View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1115_low_1 (Length: 659)

Name: NF1115_low_1
Description: NF1115
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1115_low_1
NF1115_low_1
[»] chr4 (51 HSPs)
chr4 (296-647)||(39089726-39090077)
chr4 (30-299)||(39090137-39090415)
chr4 (33-267)||(39080804-39081050)
chr4 (575-647)||(32648909-32648983)
chr4 (561-647)||(40422963-40423052)
chr4 (589-647)||(39421917-39421976)
chr4 (589-647)||(51431046-51431105)
chr4 (575-647)||(16535793-16535867)
chr4 (575-647)||(36151275-36151349)
chr4 (567-647)||(13984871-13984952)
chr4 (567-647)||(42954710-42954791)
chr4 (588-647)||(17873298-17873358)
chr4 (588-647)||(23708238-23708298)
chr4 (588-647)||(41844537-41844597)
chr4 (589-647)||(3126932-3126991)
chr4 (589-647)||(7182111-7182170)
chr4 (589-647)||(21730247-21730306)
chr4 (589-647)||(31530121-31530180)
chr4 (589-647)||(32060748-32060807)
chr4 (589-647)||(38317148-38317207)
chr4 (589-647)||(48830734-48830793)
chr4 (589-647)||(49936604-49936663)
chr4 (575-647)||(904299-904373)
chr4 (575-644)||(6836505-6836575)
chr4 (590-647)||(24291487-24291545)
chr4 (575-647)||(28880093-28880167)
chr4 (609-647)||(32948467-32948505)
chr4 (590-647)||(38366129-38366187)
chr4 (561-647)||(46669835-46669924)
chr4 (590-647)||(47669912-47669970)
chr4 (551-631)||(15451218-15451299)
chr4 (568-647)||(52594524-52594605)
chr4 (565-647)||(9046310-9046394)
chr4 (592-647)||(37756646-37756702)
chr4 (581-634)||(38957455-38957510)
chr4 (575-646)||(4441927-4442001)
chr4 (589-647)||(41363732-41363791)
chr4 (589-647)||(49404543-49404602)
chr4 (553-647)||(27485145-27485242)
chr4 (577-647)||(31340869-31340942)
chr4 (590-647)||(35959283-35959341)
chr4 (575-632)||(17115043-17115100)
chr4 (562-634)||(21443138-21443211)
chr4 (562-634)||(36886841-36886914)
chr4 (577-647)||(15498701-15498773)
chr4 (553-647)||(24662630-24662726)
chr4 (561-647)||(30307471-30307558)
chr4 (562-629)||(31418848-31418916)
chr4 (609-645)||(36553719-36553755)
chr4 (575-634)||(46176842-46176902)
chr4 (588-647)||(53013689-53013749)
[»] chr3 (41 HSPs)
chr3 (550-647)||(4247219-4247318)
chr3 (553-647)||(32858932-32859027)
chr3 (561-647)||(46891488-46891576)
chr3 (566-647)||(27681905-27681987)
chr3 (568-647)||(30121420-30121501)
chr3 (589-647)||(47789366-47789425)
chr3 (575-647)||(30131791-30131865)
chr3 (568-647)||(23163625-23163706)
chr3 (575-646)||(31651350-31651423)
chr3 (588-647)||(49860938-49860998)
chr3 (589-647)||(2420761-2420820)
chr3 (589-647)||(3043048-3043107)
chr3 (589-647)||(7302186-7302245)
chr3 (551-647)||(13638528-13638627)
chr3 (562-647)||(15499191-15499278)
chr3 (589-647)||(25428770-25428829)
chr3 (589-647)||(38526255-38526314)
chr3 (589-647)||(41961897-41961956)
chr3 (589-647)||(43007442-43007501)
chr3 (589-647)||(47434214-47434273)
chr3 (589-647)||(55439686-55439745)
chr3 (551-634)||(29623352-29623436)
chr3 (553-647)||(1132818-1132914)
chr3 (560-647)||(32720972-32721060)
chr3 (588-647)||(38515339-38515399)
chr3 (562-647)||(50201667-50201757)
chr3 (589-647)||(7661138-7661197)
chr3 (589-647)||(17642691-17642750)
chr3 (589-647)||(43237392-43237451)
chr3 (589-647)||(47714593-47714652)
chr3 (589-647)||(34306700-34306758)
chr3 (589-644)||(49682921-49682978)
chr3 (575-645)||(3990929-3991001)
chr3 (568-647)||(42583195-42583278)
chr3 (561-609)||(48951934-48951983)
chr3 (589-634)||(55445023-55445068)
chr3 (575-634)||(30697487-30697547)
chr3 (561-647)||(35283189-35283277)
chr3 (592-647)||(36796526-36796582)
chr3 (588-647)||(46017307-46017367)
chr3 (551-647)||(54089335-54089434)
[»] chr5 (28 HSPs)
chr5 (575-647)||(9684696-9684770)
chr5 (553-647)||(19389711-19389807)
chr5 (561-647)||(9096413-9096500)
chr5 (589-647)||(33718283-33718342)
chr5 (575-647)||(35704951-35705025)
chr5 (575-647)||(35868932-35869006)
chr5 (575-646)||(6373240-6373315)
chr5 (589-647)||(32760858-32760917)
chr5 (589-647)||(38302278-38302337)
chr5 (588-645)||(4648906-4648964)
chr5 (552-647)||(4841591-4841688)
chr5 (551-639)||(28523729-28523818)
chr5 (588-647)||(13293903-13293963)
chr5 (588-647)||(27480091-27480151)
chr5 (575-647)||(39011934-39012006)
chr5 (589-647)||(2021082-2021141)
chr5 (593-647)||(6491286-6491341)
chr5 (562-647)||(17668026-17668113)
chr5 (589-647)||(35701505-35701564)
chr5 (589-647)||(41695079-41695138)
chr5 (567-647)||(3081229-3081311)
chr5 (580-633)||(7663865-7663919)
chr5 (590-647)||(17092999-17093057)
chr5 (590-647)||(28154792-28154850)
chr5 (561-594)||(12063873-12063906)
chr5 (562-634)||(31632950-31633023)
chr5 (588-632)||(33682490-33682534)
chr5 (553-647)||(35042306-35042402)
[»] chr1 (49 HSPs)
chr1 (561-647)||(5883495-5883582)
chr1 (575-646)||(30543268-30543341)
chr1 (588-647)||(2925854-2925914)
chr1 (573-647)||(33579355-33579431)
chr1 (589-647)||(13061317-13061376)
chr1 (589-647)||(32299204-32299263)
chr1 (589-647)||(32300157-32300216)
chr1 (575-647)||(41432667-41432741)
chr1 (588-647)||(13255446-13255506)
chr1 (553-647)||(26345727-26345823)
chr1 (553-647)||(9312858-9312952)
chr1 (589-647)||(11017703-11017762)
chr1 (589-647)||(23871383-23871442)
chr1 (589-647)||(33991643-33991702)
chr1 (581-647)||(36269845-36269912)
chr1 (589-647)||(42488547-42488606)
chr1 (575-647)||(52073363-52073437)
chr1 (589-647)||(15463912-15463972)
chr1 (549-633)||(38958068-38958153)
chr1 (553-647)||(50162237-50162336)
chr1 (575-645)||(1278573-1278645)
chr1 (588-647)||(17675298-17675358)
chr1 (596-647)||(36668576-36668628)
chr1 (561-647)||(50097716-50097804)
chr1 (561-647)||(51303066-51303154)
chr1 (589-647)||(2175436-2175495)
chr1 (574-647)||(9314959-9315034)
chr1 (589-647)||(27500086-27500145)
chr1 (562-647)||(34551980-34552067)
chr1 (575-647)||(35604174-35604248)
chr1 (589-647)||(39889578-39889637)
chr1 (582-647)||(43036235-43036302)
chr1 (589-647)||(47905609-47905668)
chr1 (589-647)||(50247698-50247757)
chr1 (589-647)||(50402843-50402902)
chr1 (590-647)||(1523697-1523755)
chr1 (561-645)||(25561209-25561295)
chr1 (590-647)||(26757076-26757134)
chr1 (551-627)||(718455-718532)
chr1 (597-647)||(1063437-1063489)
chr1 (591-647)||(1688139-1688196)
chr1 (591-647)||(14153213-14153270)
chr1 (589-626)||(26940703-26940740)
chr1 (575-643)||(34738422-34738491)
chr1 (590-634)||(9173670-9173714)
chr1 (561-632)||(28748308-28748380)
chr1 (561-647)||(43530189-43530277)
chr1 (561-647)||(50084229-50084317)
chr1 (561-647)||(50476630-50476718)
[»] chr7 (28 HSPs)
chr7 (589-647)||(23620714-23620772)
chr7 (589-647)||(41002171-41002230)
chr7 (588-646)||(42220143-42220202)
chr7 (589-647)||(43188959-43189018)
chr7 (561-647)||(4787893-4787982)
chr7 (568-647)||(33810110-33810191)
chr7 (561-647)||(22556595-22556683)
chr7 (589-647)||(5967973-5968032)
chr7 (589-647)||(42620272-42620331)
chr7 (589-647)||(43665089-43665148)
chr7 (589-647)||(47275922-47275981)
chr7 (575-647)||(24923299-24923373)
chr7 (575-646)||(7667070-7667143)
chr7 (576-647)||(33187753-33187826)
chr7 (589-647)||(36747397-36747457)
chr7 (562-634)||(43230091-43230164)
chr7 (553-647)||(14676332-14676428)
chr7 (553-647)||(23465883-23465979)
chr7 (588-647)||(28437461-28437521)
chr7 (588-647)||(33113558-33113618)
chr7 (588-647)||(33406551-33406611)
chr7 (588-643)||(34651972-34652028)
chr7 (562-647)||(36845333-36845420)
chr7 (590-647)||(38235896-38235954)
chr7 (561-647)||(3363709-3363797)
chr7 (573-647)||(32650294-32650370)
chr7 (575-634)||(38138047-38138107)
chr7 (577-647)||(42112866-42112938)
[»] chr2 (45 HSPs)
chr2 (551-647)||(36030895-36030993)
chr2 (568-647)||(8990861-8990942)
chr2 (588-647)||(3038866-3038926)
chr2 (561-647)||(16625696-16625783)
chr2 (562-647)||(30523379-30523466)
chr2 (567-647)||(4666237-4666319)
chr2 (577-643)||(26599162-26599230)
chr2 (588-647)||(32243577-32243637)
chr2 (588-647)||(36567197-36567257)
chr2 (588-647)||(44020441-44020501)
chr2 (589-647)||(4042066-4042125)
chr2 (589-647)||(8410850-8410909)
chr2 (589-647)||(12963891-12963950)
chr2 (589-647)||(13765859-13765918)
chr2 (589-647)||(25955754-25955813)
chr2 (589-647)||(38293990-38294049)
chr2 (589-647)||(40357559-40357618)
chr2 (552-647)||(41503256-41503354)
chr2 (588-647)||(5972315-5972376)
chr2 (575-647)||(11950100-11950174)
chr2 (575-647)||(31550167-31550241)
chr2 (583-647)||(3022797-3022862)
chr2 (591-647)||(14008251-14008308)
chr2 (588-644)||(18018517-18018574)
chr2 (550-634)||(29880880-29880965)
chr2 (562-634)||(30265251-30265324)
chr2 (588-647)||(726050-726110)
chr2 (601-647)||(3119784-3119831)
chr2 (589-647)||(10165515-10165574)
chr2 (589-647)||(18826146-18826205)
chr2 (609-647)||(36574388-36574427)
chr2 (589-647)||(38023367-38023426)
chr2 (590-647)||(8555697-8555755)
chr2 (561-647)||(16465049-16465138)
chr2 (590-647)||(37217057-37217115)
chr2 (567-632)||(43100465-43100531)
chr2 (589-634)||(7184237-7184282)
chr2 (575-647)||(7310144-7310217)
chr2 (575-647)||(16518995-16519068)
chr2 (568-647)||(31899254-31899335)
chr2 (589-634)||(32950992-32951037)
chr2 (585-645)||(42946640-42946701)
chr2 (575-630)||(1726020-1726073)
chr2 (552-647)||(13767520-13767615)
chr2 (588-647)||(44656669-44656729)
[»] scaffold0717 (1 HSPs)
scaffold0717 (588-647)||(1680-1740)
[»] chr8 (34 HSPs)
chr8 (569-647)||(38404443-38404523)
chr8 (589-647)||(13865012-13865071)
chr8 (589-647)||(34272617-34272676)
chr8 (571-647)||(4137808-4137888)
chr8 (561-649)||(13258586-13258676)
chr8 (575-647)||(13537444-13537518)
chr8 (575-647)||(13626992-13627066)
chr8 (575-647)||(35353930-35354002)
chr8 (575-643)||(35376544-35376612)
chr8 (589-647)||(3404494-3404553)
chr8 (562-647)||(15108156-15108243)
chr8 (589-647)||(25033482-25033541)
chr8 (589-647)||(33230967-33231026)
chr8 (589-647)||(34349817-34349876)
chr8 (589-647)||(36102810-36102869)
chr8 (589-647)||(37659451-37659510)
chr8 (589-634)||(11961441-11961486)
chr8 (589-644)||(4734416-4734472)
chr8 (592-647)||(29612093-29612149)
chr8 (573-647)||(35856433-35856509)
chr8 (589-647)||(2474687-2474746)
chr8 (589-647)||(11876934-11876993)
chr8 (589-647)||(11891941-11892000)
chr8 (589-647)||(36906289-36906348)
chr8 (609-647)||(41455361-41455400)
chr8 (575-647)||(3394063-3394137)
chr8 (562-647)||(22330792-22330878)
chr8 (561-640)||(27085458-27085539)
chr8 (575-647)||(34148485-34148558)
chr8 (561-647)||(6839690-6839780)
chr8 (554-634)||(12595959-12596040)
chr8 (561-647)||(1839711-1839799)
chr8 (567-638)||(8236013-8236087)
chr8 (562-634)||(40984968-40985039)
[»] chr6 (18 HSPs)
chr6 (553-644)||(26683422-26683513)
chr6 (551-646)||(6695398-6695496)
chr6 (561-647)||(8439287-8439374)
chr6 (562-647)||(17444044-17444130)
chr6 (588-647)||(23095047-23095107)
chr6 (588-647)||(26574314-26574374)
chr6 (589-647)||(5825434-5825493)
chr6 (589-647)||(24734982-24735041)
chr6 (589-647)||(26481051-26481110)
chr6 (589-647)||(34914729-34914788)
chr6 (590-647)||(29241754-29241812)
chr6 (575-647)||(33212422-33212496)
chr6 (575-647)||(33677125-33677196)
chr6 (574-647)||(22817245-22817320)
chr6 (553-647)||(33939007-33939102)
chr6 (575-632)||(4089302-4089360)
chr6 (592-647)||(1029395-1029451)
chr6 (561-647)||(9104837-9104924)
[»] scaffold1562 (1 HSPs)
scaffold1562 (588-647)||(242-302)
[»] scaffold1158 (1 HSPs)
scaffold1158 (588-647)||(2291-2351)
[»] scaffold0636 (1 HSPs)
scaffold0636 (588-647)||(8493-8553)
[»] scaffold0952 (1 HSPs)
scaffold0952 (589-647)||(3590-3649)
[»] scaffold0028 (1 HSPs)
scaffold0028 (589-647)||(35375-35434)
[»] scaffold0007 (1 HSPs)
scaffold0007 (592-647)||(68623-68678)
[»] scaffold0927 (1 HSPs)
scaffold0927 (575-647)||(2815-2889)
[»] scaffold1763 (1 HSPs)
scaffold1763 (553-647)||(487-583)
[»] scaffold0245 (1 HSPs)
scaffold0245 (575-645)||(4250-4322)
[»] scaffold0229 (1 HSPs)
scaffold0229 (575-645)||(4581-4653)
[»] scaffold0078 (1 HSPs)
scaffold0078 (590-646)||(4381-4437)


Alignment Details
Target: chr4 (Bit Score: 288; Significance: 1e-161; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 296 - 647
Target Start/End: Complemental strand, 39090077 - 39089726
Alignment:
Q  296 tgttctgtaattggatttaaagtttttctagcttgatcttgtttaagatatgcttaattaggtgaacaatgtttaaggatatgtcacttttgcatttccc 395  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||    
T  39090077 tgttctgtaattggatttaaagtttttctagcttgatcttgtttaagatatgctta----ggtgaacaatgtttaaggatatgtcacttttgcatttccc 39089982  T
Q  396 tttaattatttggttacttgttgacatgttggtgtgtatctgaaattttaaaaatcaatgtatatttgtcaaagttattccacctaggatattaaggttt 495  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||    
T  39089981 tttaattatttggttacttgttgacatgttggtgtgtatctgaaattttaaaaatcaatgtatatttgtcaaagttattccacataggatattaagattt 39089882  T
Q  496 tgattgagagtttgaaggggaggaaagagctttggaaagtggaaaatac--agagaagaaaaatgatgaaatttttcataatttttgaaagagta-tttt 592  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||||||| ||||    
T  39089881 tgattgagagtttgaaggggaggaaagagctttggaaagtggaaaatactgagagaaaaaaaatgacgaaatttttcataatttttgaaagagtattttt 39089782  T
Q  593 ttagaaaatgacaaag-taatacttatgattaatatatttttattttaagaatatt 647  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  39089781 ttagagaatgacaaagttaatgcttatgattaatatatttttattttaagaatatt 39089726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 30 - 299
Target Start/End: Complemental strand, 39090415 - 39090137
Alignment:
Q  30 agtgtcaattaacttcaaaccatgccactaaattgaatccctgctacttgatgtaattgaatcaagaagataatgtatatggatgatgataagtnnnnnn 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  39090415 agtgtcaattaacttcaaaccatgccactaaattgaatccctgctacttgatgtaattgaatcaagaagataatgtatatggatgatgataagtaaaaaa 39090316  T
Q  130 nnt----------aatgtaagtagaagcagttgaggtagaaatcaaagagaggtgaaatggtaggaaatcaattaaagagattgagggttgagggtagaa 219  Q
      |          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| | |    
