View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11160_high_8 (Length: 464)
Name: NF11160_high_8
Description: NF11160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11160_high_8 |
 |  |
|
| [»] scaffold0408 (1 HSPs) |
 |  |  |
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Alignment Details
Target: chr6 (Bit Score: 378; Significance: 0; HSPs: 10)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 11 - 440
Target Start/End: Original strand, 2368885 - 2369314
Alignment:
| Q |
11 |
cagagaattgcagtttaggtggatatgatgtaagaaaaggaacacggttaattttaaatctttggaagattcacactgatccaaatgtttggtcagatcc |
110 |
Q |
| |
|
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| |||||||| |||| |
|
|
| T |
2368885 |
cagagaattgcaatttagatggatatgatgtaagaaaaggaacacggttaattttgaatcttagaaagattcacactgatccaaatatttggtcaaatcc |
2368984 |
T |
 |
| Q |
111 |
attggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggaggtggtagaagaatt |
210 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2368985 |
attggaattcaaaccagagcggtttcttactacccataaagacgttgatgttagaggtcatcattttgagctattaccatttggaggtggtagaaggatt |
2369084 |
T |
 |
| Q |
211 |
tgcccaggaatgtcatttggccttcaaatggtgcatttaactttggctagttttttgcattcctttgaaatcgtaaatccatcaagtgaacctattgata |
310 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2369085 |
tgccctggaatgtcatttggccttcaaatggtgcatttaactttggctagttttttgcattcctttgaaatcttaaatccatcaagtgaacctattgata |
2369184 |
T |
 |
| Q |
311 |
tgactgaaacttttggattaaccaacaccaaaacaactcctcttgagattcttattaagccacgtttgtcttcgaattgctatgaaattatgtgatctgt |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
2369185 |
tgactgaaacttttggattaaccaacaccaaaacaactcctcttgagattcttattaagccacgtttgtcttcgaattgctatgaaattatgtgatctct |
2369284 |
T |
 |
| Q |
411 |
gtgctagctttataatactttgtaatttgt |
440 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
2369285 |
gtgctagctttataatactttgtaatttgt |
2369314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 11 - 405
Target Start/End: Original strand, 2363139 - 2363533
Alignment:
| Q |
11 |
cagagaattgcagtttaggtggatatgatgtaagaaaaggaacacggttaattttaaatctttggaagattcacactgatccaaatgtttggtcagatcc |
110 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2363139 |
cagagaattgtaatttaggtggatatgatgtaagaaatggaacacgattaattttgaatctttggaagattcacactgatcctaatgtttggtcagatcc |
2363238 |
T |
 |
| Q |
111 |
attggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggaggtggtagaagaatt |
210 |
Q |
| |
|
||| | ||||||||| ||| |||||||||| || ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
2363239 |
attagtattcaaaccggagaggtttcttacaacgcataaagatattgattttagaggtaatcattttgagctattaccatttggaggtggtagaaggatt |
2363338 |
T |
 |
| Q |
211 |
tgcccaggaatgtcatttggccttcaaatggtgcatttaactttggctagttttttgcattcctttgaaatcgtaaatccatcaagtgaacctattgata |
310 |
Q |
| |
|
|| || ||||| ||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
2363339 |
tgtcccggaatatcattagggcttcaaatgctgcatttaactttggctagttttttgcattcctttgaaatcttaaatccatcaagtgaacctattgata |
2363438 |
T |
 |
| Q |
311 |
tgactgaaacttttggattaaccaacaccaaaacaactcctcttgagattcttattaagccacgtttgtcttcgaattgctatgaaattatgtga |
405 |
Q |
| |
|
||| ||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2363439 |
tgaatgaaacttttggattaagcaacaccaaaacaactcctcttgagattcttataaagccacgtttgtcttcgaattgttatgaaattatgtga |
