View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11160_low_1 (Length: 885)

Name: NF11160_low_1
Description: NF11160
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11160_low_1
NF11160_low_1
[»] chr5 (25 HSPs)
chr5 (7-596)||(37430426-37431015)
chr5 (612-659)||(32872785-32872832)
chr5 (608-660)||(36562936-36562988)
chr5 (736-787)||(24486894-24486944)
chr5 (729-767)||(34379482-34379520)
chr5 (727-788)||(5007734-5007794)
chr5 (729-766)||(32912068-32912105)
chr5 (726-766)||(11954461-11954501)
chr5 (610-650)||(16971985-16972025)
chr5 (2-54)||(37698457-37698509)
chr5 (729-788)||(4434479-4434537)
chr5 (729-788)||(14206397-14206455)
chr5 (729-764)||(22649666-22649701)
chr5 (729-787)||(3640201-3640258)
chr5 (612-650)||(11954577-11954615)
chr5 (731-788)||(14923080-14923135)
chr5 (729-787)||(32732123-32732180)
chr5 (729-767)||(40829443-40829481)
chr5 (730-767)||(6940155-6940192)
chr5 (733-766)||(7076577-7076610)
chr5 (729-766)||(8675437-8675474)
chr5 (729-766)||(14532534-14532571)
chr5 (610-659)||(31748473-31748522)
chr5 (729-766)||(34124651-34124688)
chr5 (729-786)||(43153065-43153121)
[»] chr7 (27 HSPs)
chr7 (609-660)||(29723809-29723860)
chr7 (611-660)||(2008718-2008767)
chr7 (732-788)||(26749014-26749068)
chr7 (612-660)||(12007073-12007121)
chr7 (612-660)||(15325527-15325575)
chr7 (609-660)||(37352246-37352297)
chr7 (729-787)||(11352978-11353035)
chr7 (729-767)||(18111616-18111654)
chr7 (724-766)||(46880932-46880974)
chr7 (615-660)||(28249460-28249505)
chr7 (729-785)||(33465044-33465099)
chr7 (612-660)||(33845178-33845226)
chr7 (723-787)||(41985099-41985162)
chr7 (729-788)||(43942646-43942703)
chr7 (611-647)||(46881051-46881087)
chr7 (729-788)||(3937126-3937184)
chr7 (730-788)||(2323301-2323358)
chr7 (610-660)||(32777592-32777642)
chr7 (727-788)||(2469700-2469760)
chr7 (615-660)||(21103148-21103193)
chr7 (729-766)||(24532947-24532984)
chr7 (723-788)||(37351989-37352053)
chr7 (729-766)||(40353294-40353331)
chr7 (611-660)||(43807699-43807748)
chr7 (729-786)||(45420065-45420121)
chr7 (729-766)||(47145077-47145114)
chr7 (729-786)||(49142522-49142578)
[»] chr4 (30 HSPs)
chr4 (612-660)||(39158241-39158289)
chr4 (612-660)||(51255882-51255930)
chr4 (612-660)||(18316073-18316121)
chr4 (733-786)||(25318073-25318128)
chr4 (612-660)||(38519929-38519977)
chr4 (613-650)||(21014143-21014180)
chr4 (729-766)||(40348823-40348860)
chr4 (729-785)||(48335564-48335621)
chr4 (609-650)||(55266171-55266212)
chr4 (724-784)||(5386385-5386444)
chr4 (612-660)||(29227130-29227178)
chr4 (729-784)||(9095949-9096003)
chr4 (612-659)||(22813609-22813656)
chr4 (729-795)||(39605969-39606033)
chr4 (729-788)||(43769720-43769778)
chr4 (729-787)||(28657445-28657502)
chr4 (729-787)||(37727059-37727117)
chr4 (724-766)||(39158135-39158177)
chr4 (729-767)||(49585023-49585061)
chr4 (727-761)||(56557768-56557802)
chr4 (729-766)||(149489-149526)
chr4 (729-785)||(1580288-1580342)
chr4 (731-787)||(4106052-4106106)
chr4 (730-787)||(4949516-4949572)
chr4 (729-766)||(7627878-7627915)
chr4 (729-766)||(26206981-26207018)
chr4 (611-660)||(26600085-26600134)
chr4 (729-786)||(31657657-31657713)
chr4 (727-764)||(41262347-41262384)
chr4 (729-785)||(50608629-50608683)
[»] chr3 (23 HSPs)
chr3 (612-660)||(29525999-29526047)
chr3 (727-785)||(9753230-9753287)
chr3 (610-660)||(34307426-34307476)
chr3 (612-660)||(4494124-4494172)
chr3 (729-791)||(19148996-19149056)
chr3 (729-784)||(35377086-35377141)
chr3 (729-788)||(50745557-50745615)
chr3 (724-766)||(38671647-38671689)
chr3 (729-788)||(3281720-3281778)
chr3 (615-650)||(27168572-27168607)
chr3 (727-786)||(47683800-47683858)
chr3 (729-788)||(49361840-49361898)
chr3 (729-788)||(49761316-49761374)
chr3 (730-764)||(10464975-10465009)
chr3 (729-787)||(29846896-29846953)
chr3 (729-766)||(3953479-3953516)
chr3 (729-766)||(24095410-24095447)
chr3 (733-785)||(24256780-24256830)
chr3 (729-786)||(28700471-28700527)
chr3 (729-786)||(35368621-35368677)
chr3 (759-788)||(38470597-38470626)
chr3 (615-660)||(39713927-39713972)
chr3 (729-766)||(50314654-50314691)
[»] chr8 (23 HSPs)
chr8 (612-659)||(33451452-33451499)
chr8 (612-660)||(1068742-1068790)
chr8 (730-786)||(7010684-7010739)
chr8 (729-787)||(9963694-9963752)
chr8 (611-650)||(42652739-42652778)
chr8 (723-788)||(40413348-40413412)
chr8 (729-785)||(6243045-6243100)
chr8 (612-660)||(15716863-15716911)
chr8 (612-660)||(33107754-33107802)
chr8 (612-660)||(34435624-34435672)
chr8 (612-660)||(44091022-44091070)
chr8 (729-788)||(14710898-14710956)
chr8 (613-644)||(36874001-36874032)
chr8 (729-784)||(39211054-39211108)
chr8 (730-783)||(17823469-17823520)
chr8 (729-767)||(28756564-28756602)
chr8 (729-787)||(30439510-30439567)
chr8 (729-787)||(37392133-37392190)
chr8 (733-766)||(8645195-8645228)
chr8 (610-659)||(11134720-11134769)
chr8 (724-761)||(34435736-34435773)
chr8 (729-790)||(38939194-38939254)
chr8 (729-766)||(41520998-41521035)
[»] chr2 (23 HSPs)
chr2 (612-650)||(26480977-26481015)
chr2 (399-445)||(41265762-41265808)
chr2 (610-660)||(44239172-44239222)
chr2 (611-660)||(2427885-2427934)
chr2 (607-660)||(11965929-11965982)
chr2 (730-787)||(42607536-42607592)
chr2 (729-788)||(6049349-6049408)
chr2 (729-788)||(10711733-10711791)
chr2 (611-660)||(37731086-37731135)
chr2 (729-785)||(37737982-37738036)
chr2 (616-660)||(14877125-14877169)
chr2 (612-660)||(31578570-31578618)
chr2 (612-660)||(37316702-37316750)
chr2 (732-784)||(13265975-13266029)
chr2 (758-789)||(17569749-17569780)
chr2 (724-767)||(19916684-19916727)
chr2 (724-763)||(37003643-37003682)
chr2 (730-788)||(6646832-6646889)
chr2 (729-767)||(21738620-21738658)
chr2 (729-767)||(40210072-40210110)
chr2 (729-786)||(22296134-22296190)
chr2 (729-786)||(22353180-22353236)
chr2 (724-761)||(37731199-37731236)
[»] chr1 (31 HSPs)
chr1 (612-650)||(4213218-4213256)
chr1 (616-660)||(7918953-7918997)
chr1 (729-785)||(47398456-47398511)
chr1 (612-660)||(47642494-47642542)
chr1 (612-660)||(48983555-48983603)
chr1 (609-660)||(38878785-38878836)
chr1 (730-788)||(50797788-50797845)
chr1 (730-766)||(8846003-8846039)
chr1 (729-785)||(18336158-18336213)
chr1 (612-660)||(27742745-27742793)
chr1 (612-660)||(40439727-40439775)
chr1 (612-660)||(42468728-42468776)
chr1 (729-785)||(51718631-51718687)
chr1 (729-788)||(8200084-8200142)
chr1 (729-788)||(11121489-11121547)
chr1 (729-788)||(38303692-38303751)
chr1 (729-788)||(40596059-40596117)
chr1 (729-788)||(48325783-48325841)
chr1 (730-788)||(611641-611698)
chr1 (724-766)||(4213102-4213144)
chr1 (724-786)||(4857921-4857982)
chr1 (729-787)||(33358163-33358220)
chr1 (723-785)||(37690429-37690490)
chr1 (733-790)||(48103398-48103453)
chr1 (729-767)||(52437523-52437561)
chr1 (729-766)||(5771752-5771789)
chr1 (729-766)||(40328745-40328782)
chr1 (730-767)||(46281465-46281502)
chr1 (729-786)||(48220148-48220204)
chr1 (611-660)||(48858959-48859008)
chr1 (733-766)||(50824771-50824804)
[»] chr6 (9 HSPs)
chr6 (610-650)||(17182244-17182284)
chr6 (399-450)||(34260975-34261026)
chr6 (612-650)||(1287059-1287097)
chr6 (612-660)||(33712456-33712504)
chr6 (729-764)||(5570338-5570373)
chr6 (612-659)||(5739651-5739698)
chr6 (610-660)||(8645444-8645494)
chr6 (727-761)||(34442065-34442099)
chr6 (615-660)||(18064980-18065025)
[»] scaffold0204 (1 HSPs)
scaffold0204 (729-785)||(23086-23143)
[»] scaffold0201 (1 HSPs)
scaffold0201 (611-660)||(8608-8657)
[»] scaffold0618 (1 HSPs)
scaffold0618 (612-660)||(8840-8888)
[»] scaffold0276 (1 HSPs)
scaffold0276 (729-787)||(1656-1711)
[»] scaffold0184 (1 HSPs)
scaffold0184 (612-660)||(13444-13492)
[»] scaffold0078 (1 HSPs)
scaffold0078 (612-660)||(59352-59400)
[»] scaffold0034 (1 HSPs)
scaffold0034 (614-654)||(101790-101830)
[»] scaffold0054 (1 HSPs)
scaffold0054 (729-787)||(31605-31662)


Alignment Details
Target: chr5 (Bit Score: 542; Significance: 0; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 542; E-Value: 0
Query Start/End: Original strand, 7 - 596
Target Start/End: Original strand, 37430426 - 37431015
Alignment:
Q  7 gtgaaaggcaagataaggaaatagaaaacaaaaggaccccatttagaggaaattatactctcttgtttaggattttggatttgattattttagcctatat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||  |||||||||||||||||| |||    