T  39090315 aatctattgaacaaatgtaagtagaagcagttgaggtagaaatcaaagagaggtgaaatggtaggaaatcatttaaagagattgagagttgagggt-gga 39090217  T
Q  220 actcaagaaaaattatattgaaattgatgatgaattgatacaactatacaaatatcacagaaaataaagaaactcctgtt 299  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  39090216 actcaagaaaaagtatattgaaattgatgatgaagtgatacaactatacaaatatcacaaaaaataaagaaactcctgtt 39090137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 33 - 267
Target Start/End: Complemental strand, 39081050 - 39080804
Alignment:
Q  33 gtcaattaacttcaaaccatgccactaaattgaatccctgctacttgatgtaattgaatcaagaagataatgtatatggatgatgataagtnnnnnnnnt 132  Q
    |||||||||||||||| |||||||| ||||||||||| |||||||||||||||||||||  ||||||||||||||||| |||||| |||||             
T  39081050 gtcaattaacttcaaatcatgccaccaaattgaatccatgctacttgatgtaattgaatatagaagataatgtatatgaatgatggtaagtgaaaaaaaa 39080951  T
Q  133 -----------aatgtaagtagaagcagttgaggtagaaatcaaagagaggtgaaatggtaggaaatcaattaaagagattgagggttgagggtagaaac 221  Q
               |||||||||| ||||||||||||||| ||||||||||| ||||||||| | ||||||| ||||||||||||||  |||||||||| |||    
T  39080950 tctactgaacaaatgtaagtaaaagcagttgaggtaggaatcaaagagatgtgaaatgggatgaaatcatttaaagagattgagaattgagggtag-aac 39080852  T
Q  222 tcaagaaaaattatattgaaattgatgatga--attgatacaactata 267  Q
    ||||||||||||||||| |||||||| ||||  | |||||||||||||    
T  39080851 tcaagaaaaattatattaaaattgataatgatcagtgatacaactata 39080804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 32648909 - 32648983
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||| | ||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  32648909 tttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatatttttaattttaagaatatt 32648983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 40422963 - 40423052
Alignment:
Q  561 gaaatttttcataatttttgaaagagta--ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| ||||||||||||||||  ||||||||| | ||| ||| ||||| ||||||||||||||||||| ||||||||||||||    
T  40422963 gaaatctttcacaatttttgaaagagtattttttttagagagtgataaattaatatttatgattaatatatttttaattttaagaatatt 40423052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 39421976 - 39421917
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||| |||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  39421976 ttttttagaatatgacaaactaatactcatgattaatatatttttaattttaagaatatt 39421917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 51431105 - 51431046
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||||||    
T  51431105 ttttttagagaatgataaagtaatatttatgattaatatatttttaattttaagaatatt 51431046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 16535867 - 16535793
Alignment:
Q  575 tttttgaaagag-tattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||| ||||||||||| ||||| ||| |||||||||| |||||||| ||||| ||||||||||||||    
T  16535867 tttttgaaagagctattttttagagaatgataaactaatacttataattaatatctttttaattttaagaatatt 16535793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 36151275 - 36151349
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||  ||| ||||||||||||||    
T  36151275 tttttgaaagaatagttttttagaaaatgataaactaatacttatgattaatatacatttaattttaagaatatt 36151349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 567 - 647
Target Start/End: Original strand, 13984871 - 13984952
Alignment:
Q  567 tttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatat-atttttattttaagaatatt 647  Q
    ||||||| ||||||||||||||||||||||| | | | ||| |||| ||||||||||||||  |||||||||||| ||||||    
T  13984871 tttcatattttttgaaagagtattttttagagagtaataaattaatgcttatgattaatatcttttttattttaaaaatatt 13984952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 567 - 647
Target Start/End: Complemental strand, 42954791 - 42954710
Alignment:
Q  567 tttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||||||||||||| | ||||||| | ||| ||| ||||  ||||||||||||||||||| ||||||||||||||    
T  42954791 tttcacaatttttgaaagagtttcttttagagagtgataaactaatgtttatgattaatatatttttgattttaagaatatt 42954710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 17873358 - 17873298
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  17873358 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 17873298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 23708298 - 23708238
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  23708298 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 23708238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 41844597 - 41844537
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  41844597 attttttagagaatgataaattaatacttatgattaatatacttttaattttaagaatatt 41844537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 3126932 - 3126991
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  3126932 ttttttagataatgataaactaatacttatgattaatatacttttaattttaagaatatt 3126991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 7182111 - 7182170
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  7182111 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 7182170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 21730247 - 21730306
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||| |||| |||||||||    
T  21730247 ttttttagagaatgataaactaatacttatgattaatatatttttaatttcaagaatatt 21730306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 31530180 - 31530121
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  31530180 ttttttagagaatgataaattaatacttatgattaatatacttttaattttaagaatatt 31530121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 32060807 - 32060748
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  32060807 ttttttagagaatgataaattaatacttatgattaatatacttttaattttaagaatatt 32060748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 38317148 - 38317207
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  38317148 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 38317207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 48830734 - 48830793
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  48830734 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 48830793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 49936663 - 49936604
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| ||||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  49936663 ttttttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatatt 49936604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 904373 - 904299
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||| || ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||| ||||||    
T  904373 tttttgaaagaatagttttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatatt 904299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 644
Target Start/End: Complemental strand, 6836575 - 6836505
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaat 644  Q
    ||||||||||||| ||| ||||  ||||| ||| |||| |||||||||||||||||||| |||||||||||    
T  6836575 tttttgaaagagtttttgttagtgaatgataaattaatgcttatgattaatatatttttaattttaagaat 6836505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 24291545 - 24291487
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  24291545 tttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 24291487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 28880167 - 28880093
Alignment:
Q  575 tttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||||||||| ||| | ||| ||| ||||  ||||||||||||||||||| ||||||||||||||    
T  28880167 tttttgaaagagtatttttttagagagtgataaattaatgtttatgattaatatatttttaattttaagaatatt 28880093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 609 - 647
Target Start/End: Original strand, 32948467 - 32948505
Alignment:
Q  609 taatacttatgattaatatatttttattttaagaatatt 647  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  32948467 taatacttatgattaatatacttttattttaagaatatt 32948505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 38366187 - 38366129
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| ||||| ||| ||||||||||||||||||||||||| ||||||| ||||||    
T  38366187 tttttagagaatgataaactaatacttatgattaatatatttttaattttaaaaatatt 38366129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 46669835 - 46669924
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt--agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | ||||| ||||||||||||||  ||| ||||| ||| | || |||||||||||||||||||| ||||||||||||||    
T  46669835 gaaatctttcacatttttttaaagagtattttttttagagaatgataaatttatgcttatgattaatatatttttaattttaagaatatt 46669924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 47669970 - 47669912
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  47669970 tttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 47669912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 631
Target Start/End: Original strand, 15451218 - 15451299
Alignment:
Q  551 gaaaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattt 631  Q
    |||||||| | |||| ||||| | |||||||||||||| ||||||| | ||||| ||| |||| ||||||||||||||||||    
T  15451218 gaaaaatggtaaaatctttcacattttttgaaagagtaattttttaaataatgataaattaatgcttatgattaatatattt 15451299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 52594524 - 52594605
Alignment:
Q  568 ttcataatttttgaaagagtatttt-ttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| |||||||||||  | ||| ||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  52594524 ttcatattttttgaaagaacagtttcttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 52594605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 565 - 647
Target Start/End: Original strand, 9046310 - 9046394
Alignment:
Q  565 tttttcataatttttgaaagagtattttt-tagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||||||||||||||||| || | || ||| ||  |||  |||||||||||||| |||||| ||||||||||||    
T  9046310 tttttcataatttttgaaagagtatttttctaaagaacgactaatcaatgattatgattaatatattttttactttaagaatatt 9046394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 592 - 647
Target Start/End: Original strand, 37756646 - 37756702
Alignment:
Q  592 tttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  37756646 tttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 37756702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 581 - 634
Target Start/End: Original strand, 38957455 - 38957510
Alignment:
Q  581 aaagagtatttttt--agaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||||||||||  ||| ||||| ||| ||||||||||||||||||||||||||    
T  38957455 aaagagtattttttgtagagaatgataaactaatacttatgattaatatattttta 38957510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 646
Target Start/End: Original strand, 4441927 - 4442001
Alignment:
Q  575 tttttgaaagagtatt--ttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatat 646  Q
    ||||| ||||||||||  ||||||| | ||| ||| |||| |||||||||||||||||||| |||||||||||||    
T  4441927 tttttaaaagagtattatttttagagagtgataaattaatgcttatgattaatatatttttaattttaagaatat 4442001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 41363732 - 41363791
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||| | ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  41363732 ttttttacagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 41363791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 49404543 - 49404602
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| || ||||||||||||||||| |||| ||||||||||||||    
T  49404543 ttttttagagaatgataaactattacttatgattaatatacttttaattttaagaatatt 49404602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 27485145 - 27485242
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagtattt--tttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| | |||| ||||| | ||||| |||||||| ||  |||||||||||| |||  ||| |||||||||||||||||||| |||||| |||||||    
T  27485145 aaaatggtaaaatctttcacatttttttaaagagtaattattttagaaaatgataaatgaatgcttatgattaatatatttttaattttatgaatatt 27485242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 577 - 647
Target Start/End: Complemental strand, 31340942 - 31340869
Alignment:
Q  577 tttgaaagagtatttttt--agaaaatgacaaagtaatacttatgattaatatat-ttttattttaagaatatt 647  Q
    ||||||||||||||||||  ||| ||||| ||| ||  |||||| |||||||||| ||||||||||||||||||    
T  31340942 tttgaaagagtattttttttagagaatgataaattagaacttataattaatatattttttattttaagaatatt 31340869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 35959341 - 35959283
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| ||||| |||||||| ||||||||| |||||||||| || |||||||||||    
T  35959341 tttttagagaatgataaagtaatgcttatgattcatatatttttaatattaagaatatt 35959283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 632
Target Start/End: Original strand, 17115043 - 17115100
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatatttt 632  Q
    ||||| |||||||| |||||| | ||||| ||| ||||||||| ||||||||||||||    
T  17115043 tttttaaaagagtaatttttaaagaatgataaattaatacttaagattaatatatttt 17115100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 21443211 - 21443138
Alignment:
Q  562 aaatttttcataatttttgaaagagtat-tttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    |||| ||||||| ||||||||||||||| ||||||| |  ||| ||| |||| ||||| |||||||||||||||    
T  21443211 aaatctttcatattttttgaaagagtatgtttttagtaggtgataaattaatgcttattattaatatattttta 21443138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 36886914 - 36886841
Alignment:
Q  562 aaatttttcataatttttgaaagagt-attttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    |||| ||||| | ||||||| ||||| ||||| |||||||||| |||  |||||||||||||||| ||||||||    
T  36886914 aaatatttcaaattttttgagagagtgattttatagaaaatgataaataaatacttatgattaatgtattttta 36886841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 577 - 647
Target Start/End: Original strand, 15498701 - 15498773
