View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11165_low_5 (Length: 255)
Name: NF11165_low_5
Description: NF11165
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11165_low_5 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 222; Significance: 1e-122; HSPs: 15)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 37532108 - 37532349
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37532108 |
taagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactt |
37532207 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37532208 |
aaagattgtggaatgctacctgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
37532307 |
T |
|
| Q |
201 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatct |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37532308 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatct |
37532349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 37638754 - 37638995
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37638754 |
taagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
37638853 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
200 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37638854 |
aaagattgtggaatgctacctatgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
37638953 |
T |
|
| Q |
201 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatct |
242 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37638954 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatct |
37638995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37402150 - 37401910
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37402150 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
37402051 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37402050 |
aaagattgtggaatgctacctgtgattccattatttgaaagattaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
37401951 |
T |
|
| Q |
201 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37401950 |
tgttatttgataaatcaatagttgtgaaagcagtcaatatc |
37401910 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 37593212 - 37593452
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593212 |
taagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
37593311 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37593312 |
aaagattgtggaatgctacctgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
37593411 |
T |
|
| Q |
201 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37593412 |
tgttatttgataaatcaatagttgtgaaagcagtcaatatc |
37593452 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 37710515 - 37710755
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37710515 |
taagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
37710614 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37710615 |
aaagattgtggaatgctacttgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
37710714 |
T |
|
| Q |
201 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37710715 |
tgttatttgataaatcaatagttgtgaaagcagtcaatatc |
37710755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 37822912 - 37823152
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37822912 |
taagactgagaggaagttcaaatttgtcaaagccacaggaatctcacccttcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
37823011 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37823012 |
aaagattgtggaatgctacctgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
37823111 |
T |
|
| Q |
201 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37823112 |
tgttatttgataaatcaatagttgtgaaagcagtcaatatc |
37823152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 37695603 - 37695843
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
37695603 |
taagactgagaggaagttcaaatttgtcaaagccacaggaatctctcccgtcaattggttacatgagaggtccaaccactccaattttctcaaatgaccc |
37695702 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
200 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37695703 |
aaagattgtggaatactacctgtgattccattgtttgaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
37695802 |
T |
|
| Q |
201 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
37695803 |
tgttatttgataaatcaatagttgtgaaagcagtcaatatc |
37695843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 2 - 241
Target Start/End: Original strand, 37701695 - 37701934
Alignment:
| Q |
2 |
aagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactca |
101 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||| | ||||||||||||||||| |||| | |||||||||||||||||||| ||||| | || ||||| |
|
|
| T |
37701695 |
aagaatgagaggaaattcaaatttgtcaaagccgcgggaatctcacccgtcaaacggttcctggagaggtccaaccactccaagtttcttagattactca |
37701794 |
T |
|
| Q |
102 |
aagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaacat |
201 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
37701795 |
aagattgtggaatgctacctgtgattccattgtttgaaaggttaagtcctttaagagaatataattctccaatgacttgtggaattctaccttcaaacat |
37701894 |
T |
|
| Q |
202 |
gttatttgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
37701895 |
gttatttgataaatcaatagttgtgaaagtcgtcaatatc |
37701934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 37394038 - 37393798
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||| | |||||||||||| |||||||||| | |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
37394038 |
taagaatgagaggaaattcaaatttgtcaaagccacgggaatctcacccttcaattggttccttgagaggtccaaccactctaaatttctcaaatgactt |
37393939 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaaca |
200 |
Q |
| |
|
||||||||||||||| | | |||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| || |||||| || |||||| |
|
|
| T |
37393938 |
aaagattgtggaatggttcctgtgattccattgtttgagaggttaaggcctttgagagaatttaattctccaatgacttctgaaatttctccatcaaact |
37393839 |
T |
|
| Q |
201 |
tgttatttgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
37393838 |
tgttatttgataaatcaatagttgtaaaagtagtcaatatc |
37393798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 37434719 - 37434959
Alignment:
| Q |
2 |
aagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactca |
101 |
Q |
| |
|
|||| ||| ||||| |||||||||||||||||| ||||||| ||||||||||| ||||| ||||||||| ||||||||||||| |||||| | ||||| |
|
|
| T |
37434719 |
aagaatgataggaaattcaaatttgtcaaagccacaggaatttcacccgtcaactggttttttgagaggtctaaccactccaaatgtctcaatttactca |
37434818 |
T |
|
| Q |
102 |
aagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaacat |
201 |
Q |
| |
|
|||||||||||||| ||| |||||||| ||||||| |||||||||| |||||||||||||||||||||||||||||| | ||||||| |||||||||| |
|
|
| T |
37434819 |
aagattgtggaatggtacctgtgattctattgtttgaaaggttaagacctttgagagaatttaattctccaatgactagaggaatttttccttcaaacaa |
37434918 |
T |
|
| Q |
202 |
gttatttgataaatcaatagttgtgaaagtagtcaatatct |
242 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37434919 |
gttatttgataaatcaatagttgtgaaagtagtcaatatct |
37434959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 8 - 242
Target Start/End: Complemental strand, 37383471 - 37383237
Alignment:
| Q |
8 |
gagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactcaaagatt |
107 |
Q |
| |
|
||||| || |||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| |||||||| | |||||||||| ||||||||| | |
|
|
| T |
37383471 |
gagagaaaattcaaatttgtcaaagccaaaggaatctcacccttcaattggttccttgagaggtctaaccactctagatttctcaaactactcaaagaat |
37383372 |
T |
|
| Q |
108 |
gtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaacatgttatt |
207 |
Q |
| |
|
||||| ||| ||||||| ||||||| |||||||||| |||||||||||| | |||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
37383371 |
aaggaattgtacctgtgattttattgtttgaaaggttaaggcctttgagagaaatcaattctccaaagacttgtggaatttctccttcaaacatgttatt |
37383272 |
T |
|
| Q |
208 |
tgataaatcaatagttgtgaaagtagtcaatatct |
242 |
Q |
| |
|
||||||||||||||||||||| || |||||||||| |
|
|
| T |
37383271 |
tgataaatcaatagttgtgaacgtggtcaatatct |
37383237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 64 - 241
Target Start/End: Original strand, 37428126 - 37428300
Alignment:
| Q |
64 |
tgagaggtccaaccactccaaatttctcaaatgactcaaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaattt |
163 |
Q |
| |
|
||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||||||||| ||| |||| |||||||||||||| |
|
|
| T |
37428126 |
tgagaggtccaaccactccaagtttctcagattactcaaagattgtggaatgctacctgtgattccattgtttgaaa---taagacctttgagagaattc |
37428222 |
T |
|
| Q |
164 |
aattctccaatgacttgtggaatttcaccttcaaacatgttatttgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
|||||||||| |||||| |||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||||| |
|
|
| T |
37428223 |
aattctccaacgacttgaggaatttctccttcaaacatgttatttgacaaatcaatagttgtgaaagttgtcaatatc |
37428300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 37440078 - 37440238
Alignment:
| Q |
1 |
taagactgagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactc |
