
Q  140 tttat-ttttgttgtagaaataacttattcataagcacttatatgattagtg 190  Q
    ||||| || |||| || |||||| |||| |||||||||||||||||| ||||    
T  41638408 tttatcttgtgttctataaataaattatacataagcacttatatgataagtg 41638459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 40 - 185
Target Start/End: Complemental strand, 52286748 - 52286604
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttat 139  Q
    |||||||| |||||| | ||||  ||| |||| |||||  ||| ||| || ||||||||||| || |||||| || ||| ||||  | |||| |||||||    
T  52286748 tgatatgtccataagctatttttagcttatttccataaactcttcaagatgacttatgaaaatagtttatagcttatatgaaaa--ttgtttaactttat 52286651  T
Q  140 tttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||| |||||||||||||||| ||||||||||||| ||||||||||    
T  52286650 tttatcttttgttgtagaaatatcttattcataagcgcttatatgat 52286604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 14629966 - 14630037
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||||||||| ||| |||| |||||  ||||||| ||| |||||||||| |||||||||    
T  14629966 tgatatgttcataagttgttttcagcttatttccataaagtctccaagatagcttatgaaaatagcttatag 14630037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 195
Target Start/End: Complemental strand, 49125801 - 49125750
Alignment:
Q  144 tttttgttgtagaaataacttattcataagcacttatatgattagtgtttat 195  Q
    |||||||||||||||||||||||||||||| ||||||||||| || ||||||    
T  49125801 tttttgttgtagaaataacttattcataagaacttatatgataagcgtttat 49125750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 6292571 - 6292493
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||| ||||||||||| ||||||| ||| ||||||||||| |||||||||||  ||| ||||| ||||||||    
T  6292571 acagcttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagtttacgaaaatagcttata 6292493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 31517744 - 31517859
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    ||||||||||| ||||||| ||| ||||||||||| ||||||| | |  ||||||| ||||||||||| || ||| ||| |  | ||| |||||||||||    
T  31517744 atgttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatgaaatc--aatttaactttatttta 31517841  T
Q  144 t-ttttgttgtagaaata 160  Q
    | ||||||||||||||||    
T  31517842 tcttttgttgtagaaata 31517859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 112
Target Start/End: Complemental strand, 6102233 - 6102152
Alignment:
Q  32 acagcttttgatat-gttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagt 112  Q
    ||||||| |||||| |||||||| |||||||| ||| |||| ||||| |||||| | ||| |||||||||||||||||||||    
T  6102233 acagcttatgatattgttcataaattgttttcagcttatttccataaattctcccagatagcttatgaaaacagcttatagt 6102152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 147 - 224
Target Start/End: Original strand, 14128577 - 14128654
Alignment:
Q  147 ttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    ||||| |||||||||||||   ||||||||||||||||| ||| |||||| |||||||||  | ||||||||||||||    
T  14128577 ttgttttagaaataacttacatataagcacttatatgataagtctttatactataagcatttatttaagttgtttatc 14128654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 2777955 - 2777891
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||  |||||| ||| |||||||||||||||||||  |||||||| ||||||||||||||    
T  2777955 ttcataagccgttttcagcttattttcataagttctccaagttaacttattaaaacagcttatag 2777891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 93 - 203
Target Start/End: Original strand, 30259540 - 30259649
Alignment:
Q  93 ttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgt 191  Q
    ||||| ||||||||||||| || ||| ||| ||  |||| |||||||||||| ||||||| |||||||| ||| | ||||||||||| |||||| |||||    
T  30259540 ttatgcaaacagcttatagcttatatcaaagca--gtttgactttattttatattttgttatagaaatagcttgtgcataagcacttctatgataagtgt 30259637  T
Q  192 ttatattataag 203  Q
     ||| |||||||    
T  30259638 gtatgttataag 30259649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 104
Target Start/End: Original strand, 38867831 - 38867895
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacag 104  Q
    |||||||| ||| |||||||||  ||| ||||||||||||||| ||| |||||||||||||||||    
T  38867831 tgatatgtccatcagttgtttttagcttattttcataagttcttcaagataacttatgaaaacag 38867895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 45107609 - 45107549
Alignment:
Q  125 atagttttactttattttatttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| |||||||||||||||| || |||||||| |||||  |||||||||||||||||    
T  45107609 atagtttgactttattttatttttcttatagaaatagcttatagataagcacttatatgat 45107549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 47 - 107
Target Start/End: Complemental strand, 45975753 - 45975693
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagctt 107  Q
    |||||||| ||||||| ||| |||||||||| |||||||| ||| ||||||||||||||||    
T  45975753 ttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagctt 45975693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 133 - 224
Target Start/End: Complemental strand, 49557120 - 49557028
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    |||||||||||| ||||||| |||||||||||||| ||  |||||||||||||| |||| |||  |||||||||   ||||||| ||||||||    
T  49557120 actttattttatcttttgttatagaaataacttatacagcagcacttatatgataagtgattacgttataagcacttaattaagctgtttatc 49557028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 4576871 - 4576792
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaa 123  Q
    ||||| ||||||||| ||| ||| ||||||||||||| | ||| ||| |||||||||||||||||||  ||||| |||||    
T  4576871 atgtttataagttgtgttcagcttattttcataagttattcaatatagcttatgaaaacagcttataacttgtacaaaaa 4576792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 5886989 - 5887064
Alignment:
Q  35 gcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||| ||| ||||||||||||||||||| ||| |||||| |||||||||||| ||  |||||  ||||||||||||    
T  5886989 gcttatgacatgttcataagttgttttcagcttattttcgtaagttctccaagatggcttatagaaacagcttata 5887064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 17269285 - 17269177
Alignment:
Q  75 taagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttt-atttttgttgtagaaataacttattcataag 173  Q
    |||| ||||||  ||| |||||||||||| ||||| | || ||| ||||||   ||| |||||||||| | ||||||| |||||||||||||| ||||||    
T  17269285 taagctctccaggatagcttatgaaaacaacttattgcttatatgaaaacaa--tttgactttattttcacttttgttctagaaataacttatacataag 17269188  T
Q  174 cacttatatga 184  Q
    |||||||||||    
T  17269187 cacttatatga 17269177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 144
Target Start/End: Complemental strand, 4548780 - 4548689
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat 144  Q
    |||||||||||  ||| ||||||  ||| ||||||| ||| ||||||||||||||||||   ||||||||||||  ||||| ||||||||||||    
T  4548780 taagttgtttttagcttattttctgaagctctccaagatagcttatgaaaacagcttatgacttgtataaaaac--agtttgactttattttat 4548689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 49 - 111
Target Start/End: Original strand, 26779934 - 26779996
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||  || ||||||||||||||| ||| ||| |||||||||||| |||||||    
T  26779934 cataagttgttttcaacttattttcataagttcttcaagatagcttatgaaaacaacttatag 26779996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 27140556 - 27140478
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||| |||| |||||||||||||| ||| |||| |||||| ||||||  ||| ||||| |||||||||||||    
T  27140556 acagcttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatagcttataaaaacagcttata 27140478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 47885114 - 47885152
Alignment:
Q  147 ttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  47885114 ttgttgtagaaataacttattcataagcaattatatgat 47885152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 1565527 - 1565620
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||| ||| |||| |||||| ||||||| ||| |||||||| || |||||||||||  ||| |||||||||||| | ||| || |||||||    
T  1565527 acagcttatgacatgtgcataagctgttttcagcttattttcatgagctctccaaaatagattaagaaaacagcttacactttatacaaaaaca 1565620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 3063361 - 3063442
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||| ||||| ||||||||| || ||||  ||| | ||||||||||||||| |||||||||||||| |||| ||| ||||||    
T  3063361 atgtgcataatttgttttcgccttatttatatacgctctccaaaataacttgtgaaaacagcttatggtttatatgaaaaca 3063442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 125
Target Start/End: Complemental strand, 7472365 - 7472296
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||| ||| ||||||||||| ||||||| ||| |||||| ||||||||||||| || || |||||||    
T  7472365 tgttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaaca 7472296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 103
Target Start/End: Original strand, 12564509 - 12564562
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    ||||||||||||| ||| |||| |||||||||||||| ||| ||||||||||||    
T  12564509 ataagttgttttcagcttatttccataagttctccaagatagcttatgaaaaca 12564562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 199
Target Start/End: Complemental strand, 16980787 - 16980738
Alignment:
Q  150 ttgtagaaataacttattcataagcacttatatgattagtgtttatatta 199  Q
    |||||||||| |||||| |||||||||||||||||| ||| |||||||||    
T  16980787 ttgtagaaatgacttatacataagcacttatatgataagtatttatatta 16980738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 28077068 - 28077133
Alignment:
Q  39 ttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacag 104  Q
    |||| ||||||||||||||||||| ||| ||||  ||||| |||| |||||| |||||||||||||    
T  28077068 ttgaaatgttcataagttgttttcagcttatttcaataagctctctaaaatagcttatgaaaacag 28077133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 38503470 - 38503511
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaa 86  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  38503470 tgttcataagttgttttcagcttattttcataagttctccaa 38503511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 3234022 - 3234086
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||| |||||  || ||||||||||||||||||| ||| ||||| |||||| |||||||    
T  3234022 ttcataagtttttttctacttattttcataagttctccaatatagcttataaaaacaacttatag 3234086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 51 - 111
Target Start/End: Complemental strand, 32113717 - 32113657
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||| ||||||| ||| ||||||||||  ||||||| ||||||||||||||||| ||||||    
T  32113717 taagctgttttcagcttattttcataaaatctccaacataacttatgaaaacagtttatag 32113657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 100
Target Start/End: Original strand, 37593688 - 37593744
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaa 100  Q
    ||||||||||| ||||||| ||| ||||||||||| ||| ||||||| |||||||||    
T  37593688 atgttcataagctgttttcagcttattttcataagctcttcaaaatagcttatgaaa 37593744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 42174918 - 42174854
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| ||||||   || ||||||||||||||||||| ||||||||| |||||| |||||||    
T  42174918 ttcataagctgtttttaacttattttcataagttctccaatataacttataaaaacaacttatag 42174854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 116 - 178
Target Start/End: Original strand, 4699686 - 4699749
Alignment:
Q  116 tataaaaacatagttttactttattttatttt-tgttgtagaaataacttattcataagcactt 178  Q
    |||| ||| ||||||| ||||||||| || || ||||||||||||| |||||||||||||||||    
T  4699686 tatacaaaaatagtttgactttatttaatcttgtgttgtagaaatagcttattcataagcactt 4699749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 10744367 - 10744300
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||| |||||||  || ||||| |||||||||| || | | ||||||||||||||||||||    
T  10744367 atgttcataagctgttttcatcttatttttataagttctctaagacagcttatgaaaacagcttatag 10744300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 16981940 - 16982080
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    |||| |||||||||||||  ||| ||||  ||||| ||||||  ||| ||||||| |||| |||| ||||| | ||||||||   ||  |||||||||||    
T  16981940 atgtccataagttgtttttagcttatttatataagctctccatgatagcttatgataacatcttaaagtttttgtaaaaacaa--ttccactttatttta 16982037  T
Q  144 t-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    | ||||||| | ||||||| |||| ||||| ||||||||||||    
T  16982038 tcttttgttatcgaaataagttatacataaacacttatatgat 16982080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 111
Target Start/End: Complemental strand, 25479647 - 25479580