Alignment:
Q  577 tttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||| ||||||| | ||||| ||| |||  |||||||||||||||||||| ||||| ||||||||    
T  15498701 tttgaaagagtaattttttaaataatgataaattaaagcttatgattaatatatttttaatttttagaatatt 15498773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 24662630 - 24662726
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| | |||| ||||| | ||| |||||||||| ||||||||| ||||| |||  ||| |||||||||||||| ||||| ||||||| ||||||    
T  24662630 aaaatggtaaaatctttcacattttctgaaagagtaattttttagagaatgataaatcaatgcttatgattaatatttttttaattttaaaaatatt 24662726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 30307558 - 30307471
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | ||||| || ||||||||||| ||| | ||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  30307558 gaaatctttcacatttttttaatgagtatttttttagagagtgaaaaa-taatgcttatgattaatatatttttaattttaagaatatt 30307471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 562 - 629
Target Start/End: Original strand, 31418848 - 31418916
Alignment:
Q  562 aaatttttcataatttttgaaagagtattt-tttagaaaatgacaaagtaatacttatgattaatatat 629  Q
    |||| ||||| | ||||||||||||||||| |||||| | ||| ||| |||| ||||||||||||||||    
T  31418848 aaatctttcacagtttttgaaagagtatttgtttagagagtgataaattaatgcttatgattaatatat 31418916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 609 - 645
Target Start/End: Original strand, 36553719 - 36553755
Alignment:
Q  609 taatacttatgattaatatatttttattttaagaata 645  Q
    |||| ||||||||||||||||||| ||||||||||||    
T  36553719 taattcttatgattaatatattttaattttaagaata 36553755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 634
Target Start/End: Original strand, 46176842 - 46176902
Alignment:
Q  575 tttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    |||||||||||||||||||| ||| ||||| ||| ||||  |||||||| |||||||||||    
T  46176842 tttttgaaagagtatttttttagagaatgataaactaatggttatgattcatatattttta 46176902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 53013749 - 53013689
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||| ||||| ||| ||||  ||||||||||||||||||| ||||||| ||||||    
T  53013749 attttttagagaatgataaattaatgtttatgattaatatatttttaattttaacaatatt 53013689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 4e-18; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 550 - 647
Target Start/End: Complemental strand, 4247318 - 4247219
Alignment:
Q  550 agaaaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| | |||| ||||||| ||||| |||||||| ||||||||| ||||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  4247318 agaaaaatggtaaaatctttcatatttttttaaagagtaattttttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatatt 4247219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 32859027 - 32858932
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| | |||| ||||| | |||||||||||||| |||||||| ||||| ||| ||||||||| ||||||||||||||| ||||||||||||||    
T  32859027 aaaatggtaaaatctttcacattttttgaaagagtaatttttagagaatgataaattaatacttacgattaatatatttttaattttaagaatatt 32858932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 46891576 - 46891488
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||||| ||||||||||| |||||||| ||| | ||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  46891576 gaaatctttcatattttttgaaagattatttttttagagactgataaattaatacttatgattaatatatttttaattttaagaatatt 46891488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 566 - 647
Target Start/End: Complemental strand, 27681987 - 27681905
Alignment:
Q  566 ttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| ||||||||| | ||||||||||| | ||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  27681987 ttttcatattttttgaaaaaatattttttagagagtgataaattaatgcttatgattaatatatttttaattttaagaatatt 27681905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 30121420 - 30121501
Alignment:
Q  568 ttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| |||||||||||| | ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  30121420 ttcatattttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 30121501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 47789366 - 47789425
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  47789366 ttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatatt 47789425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 30131791 - 30131865
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||||| | ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  30131791 tttttgaaagagcagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 30131865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 568 - 647
Target Start/End: Complemental strand, 23163706 - 23163625
Alignment:
Q  568 ttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| |||||||||||  | ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  23163706 ttcatattttttgaaagaacaattttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 23163625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 646
Target Start/End: Original strand, 31651350 - 31651423
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatat 646  Q
    |||||||||||||| ||||||||| ||||  ||| |||| |||||||||||||||||||| |||||||||||||    
T  31651350 tttttgaaagagtaattttttagagaatgttaaattaatgcttatgattaatatatttttaattttaagaatat 31651423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 49860998 - 49860938
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  49860998 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 49860938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 2420820 - 2420761
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  2420820 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 2420761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 3043048 - 3043107
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  3043048 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 3043107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 7302245 - 7302186
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttta-ttttaagaatatt 647  Q
    ||||||||| ||||| |||  ||||||||||||||||||||||||| |||||||||||||    
T  7302245 ttttttagagaatgataaatcaatacttatgattaatatatttttagttttaagaatatt 7302186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 551 - 647
Target Start/End: Complemental strand, 13638627 - 13638528
Alignment:
Q  551 gaaaaatgatgaaatttttcataatttttgaaa-gagtat-tttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| | |||| ||||| ||||||| ||| |||||  |||||||| ||||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  13638627 gaaaaatggtcaaatctttcacaattttttaaaagagtacatttttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatatt 13638528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 647
Target Start/End: Original strand, 15499191 - 15499278
Alignment:
Q  562 aaatttttcataatttttgaaagagtat-tttttagaaaatgacaaagtaatacttatgattaatatatttt-tattttaagaatatt 647  Q
    |||| ||||| | ||||||||| ||||  |||||||| ||||| ||| ||||||||||||||||||||||||  ||||||||||||||    
T  15499191 aaatctttcacattttttgaaatagtaaatttttagagaatgataaaataatacttatgattaatatattttaaattttaagaatatt 15499278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 25428829 - 25428770
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  25428829 ttttttagagaatgataaaataatacttatgattaatatacttttaattttaagaatatt 25428770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 38526314 - 38526255
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  38526314 ttttttagacaatgataaactaatacttatgattaatatacttttaattttaagaatatt 38526255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 41961897 - 41961956
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  41961897 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 41961956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 43007442 - 43007501
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  43007442 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 43007501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 47434214 - 47434273
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  47434214 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 47434273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 55439745 - 55439686
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  55439745 ttttttagataatgataaactaatacttatgattaatatacttttaattttaagaatatt 55439686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 634
Target Start/End: Complemental strand, 29623436 - 29623352
Alignment:
Q  551 gaaaaatgatgaaatttttcataatttt-tgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||||| ||||||||||| | |||| | |||||||| ||||||||||||||| ||| |||| ||||||||| |||||||||||    
T  29623436 gaaaaatga-gaaatttttcacatttttctcaaagagtaattttttagaaaatgataaactaatgcttatgattcatatattttta 29623352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 1132818 - 1132914
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| || |||| ||||| | |||||||||||||| ||||||||| ||||| ||| ||||  | ||| ||||||||||||| ||||||||||||||    
T  1132818 aaaattataaaatctttcacattttttgaaagagtaattttttagagaatgataaattaatgttcatggttaatatatttttaattttaagaatatt 1132914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 560 - 647
Target Start/End: Original strand, 32720972 - 32721060
Alignment:
Q  560 tgaaatttttcataatttttgaaagagtattttt-tagaaaatgacaaagtaatacttatgattaatatatttttattttaagaatatt 647  Q
    |||||| ||||| | || |||||||||||||||| |||| | ||| ||| |||| ||||||||||||||||||||| ||| | ||||||    
T  32720972 tgaaatctttcacatttattgaaagagtatttttgtagagagtgataaattaatgcttatgattaatatatttttaattttaaaatatt 32721060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 38515399 - 38515339
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||| | ||| |||||||||||||||||||| |||| ||||||||||||||    
T  38515399 attttttagagaataataaactaatacttatgattaatatacttttaattttaagaatatt 38515339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 562 - 647
Target Start/End: Complemental strand, 50201757 - 50201667
Alignment:
Q  562 aaatttttcataatttttgaaagagtatt-ttttagaaaatgacaaagtaatacttatgat---taatatattttta-ttttaagaatatt 647  Q
    |||| ||||| |||||||||||||||||| ||||||| ||||  ||| |||| ||||||||   ||||||||||||| |||||||||||||    
T  50201757 aaatctttcacaatttttgaaagagtatttttttagagaatggtaaattaatgcttatgattaataatatatttttagttttaagaatatt 50201667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 7661197 - 7661138
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||| ||| |||| ||||||||||||||    
T  7661197 ttttttagagaatgataaactaatacttatgattaacatacttttaattttaagaatatt 7661138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 17642750 - 17642691
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  17642750 ttttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatatt 17642691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 43237451 - 43237392
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||| | |||| ||||||||||||||    
T  43237451 ttttttagagaatgataaactaatacttatgattaataaacttttaattttaagaatatt 43237392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 47714593 - 47714652
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||  |||||||||||||||||||| |||| ||||||||||||||    
T  47714593 ttttttagagaatgataagctaatacttatgattaatatacttttaattttaagaatatt 47714652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 34306758 - 34306700
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaatatt 647  Q
    ||||||| | ||||| ||| ||||| |||||||||||||| ||| ||||||||||||||    
T  34306758 ttttttatagaatgataaactaatatttatgattaatatactttaattttaagaatatt 34306700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 589 - 644
Target Start/End: Original strand, 49682921 - 49682978
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttta--ttttaagaat 644  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||||  ||||||||||    
T  49682921 ttttttagataatgataaactaatacttatgattaatatacttttaatttttaagaat 49682978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 645
Target Start/End: Complemental strand, 3991001 - 3990929
Alignment:
Q  575 tttttgaaagagtatttttt--agaaaatgacaaagtaatacttatgattaatatatttttattttaagaata 645  Q
    ||||| ||||||||||||||  |||   ||| ||| |||| ||||||||||||||||||| ||||||||||||    
T  3991001 tttttaaaagagtattttttttagagggtgataaattaattcttatgattaatatattttaattttaagaata 3990929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 42583195 - 42583278
Alignment:
Q  568 ttcataatttttgaaaga---gtattttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| |||||||||||   || ||||||||| ||||| ||| || ||||||||||||||||| |||| | ||||||||||||    
T  42583195 ttcatattttttgaaagaacagttttttttagagaatgataaactagtacttatgattaatatacttttaactttaagaatatt 42583278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 48951934 - 48951983
Alignment:
Q  561 gaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagt 609  Q
    ||||||||| | |||||||||||||||| ||||||||||||||| |||||    
T  48951934 gaaattttttacaatttttgaaagagtatttttttagaaaatgataaagt 48951983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 589 - 634
Target Start/End: Complemental strand, 55445068 - 55445023
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||||    
T  55445068 ttttttagagaatgataaactaatacttatgattaatatactttta 55445023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 634
Target Start/End: Complemental strand, 30697547 - 30697487
Alignment:
Q  575 tttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||||||| |||||||| ||| ||||| ||| ||||  ||||||||||||||||||||    
T  30697547 tttttgaaagattatttttttagagaatgataaactaatgtttatgattaatatattttta 30697487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 35283277 - 35283189
Alignment:
Q  561 gaaatttttcataatttttgaaagagtattttttagaaaa-tgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | ||||||||||||||||||||   | | ||| ||| |||| ||||||| |||||||||||| ||||||||||||||    
T  35283277 gaaatctttcacattttttgaaagagtatttttttttagagtgataaattaattcttatgactaatatatttttaattttaagaatatt 35283189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 647
Target Start/End: Complemental strand, 36796582 - 36796526
Alignment:
Q  592 tttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  36796582 tttagagaatgataaactaatatttatgattaatatacttttaattttaagaatatt 36796526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 46017367 - 46017307
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| ||| |||||||||||||||| |||| ||||||| ||||||    
T  46017367 attttttagagaatgataaaataaaacttatgattaatatacttttaattttaaaaatatt 46017307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 551 - 647
Target Start/End: Original strand, 54089335 - 54089434
Alignment:
Q  551 gaaaaatgatgaaatttttcataatttttgaaagagta--ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| | |||| ||||| | ||||||||||||||  ||||| | ||||||| ||| ||||  | ||||||||||||||||| ||||||| ||||||    
T  54089335 gaaaaatggtaaaatgtttcaaattttttgaaagagtaattttttaaaaaaatgataaattaatgttaatgattaatatatttttaattttaaaaatatt 54089434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 2e-17; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 9684696 - 9684770
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||| ||||||||||||||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  9684696 tttttgaaagagtaattttttagaaaatgataaattaatgcttatgattaatatatttttaattttaagaatatt 9684770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 19389711 - 19389807
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| | |||| ||||| ||||||||||||| || ||||||||| ||||| ||| |||| |||||||||||||||||||| ||||||| ||||||    
T  19389711 aaaatggtaaaatctttcacaatttttgaaagattaattttttagagaatgataaattaatgcttatgattaatatatttttaattttaaaaatatt 19389807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 9096500 - 9096413
Alignment:
Q  561 gaaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||| ||| | ||||||||| ||||||||||||| ||||| ||| ||||  || |||||||||||||||| ||||||||||||||    
T  9096500 gaaatttgtcacattttttgaaaaagtattttttagagaatgataaattaatgtttttgattaatatatttttaattttaagaatatt 9096413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 33718342 - 33718283
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  33718342 ttttttagagaatgataaactaatacttatgattaatatatttttaattttaagaatatt 33718283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 35704951 - 35705025
Alignment:
Q  575 tttttgaaagagtatt-ttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| ||||||| ||||||||||| | ||| |||| |||||||||||||||||||| ||||||||||||||    
T  35704951 tttttgaatgagtattcttttagaaaatcataaattaatgcttatgattaatatatttttaattttaagaatatt 35705025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 35869006 - 35868932
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||| || ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  35869006 tttttgaaagaatagttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 35868932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 575 - 646
Target Start/End: Complemental strand, 6373315 - 6373240
Alignment:
Q  575 tttttgaaagagtat--tttttagaaaatgacaaagtaatacttatgattaatatattttt--attttaagaatat 646  Q
    |||||||||||||||  |||||||||| ||| ||| |||||||||||||||||| ||||||  |||||||||||||    
T  6373315 tttttgaaagagtatgttttttagaaagtgataaattaatacttatgattaatacattttttaattttaagaatat 6373240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 32760917 - 32760858
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  32760917 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 32760858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 38302278 - 38302337
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  38302278 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 38302337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 588 - 645
Target Start/End: Original strand, 4648906 - 4648964
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaata 645  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||    
T  4648906 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaata 4648964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 647
Target Start/End: Original strand, 4841591 - 4841688
Alignment:
Q  552 aaaaatgatgaaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| | ||||| ||||| | ||||| |||||||||||||| | | | ||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  4841591 aaaaattaagaaatctttcacatttttttaaagagtatttttttatagagtgataaattaatgcttatgattaatatatttttaattttaagaatatt 4841688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 551 - 639
Target Start/End: Complemental strand, 28523818 - 28523729
Alignment:
Q  551 gaaaaatgatgaaatttttcataatttttgaaagagt-attttttagaaaatgacaaagtaatacttatgattaatatatttttatttta 639  Q
    |||||||||  |||| ||||||| ||||||||||| | |||||||| | ||||| ||| ||||  |||||||||||||||||||| ||||    
T  28523818 gaaaaatgaaaaaatctttcatattttttgaaagaatgattttttaaagaatgataaattaatgtttatgattaatatatttttaattta 28523729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 13293903 - 13293963
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| ||| ||||| ||| |||||||||||||||||||| |||||||||||| ||||||    
T  13293903 atttttaagagaatgataaattaatacttatgattaatatattttttattttaaaaatatt 13293963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 27480091 - 27480151
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||| ||||||||||||| |||| ||||||||||||||    
T  27480091 attttttagagaatgataaactaatacatatgattaatatacttttaattttaagaatatt 27480151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 39012006 - 39011934
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaatatt 647  Q
    |||||||||||  |||||||||| | ||| ||| |||| ||||||||||||||||||||| ||| | ||||||    
T  39012006 tttttgaaagatgattttttagagagtgataaattaatgcttatgattaatatatttttaattttaaaatatt 39011934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 2021141 - 2021082
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  2021141 ttttttagagaatgataaattaatatttatgattaatatacttttaattttaagaatatt 2021082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 593 - 647
Target Start/End: Complemental strand, 6491341 - 6491286
Alignment:
Q  593 ttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  6491341 ttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatatt 6491286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 647
Target Start/End: Original strand, 17668026 - 17668113
Alignment:
Q  562 aaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatatttt-tattttaagaatatt 647  Q
    |||| ||||| | |||||||||||||| ||||||||  ||||| ||| |||| |||||| ||||||||||||  ||||||||||||||    
T  17668026 aaatctttcacattttttgaaagagtaattttttagggaatgataaattaatgcttatgcttaatatattttcaattttaagaatatt 17668113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 35701564 - 35701505
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||  ||||||||||||||    
T  35701564 ttttttagagaatgataaactaatacttatgattaatatactttaaattttaagaatatt 35701505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 41695138 - 41695079
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||| ||||||    
T  41695138 ttttttagagaatgataaattaatacttatgattaatatacttttgattttaaaaatatt 41695079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 647
Target Start/End: Original strand, 3081229 - 3081311
Alignment:
Q  567 tttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| || |||||||| |||||||||| ||| | ||| ||| | || |||||||||||||||||||| ||||||||||||||    
T  3081229 tttcacaaattttgaaatagtattttttgagagagtgataaattgatgcttatgattaatatatttttaattttaagaatatt 3081311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 580 - 633
Target Start/End: Original strand, 7663865 - 7663919
Alignment:
Q  580 gaaagagtattt-tttagaaaatgacaaagtaatacttatgattaatatattttt 633  Q
    |||||||||||| |||||||||||| ||| ||||  |||||||||||||||||||    
T  7663865 gaaagagtatttatttagaaaatgataaactaatgtttatgattaatatattttt 7663919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 17093057 - 17092999
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||| ||||| ||| | |||||||||||||||||| |||| ||||||||||||||    
T  17093057 tttttagagaatgataaacttatacttatgattaatatacttttaattttaagaatatt 17092999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 28154850 - 28154792
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatatat-ttttattttaagaatatt 647  Q
    |||||||| ||||| ||| ||||  ||||||||||||||| ||||||||||||||||||    
T  28154850 tttttagagaatgataaattaatgtttatgattaatatattttttattttaagaatatt 28154792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 594
Target Start/End: Original strand, 12063873 - 12063906
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt 594  Q
    ||||||||||||| ||||||||||||||||||||    
T  12063873 gaaatttttcatattttttgaaagagtatttttt 12063906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 31633023 - 31632950
Alignment:
Q  562 aaatttttcataatttttgaaagagtattttt-tagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    |||| ||||| | ||||||||||||||||||| |||| ||||| |||  ||| ||| |||||||||||||||||    
T  31633023 aaatctttcacattttttgaaagagtatttttgtagagaatgataaatgaatgcttctgattaatatattttta 31632950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 632
Target Start/End: Complemental strand, 33682534 - 33682490
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatatatttt 632  Q
    |||||||||||||||| ||| |||| ||||| |||||||||||||    
T  33682534 attttttagaaaatgaaaaattaatgcttataattaatatatttt 33682490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 35042402 - 35042306
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaaga-gtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| | |||| ||||||| |||||||||||   |||||||||| ||||| ||| ||||  ||||||| | ||||||||| ||||||||||||||    
T  35042402 aaaatggtaaaatctttcatattttttgaaagataaattttttagagaatgataaattaatgtttatgatcactatatttttaattttaagaatatt 35042306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 5883495 - 5883582
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttt-ttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaatatt 647  Q
    ||||||||||||| ||||||||||||| |||| ||||| | ||| ||| |||||||||||||||||||||||||| ||| | ||||||    
T  5883495 gaaatttttcatattttttgaaagagtcttttgttagagagtgataaattaatacttatgattaatatatttttaattttaaaatatt 5883582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 575 - 646
Target Start/End: Original strand, 30543268 - 30543341
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatat 646  Q
    ||||||||||| || ||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  30543268 tttttgaaagaataattttttagagaatgataaattaatacttatgattaatatatttttaattttaagaatat 30543341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 2925854 - 2925914
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  2925854 attttttagaaaatgataaaataatacttatgattaatatacttttaattttaagaatatt 2925914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 573 - 647
Target Start/End: Complemental strand, 33579431 - 33579355
Alignment:
Q  573 aatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||||| ||||||||| ||||| ||| |||| ||||||| |||||||||||| ||||||||||||||    
T  33579431 aatttttgaaagagtaattttttagagaatgataaattaatgcttatgactaatatatttttaattttaagaatatt 33579355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 13061317 - 13061376
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  13061317 ttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatatt 13061376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 32299263 - 32299204
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  32299263 ttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatatt 32299204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 32300216 - 32300157
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  32300216 ttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatatt 32300157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 41432667 - 41432741
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| ||||||| ||||||||| ||| | ||| ||||||||||||||||||||||||| ||||||||||||||    
T  41432667 tttttgcaagagtaattttttagagaataataaattaatacttatgattaatatatttttaattttaagaatatt 41432741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 13255506 - 13255446
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  13255506 attttttagagaatgataaactaatacttatgattaatatacttttgattttaagaatatt 13255446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 26345823 - 26345727
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattt-ttattttaagaatatt 647  Q
    |||||||| ||| |||||| | |||| ||| ||||| ||||||||| ||||| ||| |||| |||||||||||||||||| ||||||||| ||||||    
T  26345823 aaaatgataaaaattttcacatttttcgaatgagtaattttttagagaatgataaattaatgcttatgattaatatatttattattttaaaaatatt 26345727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 9312858 - 9312952
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||| |||| |||| || |||||||||| | ||||||||| |||||| ||| |||| |||| |||||||||| |||||||||||| ||||||    
T  9312858 aaaatgataaaatctttcttattttttgaaagtg-attttttaggaaatgataaattaatgcttaagattaatatattttttattttaacaatatt 9312952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 11017762 - 11017703
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  11017762 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 11017703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 23871383 - 23871442