T  37430426 gtgaaaggcaagataaggaaatagaaaacaaaaggaccccatttagaggaaactatactctcttcttgaggattttttatttgattattttagcctctat 37430525  T
Q  107 ctatagaggttatgaagaggtttgaaagatgcagaagcatgacctacaaagcattgattgcaaacatatagtagttgataagaagaatgaataagggaaa 206  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  37430526 ctatagatgttatgaagaggtttgaaagatgcagaagcatgacctactaagcattgattgcaaccatatagtagttgataagcagaatgaatcagggaaa 37430625  T
Q  207 agaatattgcatatatgtcttattctctttgtatttgaaattgtggtagtcttgtcttgtgcattggactattagtgttttcctgtcctggtttgacaaa 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430626 agaatattgcatatatgtcttattctctttgtatttgaaattgtggtagtcttgtcttgtgcattggactattagtgttttcctgtcctggtttgacaaa 37430725  T
Q  307 tcttttctggtgttctggtttgacaaatcttaatgctttacctatacagtgtttaattcgttaatagaacaattcctatgatcacaatttccaaattaat 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37430726 tcttttctggtgttctggtttgacaaatcttaatgctttacctatacagtgtttaattcgttaatagaataattcctatgatcacaatttccaaattaat 37430825  T
Q  407 cttgtttcgtgtataaattaagacatttacattcacattccatatttgttactgataaatttatgctgcatgctaaattttagaagtatttaatttgaat 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430826 cttgtttcgtgtataaattaagacatttacattcacattccatatttgttactgataaatttatgctgcatgctaaattttagaagtatttaatttgaat 37430925  T
Q  507 aagcatatgcaaatagtactttgtaaattataaaccaaatgaaataattagtcattcagtttcattgttactaatatcacaatatactgt 596  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37430926 aagcatatgcaaatagtactttgtaaattataaaccaaatgaaataattagtcattcagtttcattgttactaatatcacaatatactgt 37431015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 612 - 659
Target Start/End: Original strand, 32872785 - 32872832
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 659  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  32872785 gagcaatgttatttgaacaaccctttcttgtgacaacttgttggacaa 32872832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 608 - 660
Target Start/End: Original strand, 36562936 - 36562988
Alignment:
Q  608 caatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||||||    
T  36562936 caatgaggaatgttatttgaacaaccctttgttgggacaacttgttggacaac 36562988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 736 - 787
Target Start/End: Complemental strand, 24486944 - 24486894
Alignment:
Q  736 gtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    |||||||| ||||||||||  |||||||||||||||||||||||||||||||    
T  24486944 gtatgagaaagaaaattgta-caaaaattattgttcaaatatcatttctctt 24486894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 729 - 767
Target Start/End: Complemental strand, 34379520 - 34379482
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  34379520 aatgtgagtatgagagagaaaattgtcacaaaaattatt 34379482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 727 - 788
Target Start/End: Original strand, 5007734 - 5007794
Alignment:
Q  727 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||| || |||||| ||||||||||||| ||||| || |||||||||||||||||||||||    
T  5007734 acaatatgtgtatgaaagagaaaattgtcacaaaa-ttgttgttcaaatatcatttctcttt 5007794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 729 - 766
Target Start/End: Complemental strand, 32912105 - 32912068
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  32912105 aatgtgagtatgagagagaaaattgtcacaaaaattat 32912068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 726 - 766
Target Start/End: Complemental strand, 11954501 - 11954461
Alignment:
Q  726 aacaatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  11954501 aacaatgtgagtatgagagagaaagttgtcacaaaaattat 11954461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 610 - 650
Target Start/End: Original strand, 16971985 - 16972025
Alignment:
Q  610 atgagcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    |||||||||||||||||||||| | ||||||||||||||||    
T  16971985 atgagcaatgttatttgaacaatcatttattgtgacaactt 16972025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 54
Target Start/End: Original strand, 37698457 - 37698509
Alignment:
Q  2 aaaaggtgaaaggcaagataaggaaatagaaaacaaaaggaccccatttagag 54  Q
    |||| ||||||||||| |||||| ||||||| | |||||||||||||||||||    
T  37698457 aaaaagtgaaaggcaaaataaggcaatagaataaaaaaggaccccatttagag 37698509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 4434537 - 4434479
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||| |||||||||  ||||||  |||| ||||||||||||||||||    
T  4434537 aatgtgagtatgagagaaaaaattgtc-aaaaaatggttgtacaaatatcatttctcttt 4434479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 14206455 - 14206397
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| |||||  ||||||  |||| ||||||||||||||||||    
T  14206455 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctcttt 14206397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 764
Target Start/End: Original strand, 22649666 - 22649701
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaatt 764  Q
    ||||||||||||||||||||||||||| ||||||||    
T  22649666 aatgtgagtatgagagagaaaattgtcacaaaaatt 22649701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 3640201 - 3640258
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  3640201 aatgtgagtatgagagagaaagttgtctc-aaaatagatgttcaaatatcatttctctt 3640258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 650
Target Start/End: Complemental strand, 11954615 - 11954577
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  11954615 gagcaatgttatttgaacaaccatttattttgacaactt 11954577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 731 - 788
Target Start/End: Complemental strand, 14923135 - 14923080
Alignment:
Q  731 tgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||| ||||   ||||||  |||||||||||||||||||||||    
T  14923135 tgtgagtatgagagagaaagttgta--aaaaatggttgttcaaatatcatttctcttt 14923080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 32732123 - 32732180
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| ||||||| |||||||||    
T  32732123 aatgtgagtatgagagagaaagttgt-acaaaaatgattgtacaaatataatttctctt 32732180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 767
Target Start/End: Complemental strand, 40829481 - 40829443
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  40829481 aatgtgagtatgagagaaaaaattgtcacaaaaattatt 40829443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 730 - 767
Target Start/End: Original strand, 6940155 - 6940192
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  6940155 atgtgagtatgagagagaaagttgtcacaaaaattatt 6940192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 766
Target Start/End: Original strand, 7076577 - 7076610
Alignment:
Q  733 tgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||||| ||||||||||    
T  7076577 tgagtatgagagagaaaattgtcacaaaaattat 7076610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 8675437 - 8675474
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  8675437 aatgtgagtatgagagagaaaattgttgcaaaagttat 8675474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Complemental strand, 14532571 - 14532534
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  14532571 aatgtgagtatgagagagaaagttgtcacaaaaattat 14532534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 659
Target Start/End: Complemental strand, 31748522 - 31748473
Alignment:
Q  610 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 659  Q
    |||||| ||||||||||||||| | ||| |||||||||||| ||||||||    
T  31748522 atgagcgatgttatttgaacaatcattttttgtgacaacttattggacaa 31748473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Complemental strand, 34124688 - 34124651
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||| || ||||||||||    
T  34124688 aatgtgagtatgagagagaaaattatcacaaaaattat 34124651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Original strand, 43153065 - 43153121
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||| ||||||||||||| ||||  |||||||| |||| ||||||||||||||||    
T  43153065 aatgtgaatatgagagagaaagttgta-caaaaattgttgtacaaatatcatttctct 43153121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 609 - 660