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| |||||||||| ||| ||||||||||| |||| |  ||| |||||||||||| |||||||    
T  25479647 atgttcattagttgttttcagcttattttcataagctctctaggatagcttatgaaaacaacttatag 25479580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 32 - 124
Target Start/End: Original strand, 28689444 - 28689538
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataact--tatgaaaacagcttatagtttgtataaaaac 124  Q
    ||||||| ||| |||| |||||||||||||| ||| ||||||||||| | ||||| ||| ||  |||||||||| ||||||| || ||| |||||    
T  28689444 acagcttatgacatgtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttatatgaaaac 28689538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 40 - 165
Target Start/End: Original strand, 29007716 - 29007840
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttacttt-a 138  Q
    ||||||||||||||||||||||| ||| ||||  ||||| | | |||| || |  ||||||||| ||||||| || ||| |||  ||||||| ||||| |    
T  29007716 tgatatgttcataagttgttttcagcttatttcgataagcttttcaaagtagccgatgaaaacaacttatagcttatatgaaa--atagtttgactttaa 29007813  T
Q  139 ttttatttttgttgtagaaataactta 165  Q
    ||||  ||||||| |||||||||||||    
T  29007814 tttttcttttgttatagaaataactta 29007840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 37842359 - 37842426
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||  |||||| ||| ||||| ||||||||| ||| ||| |||||||||||| |||||||    
T  37842359 atgttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatag 37842426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 108
Target Start/End: Original strand, 38116083 - 38116146
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagctta 108  Q
    ||||| |||||||||| | ||| | ||||||||||||||||| |||||||| ||||||| ||||    
T  38116083 tgttcctaagttgtttccagcttactttcataagttctccaagataacttaagaaaacaactta 38116146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 226
Target Start/End: Complemental strand, 49173389 - 49173290
Alignment:
Q  128 gttttactttattttattt-ttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatcta 226  Q
    |||| |||||||||||||| || ||| ||||| | |||||  | ||||||||||||||  |||| ||||  |||||||| | ||||||||||||||||||    
T  49173389 gtttaactttattttatttgttattgcagaaacagcttatagacaagcacttatatgagaagtgcttatgctataagcacataattaagttgtttatcta 49173290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 11639408 - 11639486
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||| |||| |||||| ||||||  ||| ||||||||||| |||| | ||||||||||| |||||| |||||    
T  11639408 acagcttatgacatgtccataagctgtttttagcttattttcataagctctctagaataacttatgcaaacagtttata 11639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 14443527 - 14443449
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||| | |||||| ||||||||||||  || |||||||||| ||||||||  || ||||| |||||| ||||||    
T  14443527 acagcttttaacatgttcgtaagttgttttcaccttattttcataaattctccaatgtagcttataaaaacaccttata 14443449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 43 - 85
Target Start/End: Complemental strand, 15361107 - 15361065
Alignment:
Q  43 tatgttcataagttgttttcggctcattttcataagttctcca 85  Q
    |||||||||||||||||||| ||| ||||||||||| ||||||    
T  15361107 tatgttcataagttgttttcagcttattttcataagctctcca 15361065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 15558279 - 15558217
Alignment:
Q  48 tcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||||||| ||| ||||  |||||||||| |  ||| |||||||||||||||||||    
T  15558279 tcataagttgttttcagcttatttctataagttctctaggatatcttatgaaaacagcttata 15558217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 97
Target Start/End: Original strand, 46252673 - 46252739
Alignment:
Q  31 tacagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatg 97  Q
    |||| ||| ||| ||||||||||||||||||| | | ||||||||||| ||||||| ||| ||||||    
T  46252673 tacaacttatgacatgttcataagttgttttcaggttattttcataagctctccaagatagcttatg 46252739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 51695500 - 51695558
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    |||||||||| | ||||| ||| |||||||||| |||||||| ||| ||||||||||||    
T  51695500 tgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaaca 51695558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 51929783 - 51929845
Alignment:
Q  48 tcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| || |||||||| |||| |||||| |||| | |||| |||||||||||||||||||    
T  51929783 tcataagctgatttcggcttatttccataagctctctagaatagcttatgaaaacagcttata 51929845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 15784394 - 15784329
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||| ||||||||||  ||| ||||||| ||||||||||| ||| ||||| ||| |||||||||    
T  15784394 tgttcacaagttgtttttagcttattttcacaagttctccaagatagcttataaaaccagcttata 15784329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 110
Target Start/End: Complemental strand, 16322910 - 16322849
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||||||  ||| |||| |||||| ||| ||||||| | |||||||||||||||||    
T  16322910 cataagttgtttttagcttatttccataagctcttcaaaatagcctatgaaaacagcttata 16322849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 30371214 - 30371133
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||| |||||||||||||| ||| ||||  ||| | ||||||||||  |||||||||||| ||||||| || ||| ||||||    
T  30371214 atgtccataagttgttttcagcttatttcaatacgctctccaaaatgtcttatgaaaacaacttatagcttatatgaaaaca 30371133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 49888819 - 49888774
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    ||||||||| |||||||||||||||| || ||| ||||||||||||    
T  49888819 ttttcggcttattttcataagttctctaagatagcttatgaaaaca 49888774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 473227 - 473163
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| | |||||  || ||||||||||||||||||| | ||||||| |||||| |||||||    
T  473227 ttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaacttatag 473163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 110
Target Start/End: Original strand, 1865115 - 1865151
Alignment:
Q  74 ataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||| |||||||||||||||| |||||||||    
T  1865115 ataagttctcaaaaataacttatgaaatcagcttata 1865151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 4202233 - 4202273
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| |||||||||||||| | ||||||||||||||||    
T  4202233 ttttgttatagaaataacttatacttaagcacttatatgat 4202273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 117
Target Start/End: Original strand, 17577773 - 17577845
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgta 117  Q
    |||||||||| ||||||  ||| |||||  |||||||| ||| ||||||||  |||||||||||||| |||||    
T  17577773 tgttcataagctgttttaagcttatttttgtaagttcttcaagataacttacaaaaacagcttatagcttgta 17577845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 224
Target Start/End: Original strand, 24146363 - 24146442
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagca-taaaattaagttgtttatc 224  Q
    ||||||| |||||||||||||| |||||||||||  |||||  ||| | || ||||||||| | |||||||||||||||||    
T  24146363 ttttgttatagaaataacttatacataagcacttgcatgatatgtgctaat-ttataagcacttaaattaagttgtttatc 24146442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 24915058 - 24915122
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| | |||||  || ||||||| ||||||||||| | | ||||||||||||||||||||    
T  24915058 ttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatag 24915122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 27963362 - 27963438
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagctta 108  Q
    ||||||| ||| |||| |||||||||||||  ||| ||||  ||||| |||||| |||| |||||||||||| ||||    
T  27963362 acagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacaactta 27963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 44936673 - 44936773
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttat 223  Q
    ||||||| ||||||| |||| ||||||| |||||||||||| | | |||| | || | |||| || | ||||| |||||||||  |||||||||||||||    
T  44936673 atagtttgactttatcttatcttttgttatagaaataacttctacttaagtaattttttgatgagcgcttatactataagcatttaattaagttgtttat 44936772  T
Q  224 c 224  Q
    |    
T  44936773 c 44936773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 49517088 - 49517015
Alignment:
Q  92 cttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttat 166  Q
    |||||||||||||||||||| ||  || |||||  | ||| |||||||||||| ||||||| ||||||||||||||    
T  49517088 cttatgaaaacagcttatagcttaaatgaaaac--aatttgactttattttatcttttgttatagaaataacttat 49517015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 34 - 172
Target Start/End: Original strand, 49692046 - 49692181
Alignment:
Q  34 agcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagtttta 133  Q
    ||||| ||| |||| ||||  |||||||| ||| ||||||||| ||||||||  ||||||||||||||| ||| |||| |  |||| ||| ||||| | |    
T  49692046 agcttatgacatgtccatagtttgttttcagct-attttcata-gttctccaggataacttatgaaaacggctcatagct--tatataaatatagtctga 49692141  T
Q  134 ctttattttat-ttttgttgtagaaataacttattcataa 172  Q
    |||||||||||  ||| || |||||||||||||| |||||    
T  49692142 ctttattttatcctttattatagaaataacttatacataa 49692181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 8017512 - 8017440
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacag 104  Q
    ||||||| |||||||||||||| |||||||| ||  ||||||||||||||||||| ||| |||||||||||||    
T  8017512 acagcttatgatatgttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaacag 8017440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 111
Target Start/End: Original strand, 42621386 - 42621446
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||| ||| ||||||| |||||||||| |||||||||||||||||||||||||    
T  42621386 taagttgttttcagcttattttcacaagttctccagaataacttatgaaaacagcttatag 42621446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 29316767 - 29316846
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| ||| ||||||||||||| ||||| ||| |||| |||||||||||||| ||| || |||||||||||||||||    
T  29316767 acagcttatgacatgttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatag 29316846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 185
Target Start/End: Complemental strand, 3102728 - 3102619
Alignment:
Q  75 taagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataag 173  Q
    |||||||||||  |||| |||||||||||||| |||| || |||||||  ||||||| |||||||||||| ||||| | || ||||| ||||| ||||||    
T  3102728 taagttctccatgataaattatgaaaacagctaatagattatataaaa--atagtttgactttattttatattttgctataaaaatagcttatacataag 3102631  T
Q  174 cacttatatgat 185  Q
    || |||||||||    
T  3102630 cagttatatgat 3102619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 95
Target Start/End: Original strand, 28677651 - 28677714
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataactta 95  Q
    ||||||| ||| || |||||||||||||||||||| |||| |||||| ||||||||||||||||    
T  28677651 acagcttatgacattttcataagttgttttcggcttatttccataagctctccaaaataactta 28677714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 1625966 - 1625900
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||| ||||||| ||| |||||| |||||||||||| ||| |||||||||||| ||||||    
T  1625966 atgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttata 1625900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 92 - 180
Target Start/End: Complemental strand, 10143190 - 10143103
Alignment:
Q  92 cttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttat 180  Q
    |||||||||| | ||||||| || ||||||||||  |||| |||| ||||||| ||||||| |||||||||||||| |||||||||||||    
T  10143190 cttatgaaaaaaacttatagcttatataaaaaca--gtttgacttaattttatcttttgttatagaaataacttatacataagcacttat 10143103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 16398173 - 16398115
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    |||| ||||||| ||| ||||||||||||||||||| |||||||||||||| |||||||    
T  16398173 taagctgttttcagcttattttcataagttctccaacataacttatgaaaatagcttat 16398115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 45 - 103
Target Start/End: Original strand, 35379021 - 35379079
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    |||||||||||||||||| ||| ||||||||||| ||||||| ||| ||||||||||||    
T  35379021 tgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 39621973 - 39621890
Alignment:
Q  88 ataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttt-tgttgtagaaataacttattcataagc 174  Q