100 |
Q |
| |
|
|||||| |||||||| |||||||||||||||| | | ||||| ||||| ||||||||||| | |||||||||| ||||||| ||||||||||| | |||| |
|
|
| T |
37440078 |
taagacagagaggaaattcaaatttgtcaaagtcacgggaatttcaccggtcaattggtttcttgagaggtccgaccactctaaatttctcaatttactc |
37440177 |
T |
|
| Q |
101 |
aaagattgtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaat |
161 |
Q |
| |
|
||||||||||||||| ||| | |||||||||| ||| | |||||||| ||||| ||||||| |
|
|
| T |
37440178 |
aaagattgtggaatggtacttttgattccattttttaagaggttaaggcctttaagagaat |
37440238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 26437465 - 26437564
Alignment:
| Q |
138 |
aaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaacatgttatttgataaatcaatagttgtgaaagtagtcaa |
237 |
Q |
| |
|
|||| ||||||||| |||| || || || |||||||||| | |||||| || |||||||| | || ||||||||||||| |||||||||||||||||| |
|
|
| T |
26437465 |
aaagattaagtcctatgagtgacttcaactctccaatgattattggaatctctccttcaaatttattctttgataaatcaagagttgtgaaagtagtcaa |
26437564 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 237
Target Start/End: Original strand, 26450834 - 26450933
Alignment:
| Q |
138 |
aaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaacatgttatttgataaatcaatagttgtgaaagtagtcaa |
237 |
Q |
| |
|
|||||||||||||| |||| || || || |||||||||| |||||| || |||||||| | || ||||||||||||| |||||||||||||||||| |
|
|
| T |
26450834 |
aaaggttaagtcctatgagtgacttcaactctccaatgatcgttggaatctctccttcaaatttattgtttgataaatcaagagttgtgaaagtagtcaa |
26450933 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 16844138 - 16843908
Alignment:
| Q |
11 |
aggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactcaaagattgtg |
110 |
Q |
| |
|
||||| |||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16844138 |
aggaaattcaaatttgccaaagcctcaagaatctctcccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactcaaagattgtg |
16844039 |
T |
|
| Q |
111 |
gaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaacatgttatttga |
210 |
Q |
| |
|
||||||||| ||||||||||| ||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16844038 |
gaatgctacccgtgattccattttttgaaaggttaagtccaatgagagaatataactctccaatgacttgtggaatttcaccttcaaacatgttatttga |
16843939 |
T |
|
| Q |
211 |
taaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
16843938 |
taaatcaatagttgtgaaagtagtcaatatc |
16843908 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 11 - 241
Target Start/End: Complemental strand, 16846805 - 16846575
Alignment:
| Q |
11 |
aggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactcaaagattgtg |
110 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||| ||||||| |||||| | ||||||||||||||||||||||| |||||| | |||||||||||||| |
|
|
| T |
16846805 |
aggaaattcaaatttgtcaaagccacaggaatctctcccgtcatttggttccttgagaggtccaaccactccaaatgtctcaatttactcaaagattgtg |
16846706 |
T |
|
| Q |
111 |
gaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaacatgttatttga |
210 |
Q |
| |
|
||||| ||| |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||| |
|
|
| T |
16846705 |
gaatggtacctgtgattctattgtttgaaaggttaagacctttgagagaatttaattctccaatgacctctggaatttttccttcaaacatgttatttga |
16846606 |
T |
|
| Q |
211 |
taaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |
|
|
| T |
16846605 |
taaatcaatagttgtgaaaatagtcaatatc |
16846575 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 8 - 241
Target Start/End: Complemental strand, 24218876 - 24218643
Alignment:
| Q |
8 |
gagaggaagttcaaatttgtcaaagcctcaggaatctcacccgtcaattggttgcatgagaggtccaaccactccaaatttctcaaatgactcaaagatt |
107 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||| ||| |||| | ||| | |||||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
24218876 |
gagaggaaattcaaatttgtcaaagccataggaatcttaccactcaagttgtttcttgagaggtccaaccactccaaatttcgcaaattactcaaagatt |
24218777 |
T |
|
| Q |
108 |
gtggaatgctacatgtgattccattgttttaaaggttaagtcctttgagagaatttaattctccaatgacttgtggaatttcaccttcaaacatgttatt |
207 |
Q |
| |
|
|||||||| ||| | ||||| ||||| | |||||||||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
24218776 |
gtggaatggtacctatgatttgattgtgtgaaaggttaaggcctttgagaaaatttaatttcccaatgacttgtggaatttctccttcaaacatgttatt |
24218677 |
T |
|
| Q |
208 |
tgataaatcaatagttgtgaaagtagtcaatatc |
241 |
Q |
| |
|
||||||||||| |||||||||||||||| |||| |
|
|
| T |
24218676 |
cgataaatcaatcgttgtgaaagtagtcagtatc |
24218643 |
T |
|
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