2363533 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 11 - 373
Target Start/End: Original strand, 2351508 - 2351870
Alignment:
| Q |
11 |
cagagaattgcagtttaggtggatatgatgtaagaaaaggaacacggttaattttaaatctttggaagattcacactgatccaaatgtttggtcagatcc |
110 |
Q |
| |
|
|||||||||||| | | ||||| || |||| ||||||||||| |||||||| ||||||||||||||||||| |||||||| | ||||||||||||||| |
|
|
| T |
2351508 |
cagagaattgcactattggtggttaccatgttagaaaaggaactcggttaatgctaaatctttggaagattcaaactgatcctagtgtttggtcagatcc |
2351607 |
T |
 |
| Q |
111 |
attggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggaggtggtagaagaatt |
210 |
Q |
| |
|
||| || ||||||||||| |||||||||| || ||||||| ||||||||||||||||||||||||||| ||| ||||||||||| |||||||||| | |
|
|
| T |
2351608 |
attagagttcaaaccagaaaggtttcttaccactcataaagttgttgatgttagaggtaatcattttgaactactaccatttggaagtggtagaaggaag |
2351707 |
T |
 |
| Q |
211 |
tgcccaggaatgtcatttggccttcaaatggtgcatttaactttggctagttttttgcattcctttgaaatcgtaaatccatcaagtgaacctattgata |
310 |
Q |
| |
|
|| || | ||| || ||||| |||||||| |||||||| ||| | || |||||||||||||||||||| ||| |||||||| || | || | |||||| |
|
|
| T |
2351708 |
tgtcctgcaatatcttttggacttcaaattgtgcatttcactctagcaagttttttgcattcctttgatatcttaaatccaacacccggacttgttgata |
2351807 |
T |
 |
| Q |
311 |
tgactgaaacttttggattaaccaacaccaaaacaactcctcttgagattcttattaagccac |
373 |
Q |
| |
|
|||||||| ||||||||| | ||||||||| | ||||| ||||||||||| ||||| |||| |
|
|
| T |
2351808 |
tgactgaagaatttggattagcaaacaccaaagctactccacttgagattctcattaaaccac |
2351870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 13 - 406
Target Start/End: Original strand, 2307376 - 2307769
Alignment:
| Q |
13 |
gagaattgcagtttaggtggatatgatgtaagaaaaggaacacggttaattttaaatctttggaagattcacactgatccaaatgtttggtcagatccat |
112 |
Q |
| |
|
|||||||| | |||||| || ||| |||| | ||| ||||| || ||||| ||||||||||| |||| |||| ||||| ||| ||||| ||||||||| |
|
|
| T |
2307376 |
gagaattgtactttaggaggttatcatgttataaagggaactcgattaatcacaaatctttggaggattaacacggatcctaatatttggccagatccat |
2307475 |
T |
 |
| Q |
113 |
tggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggaggtggtagaagaatttg |
212 |
Q |
| |
|
| || ||||||||||| | |||||||| || |||||||||||||||||||| |||| | |||||| |||||| ||||||||| |||||||||| || || |
|
|
| T |
2307476 |
tagagttcaaaccagaaagatttcttaccactcataaagatgttgatgttaggggtagtaattttgtgctattgccatttggaagtggtagaaggatatg |
2307575 |
T |
 |
| Q |
213 |
cccaggaatgtcatttggccttcaaatggtgcatttaactttggctagttttttgcattcctttgaaatcgtaaatccatcaagtgaacctattgatatg |
312 |
Q |
| |
|
||| ||||| ||| |||| ||||||||| ||||||| | | | ||||||||||||||||||||||| ||| |||||||| | ||||| | |||||||| |
|
|
| T |
2307576 |
ccctggaatatcacttggacttcaaatgctgcatttcattctagctagttttttgcattcctttgatatcttaaatccaacccctgaacttgttgatatg |
2307675 |
T |
 |
| Q |
313 |
actgaaacttttggattaaccaacaccaaaacaactcctcttgagattcttattaagccacgtttgtcttcgaattgctatgaaattatgtgat |
406 |
Q |
| |
|
| |||| | ||||||||||| ||||| ||| | ||||||||| ||||||| ||||| |||| ||||||| ||||| |||||||| ||||||| |
|
|
| T |
2307676 |
agtgaatcctttggattaacaaacactaaagctactcctcttaagattctcattaaaccacatttgtctatcaattgttatgaaatcatgtgat |
2307769 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 66 - 406
Target Start/End: Original strand, 2340110 - 2340450
Alignment:
| Q |
66 |
aaatctttggaagattcacactgatccaaatgtttggtcagatccattggaattcaaaccagagcggtttcttactacccataaagatgttgatgttaga |
165 |
Q |
| |
|