    |||||||||||||||||||||||| || || ||||    ||||| ||||||||||||||| |||| |||||||| |||||||||||||    
T  39621973 ataacttatgaaaacagcttatagattatacaaaa----agtttgactttattttattttgtgttatagaaatatcttattcataagc 39621890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 58 - 203
Target Start/End: Complemental strand, 11513950 - 11513809
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtaga 156  Q
    ||||| ||| |||| || ||||||||||  ||| |||||||||||| ||||||| || ||| |||||  | ||| |||||||||||| |||||||||       
T  11513950 ttttcagcttatttccaaaagttctccatgatagcttatgaaaacaacttatagcttatatgaaaac--aatttgactttattttatcttttgttgt--- 11513856  T
Q  157 aataacttattcataagcacttatatgattagtgtttatattataag 203  Q
    |||||||||| ||||| | |||||||||| |||| |||| |||||||    
T  11513855 aataacttatacataaacccttatatgataagtgcttatgttataag 11513809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 109
Target Start/End: Complemental strand, 40158796 - 40158719
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    ||||||| ||| ||||| ||||||||||||| ||| | || |||||| |||||| ||||||||||||||||| |||||    
T  40158796 acagcttatgacatgtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaacaacttat 40158719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 44438831 - 44438941
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttt 131  Q
    ||||||| ||| ||||||||||  ||||||| ||| |||| || ||| ||||||  |||||||||||| ||||||||| | ||||| ||||||  |||||    
T  44438831 acagcttatgacatgttcataacctgttttcagcttatttccacaagatctccaggataacttatgaagacagcttatggcttgtacaaaaac--agttt 44438928  T
Q  132 tactttattttat 144  Q
     ||||||||||||    
T  44438929 gactttattttat 44438941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 125
Target Start/End: Complemental strand, 9395195 - 9395115
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||| ||||| ||||||| ||| ||||||||||| ||| || ||||||| ||||||||||||||||| || ||| ||||||    
T  9395195 tgtttataagctgttttcagcttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaaaaca 9395115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 40279332 - 40279268
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    |||||||||  ||||||| ||| ||||||||||||||||||| ||| |||||||||||| |||||    
T  40279332 tgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 45 - 109
Target Start/End: Complemental strand, 40279402 - 40279338
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    |||||||||  ||||||| ||| ||||||||||||||||||| ||| |||||||||||| |||||    
T  40279402 tgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaacaacttat 40279338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 179
Target Start/End: Complemental strand, 2416353 - 2416245
Alignment:
Q  70 tttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattc 168  Q
    ||||||||||||||  | ||||||||| |||||||||||||| || ||| |||||  | ||| |||| ||||||| ||||| |  ||||||||||||| |    
T  2416353 tttcataagttctcttatataacttataaaaacagcttatagcttatatcaaaac--aatttaacttcattttatcttttgctacagaaataacttatac 2416256  T
Q  169 ataagcactta 179  Q
    |||||||||||    
T  2416255 ataagcactta 2416245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 44 - 103
Target Start/End: Original strand, 38078414 - 38078473
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    ||||||||||||||||||  |||||||| |||||| ||||||| ||| ||||||||||||    
T  38078414 atgttcataagttgttttgagctcatttacataagctctccaagatagcttatgaaaaca 38078473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 44 - 180
Target Start/End: Complemental strand, 4026883 - 4026748
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    |||||| ||||  |||||| ||| ||||||||||||||| ||  |||| |||||||||||||||||| ||  |||  ||| ||| ||| |||||||||||    
T  4026883 atgttcctaagcagttttcagcttattttcataagttcttcaggataatttatgaaaacagcttataatt--tatgcaaaaataatttaactttatttta 4026786  T
Q  144 t-ttttgttgtagaaataacttattcataagcacttat 180  Q
    | ||||| | || ||||| |||||  ||||||||||||    
T  4026785 tcttttgctataaaaatagcttatagataagcacttat 4026748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 175
Target Start/End: Complemental strand, 5133823 - 5133708
Alignment:
Q  59 tttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaa 157  Q
    |||| ||| |||| |||||| ||||  | ||||||| |||||||||||||||  || |||||||||  |||||  ||||||||||| ||||||| |||||    
T  5133823 tttcagcttatttccataagctctcttagataacttttgaaaacagcttatatcttatataaaaac--agtttatctttattttatcttttgttatagaa 5133726  T
Q  158 ataacttattcataagca 175  Q
    ||| ||||| ||||||||    
T  5133725 atagcttatacataagca 5133708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Complemental strand, 6227811 - 6227737
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaac 124  Q
    ||||||||||||| |||  ||  |||||| ||||||||||| |||||||||||  |||||||||| |||||||||    
T  6227811 ataagttgttttcagcttgttaccataagctctccaaaatagcttatgaaaaccacttatagtttatataaaaac 6227737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 7871722 - 7871644
Alignment:
Q  31 tacagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    |||| ||| ||||||| ||||||| ||||||| ||| |||| |||||| ||| ||||| | ||||||||||||||||||    
T  7871722 tacaccttatgatatgatcataaggtgttttcagcttatttccataagctcttcaaaagagcttatgaaaacagcttat 7871644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 43 - 116
Target Start/End: Original strand, 6718537 - 6718609
Alignment:
Q  43 tatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgt 116  Q
    |||| ||||||| ||||||| ||| ||||||||||||| ||||| ||| ||||| |||||||| ||||||||||    
T  6718537 tatggtcataagctgttttcagcttattttcataagtt-tccaagatatcttataaaaacagcatatagtttgt 6718609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 86
Target Start/End: Original strand, 7928304 - 7928345
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaa 86  Q
    |||||||||||||||||| ||| |||||||||||||||||||    
T  7928304 tgttcataagttgttttcagcttattttcataagttctccaa 7928345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 50 - 111
Target Start/End: Original strand, 13869105 - 13869166
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||||||||   | |||||||| |||||||||  ||||||||||||||||||||||||    
T  13869105 ataagttgttttcaaattattttcattagttctccaggataacttatgaaaacagcttatag 13869166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 18066170 - 18066113
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||||| |||||||||||| ||| |||||||||||||||||||| || ||| ||||||    
T  18066170 attttcttaagttctccaagatagcttatgaaaacagcttatagcttatatgaaaaca 18066113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 26143645 - 26143714
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    |||||| | ||| ||||| ||| |||||||||||||||||||  || ||||||||||||||||| |||||    
T  26143645 tgttcacaggttattttcagcttattttcataagttctccaagttagcttatgaaaacagcttacagttt 26143714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 33931574 - 33931655
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||||||||||||  |||| ||| |||| ||  | |||||||||||| |||||||||||||||||||| || || |||||||    
T  33931574 atgttcataagtttatttcagcttatttccactatttctccaaaatagcttatgaaaacagcttatagcttatacaaaaaca 33931655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 40279262 - 40279197
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||  | ||||| ||| ||||||||||||||||||| ||| |||||||||||| ||||||    
T  40279262 tgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttata 40279197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 110
Target Start/End: Original strand, 40682400 - 40682464
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||||||||||  || ||||||||||||||| ||| ||| ||||||||||| |||||||    
T  40682400 tgttcataagttgttttcaacttattttcataagttct-caagatatcttatgaaaactgcttata 40682464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 2400126 - 2400042
Alignment:
Q  141 ttatttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatct 225  Q
    |||| |||||| |||||| ||||||| |||||||||||||||||| | |||||||   |||| |||  ||||||| |||||||||    
T  2400126 ttatctttgttatagaaacaacttatacataagcacttatatgataattgtttatgccataaacatttaattaaggtgtttatct 2400042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 184
Target Start/End: Complemental strand, 3673786 - 3673734
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttatatga 184  Q
    |||||||||||| ||||||| ||||||||||| || |||||||||||||||||    
T  3673786 actttattttatattttgttatagaaataactaatacataagcacttatatga 3673734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 92 - 190
Target Start/End: Original strand, 17952753 - 17952850
Alignment:
Q  92 cttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtg 190  Q
    |||||||||||| ||| ||| || ||| ||||  |||||| |||||||||||| ||||||| |||||||| |||||  |||||| |||||||||| ||||    
T  17952753 cttatgaaaacatcttgtagcttatatgaaaa--tagtttgactttattttatcttttgttatagaaatagcttatatataagctcttatatgataagtg 17952850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 33197330 - 33197422
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    |||||||| ||| ||||||| |||||||| |||||  ||||||||||||||||| || |||||| |||||||  |  |||| |||||||||||    
T  33197330 actttattctatcttttgttatagaaatagcttatagataagcacttatatgataagcgtttatgttataagtgtttaatttagttgtttatc 33197422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 1893285 - 1893352
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||| |||||||| ||||| ||| ||||||| ||||||||||| ||| |||  |||||||||||||||    
T  1893285 atgtacataagttattttcagcttattttcacaagttctccaagatagcttccgaaaacagcttatag 1893352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 6167311 - 6167354
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||    
T  6167311 atttccataagttctccaaaatagcttataaaaacagcttatag 6167354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 45 - 112
Target Start/End: Complemental strand, 9174880 - 9174813
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagt 112  Q
    |||||||||| | ||||| ||| ||||||||||| |||  || ||| |||||||||||||||||||||    
T  9174880 tgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagcttatagt 9174813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 48 - 103
Target Start/End: Complemental strand, 15978047 - 15977992
Alignment:
Q  48 tcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaaca 103  Q
    |||||| |||||||| ||| ||||||||||  ||||||||||| ||||||||||||    
T  15978047 tcataaattgttttcagcttattttcataatctctccaaaatagcttatgaaaaca 15977992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 28803591 - 28803650
Alignment:
Q  127 agttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||| |||||||||||| ||||||| | ||||||||||||  |||||||||||||||||    
T  28803591 agtttgactttattttatcttttgttatcgaaataacttatatataagcacttatatgat 28803650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 33319830 - 33319897
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||| ||| ||||||||||||||||||| |||  |||||||||||| ||||||| | || |||||||    
T  33319830 ttttcagcttattttcataagttctccaagatagtttatgaaaacagtttatagtatatacaaaaaca 33319897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 111
Target Start/End: Original strand, 36415677 - 36415744
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||| ||||||||||||||  || |||||| |||||||| ||  ||| ||||||||||||||||||||    
T  36415677 atgtgcataagttgttttcatcttattttcgtaagttctacatgatagcttatgaaaacagcttatag 36415744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 1493520 - 1493598
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||||||||||||||| ||| |||||||||||||   ||  || ||||||||||||||| ||||| || ||| ||||||    
T  1493520 ttcataagttgttttcagcttattttcataagttagtcaggatgacttatgaaaacagcatatagcttatatgaaaaca 1493598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 110
Target Start/End: Complemental strand, 10567135 - 10567057
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||| ||| ||||||||||||||| ||| ||||||| ||| |||||| ||||  ||||| |||||| |||||    
T  10567135 acagcttatgacatgatcataagttgttttcagctaattttcacaagctctccagaatagtttatggaaacagtttata 10567057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 21616655 - 21616701
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    ||||||||||||||||||||||| || ||||||| ||||||| ||||    
T  21616655 attttcataagttctccaaaatagctaatgaaaatagcttattgttt 21616701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 107
Target Start/End: Complemental strand, 26626938 - 26626876
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagctt 107  Q
