View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11154_high_14 (Length: 323)
Name: NF11154_high_14
Description: NF11154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11154_high_14 |
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Alignment Details
Target: chr5 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 18 - 314
Target Start/End: Original strand, 39727895 - 39728191
Alignment:
| Q |
18 |
gaaaccactttgttggaagtcctcccttagtgaaaacatttgcgaattgaagtccaaaagaccaggtcactatctaatttctccttgatgaagggtcaat |
117 |
Q |
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| T |
39727895 |
gaaaccactttgttggaagtcctcccttagtgaaaacatttgcgaattgaagtccaaaagaccaggtcactatctaatttctccttgatgaagggtcaat |
39727994 |
T |
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| Q |
118 |
gtatctatatgtatttgattctatcatgcgtgttgggttacatgcattgctaatggaagaagtattatcacagacagattagcctcatatgatctttgta |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39727995 |
gtatctatatgtatttgattctatcatgcgtgttgggttacatgcattgctaatggaagaagtattatcacagacagattagcctcatatgatctttgta |
39728094 |
T |
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| Q |
218 |
ctttatttcgaggtcatggagtatgatcttcatccataacacctcgtagatcctatgagccatatagctagagtttttctgcctttacacttcatct |
314 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
39728095 |
ctttatttcgaggtcatggagtatgatcttcatccataacacctcgtagatcctatgagccatatagctagagtttttctgcctttacacttgatct |
39728191 |
T |
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