Target Start/End: Original strand, 29723809 - 29723860
Alignment:
Q  609 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29723809 aatgagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 29723860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 611 - 660
Target Start/End: Original strand, 2008718 - 2008767
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||||||| |||  |||||||||||||||||||||    
T  2008718 tgagcaatgttatttgaacaaccattttatgtgacaacttgttggacaac 2008767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 732 - 788
Target Start/End: Complemental strand, 26749068 - 26749014
Alignment:
Q  732 gtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    |||||||||||||||||| |||||  ||||||| |||||||||||||||||||||||    
T  26749068 gtgagtatgagagagaaagttgtc--aaaaattgttgttcaaatatcatttctcttt 26749014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 12007073 - 12007121
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  12007073 gagcaatgttatttgtacaactatttattgtgacaacttgttggacaac 12007121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 15325527 - 15325575
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  15325527 gagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 15325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 609 - 660
Target Start/End: Complemental strand, 37352297 - 37352246
Alignment:
Q  609 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||||||||| ||| ||||  ||||||||||||||||    
T  37352297 aatgagcaatgttatttgaacaaccatttcttgtaccaacttgttggacaac 37352246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 11352978 - 11353035
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| ||||| | ||||||  |||||||||||||||||||||    
T  11352978 aatgtgagtatgagagagaaagttgtcac-aaaattgatgttcaaatatcatttctctt 11353035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 729 - 767
Target Start/End: Original strand, 18111616 - 18111654
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  18111616 aatgtgagtatgagagagaaaattgtcacaaaaattatt 18111654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Complemental strand, 46880974 - 46880932
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  46880974 agaacaatatgagtatgagagagaaaattatcgcaaaaattat 46880932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 615 - 660
Target Start/End: Original strand, 28249460 - 28249505
Alignment:
Q  615 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||| ||| |||||||||||| |||||||||    
T  28249460 caatgttatttgaacaaccatttcttgtgacaactttttggacaac 28249505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 785
Target Start/End: Original strand, 33465044 - 33465099
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||||||||||||||||||||  |||||||  |||| |||||||||||||||    
T  33465044 aatgtgagtatgagagagaaaattgt-acaaaaatggttgtacaaatatcatttctc 33465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 33845226 - 33845178
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  33845226 gagcaatgttatttgaacaaccttttcatgtgacaatttgttggacaac 33845178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 723 - 787
Target Start/End: Original strand, 41985099 - 41985162
Alignment:
Q  723 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||| ||||||||||||||||||||| ||||| | ||| | ||||| |||||||||||||||||    
T  41985099 gagaataatgtgagtatgagagagaaagttgtcac-aaattgattgtacaaatatcatttctctt 41985162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 43942703 - 43942646
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||   ||||||  |||||||||||||||||||||||    
T  43942703 aatgtgagtatgagagagaaagttgta--aaaaatagttgttcaaatatcatttctcttt 43942646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 611 - 647
Target Start/End: Complemental strand, 46881087 - 46881051
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaa 647  Q
    |||||||||||||||||||||||||||||| ||||||    
T  46881087 tgagcaatgttatttgaacaaccctttattatgacaa 46881051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 3937126 - 3937184
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  3937126 aatgtgagtatgagagagaaagttgtcac-aaaatagatgttcaaatatcatttctcttt 3937184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 730 - 788
Target Start/End: Complemental strand, 2323358 - 2323301
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    |||||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||    
T  2323358 atgtgagtatgagagagaaagttgtcataaaa-ttgttgtacaaatatcatttctcttt 2323301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 610 - 660
Target Start/End: Original strand, 32777592 - 32777642
Alignment:
Q  610 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| | ||| |||| | |||||||||||||||    
T  32777592 atgagcaatgttatttgaacaatcttttcttgtaataacttgttggacaac 32777642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 788
Target Start/End: Complemental strand, 2469760 - 2469700
Alignment:
Q  727 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||||| ||||| | ||| |  |||| ||||||||||||||||||    
T  2469760 acaatgtgagtatgagagagaaagttgtcac-aaagtggttgtacaaatatcatttctcttt 2469700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 660
Target Start/End: Complemental strand, 21103193 - 21103148
Alignment:
Q  615 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||| ||||||||||||| ||| |||||| |||||||||||||||    
T  21103193 caatgatatttgaacaaccatttcttgtgataacttgttggacaac 21103148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 24532947 - 24532984
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||| ||||||||| ||||||||||    
T  24532947 aatgtgagtatgagagaaaaaattgtcacaaaaattat 24532984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 723 - 788
Target Start/End: Original strand, 37351989 - 37352053
Alignment:
Q  723 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||| ||||||||||||||||||||| ||||| | ||| |  |||| ||||||||||||||||||    
T  37351989 gagaataatgtgagtatgagagagaaagttgtcac-aaagtggttgtacaaatatcatttctcttt 37352053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Complemental strand, 40353331 - 40353294
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  40353331 aatgtgagtatgagagagaaagttgttgcaaaaattat 40353294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 660
Target Start/End: Original strand, 43807699 - 43807748
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||| |||||||||||||||||||| || |||||| |||||| |||||    
T  43807699 tgagcagtgttatttgaacaaccctttcttatgacaatttgttgtacaac 43807748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Original strand, 45420065 - 45420121
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||| ||||||||||||| |||||  ||||||  |||||||||||||||||||||    
T  45420065 aatgtgaatatgagagagaaagttgtca-aaaaatagttgttcaaatatcatttctct 45420121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 47145077 - 47145114
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  47145077 aatgtgagtgtgagagagaaaattgtcacaaaaattat 47145114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Original strand, 49142522 - 49142578
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    |||||||||||||||||||||||| |  |||||||  |||| ||||||||||||||||    
T  49142522 aatgtgagtatgagagagaaaatt-ttacaaaaatggttgtacaaatatcatttctct 49142578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 39158289 - 39158241
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||||||||||||||| |||||||||    
T  39158289 gagcaatgttatttgaacaaccatttattgtgacaacttattggacaac 39158241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 51255930 - 51255882
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  51255930 gagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 51255882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 18316121 - 18316073
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||    
T  18316121 gagcaatgttatttgaacaaccatttcttatgacaacttgttggacaac 18316073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 786
Target Start/End: Original strand, 25318073 - 25318128
Alignment:
Q  733 tgagtatgagagagaaaattgtcgcaaaaattat--tgttcaaatatcatttctct 786  Q