    |||||||||  ||||||| | | ||||||||||||||| ||| ||| ||||||||||||||||    
T  26626938 tgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagctt 26626876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 35485987 - 35485880
Alignment:
Q  40 tgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttat 139  Q
    ||||||||||||||| ||||||| |||||||| |||| | ||| ||  ||| ||||| |||||| ||||||| |  |||||  | ||||||| |||||||    
T  35485987 tgatatgttcataagctgttttcagctcatttccataggctcttcaggatagcttataaaaacaacttatagct--tataatgaaatagtttgactttat 35485890  T
Q  140 tttatttttg 149  Q
    ||||| ||||    
T  35485889 tttatctttg 35485880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 35809909 - 35809859
Alignment:
Q  135 tttattttatttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||||| |||||  | |||||||||||| ||||||||||||||||||    
T  35809909 tttattttatctttgtcatggaaataacttatacataagcacttatatgat 35809859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 42409331 - 42409373
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||| |||||| |||||||||||||||||| |||||    
T  42409331 attttcataagctctccagaataacttatgaaaacagtttata 42409373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Original strand, 12464491 - 12464544
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||| ||| ||||||| ||||||||||| ||| |||||||||| |||||||||    
T  12464491 ttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatag 12464544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 16451183 - 16451118
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| || ||||||| ||| |||||||  |||||||||| ||| |||| ||||||||||||||    
T  16451183 tgttcatgagctgttttcagcttattttcacgagttctccaagatagcttacgaaaacagcttata 16451118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 22681189 - 22681270
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||||||| ||||||  ||| |||| ||||||||||| |  |||  ||||||||||||||||||| || ||| ||||||    
T  22681189 atgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaaca 22681270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 144
Target Start/End: Complemental strand, 33256818 - 33256708
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttt 131  Q
    ||||||| ||| ||||||||||  |||| || ||| ||||||||| | ||| ||  ||  ||||||||||| ||||||||||| ||| |||||  |||||    
T  33256818 acagcttatgacatgttcataaactgttctcagcttattttcatacggtcttcaggatggcttatgaaaactgcttatagtttatatgaaaac--agttt 33256721  T
Q  132 tactttattttat 144  Q
     ||||||||||||    
T  33256720 gactttattttat 33256708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 109
Target Start/End: Complemental strand, 40279449 - 40279408
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    ||||||||||||||||||| ||| |||||||||||| |||||    
T  40279449 attttcataagttctccaatatagcttatgaaaacaacttat 40279408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 101
Target Start/End: Complemental strand, 44443387 - 44443330
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 101  Q
    ||||||||||||||||||| ||| ||||||||| | |||| || ||| ||||||||||    
T  44443387 atgttcataagttgttttcagcttattttcatatgctctcaaagatagcttatgaaaa 44443330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 228
Target Start/End: Original strand, 5867278 - 5867378
Alignment:
Q  129 ttttactttattt-tatttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatctaa 227  Q
    ||||||||||||| | |||||||| |||||||| ||||  |||||  ||||||||||| |||||| ||  ||||| ||  ||||||  ||||||||||||    
T  5867278 ttttactttatttctttttttgttttagaaatagcttagacataaatacttatatgataagtgttgatgctataaacactaaattaccttgtttatctaa 5867377  T
Q  228 a 228  Q
    |    
T  5867378 a 5867378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 11344340 - 11344425
Alignment:
Q  96 tgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatat 182  Q
    ||||||||  |||||| |||||| ||||||   ||| ||||| |||||| ||||||| |||||||| ||||| |||||||||||||||    
T  11344340 tgaaaacaatttatagcttgtatgaaaacaa--tttgactttcttttatcttttgttatagaaatatcttatgcataagcacttatat 11344425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 16867802 - 16867738
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||  || |||| |||||| ||||||| ||| ||| |||||||| |||||||    
T  16867802 ttcataagttgttttcaacttatttccataagctctccaagatagcttgtgaaaacaccttatag 16867738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 23974510 - 23974562
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||| ||||||||||||||||||||| || ||| |||| ||||| ||||||||    
T  23974510 tttttggctcattttcataagttctcaaatatagcttaagaaaaaagcttata 23974562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 26202091 - 26202027
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| | |||||  || ||||||||||||||||||| ||| ||||| |||||| |||||||    
T  26202091 ttcataagcttttttcaacttattttcataagttctccaatatatcttataaaaacaacttatag 26202027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 45 - 125
Target Start/End: Original strand, 28039337 - 28039417
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    |||||||||| ||||||| ||| |||| ||||| || ||||| | | ||||||||||  ||||||||||| ||| ||||||    
T  28039337 tgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaaaca 28039417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 190
Target Start/End: Complemental strand, 37053579 - 37053515
Alignment:
Q  127 agttttactttattttatttt-tgttgtagaaataacttattcataagcacttatatgattagtg 190  Q
    ||||| ||||||||||||||| |||| ||||||||   ||| |||||||||||||||||| ||||    
T  37053579 agtttgactttattttattttctgttatagaaatagtctatacataagcacttatatgataagtg 37053515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 106
Target Start/End: Complemental strand, 42458008 - 42457952
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagct 106  Q
    ||||||||||||| ||| ||||||||| |||||| || ||| |||||||| ||||||    
T  42458008 ataagttgttttcagcttattttcatatgttctctaagatagcttatgaatacagct 42457952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 179
Target Start/End: Complemental strand, 43199431 - 43199346
Alignment:
Q  93 ttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcactta 179  Q
    ||||||||||| ||||||| ||  |||  || ||| ||| |||||||||||| |||||||||||||||||||||| || |||| ||||    
T  43199431 ttatgaaaacaacttatagctt--atacgaagataatttaactttattttatcttttgttgtagaaataacttatacagaagcgctta 43199346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 44; Significance: 4e-16; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 180
Target Start/End: Original strand, 36783338 - 36783474
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    ||||||||||| ||||||| ||| || ||||||| | |||||| ||| ||||||||||||||| ||||||| ||| |||||  | |||||||||||||||    
T  36783338 atgttcataagctgttttcagcttatattcataattgctccaatatagcttatgaaaacagctaatagtttatatgaaaac--aattttactttatttta 36783435  T
Q  144 t-ttttgttgtagaaataac-ttattcataagcacttat 180  Q
    | ||||| | |||||||| | |||| ||||| |||||||    
T  36783436 tcttttggtatagaaatagctttatacataaacacttat 36783474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 39602202 - 39602280
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||| |||||||||| ||||||||  || |||||||||||||||| || ||| |||||||||||||||||||    
T  39602202 acagcttatgacatgttcataaattgttttcaacttattttcataagttctcaaagatagcttatgaaaacagcttata 39602280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 20192598 - 20192744
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttt 131  Q
    ||||||| ||| |||| |||||| |||||||  ||||||| |||||| |||||  ||||| |||  |||||||||||||| || ||| |||||   ||||    
T  20192598 acagcttatgacatgtccataagctgttttcaactcatttccataagctctcccgaataagttacaaaaacagcttatagattatatgaaaac--tgttt 20192695  T
Q  132 tactttattttat-ttttgttgtagaaataacttattcataagcactta 179  Q
     |||||||||||| ||||||| || ||||| ||||| ||||||||||||    
T  20192696 gactttattttatcttttgttatataaatagcttatacataagcactta 20192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 185
Target Start/End: Original strand, 34924547 - 34924681
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttattttt 148  Q
    |||| ||||||||| ||| ||||||||||| |||| || ||| |||||||||| |||| ||||||| |||||||   | |||| | ||| ||||||||||    
T  34924547 catatgttgttttcagcttattttcataagctctctaagatagcttatgaaaatagctcatagtttttataaaa--gtcgtttgattttgttttattttt 34924644  T
Q  149 gttgtagaaataacttattcataagcacttatatgat 185  Q
     ||||||||||| |||||  || | ||||||||||||    
T  34924645 tttgtagaaatagcttataaatgaacacttatatgat 34924681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 52440656 - 52440733
Alignment:
Q  34 agcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||| ||| |||||||||||||||||||  || ||||||||||||||| ||| |||| ||||||||| |||||||||    
T  52440656 agcttatgacatgttcataagttgttttcaactaattttcataagttcttcaagataaattatgaaaatagcttatag 52440733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 49 - 111
Target Start/End: Complemental strand, 2719529 - 2719467
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||| || ||| ||||||||||||||||||| ||| ||||||||||||| ||||||    
T  2719529 cataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagtttatag 2719467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 3015934 - 3016012
Alignment:
Q  127 agttttactttattttatttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagca 205  Q
    ||||| |||| ||||||| |||||| ||||||||| | || ||||||||||||||| || ||||||||| |||||||||    
T  3015934 agtttgacttcattttatctttgttatagaaataattaatacataagcacttatataataagtgtttatgttataagca 3016012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 20669238 - 20669172
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||| ||||||| ||| |||| |||||| ||||||| ||| |||||||||||||||||||    
T  20669238 atgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 33405166 - 33405252
Alignment:
Q  40 tgatatgttcataagttgttttcggctcat-tttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||||||||||  ||||||||||| |  ||||||||||||| ||| ||| |||||||||||||||||||| || ||| ||||||    
T  33405166 tgatatgttcataaactgttttcggcttaactttcataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaaca 33405252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 36887578 - 36887504
Alignment:
Q  36 cttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||||||||||| ||||||| ||| ||||||||||||||| ||| ||  |||||||||||| ||||||    
T  36887578 cttttgacatgttcataagatgttttcagcttattttcataagttcttcaagatggcttatgaaaacaacttata 36887504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 44 - 110
Target Start/End: Complemental strand, 40665495 - 40665429
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||||||| ||||||| ||| ||||| ||||| ||||||| |||||||||||||||| ||||||    
T  40665495 atgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttata 40665429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 21367732 - 21367667
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||| ||| ||||||| ||| ||||||||||||||||||| ||| |||||||||||| ||||||    
T  21367732 tgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttata 21367667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 113
Target Start/End: Original strand, 33883754 - 33883823
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtt 113  Q
    ||||||||||||||||||| ||| |||||||||||||||| || ||| |||||| ||||| | |||||||    
T  33883754 atgttcataagttgttttcagcttattttcataagttctctaagatagcttatgtaaacaacatatagtt 33883823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 54775194 - 54775054
Alignment:
Q  43 tatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttt 142  Q
    ||||| |||||| || ||||  || ||||||||||  ||||||  |||||||| |||||||||||||| |   |||| ||| || |||| ||||||||||    
T  54775194 tatgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttataat---tatataaaaatggtttgactttatttt 54775098  T
Q  143 at-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    || ||||||| |||||||||||||  | ||||||||| ||||||    
T  54775097 atcttttgttatagaaataacttaaacgtaagcacttttatgat 54775054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 49 - 195
Target Start/End: Complemental strand, 38462342 - 38462197
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttt 147  Q
    |||||||||||||| ||| |||| |||||| | ||    ||| ||||||||||||| ||||||  | ||| ||||||  |||| |||||||||||| |||    
T  38462342 cataagttgttttcagcttatttccataagctatcttggatagcttatgaaaacagtttatagcatatatgaaaaca--gtttgactttattttatcttt 38462245  T
Q  148 tgttgtagaaataacttattcataagcacttatatgattagtgtttat 195  Q
