View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11154_high_21 (Length: 209)
Name: NF11154_high_21
Description: NF11154
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11154_high_21 |
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Alignment Details
Target: chr1 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 10146064 - 10145902
Alignment:
| Q |
10 |
gagcagagagctatggagggaaagatgaaagtctgcattcgttaacttagataccactttcttctattttcttgaaaatattaatgattattttacaatt |
109 |
Q |
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| T |
10146064 |
gagcagagagctatggaaggaaagatgaaagtctgcattcgttaacttagataccactttcttctagtttcttgaaaatattaatgattattttacaatt |
10145965 |
T |
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| Q |
110 |
ttagattgttcacactcaagaaagcattatctatgcatccaacatagttagcgtttgcttgaa |
172 |
Q |
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| T |
10145964 |
ttagattgttcacactcaagaaagcattatctatgcatccaacatagttagcgtttgcttgaa |
10145902 |
T |
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