View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11152_high_17 (Length: 316)
Name: NF11152_high_17
Description: NF11152
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11152_high_17 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 7 - 316
Target Start/End: Original strand, 39897224 - 39897531
Alignment:
| Q |
7 |
tcgaagaatatgttttaaaaagaaaaggtcaagcattcattcatatgtagaattgtttaatctgacataaaaaggtaatagaatcatggacattgtgcta |
106 |
Q |
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| T |
39897224 |
tcgaagaatttgttttaaaaagaaaaggtcaagcattcattcatatatagaattgtttaatctgacataaaaaagtaatagaatcatggacattgtgcta |
39897323 |
T |
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| Q |
107 |
tgtctaggattaataaatatgatctatggttacttatactccagcttgccaatagtataatattatagtgcaagcaactaattttagctagaagaatact |
206 |
Q |
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| T |
39897324 |
tgtctaggattaataaatatgatctatggttacttatactccagcttgccaatagtataatattatagtgcaagcaactaattttagctagaagaatact |
39897423 |
T |
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| Q |
207 |
cctggttcaacctcannnnnnnnnacaaagaatggattatcttccagaggacagtgagtagttgtagaacctatttgaatctagtttgttaaaatatatt |
306 |
Q |
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| T |
39897424 |
cctggttcaacctcatttttttttacaaagaatggattatcttcc--aggacagtgagtagttgtagaacctatttgaatctagtttgttaaaatatatt |
39897521 |
T |
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| Q |
307 |
ttgaagttcc |
316 |
Q |
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| T |
39897522 |
ttgaagttcc |
39897531 |
T |
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