    || | |||||||| |||||  |||| |||||||||||| |||||||||    
T  38462244 tggtatagaaatagcttataaataaacacttatatgataagtgtttat 38462197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 58 - 105
Target Start/End: Original strand, 3845580 - 3845627
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagc 105  Q
    ||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  3845580 ttttcagcttattttcataagttctccaagataacttatgaaaacagc 3845627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 41633420 - 41633361
Alignment:
Q  50 ataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    |||| |||||||| ||| ||||||||||| ||||||||||| || |||||||||||||||    
T  41633420 ataaattgttttcagcttattttcataagctctccaaaatagctgatgaaaacagcttat 41633361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 50600194 - 50600249
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| ||| ||||||||||||||||||| ||| || |||||||||||||||||    
T  50600194 tgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttatag 50600249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 1217792 - 1217870
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| ||| |||| ||||||||||||||  || | |||||||||||||| |  ||| |||||||||||||||||||    
T  1217792 acagcttatgacatgtccataagttgttttcatcttactttcataagttctcaaggatagcttatgaaaacagcttata 1217870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 24158531 - 24158645
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatt--tttgttgtagaaataactta 165  Q
    |||| |||||| ||||||  ||| ||||||||||||||||||   || |||||| |    |||| |||||| ||||||  |||||| |||||||||||||    
T  24158531 atttccataagctctccaggatagcttatgaaaacagcttattacttatataaaca----gtttcactttactttattcatttgttatagaaataactta 24158626  T
Q  166 ttcataagcacttatatga 184  Q
    | |||||||||||||||||    
T  24158627 tacataagcacttatatga 24158645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 123
Target Start/End: Original strand, 34610811 - 34610889
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaa 123  Q
    ||||||||||| |||||| ||| |||||||||||||| |||| ||| ||||||||| || ||||||  ||||| |||||    
T  34610811 tgttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaagcaacttataacttgtacaaaaa 34610889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 134 - 203
Target Start/End: Complemental strand, 39971297 - 39971227
Alignment:
Q  134 ctttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataag 203  Q
    ||||||||||| ||||||| || || |||||||| |||||||||||||||||| |||||| || |||||||    
T  39971297 ctttattttatcttttgttatataagtaacttatacataagcacttatatgataagtgttgatgttataag 39971227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 26320107 - 26320176
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    |||||||||||||||||| | | |||||| |||||||| ||| | | |||||||||| ||||||||||||    
T  26320107 tgttcataagttgttttcagtttattttcgtaagttcttcaagagagcttatgaaaaaagcttatagttt 26320176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 180
Target Start/End: Original strand, 30573918 - 30574051
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    ||||||||||| ||||||| ||| || ||||| || ||||||| ||| |||||||||||| | ||||| |  |||||||| | |  || |||||||||||    
T  30573918 atgttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaacatcatatagat--tataaaaaaaaaacttaactttatttta 30574015  T
Q  144 tttttgttgtagaaataacttattcataagcacttat 180  Q
    | ||| || |||||||| ||||| ||||||| |||||    
T  30574016 tcttt-ttatagaaatagcttatacataagcgcttat 30574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 109
Target Start/End: Complemental strand, 37273200 - 37273135
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    |||| ||||||||||||||  || |||| |||||||||||||| ||| ||||||||||||| ||||    
T  37273200 atgtccataagttgttttcaacttatttccataagttctccaagatagcttatgaaaacagtttat 37273135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 56 - 124
Target Start/End: Original strand, 14548737 - 14548805
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaac 124  Q
    ||||||| ||| |||| |||||| |||||| ||||||||||||||||| ||||||| || ||| |||||    
T  14548737 tgttttcagcttatttccataagctctccagaataacttatgaaaacaacttatagcttatatgaaaac 14548805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 20173982 - 20174042
Alignment:
Q  136 ttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttat 195  Q
    ||||||||| ||||||| ||||||||||| || ||||||||||||||| | ||||||||||    
T  20173982 ttattttatcttttgttatagaaataactaatacataagcacttatataactagtgtttat 20174042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 49 - 175
Target Start/End: Complemental strand, 23785316 - 23785191
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttt- 147  Q
    |||||||||||||| |||  ||| |||||| ||||||  | | ||| ||||||||| |||||| || ||| || |||  |||| |||||||||||| ||     
T  23785316 cataagttgttttcagcttgtttccataagctctccatgagagcttgtgaaaacagtttatagcttatatgaataca--gtttgactttattttatcttc 23785219  T
Q  148 tgttgtagaaataacttattcataagca 175  Q
    || |||||||||||||||| ||||||||    
T  23785218 tgctgtagaaataacttatgcataagca 23785191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 28622006 - 28622070
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| ||||||| | | |||||||||||||||| || |||  |||||||||||||||||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatag 28622070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 44747427 - 44747479
Alignment:
Q  59 tttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||| ||| ||||||||||||| ||||| ||| ||||||||||||||||||||    
T  44747427 tttcagcttattttcataagttttccaagatagcttatgaaaacagcttatag 44747479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 4526396 - 4526439
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||    
T  4526396 attttcataagttcttcaaaataacttataaaaacaacttatag 4526439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 185
Target Start/End: Original strand, 16790181 - 16790232
Alignment:
Q  135 tttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||||| ||||||| ||||||||||||||  |||||||||||||||||    
T  16790181 tttattttatcttttgttatagaaataacttatatataagcacttatatgat 16790232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 22203472 - 22203429
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||    
T  22203472 attttcataagttctccaagatagcttatgaaaacaacttatag 22203429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 32582786 - 32582747
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagctt 107  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  32582786 atttccataagttctccaaaatagcttatgaaaacagctt 32582747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Original strand, 46886720 - 46886763
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| ||||||||||| ||| ||||||||||||||||||||    
T  46886720 attttcaaaagttctccaagatagcttatgaaaacagcttatag 46886763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 193
Target Start/End: Complemental strand, 32064456 - 32064358
Alignment:
Q  93 ttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgt 191  Q
    ||||||| ||| | |||||||| ||||||||  || ||| |||||||||||| ||||||| |||||| ||||||| ||| |||||| ||||||| |||||    
T  32064456 ttatgaacacaacatatagttt-tataaaaa--taatttgactttattttattttttgttttagaaagaacttatacattagcactaatatgataagtgt 32064360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 44 - 86
Target Start/End: Original strand, 47249490 - 47249532
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaa 86  Q
    |||||||||||||||||| |||| |||||||||||| ||||||    
T  47249490 atgttcataagttgtttttggcttattttcataagtcctccaa 47249532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Original strand, 18405861 - 18405902
Alignment:
Q  70 tttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||| ||| |||||||||||| |||||||    
T  18405861 tttcataagttctccaagatagcttatgaaaacaacttatag 18405902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 107
Target Start/End: Complemental strand, 23816086 - 23816053
Alignment:
Q  74 ataagttctccaaaataacttatgaaaacagctt 107  Q
    ||||||||||||||||| ||||||||||||||||    
T  23816086 ataagttctccaaaatagcttatgaaaacagctt 23816053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 27792859 - 27792798
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| || ||||||||| ||||||| | |||||| ||||| ||||||||||||||||||    
T  27792859 atagtttgaccttattttatcttttgtttttgaaatagcttatacataagcacttatatgat 27792798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 111
Target Start/End: Complemental strand, 30443945 - 30443892
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||| ||| ||||||||||||||||||| |||  |||| ||||||||||||||    
T  30443945 ttttcagcttattttcataagttctccaatatagtttataaaaacagcttatag 30443892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 59 - 144
Target Start/End: Original strand, 34254827 - 34254911
Alignment:
Q  59 tttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat 144  Q
    |||| ||| |||| ||||||||||||| |||| |||||||||| || |||||| |  |||||||| | ||||| ||||||||||||    
T  34254827 tttcagcttatttacataagttctccagaatagcttatgaaaatagtttatagctaatataaaaa-acagtttgactttattttat 34254911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 185
Target Start/End: Original strand, 41028942 - 41028995
Alignment:
Q  133 actttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||||| | ||||||| |||||||| ||||| ||||||||||||||||||    
T  41028942 actttattttttcttttgttatagaaatagcttatacataagcacttatatgat 41028995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 101
Target Start/End: Complemental strand, 45541649 - 45541580
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaa 101  Q
    ||||||| ||| ||||||||||| ||||||| | | ||| ||||||||| ||||| ||| ||||||||||    
T  45541649 acagcttatgacatgttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaa 45541580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 2128262 - 2128326
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagctta 108  Q
    ||||||||||| ||||||| ||| ||||||||| |||||  || ||  |||||||||||||||||    
T  2128262 atgttcataagctgttttcagcttattttcatacgttctaaaagatggcttatgaaaacagctta 2128326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 109
Target Start/End: Original strand, 12985354 - 12985414
Alignment:
Q  49 cataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttat 109  Q
    |||||||||||||||||| |||| ||||||||||  |  ||| ||||||||||||| ||||    
T  12985354 cataagttgttttcggcttatttccataagttcttgaggatagcttatgaaaacagtttat 12985414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Complemental strand, 25185959 - 25185919
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| || ||||| ||||||||||||||||||||||||    
T  25185959 ttttgttatataaatatcttattcataagcacttatatgat 25185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 25776180 - 25776116
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| ||||||| ||| | || |||||||||| ||| | |||||||||||||| |||||||    
T  25776180 ttcataagctgttttcagcttacttccataagttcttcaagacaacttatgaaaacaacttatag 25776116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 28283681 - 28283721
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| ||||| |||||||| ||||||||||||||||||    
T  28283681 ttttgttatagaagtaacttatgcataagcacttatatgat 28283721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 47 - 111
Target Start/End: Complemental strand, 39980792 - 39980728
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| | |||||  || ||||||||||||||||||| ||| ||||| |||||| |||||||    
T  39980792 ttcataagcttttttcaacttattttcataagttctccaatatagcttataaaaacaacttatag 39980728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 47319273 - 47319345
Alignment:
Q  42 atatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagttt 114  Q
    ||||||| |||||||| ||||  || ||||||||||| |||| || |||  |||||| |||||||||||||||    
T  47319273 atatgttaataagttgatttctacttattttcataagctctctaagatagattatgacaacagcttatagttt 47319345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 51278242 - 51278318
Alignment:
Q  127 agttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataa 202  Q
    ||||| ||||||||| || ||||||| |||||||| ||||| ||| |||| ||||||||| | || |||||||||||    
T  51278242 agtttgactttatttaatattttgttatagaaatagcttatacattagcaattatatgataaatgcttatattataa 51278318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 104
Target Start/End: Original strand, 54180772 - 54180844
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacag 104  Q