|||||||||||||||||| || ||||| | ||||||| |||||||||| || ||||||||||| ||||| |||| || ||||||| ||||||||||||| |
|
|
| T |
2340110 |
aaatctttggaagattcaaacagatcctagtgtttggccagatccattagagttcaaaccagaaaggttttttaccactcataaagctgttgatgttaga |
2340209 |
T |
 |
| Q |
166 |
ggtaatcattttgagctattaccatttggaggtggtagaagaatttgcccaggaatgtcatttggccttcaaatggtgcatttaactttggctagttttt |
265 |
Q |
| |
|
|||||||||||||| ||||||||||||||| |||||||||| | || || ||||| || ||||| ||||||||| ||||||| || | |||||||||| |
|
|
| T |
2340210 |
ggtaatcattttgaactattaccatttggaagtggtagaaggaaatgtcctggaatatcgtttggacttcaaatgctgcatttcaccctagctagttttt |
2340309 |
T |
 |
| Q |
266 |
tgcattcctttgaaatcgtaaatccatcaagtgaacctattgatatgactgaaacttttggattaaccaacaccaaaacaactcctcttgagattcttat |
365 |
Q |
| |
|
||||||||||||| ||| |||||||| || ||| || ||||||||| |||| | ||||||| ||| || ||||| | ||||| ||||||||||| || |
|
|
| T |
2340310 |
tgcattcctttgatatcttaaatccaacacctgatgctgttgatatgagtgaagcctttggatcaacgaattccaaagctactccacttgagattctcat |
2340409 |
T |
 |
| Q |
366 |
taagccacgtttgtcttcgaattgctatgaaattatgtgat |
406 |
Q |
| |
|
||| |||||||||||| ||||| ||||| ||||||||| |
|
|
| T |
2340410 |
taaaccacgtttgtctcacaattgttatgagtttatgtgat |
2340450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 66 - 319
Target Start/End: Complemental strand, 2261413 - 2261160
Alignment:
| Q |
66 |
aaatctttggaagattcacactgatccaaatgtttggtcagatccattggaattcaaaccagagcggtttcttactacccataaagatgttgatgttaga |
165 |
Q |
| |
|
|||||||||||| ||||| || ||||||| | ||||| |||||||||| || ||||||||||| | |||||||| || || ||| ||||||||| | |
|
|
| T |
2261413 |
aaatctttggaaaattcaaaccgatccaagtatttggccagatccattagagttcaaaccagaaagatttcttaccactcacaaaaatgttgatgccaag |
2261314 |
T |
 |
| Q |
166 |
ggtaatcattttgagctattaccatttggaggtggtagaagaatttgcccaggaatgtcatttggccttcaaatggtgcatttaactttggctagttttt |
265 |
Q |
| |
|
||| | ||||||||| | |||||||||||| |||||||||| || || |||||||| || ||||| ||||| ||| | |||||||||||||||| ||||| |
|
|
| T |
2261313 |
ggtcaacattttgagttgttaccatttggaagtggtagaaggatatgtccaggaatatcttttggtcttcatatgattcatttaactttggctaattttt |
2261214 |
T |
 |
| Q |
266 |
tgcattcctttgaaatcgtaaatccatcaagtgaacctattgatatgactgaaa |
319 |
Q |
| |
|
| || ||||||||||| |||||| ||| ||||||||| ||||||||||||||| |
|
|
| T |
2261213 |
tacactcctttgaaattgtaaatggatctagtgaacctgttgatatgactgaaa |
2261160 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 26 - 403
Target Start/End: Original strand, 2357839 - 2358216
Alignment:
| Q |
26 |
taggtggatatgatgtaagaaaaggaacacggttaattttaaatctttggaagattcacactgatccaaatgtttggtcagatccattggaattcaaacc |
125 |
Q |
| |
|
||||||| |||||||| | ||||||||| || |||| |||||||||||||| || || || || | ||||||||||| |||||||| | || ||||| |
|
|
| T |
2357839 |
taggtggttatgatgtcataaaaggaactcgactaatcttaaatctttggaaaatccaaacagaccataatgtttggtcggatccattaaagtttaaacc |
2357938 |
T |
 |
| Q |
126 |
agagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggaggtggtagaagaatttgcccaggaatgtca |
225 |
Q |
| |
|
||| | ||||||| || ||||||||||||||||| |||| ||| |||||| | |||||||||||| |||||||||| ||||| || | ||| || |
|
|
| T |
2357939 |
agaaagatttcttaacacttataaagatgttgatgttcgagggtgtcactttgagttgttaccatttggaagtggtagaaggatttgtcctgaaatatct |
2358038 |
T |
 |
| Q |
226 |
tttggccttcaaatggtgcatttaactttggctagttttttgcattcctttgaaatcgtaaatccatcaagtgaacctattgatatgactgaaacttttg |
325 |
Q |
| |
|