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  23871383 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 23871442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 33991702 - 33991643
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  33991702 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 33991643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 581 - 647
Target Start/End: Complemental strand, 36269912 - 36269845
Alignment:
Q  581 aaagagtattttttagaaaatgacaaagtaatacttatgattaatat-atttttattttaagaatatt 647  Q
    ||||||||||||||||| ||||| ||| |||| ||||||||| ||||  |||||||||||||||||||    
T  36269912 aaagagtattttttagagaatgataaattaatgcttatgattgatatgttttttattttaagaatatt 36269845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 42488547 - 42488606
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  42488547 ttttttagagaatgataaactaatacttatgattaatatacttttgattttaagaatatt 42488606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 52073363 - 52073437
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||| ||||||||| ||||| ||| |||   ||||||||||||||||||| ||||||||||||||    
T  52073363 tttttgaaagagtaattttttagagaatgataaattaacgtttatgattaatatatttttaattttaagaatatt 52073437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 15463972 - 15463912
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttta--ttttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||||  |||||||||||||    
T  15463972 ttttttagagaatgataaactaatacttatgattaatatacttttaatttttaagaatatt 15463912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 633
Target Start/End: Original strand, 38958068 - 38958153
Alignment:
Q  549 aagaaaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt 633  Q
    ||||||||||| ||| | ||||| | |||||||||||||| ||||||  ||||||| ||| || | ||||||||||||||||||||    
T  38958068 aagaaaaatgaagaagtctttcacattttttgaaagagtattttttttaaaaatgataaattactgcttatgattaatatattttt 38958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 50162336 - 50162237
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatact---tatgattaatatattttt-attttaagaatatt 647  Q
    ||||| || |||| ||||||| |||||||||||| | ||||||||| ||||| ||| ||||| |   |||||||||||||||||| ||||||||||||||    
T  50162336 aaaataataaaatctttcatattttttgaaagagaaattttttagagaatgaaaaattaataatatttatgattaatatatttttaattttaagaatatt 50162237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 645
Target Start/End: Complemental strand, 1278645 - 1278573
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaata 645  Q
    ||||| |||||||| |||||| || ||||| ||| |||| |||||||||||||||||||| ||||||||||||    
T  1278645 tttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaattttaagaata 1278573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 17675358 - 17675298
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  17675358 attttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatatt 17675298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 596 - 647
Target Start/End: Original strand, 36668576 - 36668628
Alignment:
Q  596 gaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  36668576 gaaaatgataaactaatgcttatgattaatatatttttaattttaagaatatt 36668628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 50097804 - 50097716
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatt-ttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | |||||||||||||||| ||||||| | ||| ||| || |  ||||||||||||||||||| ||||||||||||||    
T  50097804 gaaatctttcacattttttgaaagagtatttttttagagagtgataaattattgtttatgattaatatatttttaattttaagaatatt 50097716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 51303066 - 51303154
Alignment:
Q  561 gaaatttttcataatttttgaaagagtat-tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||| ||||| | ||||| ||||||| | |||||||| ||||| ||| |||| ||||||||||||||| ||||||| |||||||||||    
T  51303066 gaaatctttcacattttttcaaagagtgtatttttagagaatgataaattaatgcttatgattaatatattttttatgttaagaatatt 51303154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 2175495 - 2175436
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  2175495 ttttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatatt 2175436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 647
Target Start/End: Original strand, 9314959 - 9315034
Alignment:
Q  574 atttttgaaagagt-attttttagaaaatgacaaagtaatacttatgattaatatatttt-tattttaagaatatt 647  Q
    |||||||||||||| |||||||||  ||||| ||| | | ||||||||||||||||||||  ||||||||||||||    
T  9314959 atttttgaaagagtgattttttagggaatgataaattcacacttatgattaatatattttaaattttaagaatatt 9315034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 27500145 - 27500086
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||  ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  27500145 ttttttagtgaatgataaactaatacttatgattaatatacttttaattttaagaatatt 27500086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 647
Target Start/End: Original strand, 34551980 - 34552067
Alignment:
Q  562 aaatttttcataatttttgaaagagtattttt-tagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||| ||||||| |||||||||  |||||||| |||| | ||| |||  ||| ||||||||||||||| |||||||||||||||||||    
T  34551980 aaatctttcatattttttgaaaaggtatttttctagagagtgataaatcaatgcttatgattaatatattttttattttaagaatatt 34552067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 35604174 - 35604248
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt--attttaagaatatt 647  Q
    ||||||| ||||||||||||||| ||| | ||| |||   |||||||||||||||||||  ||||||||||||||    
T  35604174 tttttgatagagtattttttagagaataataaattaacgtttatgattaatatattttttaattttaagaatatt 35604248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 39889578 - 39889637
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| |||||| |||||||    
T  39889578 ttttttagagaatgataaactaatacttatgattaatatacttttaattttatgaatatt 39889637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 647
Target Start/End: Original strand, 43036235 - 43036302
Alignment:
Q  582 aagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||||| ||| | ||| ||| ||| ||||||||||||||||||||| ||||||||||||||    
T  43036235 aagagtattttttcagagagtgataaattaagacttatgattaatatatttttaattttaagaatatt 43036302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 47905609 - 47905668
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||||| |||||||||||| |||| ||||||||||||||    
T  47905609 ttttttagagaatgataaactaatactaatgattaatatacttttaattttaagaatatt 47905668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 50247757 - 50247698
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||| ||||||    
T  50247757 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatatt 50247698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 50402902 - 50402843
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| || ||||| ||| ||||||||||||||||||||||||| ||||||| ||||||    
T  50402902 tttttttgagaatgataaactaatacttatgattaatatatttttaattttaaaaatatt 50402843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 1523755 - 1523697
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| | ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  1523755 tttttaaagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 1523697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 561 - 645
Target Start/End: Original strand, 25561209 - 25561295
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaata 645  Q
    ||||| ||||| | |||||||||||||||||||| ||  | ||| ||  |||| |||||||||||||||||||| ||||||||||||    
T  25561209 gaaatctttcacattttttgaaagagtatttttttagcgagtgataagttaatgcttatgattaatatatttttaattttaagaata 25561295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 647
Target Start/End: Original strand, 26757076 - 26757134
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| | ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  26757076 tttttaaagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 26757134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 551 - 627
Target Start/End: Original strand, 718455 - 718532
Alignment:
Q  551 gaaaaatgatgaaatttttcataatttttgaaagagt-attttttagaaaatgacaaagtaatacttatgattaatat 627  Q
    |||||||||| |||| ||||| | |||| |||||||| |||||||| | ||||| ||| |||| ||||||||||||||    
T  718455 gaaaaatgataaaatctttcacatttttcgaaagagtgattttttaaagaatgataaattaatgcttatgattaatat 718532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 647
Target Start/End: Complemental strand, 1063489 - 1063437
Alignment:
Q  597 aaaatgacaaagtaatacttatgattaatatattttt--attttaagaatatt 647  Q
    ||||||| ||| ||||||||||| |||||||||||||  ||||||||||||||    
T  1063489 aaaatgataaactaatacttatgcttaatatattttttaattttaagaatatt 1063437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 647
Target Start/End: Original strand, 1688139 - 1688196
Alignment:
Q  591 ttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||| ||||| ||| |||||||||||||||||||| |||| ||||||| ||||||    
T  1688139 ttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatatt 1688196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 591 - 647
Target Start/End: Complemental strand, 14153270 - 14153213
Alignment:
Q  591 ttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  14153270 ttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatatt 14153213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 589 - 626
Target Start/End: Complemental strand, 26940740 - 26940703
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaata 626  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  26940740 ttttttagaaaatgataaactaatacttatgattaata 26940703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 643
Target Start/End: Complemental strand, 34738491 - 34738422
Alignment:
Q  575 tttttgaaagagtatttt-ttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaa 643  Q
    |||| |||| |||||||| ||||| ||| | ||| ||||| |||||||||||||||||||| ||||||||    
T  34738491 ttttagaaaaagtattttgttagagaattataaattaatagttatgattaatatatttttaatttaagaa 34738422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 634
Target Start/End: Original strand, 9173670 - 9173714
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    |||||||| ||||| ||| |||| |||||||||||||||||||||    
T  9173670 tttttagataatgataaactaatgcttatgattaatatattttta 9173714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 632
Target Start/End: Complemental strand, 28748380 - 28748308
Alignment:
Q  561 gaaatttttcataatttttgaaagagtattttttagaa-aatgacaaagtaatacttatgattaatatatttt 632  Q
    ||||| |||| || ||| ||||||| || ||||| ||| ||||| ||| ||||||||||||||||||||||||    
T  28748380 gaaatctttcgtattttatgaaagaataattttttgaagaatgataaactaatacttatgattaatatatttt 28748308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 43530189 - 43530277
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | ||||| ||||||| |||||| ||| | ||| ||| |||| |||||||||||||||||||| ||||||||| ||||    
T  43530189 gaaatctttcacattttttaaaagagtgtttttttagagagtgataaattaatgcttatgattaatatatttttaattttaagagtatt 43530277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 50084317 - 50084229
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttt-ttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||| | ||||||||||||| |||| ||| | | ||| ||| ||||  ||||||||| |||| |||||||||||||||||||    
T  50084317 gaaatttttcacattttttgaaagagtgttttcttaaagagtgataaattaatgtttatgattattatattttttattttaagaatatt 50084229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 50476718 - 50476630
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttta-gaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | |||||||||||| | |||||| || ||||| ||| |||| ||||| ||| |||||||||| ||||||||||||||    
T  50476718 gaaatctttcacattttttgaaagagcaatttttaagataatgataaactaatgcttattattgatatatttttaattttaagaatatt 50476630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 23620714 - 23620772
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||||||| ||||||||||||||    
T  23620714 ttttttagagaatgataaactaatacttatgattaatatattttaattttaagaatatt 23620772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 41002171 - 41002230
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  41002171 ttttttagataatgataaactaatacttatgattaatatatttttaattttaagaatatt 41002230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 588 - 646
Target Start/End: Complemental strand, 42220202 - 42220143
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatat 646  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  42220202 attttttagataatgataaactaatacttatgattaatatatttttaattttaagaatat 42220143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 43189018 - 43188959
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  43189018 ttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatatt 43188959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 4787893 - 4787982
Alignment:
Q  561 gaaatttttcataatttttgaaagagta--ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||| | ||||||||||||||  ||||||||| | ||| ||| |||| |||||||||||||||||||| ||||||| ||||||    
T  4787893 gaaatttttcacattttttgaaagagtaatttttttagagagtgataaattaatgcttatgattaatatatttttaattttaaaaatatt 4787982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 33810110 - 33810191
Alignment:
Q  568 ttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| ||||||||||| || ||||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  33810110 ttcatattttttgaaagaataattttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatatt 33810191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 22556595 - 22556683
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | ||||| |||||||||||||| ||| | ||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  22556595 gaaatctttcacattttttaaaagagtatttttttagagagtgataaactaatgcttatgattaatatatttttaattttaagaatatt 22556683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 5967973 - 5968032
