View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11165_high_4 (Length: 289)
Name: NF11165_high_4
Description: NF11165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11165_high_4 |
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Alignment Details
Target: chr1 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 272
Target Start/End: Original strand, 37325751 - 37326024
Alignment:
| Q |
1 |
acctctacttcttgttattctaattatgaaccttctcctccgcgaaatcgtgtagggatcgtaagcaatccgtttccccaatcgttgtggtggaatgata |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37325751 |
acctctacttcttgttattctaattatgaaccttctcctccgcgaaatcgtgtagggatcgtaagcaatccgtttccccaatcgttgtggtggaatgata |
37325850 |
T |
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| Q |
101 |
aggattcgaagagaaaacgtagagtggccacatacaagctttatgcagctcaaggtaagctcaagtcttccctccaaaaaggatttcaccgtttcaaaat |
200 |
Q |
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|||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
37325851 |
aggattcgaagagaaaacgtagggtggccacatacaggctttatgcagctcaaggtaagctcaagtcttccctccaaaaaggatatcaccgtttcaaaat |
37325950 |
T |
|
| Q |
201 |
cgcatgcaagaagatcgtcacctagcttaatgtgtgggatg--taatgtgtccattttatcttgcacataatat |
272 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
37325951 |
cgcatgcaagaagatcgtcacctagcttaatgtgtgggatgtataatgtgtccattttatcttgcacataatat |
37326024 |
T |
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