    ||||||| ||| |||| |||||||||||||  ||| ||||  ||||| |||||| |||| |||||||||||||    
T  54180772 acagcttatgacatgtccataagttgtttttagcttatttatataagctctccataatagcttatgaaaacag 54180844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 93 - 224
Target Start/End: Complemental strand, 27593 - 27463
Alignment:
Q  93 ttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatttt-tgttgtagaaataacttattcataagcacttatatgattagtgt 191  Q
    ||||||||||| |||||||||| ||| ||||||   ||| |||||||||||| || |||| |||||||||||||| |||||||||||| ||||| || |     
T  27593 ttatgaaaacaacttatagtttatatgaaaacaa--tttgactttattttatcttctgttatagaaataacttatacataagcacttacatgataagagc 27496  T
Q  192 ttatattataagcataaaattaagttgtttatc 224  Q
    ||||  ||||||| |  | ||||||||||||||    
T  27495 ttatgctataagcgtttatttaagttgtttatc 27463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 21313 - 21355
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||||||||| |||||||| ||| |||||||||||||||||||    
T  21313 attttcataatttctccaatatagcttatgaaaacagcttata 21355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 47 - 166
Target Start/End: Complemental strand, 2735132 - 2735014
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-t 145  Q
    |||||||| ||||||||||| ||||||||||||| | ||| ||  |||||||||||||||||||| |  |||| ||| ||| ||| |||||||||||| |    
T  2735132 ttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagat--tatacaaaaataatttaactttattttatct 2735035  T
Q  146 tttgttgtagaaataacttat 166  Q
    |||||| |||| ||| |||||    
T  2735034 tttgttatagacatagcttat 2735014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 4006783 - 4006645
Alignment:
Q  41 gatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatt 140  Q
    ||||||| |||||||| ||||| ||| ||||||||||  ||||    ||| |||||||||||| ||||||| || ||||||||||   ||| ||||||||    
T  4006783 gatatgtccataagttattttcagcttattttcataacctctcagggatagcttatgaaaacaacttatagcttatataaaaacaa--tttgactttatt 4006686  T
Q  141 ttatt-tttgttgtagaaataacttattcataagcacttat 180  Q
    ||||  |||||| |||||||| ||||| |||||||||||||    
T  4006685 ttatcatttgttatagaaatatcttatgcataagcacttat 4006645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 185
Target Start/End: Complemental strand, 6647463 - 6647315
Alignment:
Q  34 agcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagtttta 133  Q
    ||||| ||| ||||||||||| |||||||  || ||||||||||| |||| || ||| ||||||||||||| |||||   | ||| |||   || ||| |    
T  6647463 agcttatgacatgttcataagatgttttcaacttattttcataagctctctaagatagcttatgaaaacagattataacctatattaaa--gtaatttga 6647366  T
Q  134 ctttattttatttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| | |||||||| |||||||||||||| |||||||||| |||||||    
T  6647365 ctttattat-tttttgttatagaaataacttatacataagcactcatatgat 6647315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 111
Target Start/End: Complemental strand, 24982743 - 24982704
Alignment:
Q  72 tcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24982743 tcataagttctccaaaataacttatgaaaacagcttatag 24982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 31624168 - 31624089
Alignment:
Q  32 acagcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| ||| ||||||||||| |||||||  || |||||||||| |||||||| ||| | ||||||||||||||||||    
T  31624168 acagcttatgacatgttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatag 31624089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 184
Target Start/End: Complemental strand, 32513811 - 32513752
Alignment:
Q  125 atagttttactttattttatttttgttgtagaaataacttattcataagcacttatatga 184  Q
    ||||||| ||||||||||||||||||| |||||||||||||| ||||| |||| ||||||    
T  32513811 atagtttgactttattttatttttgttatagaaataacttatgcataaacactaatatga 32513752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 43 - 185
Target Start/End: Complemental strand, 5329040 - 5328900
Alignment:
Q  43 tatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttt 142  Q
    ||||| |||||| || ||||  || ||||||||||  ||||||  |||||||| |||||||||||||| |   |||| ||| || |||| ||||||||||    
T  5329040 tatgtccataagctgctttcatcttattttcataaactctccatgataacttacgaaaacagcttataat---tatataaaaatggtttgactttatttt 5328944  T
Q  143 at-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    || ||||||| |||||||||||||  | ||||||||| ||||||    
T  5328943 atcttttgttatagaaataacttaaacgtaagcacttttatgat 5328900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 181
Target Start/End: Complemental strand, 27894122 - 27893977
Alignment:
Q  34 agcttttgatatgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagtttta 133  Q
    ||||| |||||||| |||||  ||||||| ||| ||||||||||| | | ||| ||| |||||||||||| || ||||||| ||| |||||  | ||| |    
T  27894122 agcttatgatatgtccataaactgttttcagcttattttcataagcttttcaagatatcttatgaaaaca-ctaatagtttatattaaaac--aatttga 27894026  T
Q  134 ctttattttat-ttttgttgtagaaataacttattcataagcacttata 181  Q
    ||||||||||| || ||||||||||||| ||||| ||||| | ||||||    
T  27894025 ctttattttatattctgttgtagaaatagcttatacataaacccttata 27893977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 111
Target Start/End: Original strand, 835265 - 835320
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| ||| ||||||||||||||||||| ||| ||||||||||| ||||||||    
T  835265 tgttttcagcttattttcataagttctccaagatagcttatgaaaactgcttatag 835320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 29274245 - 29274373
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgta 154  Q
    ||||||| |||||||  |||||| || ||| |||| ||||||||||||| |||||| || ||| |||||  | ||| |||||||||||| ||||| | ||    
T  29274245 tgttttctgctcattaccataagctcgccacaatatcttatgaaaacagtttatagcttatatgaaaac--aatttgactttattttatcttttgctata 29274342  T
Q  155 gaaataacttattcataagcacttatatgat 185  Q
    |||||| ||||| |||||||| || ||||||    
T  29274343 gaaatagcttatacataagcatttctatgat 29274373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 56 - 180
Target Start/End: Original strand, 9093572 - 9093695
Alignment:
Q  56 tgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgta 154  Q
    ||||||| ||| |||||| ||||||||| || | | |||||||||||||||||||| || ||  |||||  | ||| |||||||||||| ||||| | ||    
T  9093572 tgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaaaac--aatttaactttattttatcttttgatata 9093669  T
Q  155 gaaataacttattcataagcacttat 180  Q
    |||||| ||||| ||||||| |||||    
T  9093670 gaaatagcttatccataagcgcttat 9093695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 9109256 - 9109322
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||||  || ||||||||| |||||||||| ||  | |||||||||||||||||    
T  9109256 tgttcataagttgttttcaccttattttcataggttctccaaattagttaatgaaaacagcttatag 9109322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 185
Target Start/End: Complemental strand, 8010423 - 8010283
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    ||||||||||| | ||||| | | ||||  ||||||||||||  ||||||||| |||||||||||||  ||  |   |||  ||| || |||||||||||    
T  8010423 atgttcataagctattttcagtttatttctataagttctccaggataacttattaaaacagcttataacttaaaatgaaag-tagattgactttatttta 8010325  T
Q  144 tttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    || ||||| |||||||| ||||| | ||||||||||||||||    
T  8010324 ttgttgttatagaaatagcttatacctaagcacttatatgat 8010283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 125
Target Start/End: Original strand, 20861727 - 20861784
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||||||||||| || ||||||||  ||||||||||||||| || ||||||||||    
T  20861727 attttcataagttctacacaataacttgggaaaacagcttatagcttatataaaaaca 20861784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 222
Target Start/End: Complemental strand, 31461644 - 31461567
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgttta 222  Q
    ||||||| |||||||| ||||| ||||||||||||||  || |||| ||||| ||||||||   ||||||||||||||    
T  31461644 ttttgttatagaaatagcttatacataagcacttatacaataagtgcttataatataagcacttaattaagttgttta 31461567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 44 - 185
Target Start/End: Original strand, 32386110 - 32386243
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatttta 143  Q
    |||| |||||||||||||| ||| | ||||||||| | ||||  |||||| ||||||||||||||       |||||||||  |||||||||||||||||    
T  32386110 atgtccataagttgttttcagcttactttcataagctttccaggataactaatgaaaacagctta-------tataaaaac--agttttactttatttta 32386200  T
Q  144 t-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    | |||| |    |||||| ||||| ||||||||||||||||||    
T  32386201 tcttttctaagtgaaatagcttatacataagcacttatatgat 32386243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 55 - 111
Target Start/End: Original strand, 836556 - 836612
Alignment:
Q  55 ttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    |||||||| |||||||||||||||||| |||| ||| |||||||| |||||| ||||    
T  836556 ttgttttcagctcattttcataagttccccaagatagcttatgaacacagctaatag 836612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 127
Target Start/End: Complemental strand, 4246476 - 4246393
Alignment:
Q  44 atgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacata 127  Q
    |||| |||||| |||||||  || ||||| ||| | |||||| |||| |||||||||||||||||||| || ||| ||||||||    
T  4246476 atgtccataagctgttttcaacttatttttatatgctctccataatagcttatgaaaacagcttatagattatatgaaaacata 4246393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 6654652 - 6654544
Alignment:
Q  73 cataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatt-tttgttgtagaaataacttattcata 171  Q
    |||||| ||||||| ||| | ||| ||||||||||| |||||  | |||||||   ||| |||| |||||||| |||||| |||||||||||||| ||||    
T  6654652 cataagctctccaagatagcatattaaaacagcttaaagtttaaacaaaaacaa--tttgacttaattttattatttgttatagaaataacttatacata 6654555  T
Q  172 agcacttatat 182  Q
    ||| |||||||    
T  6654554 agcccttatat 6654544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 111
Target Start/End: Complemental strand, 8201275 - 8201232
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||    
T  8201275 attttcataagttctccaacataacttataaaaacaacttatag 8201232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 8420225 - 8420341
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttatt-tttgttgtagaaataacttat 166  Q
    |||| |||||| ||||||  ||| |||| || ||||||||||| ||| |||||| |||  |||| ||||||||||||  ||| ||  ||||||||||| |    
T  8420225 atttccataagctctccattatagcttacgagaacagcttatattttatataaacaca--gtttgactttattttatcatttattaaagaaataacttgt 8420322  T
Q  167 tcataagcacttatatgat 185  Q
     ||||||||||||||||||    
T  8420323 acataagcacttatatgat 8420341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 9604877 - 9604821
Alignment:
Q  82 tccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttatt 140  Q
    |||||||||||||||||||||||||||||| |  |||| ||| ||| ||||||||||||    
T  9604877 tccaaaataacttatgaaaacagcttatagct--tatacaaaaataattttactttatt 9604821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 79 - 184
Target Start/End: Complemental strand, 10016576 - 10016472
Alignment:
Q  79 ttctccaaaataacttatgaaaacagcttatagtttgtataaaaacatagttttactttattttat-ttttgttgtagaaataacttattcataagcact 177  Q
    |||||||| ||| |||||||||||||||||| | || ||| | |||  ||||| | |||||||||| ||||| | |||||||| ||||| |||||| |||    
T  10016576 ttctccaacatagcttatgaaaacagcttatggcttatatgagaac--agtttaaatttattttatcttttggtttagaaatagcttatacataaggact 10016479  T
Q  178 tatatga 184  Q
    |||||||    
T  10016478 tatatga 10016472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 14340931 - 14340986
Alignment:
Q  169 ataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatc 224  Q
    |||| |||||||||||| ||||||||| |||||||||   ||||||||||||||||    
T  14340931 ataaacacttatatgataagtgtttatgttataagcacttaattaagttgtttatc 14340986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 47 - 125
Target Start/End: Complemental strand, 14492365 - 14492287
Alignment:
Q  47 ttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaaca 125  Q
    ||||||| |||||||| ||| |||| || ||  |||| |  |||||||||||||||||||||||| |||||| ||||||    
T  14492365 ttcataaattgttttcagctgatttccacaaactctctaggataacttatgaaaacagcttatagcttgtatcaaaaca 14492287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 32975963 - 32975905
Alignment:
Q  127 agttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatga 184  Q
    ||||| |||||||||||| |||||||  ||||||||||||| ||||| |||||||||||    
T  32975963 agtttgactttattttatattttgttacagaaataacttatacataaacacttatatga 32975905  T