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  5967973 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 5968032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 42620272 - 42620331
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  42620272 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 42620331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 43665089 - 43665148
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| ||||| ||| || |||||||||||||||||||||| ||||||||||||||    
T  43665089 ttttttagagaatgataaactactacttatgattaatatatttttaattttaagaatatt 43665148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 47275922 - 47275981
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  47275922 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 47275981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 24923299 - 24923373
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||  ||||||||| ||||| ||| ||||  ||||||||||||||||||| ||||||||||||||    
T  24923299 tttttgaaagagtggttttttagagaatgataaattaatgattatgattaatatatttttaattttaagaatatt 24923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 575 - 646
Target Start/End: Original strand, 7667070 - 7667143
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatat 646  Q
    ||||||||||| || ||||||||| ||||| ||| ||||||||||||||||||||  ||| |||||||||||||    
T  7667070 tttttgaaagaataattttttagagaatgataaactaatacttatgattaatatacatttaattttaagaatat 7667143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 576 - 647
Target Start/End: Original strand, 33187753 - 33187826
Alignment:
Q  576 ttttgaaagagtatttt-ttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||||||||| |||||   ||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  33187753 ttttgaaagagtattttcttagagggtgataaattaatgcttatgattaatatatttttaattttaagaatatt 33187826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 36747457 - 36747397
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata--tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||||||||||||||||||  |||| ||||||||||||||    
T  36747457 ttttttagagaatgaaaaactaatacttatgattaatatactttttaattttaagaatatt 36747397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 634
Target Start/End: Complemental strand, 43230164 - 43230091
Alignment:
Q  562 aaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    |||| ||||||| ||||||||| |||||||||| || |||||| ||| ||||| | ||||||||||||||||||    
T  43230164 aaatctttcatattttttgaaatagtatttttttagtaaatgataaattaatattaatgattaatatattttta 43230091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 647
Target Start/End: Complemental strand, 14676428 - 14676332
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatatttt-tattttaagaatatt 647  Q
    |||||| | |||| ||||| | |||||||||||||| ||||||||  ||||| ||| |||| |||||| ||||||||||||  ||||||||||||||    
T  14676428 aaaatggtcaaatctttcacattttttgaaagagtaattttttagggaatgataaattaatgcttatggttaatatattttcaattttaagaatatt 14676332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 23465883 - 23465979
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatat-ttttattttaagaatatt 647  Q
    |||||| | |||| ||||| | ||||| ||||| || ||||||||| ||||| ||| |||| |||||||||||||||| ||| ||||||||||||||    
T  23465883 aaaatggtaaaatctttcacattttttaaaagaatagttttttagagaatgataaattaattcttatgattaatatatatttaattttaagaatatt 23465979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 28437461 - 28437521
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  28437461 attttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatatt 28437521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 33113558 - 33113618
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| ||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  33113558 atttttcagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 33113618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 33406551 - 33406611
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| ||| |||||||||||||||| |||| ||||||||||||||    
T  33406551 attttttagagaatgataaactaacacttatgattaatatacttttaattttaagaatatt 33406611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 643
Target Start/End: Original strand, 34651972 - 34652028
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaa 643  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||    
T  34651972 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaa 34652028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 647
Target Start/End: Original strand, 36845333 - 36845420
Alignment:
Q  562 aaatttttcataatttttgaaagagtat-tttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||| ||||| | |||||||||||| |  |||||||| ||||  ||| ||||||||||||||| ||||||||| ||||||||||||||    
T  36845333 aaatatttcacattttttgaaagagaaactttttagagaatgttaaattaatacttatgattactatatttttaattttaagaatatt 36845420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 38235954 - 38235896
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||| ||||| ||| |||||||||||||||||||| |||| ||||||| ||||||    
T  38235954 tttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatatt 38235896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 647
Target Start/End: Complemental strand, 3363797 - 3363709
Alignment:
Q  561 gaaatttttcataatttttgaaagagtattt-tttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| ||||||| ||||||||||| |||| | | ||| ||| ||||| |||| ||| |||||||||| ||||||||||||||    
T  3363797 gaaatatttcacaatttttaaaagagtatttatttaaagagtgataaattaatatttataattgatatatttttaattttaagaatatt 3363709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 573 - 647
Target Start/End: Original strand, 32650294 - 32650370
Alignment:
Q  573 aatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||||| ||||||||| ||||| ||| |||| | |||||||| | ||||||| ||||||| ||||||    
T  32650294 aatttttgaaagagtagttttttagagaatgataaattaatgcatatgattattttatttttaattttaaaaatatt 32650370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 634
Target Start/End: Complemental strand, 38138107 - 38138047
Alignment:
Q  575 tttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||| |||||||||||| ||| ||||| ||| |||| ||||||||||||| |||||||    
T  38138107 tttttgatagagtatttttttagagaatgataaattaatgcttatgattaatacattttta 38138047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 577 - 647
Target Start/End: Original strand, 42112866 - 42112938
Alignment:
Q  577 tttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||| |||||| ||| ||||| ||| |||| ||||||||| |||||||||| || |||||||||||    
T  42112866 tttgaaagagtgtttttttagagaatgataaactaatgcttatgattcatatatttttaatattaagaatatt 42112938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 551 - 647
Target Start/End: Complemental strand, 36030993 - 36030895
Alignment:
Q  551 gaaaaatgatgaaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||  ||||| ||||| | |||| ||||||||||||||| ||| ||||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  36030993 gaaaaatggagaaatctttcacatttttggaaagagtatttttttagagaatgataaattaatgcttatgattaatatatttttaattttaagaatatt 36030895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 8990861 - 8990942
Alignment:
Q  568 ttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| |||||||||||  | ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  8990861 ttcatattttttgaaagaacagttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatatt 8990942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 3038866 - 3038926
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  3038866 attttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatatt 3038926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 16625696 - 16625783
Alignment:
Q  561 gaaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | ||||||||||||||||||||||| ||||| |||  ||| ||||||||| |||||||||| || |||||||||||    
T  16625696 gaaatctttcacattttttgaaagagtattttttagagaatgataaaccaatgcttatgattcatatatttttaatattaagaatatt 16625783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 562 - 647
Target Start/End: Complemental strand, 30523466 - 30523379
Alignment:
Q  562 aaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||| ||||| | |||||||||||||| ||||||| | ||||| ||| ||||||||||||||||||||||||| |||| |||||||||    
T  30523466 aaatctttcacattttttgaaagagtagttttttaaagaatgataaattaatacttatgattaatatatttttaatttcaagaatatt 30523379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 567 - 647
Target Start/End: Complemental strand, 4666319 - 4666237
Alignment:
Q  567 tttcataatttttgaaagagtatttt-ttagaaaatgacaaagtaatacttatgattaatatatttt-tattttaagaatatt 647  Q
    ||||||| |||||||||||||||||| ||||| | ||| ||| |||| |||||||||||||||||||  ||||||||||||||    
T  4666319 tttcatattttttgaaagagtattttattagagagtgataaattaatgcttatgattaatatattttaaattttaagaatatt 4666237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 577 - 643
Target Start/End: Original strand, 26599162 - 26599230
Alignment:
Q  577 tttgaaagagtattttt-tagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaa 643  Q
    ||||||| ||||||||| |||| ||||| ||| |||||||||||||||||||| |||||||||||||||    
T  26599162 tttgaaaaagtatttttctagagaatgataaaataatacttatgattaatatattttttattttaagaa 26599230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 32243637 - 32243577
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  32243637 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 32243577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 36567197 - 36567257
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  36567197 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 36567257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 44020501 - 44020441
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  44020501 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 44020441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 4042125 - 4042066
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  4042125 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 4042066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 8410850 - 8410909
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  8410850 ttttttagagaatgataaattaatacttatgattaatatacttttaattttaagaatatt 8410909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 12963891 - 12963950
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||| |||||| || |||||||||||||| |||| ||||||||||||||    
T  12963891 ttttttagaaaatgataaagtagtatttatgattaatatacttttaattttaagaatatt 12963950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 13765859 - 13765918
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  13765859 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 13765918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 25955754 - 25955813
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  25955754 ttttttagataatgataaactaatacttatgattaatatacttttaattttaagaatatt 25955813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 38294049 - 38293990
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  38294049 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 38293990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 40357618 - 40357559
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatat-atttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||||||||||||||||| ||||| ||||||||||||||    
T  40357618 ttttttagagaatgataaactaatacttatgattaatataattttaattttaagaatatt 40357559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 552 - 647
Target Start/End: Complemental strand, 41503354 - 41503256
Alignment:
Q  552 aaaaatgatgaaatttttcataatttttgaaagagtatttt--ttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| ||||||||| | | |||||||||||||| |||  ||||| ||||| ||| ||||  ||||||||||||||||||| | ||||||||||||    
T  41503354 aaaaatgaagaaattttttacattttttgaaagagtagtttgtttagagaatgataaattaatgattatgattaatatatttttaagtttaagaatatt 41503256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 5972315 - 5972376
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatatattttt--attttaagaatatt 647  Q
    ||||||| || ||||| ||| |||||||||||||||||||||||||  ||||||||||||||    
T  5972315 atttttttgagaatgataaattaatacttatgattaatatatttttaaattttaagaatatt 5972376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 11950174 - 11950100
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgatt-aatatattttta-ttttaagaatatt 647  Q
    ||||| ||||| ||||||||||| ||||| ||| ||||||||||| || |||||||||||| |||||||||||||    
T  11950174 ttttttaaagaatattttttagataatgataaattaatacttatggttaaatatatttttatttttaagaatatt 11950100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 31550167 - 31550241
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||| || ||||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  31550167 tttttgaaagaatagttttttagagaatgataaactaatagttatgattaatatacttttaattttaagaatatt 31550241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 583 - 647
Target Start/End: Complemental strand, 3022862 - 3022797
Alignment:
Q  583 agagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| |||||||| ||||| ||| ||||  ||||||||||||||||||| ||||||||||||||    
T  3022862 agagtaatttttagagaatgataaattaatgtttatgattaatatatttttaattttaagaatatt 3022797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 591 - 647
Target Start/End: Original strand, 14008251 - 14008308
Alignment:
Q  591 ttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  14008251 ttttagagaatgataaactaatacttatgattaatatacttttgattttaagaatatt 14008308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 588 - 644
Target Start/End: Original strand, 18018517 - 18018574
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaat 644  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| |||||||||||    