    ||||||||||||||||||||||||||||| ||||  | ||||||||||||||||||    
T  25318073 tgagtatgagagagaaaattgtcgcaaaagttatcatattcaaatatcatttctct 25318128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 38519977 - 38519929
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  38519977 gagcaatgttatttgtataaccatttattgtgacaacttgttggacaac 38519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 613 - 650
Target Start/End: Complemental strand, 21014180 - 21014143
Alignment:
Q  613 agcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  21014180 agcaatgttatttgaacaaccttttattgtgacaactt 21014143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 729 - 766
Target Start/End: Complemental strand, 40348860 - 40348823
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  40348860 aatgtgagtatgagagagaaaattgtcacaaaaattat 40348823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 729 - 785
Target Start/End: Complemental strand, 48335621 - 48335564
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat-tgttcaaatatcatttctc 785  Q
    ||||||| |||||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  48335621 aatgtgaatatgagagagaaaattgttgcaaaaattgtatgttcgaatatcatttctc 48335564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 650
Target Start/End: Complemental strand, 55266212 - 55266171
Alignment:
Q  609 aatgagcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    ||||||||||||||||||||||| |||||||||||| |||||    
T  55266212 aatgagcaatgttatttgaacaatcctttattgtgataactt 55266171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 724 - 784
Target Start/End: Complemental strand, 5386444 - 5386385
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 784  Q
    |||| ||||||||||||||||||||| |||||  ||||||  |||||||||||||||||||    
T  5386444 agaataatgtgagtatgagagagaaagttgtc-aaaaaatggttgttcaaatatcatttct 5386385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 29227130 - 29227178
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  29227130 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 29227178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 784
Target Start/End: Complemental strand, 9096003 - 9095949
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 784  Q
    ||||||||||||||||||||||||||  ||||||| ||||| |||||| |||||||    
T  9096003 aatgtgagtatgagagagaaaattgt-acaaaaataattgtacaaataacatttct 9095949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 659
Target Start/End: Original strand, 22813609 - 22813656
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 659  Q
    |||||||||||||| ||||||  ||| |||||||||||||||||||||    
T  22813609 gagcaatgttatttaaacaactttttcttgtgacaacttgttggacaa 22813656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 795
Target Start/End: Complemental strand, 39606033 - 39605969
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttcattatt 795  Q
    ||||||||||||||||||||| ||||  |||||||  ||||||| ||||||||||||| | ||||||    
T  39606033 aatgtgagtatgagagagaaagttgt--caaaaatggttgttcatatatcatttctctattattatt 39605969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 43769778 - 43769720
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  43769778 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 43769720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 28657445 - 28657502
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  28657445 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 28657502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 37727059 - 37727117
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    |||||||||||||||||| ||||| ||  |||| | ||||| |||||||||||||||||    
T  37727059 aatgtgagtatgagagagcaaattatcaaaaaattgattgtacaaatatcatttctctt 37727117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 724 - 766
Target Start/End: Complemental strand, 39158177 - 39158135
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||| ||||||||||||||||||||| ||||| ||||||||||    
T  39158177 agaataatgtgagtatgagagagaaagttgtcacaaaaattat 39158135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 767
Target Start/End: Complemental strand, 49585061 - 49585023
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  49585061 aatgtgagtatgagagagaaagttgtcccaaaaattatt 49585023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 727 - 761
Target Start/End: Complemental strand, 56557802 - 56557768
Alignment:
Q  727 acaatgtgagtatgagagagaaaattgtcgcaaaa 761  Q
    ||||||||||||||||||||||||||||| |||||    
T  56557802 acaatgtgagtatgagagagaaaattgtcacaaaa 56557768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 149489 - 149526
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  149489 aatgtgagtatgagagagaaagttgtcacaaaaattat 149526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 785
Target Start/End: Original strand, 1580288 - 1580342
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||||||||||||||||||||  || ||| | |||| |||||||||||||||    
T  1580288 aatgtgagtatgagagagaaaattgt--cacaaagtgttgtacaaatatcatttctc 1580342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 731 - 787
Target Start/End: Complemental strand, 4106106 - 4106052
Alignment:
Q  731 tgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||||||   |||||  ||||| |||||||||||||||||    
T  4106106 tgtgagtatgagagagaaaattgt--aaaaaaaaattgtacaaatatcatttctctt 4106052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 730 - 787
Target Start/End: Complemental strand, 4949572 - 4949516
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    |||||||||||||||||||| ||||| |  |||| | |||||||||||||||||||||    
T  4949572 atgtgagtatgagagagaaagttgtcac-caaatgaatgttcaaatatcatttctctt 4949516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Complemental strand, 7627915 - 7627878
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||| || ||||||||||    
T  7627915 aatgtgagtatgagagagaaaattatcacaaaaattat 7627878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 26206981 - 26207018
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||| |||||||||||||||||| |||||||||||    
T  26206981 aatgtgaatatgagagagaaaattgttgcaaaaattat 26207018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 660
Target Start/End: Original strand, 26600085 - 26600134
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||||||  |||  |||||||| ||||||||||||    
T  26600085 tgagcaatgttatttgaacaacatttttatgtgacaatttgttggacaac 26600134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Complemental strand, 31657713 - 31657657
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||    
T  31657713 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctct 31657657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 764
Target Start/End: Original strand, 41262347 - 41262384
Alignment:
Q  727 acaatgtgagtatgagagagaaaattgtcgcaaaaatt 764  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  41262347 acaatgtgagtaagagagagaaaattgttgcaaaaatt 41262384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 785
Target Start/End: Original strand, 50608629 - 50608683
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||||||| ||||||| |||||  |||||| ||||||||||||| |||||||    
T  50608629 aatgtgagtatgaaagagaaagttgtc--aaaaataattgttcaaatataatttctc 50608683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 29526047 - 29525999
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  29526047 gagcaatgttatttgtacaaccatttattgtgacaacttgttggacaac 29525999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 727 - 785
Target Start/End: Complemental strand, 9753287 - 9753230
Alignment:
Q  727 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||    
T  9753287 acaatgtgagtatgagagataaaattgtcac-aaaatgattgttcaaatatcatttctc 9753230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 610 - 660
Target Start/End: Original strand, 34307426 - 34307476
Alignment:
Q  610 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| ||||| |||||||||||| |||||||||    
T  34307426 atgagcaatgttatttgaacaatcctttcttgtgacaacttattggacaac 34307476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 4494124 - 4494172
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| ||| || |||||||||||||||||||    