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Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 110
Target Start/End: Original strand, 33787773 - 33787815
Alignment:
Q  68 attttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||| |||||| ||||||| |||||||||||||||||||||||    
T  33787773 atttccataagctctccaagataacttatgaaaacagcttata 33787815  T

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Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 48 - 110
Target Start/End: Original strand, 34430469 - 34430531
Alignment:
Q  48 tcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    ||||||| | ||||| ||| |||||||||| |||||||| ||| |||||||||||| ||||||    
T  34430469 tcataagcttttttcagcttattttcataacttctccaagatagcttatgaaaacaccttata 34430531  T

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Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 45 - 111
Target Start/End: Original strand, 34910414 - 34910480
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatag 111  Q
    ||||||| |||||||||| ||| | ||||||||||||||||||| |  |||||| |||| |||||||    
T  34910414 tgttcatgagttgttttccgcttactttcataagttctccaaaacagattatgagaacaacttatag 34910480  T

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Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 2455324 - 2455259
Alignment:
Q  45 tgttcataagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttata 110  Q
    |||| ||||||||||||| ||| ||||||| || |||||||| ||  | |||||||||||||||||    
T  2455324 tgtttataagttgttttcagcttattttcacaacttctccaagattgcatatgaaaacagcttata 2455259  T

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Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 190
Target Start/End: Original strand, 26564892 - 26564949
Alignment:
Q  133 actttattttatttttgttgtagaaataacttattcataagcacttatatgattagtg 190  Q
    |||||||||| |||||||| |||||||  |||||  ||||||||||||||||| ||||    
T  26564892 actttattttgtttttgttatagaaatggcttatggataagcacttatatgataagtg 26564949  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 2034523 - 2034575
Alignment:
Q  126 tagttttactttattttatttttgttgtagaaataacttattcataagcactt 178  Q
    |||||| |||||||||||| ||||||||| ||| | ||||| |||||||||||    
T  2034523 tagtttgactttattttatctttgttgtaaaaacagcttatacataagcactt 2034575  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 2514688 - 2514628
Alignment:
Q  126 tagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||| |||||||||||| |||| || |||||||| ||||| |||||||||||| |||||    
T  2514688 tagtttgactttattttatcttttattatagaaatagcttatacataagcacttacatgat 2514628  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 51 - 123
Target Start/End: Original strand, 10616552 - 10616624
Alignment:
Q  51 taagttgttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaa 123  Q
    |||||||| ||| ||| ||||| ||||| ||||||||||| ||||| ||||| ||||||| ||| ||| ||||    
T  10616552 taagttgtgttcagcttatttttataagctctccaaaatagcttattaaaacggcttatattttatatgaaaa 10616624  T