T  18018517 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaat 18018574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 634
Target Start/End: Complemental strand, 29880965 - 29880880
Alignment:
Q  550 agaaaaatgatgaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||||| |||||| |||||   |||||||||||| | ||||||||| ||||| |||  ||| |||||||||||||||||||||    
T  29880965 agaaaaatggtgaaatctttcactgtttttgaaagagcaattttttagagaatgataaacgaatgcttatgattaatatattttta 29880880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 634
Target Start/End: Original strand, 30265251 - 30265324
Alignment:
Q  562 aaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    |||| ||| ||| |||||||||||||| ||||||||| ||| | ||| |||| |||||||||||||||||||||    
T  30265251 aaatcttttatattttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatattttta 30265324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 726110 - 726050
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||| ||||||    
T  726110 attttttagagaatgataaactaatacttatgattaatatacttttaattttaaaaatatt 726050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 647
Target Start/End: Original strand, 3119784 - 3119831
Alignment:
Q  601 tgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||| |||||||||||||||||||| |||| ||||||||||||||    
T  3119784 tgacaaactaatacttatgattaatatacttttaattttaagaatatt 3119831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 10165574 - 10165515
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||| ||||||||||||| |||| ||||||||||||||    
T  10165574 ttttttagagaatgataaactaatacgtatgattaatatacttttaattttaagaatatt 10165515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 18826146 - 18826205
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| |||||  || |||||||||||||||||||| |||| ||||||||||||||    
T  18826146 ttttttagagaatgatgaactaatacttatgattaatatacttttaattttaagaatatt 18826205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 647
Target Start/End: Original strand, 36574388 - 36574427
Alignment:
Q  609 taatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  36574388 taatacttatgattaatatatttttaattttaagaatatt 36574427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 38023367 - 38023426
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||| ||||||||||||||| |||| ||||||||||||||    
T  38023367 ttttttagagaatgataaactaattcttatgattaatatacttttaattttaagaatatt 38023426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 647
Target Start/End: Original strand, 8555697 - 8555755
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||| ||||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  8555697 tttttagagaatgataaactaatatttatgattaatatacttttaattttaagaatatt 8555755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 16465049 - 16465138
Alignment:
Q  561 gaaatttttcataatttttgaaagagta--ttttttagaaaatgacaaagtaatacttatgattaatatatttt-tattttaagaatatt 647  Q
    ||||| ||||| | |||||||||||||   |||||||| |||||| ||| ||||  ||||||||| |||||||| |||||||||||||||    
T  16465049 gaaatctttcacattttttgaaagagttgtttttttagtaaatgataaattaatgtttatgattactatattttttattttaagaatatt 16465138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 590 - 647
Target Start/End: Complemental strand, 37217115 - 37217057
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||| ||| |||| | |||||||| ||||||||| ||||||||||||||    
T  37217115 tttttagaaaatgataaattaattcctatgattactatatttttaattttaagaatatt 37217057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 567 - 632
Target Start/End: Original strand, 43100465 - 43100531
Alignment:
Q  567 tttcataatttttgaaagagtatttt-ttagaaaatgacaaagtaatacttatgattaatatatttt 632  Q
    ||||||| |||||||||||||||||| ||||| ||||| ||| |||||| | |||||| ||||||||    
T  43100465 tttcatattttttgaaagagtattttattagagaatgataaattaatacatgtgattactatatttt 43100531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 589 - 634
Target Start/End: Complemental strand, 7184282 - 7184237
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||||    
T  7184282 ttttttagagaatgataaactaatacttatgattaatatactttta 7184237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 7310217 - 7310144
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||| | ||||||||| ||||| |||  |||||||| ||||||||||||||| ||||||| ||||||    
T  7310217 ttttttaaagatttttttttagagaatgataaataaatacttacgattaatatatttttaattttaaaaatatt 7310144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 16518995 - 16519068
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||||| |||||| || ||| | ||| |||| ||||||||| |||||||||| || |||||||||||    
T  16518995 tttttgaaagagtgttttttggagaatcataaactaatgcttatgattcatatatttttaatattaagaatatt 16519068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 568 - 647
Target Start/End: Original strand, 31899254 - 31899335
Alignment:
Q  568 ttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||| |||||||||||||  | ||||||||| | ||| ||| ||||| |||||||||||||| |||| ||||||||||||||    
T  31899254 ttcacaatttttgaaagaacagttttttagagactgataaactaatagttatgattaatatacttttaattttaagaatatt 31899335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 589 - 634
Target Start/End: Complemental strand, 32951037 - 32950992
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||||| ||||| ||| ||||| ||||||||||||||||||||    
T  32951037 ttttttagagaatgataaattaatatttatgattaatatattttta 32950992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 585 - 645
Target Start/End: Original strand, 42946640 - 42946701
Alignment:
Q  585 agtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaata 645  Q
    ||||||||||| ||| ||| ||| ||||  ||||||||||||||||||| ||||||||||||    
T  42946640 agtattttttaaaaagtgataaattaatgtttatgattaatatatttttaattttaagaata 42946701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 575 - 630
Target Start/End: Complemental strand, 1726073 - 1726020
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatatt 630  Q
    |||||||||||  |||||||||| ||||| ||| ||||| ||||||||||||||||    
T  1726073 tttttgaaaga--attttttagagaatgataaactaatatttatgattaatatatt 1726020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 552 - 647
Target Start/End: Complemental strand, 13767615 - 13767520
Alignment:
Q  552 aaaaatgatgaaatttttcataatttttgaaagagtattttt--tagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||| |||||| ||||||  |||||||||||||| ||||  |||| ||||| ||| ||||  ||||||||||||||||||| ||||||| ||||||    
T  13767615 aaaaatggtgaaatctttcat--tttttgaaagagtaattttattagagaatgataaa-taatgtttatgattaatatatttttaattttaaaaatatt 13767520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 44656669 - 44656729
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||| | ||| ||| ||||  ||||||||||||||||||| ||||||||||||||    
T  44656669 attttttagatagtgataaattaatttttatgattaatatatttttaattttaagaatatt 44656729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 1740 - 1680
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||| ||||| ||| ||||||||||||||||||||||||| ||||||||||||||    
T  1740 attttttagagaatgataaactaatacttatgattaatatatttttaattttaagaatatt 1680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 569 - 647
Target Start/End: Complemental strand, 38404523 - 38404443
Alignment:
Q  569 tcataatttttgaaagagtat-tttttagaaaatgacaaagtaatacttatgattaatatat-ttttattttaagaatatt 647  Q
    ||||||||||| ||||| ||| |||||||||||||  ||| ||||| ||||||||||||||| ||||||||||||||||||    
T  38404523 tcataattttttaaagaatatatttttagaaaatggtaaattaatatttatgattaatatattttttattttaagaatatt 38404443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 13865012 - 13865071
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  13865012 ttttttagaaaatgataaattaatacttatgattaatatacttttaattttaagaatatt 13865071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 34272676 - 34272617
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  34272676 ttttttagaaaatgataaactaatacttatgattaatatacttttaattttaagaatatt 34272617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 571 - 647
Target Start/End: Complemental strand, 4137888 - 4137808
Alignment:
Q  571 ataatttttgaaagagtatttttt---agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||| |||||||||||||||||||   | ||||||| ||| ||||||||||||||||||||||||| ||||||| ||||||    
T  4137888 ataagttttgaaagagtattttttttaaaaaaatgataaattaatacttatgattaatatatttttaattttaaaaatatt 4137808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 561 - 649
Target Start/End: Complemental strand, 13258676 - 13258586
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatattct 649  Q
    ||||| ||||| | |||||||||||||||||||| ||| ||||| ||| |||| |||| ||||||||||||||| ||||||||| ||||||    
T  13258676 gaaatctttcacattttttgaaagagtatttttttagagaatgataaattaatgcttacgattaatatatttttaattttaagagtattct 13258586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 13537518 - 13537444
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||| ||||||||| ||| | ||| |||| |||||||||||||||||||| ||||||||||||||    
T  13537518 tttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaattttaagaatatt 13537444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 13627066 - 13626992
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||| ||||||||| ||| | ||| |||| |||||||||||||||||||| ||||||||||||||    
T  13627066 tttttgaaagagtaattttttagagaataataaattaatgcttatgattaatatatttttaattttaagaatatt 13626992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 35354002 - 35353930
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaatatt 647  Q
    ||||| |||| |||||||||| | ||||| ||| ||||| |||||||||||||||||||| ||| ||||||||    
T  35354002 ttttttaaagtgtattttttatagaatgataaattaatatttatgattaatatatttttaattttagaatatt 35353930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 575 - 643
Target Start/End: Original strand, 35376544 - 35376612
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaa 643  Q
    |||||| |||||||||||||||| ||  | ||| |||| ||||||||||||||||||| ||||||||||    
T  35376544 tttttggaagagtattttttagagaacaataaattaatgcttatgattaatatattttaattttaagaa 35376612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 3404494 - 3404553
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  3404494 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 3404553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 562 - 647
Target Start/End: Original strand, 15108156 - 15108243
Alignment:
Q  562 aaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||| ||||||| ||||||||||| || ||||||||| ||||| ||| ||| |||||||||||||||| || | ||||||||||||||    
T  15108156 aaatctttcatattttttgaaagaataattttttagagaatgataaattaacacttatgattaatatacttataattttaagaatatt 15108243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 25033541 - 25033482
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  25033541 ttttttagataatgataaactaatacttatgattaatatacttttaattttaagaatatt 25033482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 33230967 - 33231026
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  33230967 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 33231026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 34349876 - 34349817
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  34349876 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 34349817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 36102810 - 36102869
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  36102810 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 36102869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 37659451 - 37659510
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  37659451 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 37659510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 589 - 634
Target Start/End: Original strand, 11961441 - 11961486
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||||    
T  11961441 ttttttagaaaatgataaattaatacttattattaatatattttta 11961486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 589 - 644
Target Start/End: Original strand, 4734416 - 4734472
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaat 644  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| |||||||||||    
T  4734416 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaat 4734472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 592 - 647
Target Start/End: Complemental strand, 29612149 - 29612093
Alignment:
Q  592 tttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| ||||| ||| ||||||||||||||||||||||||| ||||||| ||||||    
T  29612149 tttagacaatgataaattaatacttatgattaatatatttttaattttaataatatt 29612093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 573 - 647
Target Start/End: Original strand, 35856433 - 35856509
Alignment:
Q  573 aatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||||||||| ||||||||| ||||| ||  ||||| ||||||| ||||||||||| ||| ||||||||||    
T  35856433 aatttttgaaagagtatttttttagagaatgataagttaatatttatgatgaatatatttttaattataagaatatt 35856509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 2474687 - 2474746
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| ||||||||||| |||||||| |||| ||||||||||||||    
T  2474687 ttttttagataatgataaactaatacttatggttaatatacttttaattttaagaatatt 2474746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 11876934 - 11876993
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| | ||| ||| ||||||||||||||||||||||||| | ||||||||||||    
T  11876934 ttttttagagagtgataaattaatacttatgattaatatatttttaagtttaagaatatt 11876993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 11891941 - 11892000
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||| | ||| ||| ||||||||||||||||||||||||| | ||||||||||||    