T  4494124 gagcaatgttatttgaacaaccatttcttatgacaacttgttggacaac 4494172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 729 - 791
Target Start/End: Complemental strand, 19149056 - 19148996
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttcat 791  Q
    ||||||||||||||||||||| || |   |||||| |||||||||||||||||||||||||||    
T  19149056 aatgtgagtatgagagagaaagttata--aaaaatgattgttcaaatatcatttctctttcat 19148996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 729 - 784
Target Start/End: Original strand, 35377086 - 35377141
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 784  Q
    ||||||||| ||||||||||| ||||| ||||| || |||||||||||||||||||    
T  35377086 aatgtgagtgtgagagagaaagttgtcacaaaagttgttgttcaaatatcatttct 35377141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 50745615 - 50745557
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| ||||||||||||||||||    
T  50745615 aatgtgagtatgagagagaaagttgta-caaaaatgattgtacaaatatcatttctcttt 50745557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 724 - 766
Target Start/End: Complemental strand, 38671689 - 38671647
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||| |||||||||||||||| ||||||||||    
T  38671689 agaacaatgtgagtacgagagagaaaattgtcacaaaaattat 38671647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 3281720 - 3281778
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||| ||||||||| ||||| ||||| | | ||||||||||||||||||||||    
T  3281720 aatgtgagtataagagagaaagttgtcacaaaa-taaatgttcaaatatcatttctcttt 3281778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 650
Target Start/End: Original strand, 27168572 - 27168607
Alignment:
Q  615 caatgttatttgaacaaccctttattgtgacaactt 650  Q
    |||||||||||||||||||||||||| |||||||||    
T  27168572 caatgttatttgaacaaccctttattatgacaactt 27168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 727 - 786
Target Start/End: Complemental strand, 47683858 - 47683800
Alignment:
Q  727 acaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||||||||||||||| ||||| | |||||  |||| ||||||||||||||||    
T  47683858 acaatgtgagtatgagagagaaagttgtcac-aaaatggttgtacaaatatcatttctct 47683800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 49361840 - 49361898
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||| ||| ||||  ||||||| ||||| ||||||||||||||||||    
T  49361840 aatgtgagtatgagagaaaaagttgta-caaaaatgattgtacaaatatcatttctcttt 49361898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 49761374 - 49761316
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  49761374 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 49761316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 730 - 764
Target Start/End: Complemental strand, 10465009 - 10464975
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaatt 764  Q
    |||||||||||||||||||||||||| ||||||||    
T  10465009 atgtgagtatgagagagaaaattgtcacaaaaatt 10464975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 29846896 - 29846953
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| ||||  |||||||  |||| |||||||||||||||||    
T  29846896 aatgtgagtatgagagagaaagttgt-acaaaaatggttgtacaaatatcatttctctt 29846953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 3953479 - 3953516
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  3953479 aatgtgagtatgagagagaaagttgtcacaaaaattat 3953516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 24095410 - 24095447
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  24095410 aatgtgagtatgagagagaaagttgtcacaaaaattat 24095447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 785
Target Start/End: Original strand, 24256780 - 24256830
Alignment:
Q  733 tgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||| ||||||| |||||  |||||| |||||||||||||||||||||    
T  24256780 tgagtatgatagagaaatttgtc--aaaaatgattgttcaaatatcatttctc 24256830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Complemental strand, 28700527 - 28700471
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||||||||| ||| |||||  ||||||  |||||||||||||||||||||    
T  28700527 aatgtgagtatgagagataaagttgtca-aaaaatggttgttcaaatatcatttctct 28700471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Complemental strand, 35368677 - 35368621
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||||||||||||| ||||  |||||||  |||| ||||||||||||||||    
T  35368677 aatgtgagtatgagagagaaagttgt-acaaaaatagttgtacaaatatcatttctct 35368621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 759 - 788
Target Start/End: Original strand, 38470597 - 38470626
Alignment:
Q  759 aaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||||||||||||    
T  38470597 aaaattattgttcaaatatcatttctcttt 38470626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 660
Target Start/End: Original strand, 39713927 - 39713972
Alignment:
Q  615 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||| ||| |||||| || ||||||||||||    
T  39713927 caatgttatttgaacaaccattttttgtgataatttgttggacaac 39713972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Complemental strand, 50314691 - 50314654
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||||||| |||| ||||    
T  50314691 aatgtgagtatgagagagaaaattgtcgaaaaagttat 50314654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 612 - 659
Target Start/End: Original strand, 33451452 - 33451499
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 659  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||    
T  33451452 gagcaatgttatttgaacaaccctttcttgtgacaacttgttagacaa 33451499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 1068790 - 1068742
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  1068790 gagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 1068742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 730 - 786
Target Start/End: Complemental strand, 7010739 - 7010684
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||||||||||||||||||  |||||| ||||| ||||||||||||||||    
T  7010739 atgtgagtatgagagagaaaattgtc-aaaaaatgattgtacaaatatcatttctct 7010684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Complemental strand, 9963752 - 9963694
Alignment:
Q  729 aatgtgagtatga-gagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||| ||||||||||||||  |||||||||||| |||||||||||||||||    
T  9963752 aatgtgagtatgatgagagaaaattgtca-aaaaattattgtacaaatatcatttctctt 9963694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 611 - 650
Target Start/End: Complemental strand, 42652778 - 42652739
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  42652778 tgagcaatgttatttgaacaactctttattgtgacaactt 42652739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 723 - 788
Target Start/End: Original strand, 40413348 - 40413412
Alignment:
Q  723 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||| || |||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||    
T  40413348 gagaataacgtgagtatgagagagaaagttgtcac-aaaataattgtacaaatatcatttctcttt 40413412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 785
Target Start/End: Complemental strand, 6243100 - 6243045
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||||||||||||||| ||||  ||||||| ||||| |||||||||||||||    
T  6243100 aatgtgagtatgagagagaaagttgt-acaaaaatgattgtacaaatatcatttctc 6243045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 15716863 - 15716911
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||  |||  |||||||||||||||||||||    
T  15716863 gagcaatgttatttgaacaacttttttatgtgacaacttgttggacaac 15716911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 33107754 - 33107802
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  33107754 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 33107802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 34435624 - 34435672
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  34435624 gagcaatgttatttgaacaacctttttatgtgacaacttgttgcacaac 34435672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 44091070 - 44091022
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  44091070 gagcaatgttatttgaacaaccttttcatgtgacaactttttggacaac 44091022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 14710898 - 14710956