||||| || ||||| ||||||||| |||||||| |||||||||||| ||||||||| | || |||| ||||| |||||||||||||| ||| |||| |
|
|
| T |
2358039 |
tttggactagaaatgatgcatttaattttggctaattttttgcattcatttgaaatcttgtattcatcgagtgagcctattgatatgacagaagtctttg |
2358138 |
T |
 |
| Q |
326 |
gattaaccaacaccaaaacaactcctcttgagattcttattaagccacgtttgtcttcgaattgctatgaaattatgt |
403 |
Q |
| |
|
|||| || | ||||| | || || ||||||||||| |||| ||| |||||||| |||||||| |||| ||||| |
|
|
| T |
2358139 |
gattgacggtctccaaagctaccccacttgagattctggttaaaccatgtttgtctgttaattgctacgaaactatgt |
2358216 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 73 - 235
Target Start/End: Complemental strand, 14711465 - 14711303
Alignment:
| Q |
73 |
tggaagattcacactgatccaaatgtttggtcagatccattggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatc |
172 |
Q |
| |
|
|||||||| || |||||||| | ||||||| | ||||||||||| |||||||| ||| | |||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
14711465 |
tggaagatccaaactgatcctagtgtttggccggatccattggagttcaaacctgagagatttcttacaactcataaagatgttgatgttagaggtaatc |
14711366 |
T |
 |
| Q |
173 |
attttgagctattaccatttggaggtggtagaagaatttgcccaggaatgtcatttggccttc |
235 |
Q |
| |
|
|||||||||| |||||||||||| |||| ||||| || || || ||||| || |||| ||||| |
|
|
| T |
14711365 |
attttgagcttttaccatttggaagtggaagaaggatgtgtcctggaatatcctttgcccttc |
14711303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 14753512 - 14753374
Alignment:
| Q |
97 |
gtttggtcagatccattggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggag |
196 |
Q |
| |
|
|||||| | ||||||||||| ||||| || | | | |||||||| || ||||||||||||||||||| ||| ||||||||||| | |||||||||||| |
|
|
| T |
14753512 |
gtttggccggatccattggagttcaagcctgggagatttcttacaactcataaagatgttgatgttaagggtcatcattttgagtttttaccatttggaa |
14753413 |
T |
 |
| Q |
197 |
gtggtagaagaatttgcccaggaatgtcatttggccttc |
235 |
Q |
| |
|
|||| ||||| ||||| || ||||| || |||||||||| |
|
|
| T |
14753412 |
gtggaagaaggatttgtcctggaatatcctttggccttc |
14753374 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 206
Target Start/End: Original strand, 2297361 - 2297470
Alignment:
| Q |
97 |
gtttggtcagatccattggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggag |
196 |
Q |
| |
|
||||||||||||||||| ||||| ||||| || |||||||||| || | |||||||||||| || | ||| | |||||||| | || ||||||||| |
|
|
| T |
2297361 |
gtttggtcagatccattagaatttaaacctgaaaggtttcttaccactaacaaagatgttgatcttgggggtcaaaattttgagttgttgccatttggaa |
2297460 |
T |
 |
| Q |
197 |
gtggtagaag |
206 |
Q |
| |
|
|||| ||||| |
|
|
| T |
2297461 |
gtggaagaag |
2297470 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 163; Significance: 7e-87; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 24 - 422
Target Start/End: Original strand, 4305850 - 4306248
Alignment:
| Q |
24 |
tttaggtggatatgatgtaagaaaaggaacacggttaattttaaatctttggaagattcacactgatccaaatgtttggtcagatccattggaattcaaa |
123 |
Q |
| |
|
||||||||| |||||||| | ||||||||| | |||| | ||||| |||||||| || |||||||| || ||||||| ||| || || || |||||| |
|
|
| T |
4305850 |
tttaggtggttatgatgtcaaaaaaggaactagactaatcatgaatctatggaagatccatactgatcctaaggtttggttagaacctttagagttcaaa |
4305949 |
T |
 |
| Q |
124 |
ccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggaggtggtagaagaatttgcccaggaatgt |
223 |
Q |
| |
|
||||| |||||||||||||| ||||||| ||||||||||| ||| ||||||||||| |||||||||||||| |||||||||| ||||| |||||||| | |
|
|
| T |
4305950 |