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Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 228
Target Start/End: Complemental strand, 13907811 - 13907739
Alignment:
Q  156 aaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatctaaa 228  Q
    ||||||| |||||||||||| || ||||||||| | ||| | |||||||   |||||||| ||||||||||||    
T  13907811 aaataacctattcataagcatttttatgattagagcttaaactataagctgcaaattaagctgtttatctaaa 13907739  T

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Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 27727189 - 27727237
Alignment:
Q  156 aaataacttattcataagcacttatatgattagtgtttatattataagc 204  Q
    ||||||||| |  ||||||||||||||||| |||||||||| |||||||    
T  27727189 aaataacttgtatataagcacttatatgataagtgtttatactataagc 27727237  T

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Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 185
Target Start/End: Original strand, 31668789 - 31668829
Alignment:
Q  145 ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| |||||||| ||||| ||||||||||||||||||    
T  31668789 ttttgttatagaaatagcttatacataagcacttatatgat 31668829  T

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Target: scaffold0590 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Original strand, 1157 - 1218
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| |||||||||||| ||||||| |||||||| ||||| ||||||||||||||||||    
T  1157 atagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgat 1218  T

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Target: scaffold0275 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 185
Target Start/End: Complemental strand, 2818 - 2757
Alignment:
Q  125 atagttttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    ||||||| |||||||||||| ||||||| |||||||| ||||| ||||||||||||||||||    
T  2818 atagtttgactttattttatcttttgttatagaaatagcttatacataagcacttatatgat 2757  T

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Target: scaffold0100 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 227
Target Start/End: Complemental strand, 42599 - 42501
Alignment:
Q  130 tttactttattttat-ttttgttgtagaaataacttattcataagcacttatatgattagtgtttatattataagcataaaattaagttgtttatctaa 227  Q
    |||||| |||||||| ||||||| ||||||| |||||| |||||||||||||||||| | ||| | |  ||||||  |  |||||||||||||||||||    
T  42599 tttactctattttatcttttgttatagaaatgacttatacataagcacttatatgataaatgtgtctgctataagtgtttaattaagttgtttatctaa 42501  T

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Target: scaffold0654 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 6740 - 6795
Alignment:
Q  144 tttttgttgtagaaataacttattcataagcacttatatgattagtgtttatatta 199  Q
    |||||||| ||||||||  |||| |||||||||||||||||| |||| ||||||||    
T  6740 tttttgttatagaaatagtttatacataagcacttatatgataagtgcttatatta 6795  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 199
Target Start/End: Original strand, 116659 - 116714
Alignment:
Q  144 tttttgttgtagaaataacttattcataagcacttatatgattagtgtttatatta 199  Q
    |||||||| ||||||||  |||| |||||||||||||||||| |||| ||||||||    
T  116659 tttttgttatagaaatagtttatacataagcacttatatgataagtgcttatatta 116714  T

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Target: scaffold0221 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 112
Target Start/End: Complemental strand, 22283 - 22229
Alignment:
Q  58 ttttcggctcattttcataagttctccaaaataacttatgaaaacagcttatagt 112  Q
    ||||| ||| ||||||||||||| ||||| ||| ||||||| |||||||||||||    
T  22283 ttttcagcttattttcataagttttccaacatagcttatgataacagcttatagt 22229  T

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Target: scaffold0508 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 9878 - 9919
Alignment:
Q  144 tttttgttgtagaaataacttattcataagcacttatatgat 185  Q
    |||||||| |||||||||||||| ||||||||| ||||||||    
T  9878 tttttgttatagaaataacttatacataagcacctatatgat 9919  T

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Target: scaffold0167 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 123
Target Start/End: Complemental strand, 17312 - 17263
Alignment:
Q  74 ataagttctccaaaataacttatgaaaacagcttatagtttgtataaaaa 123  Q
    ||||||||||||| ||| |||||||||||| ||||||| |||||| ||||    
T  17312 ataagttctccaagatagcttatgaaaacaacttatagattgtattaaaa 17263  T

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Target: scaffold0349 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 204
Target Start/End: Original strand, 5768 - 5816
Alignment:
Q  156 aaataacttattcataagcacttatatgattagtgtttatattataagc 204  Q
    ||||||||| |  ||||||||||||||||| |||||||||| |||||||    
T  5768 aaataacttgtatataagcacttatatgataagtgtttatactataagc 5816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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