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||| | ||||| ||||| |||||||||||| |||||    
T  14710898 aatgtgagtatgagagagaaagttgtcac-aaaatgattgtacaaatatcatttatcttt 14710956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 613 - 644
Target Start/End: Original strand, 36874001 - 36874032
Alignment:
Q  613 agcaatgttatttgaacaaccctttattgtga 644  Q
    ||||||||||||||||||||||||||||||||    
T  36874001 agcaatgttatttgaacaaccctttattgtga 36874032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 784
Target Start/End: Complemental strand, 39211108 - 39211054
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttct 784  Q
    ||||||||||||||||||||| |||||  ||||||  |||||||||||||||||||    
T  39211108 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgttcaaatatcatttct 39211054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 730 - 783
Target Start/End: Complemental strand, 17823520 - 17823469
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttc 783  Q
    |||||||||||||||| |||||||||  ||||||  ||||||||||||||||||    
T  17823520 atgtgagtatgagagaaaaaattgtcataaaaat--ttgttcaaatatcatttc 17823469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 767
Target Start/End: Complemental strand, 28756602 - 28756564
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    ||||||||||||||||| ||||||||| |||||||||||    
T  28756602 aatgtgagtatgagagataaaattgtcacaaaaattatt 28756564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 30439510 - 30439567
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  30439510 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 30439567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 37392133 - 37392190
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| |||||  ||||||  |||| |||||||||||||||||    
T  37392133 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctctt 37392190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 766
Target Start/End: Complemental strand, 8645228 - 8645195
Alignment:
Q  733 tgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||||| ||||||||||    
T  8645228 tgagtatgagagagaaaattgtcccaaaaattat 8645195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 659
Target Start/End: Complemental strand, 11134769 - 11134720
Alignment:
Q  610 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 659  Q
    ||||||||||||||||||||||   ||| |||||| ||||||||||||||    
T  11134769 atgagcaatgttatttgaacaaatatttcttgtgataacttgttggacaa 11134720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 761
Target Start/End: Original strand, 34435736 - 34435773
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaa 761  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  34435736 agaacaatgtgtgtatgagagagaaaattgtcacaaaa 34435773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 790
Target Start/End: Original strand, 38939194 - 38939254
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttca 790  Q
    ||||||||||||||||||||| ||||  |||||||  ||||  |||||||||||||||||||    
T  38939194 aatgtgagtatgagagagaaagttgt-acaaaaatagttgtagaaatatcatttctctttca 38939254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Complemental strand, 41521035 - 41520998
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||||| |||||| ||||    
T  41521035 aatgtgagtatgagagagaaaattgttgcaaaagttat 41520998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 612 - 650
Target Start/End: Original strand, 26480977 - 26481015
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26480977 gagcaatgttatttgaacaaccctttattgtgacaactt 26481015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 399 - 445
Target Start/End: Complemental strand, 41265808 - 41265762
Alignment:
Q  399 aaattaatcttgtttcgtgtataaattaagacatttacattcacatt 445  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||||    
T  41265808 aaattaatcttgttccgtgtataaattaagacatatacattcacatt 41265762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 610 - 660
Target Start/End: Complemental strand, 44239222 - 44239172
Alignment:
Q  610 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  44239222 atgagcaatgttatttgaacaaccatttattgtgacaattttttggacaac 44239172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 611 - 660
Target Start/End: Original strand, 2427885 - 2427934
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  2427885 tgagcaatgttatttgaacaaccattttttgtgacaatttgttggacaac 2427934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 607 - 660
Target Start/End: Complemental strand, 11965982 - 11965929
Alignment:
Q  607 ccaatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||| |||||||||||||||||||||| |||  |||||||||||||||||||||    
T  11965982 ccaaagagcaatgttatttgaacaacctttttatgtgacaacttgttggacaac 11965929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 730 - 787
Target Start/End: Original strand, 42607536 - 42607592
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    |||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||    
T  42607536 atgtgagtatgagagagaaaattgtcac-aaaataattgtacaaatatcatttctctt 42607592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 6049349 - 6049408
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| || || |||||||  ||| |||||||||||||||||||    
T  6049349 aatgtgagtatgagagagaaagttatcacaaaaatggttgatcaaatatcatttctcttt 6049408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 10711791 - 10711733
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||||||||| | |||||   ||||||||||||||||||||||    
T  10711791 aatgtgagtatgagagagaaaattgtcac-aaaatagatgttcaaatatcatttctcttt 10711733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 660
Target Start/End: Original strand, 37731086 - 37731135
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||||||| |||  ||||||||||||||| |||||    
T  37731086 tgagcaatgttatttgaacaacctttttatgtgacaacttgttgcacaac 37731135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 729 - 785
Target Start/End: Original strand, 37737982 - 37738036
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||||||||||||||| ||||||  |||||  ||||||||||||||||||||    
T  37737982 aatgtgagtatgagagagaaagttgtcg--aaaatggttgttcaaatatcatttctc 37738036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 616 - 660
Target Start/End: Complemental strand, 14877169 - 14877125
Alignment:
Q  616 aatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||| ||| ||||||||||||||| ||||||    
T  14877169 aatgttatttgaacaaccatttcttgtgacaacttgttagacaac 14877125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 31578618 - 31578570
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||| ||||||||||| | ||| ||||||||||||||||||||||    
T  31578618 gagcaatgatatttgaacaatcatttcttgtgacaacttgttggacaac 31578570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 37316702 - 37316750
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  | |||||||||||||||||||    
T  37316702 gagcaatgttatttgaacaacctttttctatgacaacttgttggacaac 37316750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 732 - 784
Target Start/End: Complemental strand, 13266029 - 13265975
Alignment:
Q  732 gtgagtatgagagagaaaattgtcgcaaaaat--tattgttcaaatatcatttct 784  Q
    ||||||||||||||||||||||| ||||||||  | |||| ||||||||||||||    
T  13266029 gtgagtatgagagagaaaattgttgcaaaaattgtgttgtacaaatatcatttct 13265975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 758 - 789
Target Start/End: Original strand, 17569749 - 17569780
Alignment:
Q  758 aaaaattattgttcaaatatcatttctctttc 789  Q
    ||||||||||||||||||||||||||||||||    
T  17569749 aaaaattattgttcaaatatcatttctctttc 17569780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 724 - 767
Target Start/End: Complemental strand, 19916727 - 19916684
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    ||||||||||| |||||||||||||| ||||| |||||||||||    
T  19916727 agaacaatgtgtgtatgagagagaaagttgtcacaaaaattatt 19916684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 724 - 763
Target Start/End: Complemental strand, 37003682 - 37003643
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaaat 763  Q