ccagaacggtttcttactactcataaaggtgttgatgttaagggtcatcattttgagttattaccatttggaagtggtagaaggatttgtccaggaatat |
4306049 |
T |
 |
| Q |
224 |
catttggccttcaaatggtgcatttaactttggctagttttttgcattcctttgaaatcgtaaatccatcaagtgaacctattgatatgactgaaacttt |
323 |
Q |
| |
|
| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||||||||||| |||| |
|
|
| T |
4306050 |
cttatggccttcaaatggtgcatttatctttggctagttttttgcattcctttgaaatctcaaaggcatcagctgaacctattgatatgactgaagcttt |
4306149 |
T |
 |
| Q |
324 |
tggattaaccaacaccaaaacaactcctcttgagattcttattaagccacgtttgtcttcgaattgctatgaaattatgtgatctgtgtgctagcttta |
422 |
Q |
| |
|
|||| | |||||| ||| ||||||| || ||||||||||||||||| |||||| |||| ||||| |||||| ||| |||||| ||| |||||||| |
|
|
| T |
4306150 |
tggaatcaccaaccacaaggcaactccactagagattcttattaagcctcgtttgccttctaattgttatgaagctatatgatctttgtattagcttta |
4306248 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 123; Significance: 5e-63; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 11 - 381
Target Start/End: Complemental strand, 5804429 - 5804059
Alignment:
| Q |
11 |
cagagaattgcagtttaggtggatatgatgtaagaaaaggaacacggttaattttaaatctttggaagattcacactgatccaaatgtttggtcagatcc |
110 |
Q |
| |
|
|||||||||||| ||||||||| ||| |||| | ||||||||| || ||||| ||||||||||||||| || || |||| | ||||||| || |||| |
|
|
| T |
5804429 |
cagagaattgcactttaggtggttatcatgttacaaaaggaactcgattaatcacaaatctttggaagatccaaacagatcttagtgtttggccaaatcc |
5804330 |
T |
 |
| Q |
111 |
attggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggaggtggtagaagaatt |
210 |
Q |
| |
|
||| || || || ||||| |||||||||| || ||||||||| |||||||||| |||||||||||||| ||| |||||||||| |||||||||| | |
|
|
| T |
5804329 |
attagattttaagccagaaaggtttcttacaactcataaagatattgatgttaggggtaatcattttgaactacaaccatttggaagtggtagaaggaaa |
5804230 |
T |
 |
| Q |
211 |
tgcccaggaatgtcatttggccttcaaatggtgcatttaactttggctagttttttgcattcctttgaaatcgtaaatccatcaagtgaacctattgata |
310 |
Q |
| |
|
|| || ||||| | ||||| ||||||||||||||||| ||| | ||||||||||||||||||||||| ||| |||||||| || ||||| |||||||| |
|
|
| T |
5804229 |
tgtcctggaatatgttttggacttcaaatggtgcattttactctagctagttttttgcattcctttgatatcttaaatccaacacctgaacttattgata |
5804130 |
T |
 |
| Q |
311 |
tgactgaaacttttggattaaccaacaccaaaacaactcctcttgagattcttattaagccacgtttgtct |
381 |
Q |
| |
|
|||||||| ||||||||||| || | |||| | ||||| ||||| ||||| ||||| |||||||||||| |
|
|
| T |
5804129 |
tgactgaagaatttggattaacaaatagcaaagctactccacttgaaattctcattaaaccacgtttgtct |
5804059 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0408 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0408
Description:
Target: scaffold0408; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 106 - 235
Target Start/End: Original strand, 560 - 689
Alignment:
| Q |
106 |
gatccattggaattcaaaccagagcggtttcttactacccataaagatgttgatgttagaggtaatcattttgagctattaccatttggaggtggtagaa |
205 |
Q |
| |
|
||||||||||| ||||| || | | | |||||||| || ||||||||||||||||||| ||| ||||||||||| | |||||||||||| |||| |||| |
|
|
| T |
560 |
gatccattggagttcaagcctgggagatttcttacaactcataaagatgttgatgttaagggtcatcattttgagtttttaccatttggaagtggaagaa |
659 |
T |
 |
| Q |
206 |
gaatttgcccaggaatgtcatttggccttc |
235 |
Q |
| |
|
| ||||| || ||||| || |||||||||| |
|
|
| T |
660 |
ggatttgtcctggaatatcctttggccttc |
689 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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