T  11891941 ttttttagagagtgataaattaatacttatgattaatatatttttaagtttaagaatatt 11892000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 36906348 - 36906289
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||| ||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  36906348 tttttcagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 36906289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 609 - 647
Target Start/End: Complemental strand, 41455400 - 41455361
Alignment:
Q  609 taatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  41455400 taatacttatgattaatatatttttaattttaagaatatt 41455361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 3394137 - 3394063
Alignment:
Q  575 tttttgaaagagtatttttta-gaaaatgacaaagtaatacttatgattaatatat-ttttattttaagaatatt 647  Q
    |||||||||||||| |||||| || ||||| ||| ||||  ||||||||||||||| ||||||||||| ||||||    
T  3394137 tttttgaaagagtaatttttaagagaatgataaattaatgtttatgattaatatattttttattttaaaaatatt 3394063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 647
Target Start/End: Complemental strand, 22330878 - 22330792
Alignment:
Q  562 aaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||||| | ||||||||||| |||||||||   | ||| ||| |||| ||||| |||||||||||||| ||||||| ||||||    
T  22330878 aaatttttcaaattttttgaaagattattttttattgattgataaattaatgcttataattaatatatttttaattttaaaaatatt 22330792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 561 - 640
Target Start/End: Complemental strand, 27085539 - 27085458
Alignment:
Q  561 gaaatttttcataatttttgaaagagtatttttt--agaaaatgacaaagtaatacttatgattaatatatttttattttaa 640  Q
    ||||| ||||| | || |||||||||||||||||  ||| | ||| ||| |||| ||||||||||||||||||||| |||||    
T  27085539 gaaatctttcacatttgttgaaagagtattttttttagagagtgataaattaatgcttatgattaatatatttttaatttaa 27085458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 34148485 - 34148558
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||||| || ||||||||| ||||| ||| ||| |||||||||||||||| |||| ||||||||||||||    
T  34148485 tttttgaaagaatagttttttagagaatgataaactaa-acttatgattaatatacttttaattttaagaatatt 34148558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 6839690 - 6839780
Alignment:
Q  561 gaaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatata----tttttattttaagaatatt 647  Q
    ||||| ||||||| |||| ||||||  | |||||||| ||||| ||| |||||||||| ||||||||     |||||||||||||||||||    
T  6839690 gaaatctttcatacttttcgaaagaacaatttttagagaatgataaactaatacttattattaatattatattttttattttaagaatatt 6839780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 634
Target Start/End: Complemental strand, 12596040 - 12595959
Alignment:
Q  554 aaatgatgaaatttttcataatttttgaaagagtat-tttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    ||||||| |||| ||||| | | |||| |||||||  |||||||| ||| ||||| |||||||| |||||||||||||||||    
T  12596040 aaatgataaaatctttcaaattgtttggaagagtaactttttagagaataacaaattaatacttttgattaatatattttta 12595959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 1839711 - 1839799
Alignment:
Q  561 gaaatttttcataatttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatat-ttttattttaagaatatt 647  Q
    ||||| ||||| | |||||||||||||| ||||||||| | ||| ||| |||||| ||| |||||||||| ||| ||||||| ||||||    
T  1839711 gaaatctttcacattttttgaaagagtatttttttagagagtgataaattaatacatatcattaatatatgtttaattttaaaaatatt 1839799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 567 - 638
Target Start/End: Original strand, 8236013 - 8236087
Alignment:
Q  567 tttcataatttttgaaagagtatttttt---agaaaatgacaaagtaatacttatgattaatatatttttatttt 638  Q
    ||||| ||||||||||| ||||||||||   ||| ||||| |||  |||||| ||||||| ||||||||||||||    
T  8236013 tttcacaatttttgaaatagtatttttttatagagaatgataaataaatactcatgattattatatttttatttt 8236087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 562 - 634
Target Start/End: Original strand, 40984968 - 40985039
Alignment:
Q  562 aaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttta 634  Q
    |||| ||||||| ||||||||||   |||||||||| ||||| ||| ||||  ||||||||||||||||||||    
T  40984968 aaatctttcatattttttgaaagta-attttttagagaatgataaattaatgtttatgattaatatattttta 40985039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 553 - 644
Target Start/End: Complemental strand, 26683513 - 26683422
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaat 644  Q
    |||||||| |||| ||||||| |||||||||||||| ||||| || ||||| ||| |||| ||| |||||||||||||||| |||||||||||    
T  26683513 aaaatgat-aaatctttcatattttttgaaagagtaattttttgagaatgataaattaatgcttgtgattaatatatttttaattttaagaat 26683422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 551 - 646
Target Start/End: Complemental strand, 6695496 - 6695398
Alignment:
Q  551 gaaaaatgatgaaatttttcataatttttgaaagagtatt-ttttagaaaatgacaaagtaatacttatgattaatata--tttttattttaagaatat 646  Q
    ||||||||  ||||||||||||| |||||||||||||||| ||||||| ||||| |||  ||| ||||| |||||||||  |||| |||||||||||||    
T  6695496 gaaaaatggagaaatttttcatactttttgaaagagtatttttttagagaatgataaatgaatgcttataattaatataatttttaattttaagaatat 6695398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 8439287 - 8439374
Alignment:
Q  561 gaaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||| ||| ||||||||| ||||||||||||| ||||| ||| ||||  ||||||||||||||||||| ||||||| ||||||    
T  8439287 gaaatcttttatattttttgaaaaagtattttttagagaatgataaattaatgtttatgattaatatatttttaattttaacaatatt 8439374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 647
Target Start/End: Complemental strand, 17444130 - 17444044
Alignment:
Q  562 aaatttttcataatttttgaaagagtatttttt-agaaaatgacaaagtaatacttatgattaatatatttttattttaagaatatt 647  Q
    |||||||||||| ||| | |||||||||||||| || |||    ||| |||||||||||||||||||||||| ||||||||||||||    
T  17444130 aaatttttcatattttctcaaagagtatttttttagcaaacagtaaattaatacttatgattaatatattttaattttaagaatatt 17444044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 23095047 - 23095107
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  23095047 attttttagagaatgataaaataatacttatgattaatatacttttaattttaagaatatt 23095107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 26574314 - 26574374
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  26574314 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 26574374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 5825493 - 5825434
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  5825493 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 5825434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 24735041 - 24734982
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  24735041 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 24734982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 26481051 - 26481110
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  26481051 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 26481110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Complemental strand, 34914788 - 34914729
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  34914788 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 34914729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 590 - 647
Target Start/End: Original strand, 29241754 - 29241812
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  29241754 tttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 29241812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 33212496 - 33212422
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||| || ||||||||| | ||| ||| |||||||||||||| |||||||||| ||||||||||||||    
T  33212496 tttttgaaagattaattttttagatagtgataaactaatacttatgattcatatatttttaattttaagaatatt 33212422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Complemental strand, 33677196 - 33677125
Alignment:
Q  575 tttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||||||||||  ||| | ||| ||| |||| |||||||||||||||||||| ||||||||||||||    
T  33677196 tttttgaaagagtatttt--agagagtgataaattaatgcttatgattaatatatttttaattttaagaatatt 33677125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 574 - 647
Target Start/End: Original strand, 22817245 - 22817320
Alignment:
Q  574 atttttgaaagagtattttt-tagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| ||||||||||||| || | ||||| |||  ||| |||||||||||||||||||| ||||||||||||||    
T  22817245 atttttaaaagagtatttttataaagaatgataaatgaatgcttatgattaatatatttttaattttaagaatatt 22817320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 33939007 - 33939102
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagtattttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||||| |||| ||||| | ||||| |||  ||| |||| ||| ||||| ||| ||||  ||||||||||||||||||| ||||||||||||||    
T  33939007 aaaatgataaaatctttcacatttttttaaaatgtaattttaagagaatgataaattaatgtttatgattaatatatttttaattttaagaatatt 33939102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 575 - 632
Target Start/End: Original strand, 4089302 - 4089360
Alignment:
Q  575 tttttgaaagagtattttt-tagaaaatgacaaagtaatacttatgattaatatatttt 632  Q
    ||||||||||||||||||| |||| | ||| ||| ||||||||| ||||||||||||||    
T  4089302 tttttgaaagagtatttttctagatagtgataaattaatacttacgattaatatatttt 4089360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 592 - 647
Target Start/End: Complemental strand, 1029451 - 1029395
Alignment:
Q  592 tttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||| ||||| ||| |||||||| ||||||||||| |||| ||||||||||||||    
T  1029451 tttagagaatgataaactaatacttgtgattaatatacttttaattttaagaatatt 1029395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 561 - 647
Target Start/End: Original strand, 9104837 - 9104924
Alignment:
Q  561 gaaatttttcataatttttgaaagagtattt-tttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||| ||||||  ||||||||||||||||| |||||| ||||| ||| | || ||||||||| |||| ||||| ||||||||||||||    
T  9104837 gaaatctttcatgttttttgaaagagtatttatttagagaatgataaact-atgcttatgattgatatttttttaattttaagaatatt 9104924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 302 - 242
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  302 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Original strand, 2291 - 2351
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  2291 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 2351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0636 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 588 - 647
Target Start/End: Complemental strand, 8553 - 8493
Alignment:
Q  588 attttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    |||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  8553 attttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 8493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 3590 - 3649
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  3590 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 3649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 589 - 647
Target Start/End: Original strand, 35375 - 35434
Alignment:
Q  589 ttttttagaaaatgacaaagtaatacttatgattaatata-tttttattttaagaatatt 647  Q
    ||||||||| ||||| ||| |||||||||||||||||||| |||| ||||||||||||||    
T  35375 ttttttagagaatgataaactaatacttatgattaatatacttttaattttaagaatatt 35434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 592 - 647
Target Start/End: Original strand, 68623 - 68678
Alignment:
Q  592 tttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaatatt 647  Q
    |||||| ||||| ||| |||||||||||||||||||||||| ||||||| ||||||    
T  68623 tttagataatgataaattaatacttatgattaatatattttaattttaaaaatatt 68678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 575 - 647
Target Start/End: Original strand, 2815 - 2889
Alignment:
Q  575 tttttgaaagagtatttttta-gaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    ||||||||||||| ||||||| || ||||| ||| |||||||||||||| |||||||||| || |||||||||||    
T  2815 tttttgaaagagtgttttttaagagaatgataaactaatacttatgattcatatatttttaatattaagaatatt 2889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 553 - 647
Target Start/End: Original strand, 487 - 583
Alignment:
Q  553 aaaatgatgaaatttttcataatttttgaaagagtat-tttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaatatt 647  Q
    |||||| | |||| ||||| | ||||||||||||||  |||||||| ||||  ||| ||||  ||||||||||||||||||| ||||||||||||||    
T  487 aaaatggtaaaatatttcacattttttgaaagagtaaatttttagagaatgttaaattaatgtttatgattaatatatttttaattttaagaatatt 583  T

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Target: scaffold0245 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 645
Target Start/End: Complemental strand, 4322 - 4250
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaata 645  Q
    ||||| |||||||| |||||| || ||||| ||| |||| |||||||||||||||||||| ||||||||||||    
T  4322 tttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaattttaagaata 4250  T

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Target: scaffold0229 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 575 - 645
Target Start/End: Complemental strand, 4653 - 4581
Alignment:
Q  575 tttttgaaagagta-ttttttagaaaatgacaaagtaatacttatgattaatatattttt-attttaagaata 645  Q
    ||||| |||||||| |||||| || ||||| ||| |||| |||||||||||||||||||| ||||||||||||    
T  4653 tttttaaaagagtaattttttggagaatgataaattaatgcttatgattaatatatttttaattttaagaata 4581  T

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Target: scaffold0078 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 590 - 646
Target Start/End: Complemental strand, 4437 - 4381
Alignment:
Q  590 tttttagaaaatgacaaagtaatacttatgattaatatatttttattttaagaatat 646  Q
    |||||||| ||||| ||| |||| ||||||||||||| || |||| |||||||||||    
T  4437 tttttagagaatgataaattaatgcttatgattaatagatatttaatttaagaatat 4381  T

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