    |||||||||||||||||||||||||| ||||| |||||||    
T  37003682 agaacaatgtgagtatgagagagaaagttgtcacaaaaat 37003643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 730 - 788
Target Start/End: Complemental strand, 6646889 - 6646832
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    |||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  6646889 atgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 6646832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 767
Target Start/End: Original strand, 21738620 - 21738658
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    |||||||||||||||||||||||| || |||||||||||    
T  21738620 aatgtgagtatgagagagaaaattatcacaaaaattatt 21738658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 767
Target Start/End: Original strand, 40210072 - 40210110
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  40210072 aatgtgagtatgagagagaaagttgtcacaaaaattatt 40210110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Original strand, 22296134 - 22296190
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||| ||||||||||||||  |||||||  |||| ||||||||||||||||    
T  22296134 aatgtgagtatcagagagaaaattgt-acaaaaatggttgtacaaatatcatttctct 22296190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Original strand, 22353180 - 22353236
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||||||| ||||| ||||| | ||||| ||||| ||||||||||||||||    
T  22353180 aatgtgagtatgagaaagaaagttgtcac-aaaatgattgtacaaatatcatttctct 22353236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 724 - 761
Target Start/End: Original strand, 37731199 - 37731236
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaa 761  Q
    ||||||||||| |||||||||||||||||||| |||||    
T  37731199 agaacaatgtgtgtatgagagagaaaattgtcacaaaa 37731236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.000000000001; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 612 - 650
Target Start/End: Complemental strand, 4213256 - 4213218
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4213256 gagcaatgttatttgaacaaccctttattgtgacaactt 4213218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 616 - 660
Target Start/End: Original strand, 7918953 - 7918997
Alignment:
Q  616 aatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||    
T  7918953 aatgttatttgaacaaccctttcttgtgacaacttgttagacaac 7918997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 729 - 785
Target Start/End: Original strand, 47398456 - 47398511
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    |||||||||||||||||||||||||||  |||||| | |||||||||||||||||||    
T  47398456 aatgtgagtatgagagagaaaattgtc-aaaaaatgaatgttcaaatatcatttctc 47398511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 47642494 - 47642542
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||||||||    
T  47642494 gagcaatgttatttgaacaaccattttttgggacaacttgttggacaac 47642542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 48983555 - 48983603
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  48983555 gagcaatgttattggtacaaccatttattgtgacaacttgttggacaac 48983603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 609 - 660
Target Start/End: Original strand, 38878785 - 38878836
Alignment:
Q  609 aatgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||||||||  |||  |||||||||||||||||||||    
T  38878785 aatgagcaatgttatttgaacaacatttttatgtgacaacttgttggacaac 38878836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 730 - 788
Target Start/End: Complemental strand, 50797845 - 50797788
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    |||||||||||||||||||| ||||| | ||||| ||||| ||||||||||||||||||    
T  50797845 atgtgagtatgagagagaaagttgtcac-aaaatgattgtacaaatatcatttctcttt 50797788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 730 - 766
Target Start/End: Complemental strand, 8846039 - 8846003
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||||| ||||||||||    
T  8846039 atgtgagtatgagagagaaaattgtcacaaaaattat 8846003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 785
Target Start/End: Complemental strand, 18336213 - 18336158
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||||||||||||||| ||||| | ||||| | |||||||||||||||||||    
T  18336213 aatgtgagtatgagagagaaagttgtcac-aaaatgaatgttcaaatatcatttctc 18336158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 27742793 - 27742745
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||||||    
T  27742793 gagcaatgttatttgaacaacctttttatgtaacaacttgttggacaac 27742745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 40439727 - 40439775
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  |||||||| ||||||||||||    
T  40439727 gagcaatgttatttgaacaacctttttatgtgacaatttgttggacaac 40439775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 42468776 - 42468728
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||| ||||||||||||| ||| ||||||||| ||||||||||||    
T  42468776 gagcaatgatatttgaacaaccatttcttgtgacaatttgttggacaac 42468728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 785
Target Start/End: Original strand, 51718631 - 51718687
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||||||||||||||||||| ||||   ||||||  ||||||||||||||||||||    
T  51718631 aatgtgagtatgagagagaaagttgtgaaaaaaatggttgttcaaatatcatttctc 51718687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 8200142 - 8200084
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||||    
T  8200142 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctcttt 8200084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Complemental strand, 11121547 - 11121489
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||  ||||| || |||| ||||||||||||||||||    
T  11121547 aatgtgagtatgagagagaaagttgt-acaaaagttgttgtacaaatatcatttctcttt 11121489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 38303692 - 38303751
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    |||| |||||||||||||||| |||| | |||| ||  ||||||||||||||||||||||    
T  38303692 aatgcgagtatgagagagaaagttgttgtaaaagttgatgttcaaatatcatttctcttt 38303751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 40596059 - 40596117
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||||||||| ||||| | |||||  |||| ||||||||||||||||||    
T  40596059 aatgtgagtatgagagagaaagttgtcac-aaaatggttgtacaaatatcatttctcttt 40596117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 788
Target Start/End: Original strand, 48325783 - 48325841
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    ||||||||||||||| ||||||||||| | |||||  |||| ||||||||||||||||||    
T  48325783 aatgtgagtatgagatagaaaattgtcac-aaaatggttgtacaaatatcatttctcttt 48325841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 730 - 788
Target Start/End: Original strand, 611641 - 611698
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctcttt 788  Q
    |||||| | |||||||||||||| || ||||| | ||||||||||||||||||||||||    
T  611641 atgtgaatttgagagagaaaattatcccaaaa-tgattgttcaaatatcatttctcttt 611698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 724 - 766
Target Start/End: Complemental strand, 4213144 - 4213102
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||||| ||||| ||||| ||||    
T  4213144 agaacaatgtgagtatgagagagaaagttgtcacaaaagttat 4213102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 724 - 786
Target Start/End: Complemental strand, 4857982 - 4857921
Alignment:
Q  724 agaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||| | |||||||||||| |||||  |||| | ||||||||||||||||||||||    
T  4857982 agaacaatgtgtgcatgagagagaaagttgtca-aaaagtgattgttcaaatatcatttctct 4857921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 33358163 - 33358220
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| ||||| | |||||   |||||||||||||||||||||    
T  33358163 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctctt 33358220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 723 - 785
Target Start/End: Complemental strand, 37690490 - 37690429
Alignment:
Q  723 gagaacaatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctc 785  Q
    ||||| |||||||||||||||||||||||||||   ||| | ||||| |||||||||||||||    
