View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11155_low_12 (Length: 231)
Name: NF11155_low_12
Description: NF11155
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11155_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 134; Significance: 7e-70; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 13 - 217
Target Start/End: Complemental strand, 26616355 - 26616151
Alignment:
| Q |
13 |
ctgtgggttatacattgttgcctgtacccataataaattacaaattattaattaacctaatactnnnnnnnnnnttagtactaattttgtatgatcctaa |
112 |
Q |
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| T |
26616355 |
ctgtgggttatacattgttgcctgtactcataataaattacaaattattaattaacctaatactaaaaaaaaa-ttagtactaattttgtatgatcttaa |
26616257 |
T |
|
| Q |
113 |
atgattatgggagggaaatgcttacttgagggtacccgtattcaggagtgtaggtagggtagctgc-nnnnnnngttgaaaggaattaaattagaaagca |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
26616256 |
atgattatgggagggaaatgcttacttgagggtacccgtattcaggagtgtaggtagggtagctgcaaaaaaaagttgaaaggaattaaattagaaagca |
26616157 |
T |
|
| Q |
212 |
aaaaag |
217 |
Q |
| |
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|||||| |
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| T |
26616156 |
aaaaag |
26616151 |
T |
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