T  37690490 gagaataatgtgagtatgagagagaaaattgtc-ataaagtgattgtacaaatatcatttctc 37690429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 733 - 790
Target Start/End: Original strand, 48103398 - 48103453
Alignment:
Q  733 tgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctttca 790  Q
    ||||||||||||||||| ||||| |||| | |  ||||||||||||||||||||||||    
T  48103398 tgagtatgagagagaaagttgtcacaaatagt--tgttcaaatatcatttctctttca 48103453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 767
Target Start/End: Complemental strand, 52437561 - 52437523
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  52437561 aatgtgagtatgagagagaaagttgtcacaaaaattatt 52437523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 5771752 - 5771789
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  5771752 aatgtgagtatgagagagaaagttgtcacaaaaattat 5771789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 766
Target Start/End: Original strand, 40328745 - 40328782
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    |||||||||||||||||||||||| || ||||||||||    
T  40328745 aatgtgagtatgagagagaaaattatcacaaaaattat 40328782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 730 - 767
Target Start/End: Complemental strand, 46281502 - 46281465
Alignment:
Q  730 atgtgagtatgagagagaaaattgtcgcaaaaattatt 767  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  46281502 atgtgagtatgagagagaaagttgtcacaaaaattatt 46281465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 729 - 786
Target Start/End: Original strand, 48220148 - 48220204
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctct 786  Q
    ||||||||||||||||||||| ||||| | |||||   ||||||||||||||||||||    
T  48220148 aatgtgagtatgagagagaaagttgtcac-aaaatggatgttcaaatatcatttctct 48220204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 611 - 660
Target Start/End: Complemental strand, 48859008 - 48858959
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||| ||||||||| ||| |||||||||| | |||||||||    
T  48859008 tgagcaatgttatatgaacaaccatttcttgtgacaaccttttggacaac 48858959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 733 - 766
Target Start/End: Complemental strand, 50824804 - 50824771
Alignment:
Q  733 tgagtatgagagagaaaattgtcgcaaaaattat 766  Q
    ||||||||||||||||||||||| ||||||||||    
T  50824804 tgagtatgagagagaaaattgtcacaaaaattat 50824771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 650
Target Start/End: Complemental strand, 17182284 - 17182244
Alignment:
Q  610 atgagcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  17182284 atgagcaatgttatttgaacaaccctttattatgacaactt 17182244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 399 - 450
Target Start/End: Complemental strand, 34261026 - 34260975
Alignment:
Q  399 aaattaatcttgtttcgtgtataaattaagacatttacattcacattccata 450  Q
    |||||||||||||  ||||||||||||||||||| |||||||||||| ||||    
T  34261026 aaattaatcttgtcccgtgtataaattaagacatatacattcacatttcata 34260975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 650
Target Start/End: Complemental strand, 1287097 - 1287059
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaactt 650  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  1287097 gagcaatgttatttgaacaatcctttattgtgacaactt 1287059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 33712504 - 33712456
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||||||    
T  33712504 gagcaatgttatttgaacaacctttttatgtaacaacttgttggacaac 33712456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 729 - 764
Target Start/End: Original strand, 5570338 - 5570373
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaatt 764  Q
    ||||||||||||||||||||||||||| ||||||||    
T  5570338 aatgtgagtatgagagagaaaattgtcacaaaaatt 5570373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 612 - 659
Target Start/End: Original strand, 5739651 - 5739698
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaa 659  Q
    ||||||||||||||||||| || ||| || ||||||||||||||||||    
T  5739651 gagcaatgttatttgaacatccatttcttatgacaacttgttggacaa 5739698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 610 - 660
Target Start/End: Complemental strand, 8645494 - 8645444
Alignment:
Q  610 atgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||| ||||||||||||| ||| |||||||||| | |||||||||    
T  8645494 atgagcaatgatatttgaacaaccatttcttgtgacaaccttttggacaac 8645444  T

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Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 727 - 761
Target Start/End: Original strand, 34442065 - 34442099
Alignment:
Q  727 acaatgtgagtatgagagagaaaattgtcgcaaaa 761  Q
    ||||||||||||||||||||||||||||| |||||    
T  34442065 acaatgtgagtatgagagagaaaattgtcacaaaa 34442099  T

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Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 615 - 660
Target Start/End: Original strand, 18064980 - 18065025
Alignment:
Q  615 caatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||  |||  |||||||||||||||||||||    
T  18064980 caatgttatttgaacaacttttttatgtgacaacttgttggacaac 18065025  T

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Target: scaffold0204 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 729 - 785
Target Start/End: Complemental strand, 23143 - 23086
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattat-tgttcaaatatcatttctc 785  Q
    ||||||| |||||||||||||||||| ||||||||| | ||||| |||||||||||||    
T  23143 aatgtgaatatgagagagaaaattgttgcaaaaattgtatgttcgaatatcatttctc 23086  T

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Target: scaffold0201 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 611 - 660
Target Start/End: Complemental strand, 8657 - 8608
Alignment:
Q  611 tgagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    ||||||||||||||||||||||  ||| ||||||||||||||| ||||||    
T  8657 tgagcaatgttatttgaacaactatttcttgtgacaacttgttagacaac 8608  T

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Target: scaffold0618 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 8840 - 8888
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||||||||||| |||  ||||||||||| |||||||||    
T  8840 gagcaatgttatttgaacaaccttttcatgtgacaactttttggacaac 8888  T

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Target: scaffold0276 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 729 - 787
Target Start/End: Complemental strand, 1711 - 1656
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    |||| |||||||||||||||||||||| |||||    ||||||||||||||||||||||    
T  1711 aatgagagtatgagagagaaaattgtcacaaaa---gttgttcaaatatcatttctctt 1656  T

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Target: scaffold0184 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Original strand, 13444 - 13492
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||| |||||| |||| |||||||||||| |||||||||    
T  13444 gagcaatgttatttaaacaactcttttttgtgacaacttattggacaac 13492  T

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Target: scaffold0078 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 612 - 660
Target Start/End: Complemental strand, 59400 - 59352
Alignment:
Q  612 gagcaatgttatttgaacaaccctttattgtgacaacttgttggacaac 660  Q
    |||||||||||||| |||||| |||| |||||||||||| |||||||||    
T  59400 gagcaatgttatttaaacaactcttttttgtgacaacttattggacaac 59352  T

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Target: scaffold0034 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 614 - 654
Target Start/End: Original strand, 101790 - 101830
Alignment:
Q  614 gcaatgttatttgaacaaccctttattgtgacaacttgttg 654  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  101790 gcaatgttatttgcacaaccctttcttgtgacaacttgttg 101830  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 729 - 787
Target Start/End: Original strand, 31605 - 31662
Alignment:
Q  729 aatgtgagtatgagagagaaaattgtcgcaaaaattattgttcaaatatcatttctctt 787  Q
    ||||||||||||||||||||| |||||  ||||||  |||| |||||||||||||||||    
T  31605 aatgtgagtatgagagagaaagttgtc-aaaaaatggttgtacaaatatcatttctctt 31662  T

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