View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11166_low_4 (Length: 637)

Name: NF11166_low_4
Description: NF11166
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11166_low_4
NF11166_low_4
[»] chr4 (39 HSPs)
chr4 (45-326)||(13095387-13095666)
chr4 (112-326)||(17381783-17381997)
chr4 (330-477)||(33536785-33536932)
chr4 (330-477)||(33537062-33537209)
chr4 (249-326)||(19877753-19877831)
chr4 (249-327)||(23138035-23138113)
chr4 (249-326)||(56235149-56235227)
chr4 (241-328)||(13880449-13880537)
chr4 (255-326)||(14965337-14965409)
chr4 (249-327)||(10125684-10125763)
chr4 (249-327)||(22100914-22100993)
chr4 (240-326)||(23621638-23621725)
chr4 (249-327)||(37175373-37175452)
chr4 (241-327)||(56038611-56038698)
chr4 (249-327)||(56513658-56513737)
chr4 (249-326)||(27851167-27851245)
chr4 (249-326)||(28002514-28002592)
chr4 (241-326)||(45250070-45250156)
chr4 (249-326)||(52183855-52183933)
chr4 (249-326)||(44570794-44570871)
chr4 (239-326)||(288344-288432)
chr4 (255-326)||(1788803-1788875)
chr4 (249-330)||(22320524-22320607)
chr4 (241-326)||(29832261-29832348)
chr4 (249-326)||(53334060-53334139)
chr4 (241-327)||(22019089-22019176)
chr4 (241-327)||(23236997-23237086)
chr4 (249-326)||(4294132-4294210)
chr4 (249-326)||(22842905-22842983)
chr4 (241-326)||(29494958-29495044)
chr4 (241-326)||(30088793-30088879)
chr4 (241-326)||(34447632-34447718)
chr4 (249-326)||(34735919-34735997)
chr4 (241-326)||(47869236-47869322)
chr4 (241-326)||(49235954-49236040)
chr4 (241-293)||(13397981-13398034)
chr4 (249-326)||(30649790-30649867)
chr4 (249-327)||(38852840-38852920)
chr4 (273-328)||(23222469-23222525)
[»] chr5 (42 HSPs)
chr5 (95-327)||(19599348-19599582)
chr5 (201-326)||(13952147-13952273)
chr5 (249-326)||(29665314-29665392)
chr5 (249-326)||(21195240-21195317)
chr5 (42-133)||(13952002-13952094)
chr5 (249-327)||(18026103-18026182)
chr5 (249-326)||(4431512-4431590)
chr5 (249-326)||(22510400-22510478)
chr5 (249-327)||(33858-33937)
chr5 (241-327)||(35189176-35189263)
chr5 (249-331)||(38394330-38394413)
chr5 (241-326)||(29619413-29619499)
chr5 (249-326)||(4744705-4744782)
chr5 (249-326)||(39932811-39932888)
chr5 (241-327)||(27187408-27187495)
chr5 (249-326)||(5070779-5070857)
chr5 (241-326)||(5378161-5378247)
chr5 (241-326)||(10370547-10370633)
chr5 (265-326)||(32706731-32706793)
chr5 (249-326)||(40555069-40555147)
chr5 (241-329)||(9461355-9461444)
chr5 (249-326)||(11312946-11313023)
chr5 (249-326)||(15268477-15268554)
chr5 (249-326)||(8035742-8035821)
chr5 (293-329)||(18652455-18652491)
chr5 (241-326)||(25538039-25538126)
chr5 (241-328)||(36302454-36302542)
chr5 (249-329)||(5288842-5288924)
chr5 (249-326)||(7458576-7458654)
chr5 (241-326)||(8542760-8542846)
chr5 (249-326)||(9641019-9641097)
chr5 (241-330)||(11130147-11130237)
chr5 (241-326)||(12360787-12360873)
chr5 (249-326)||(19712482-19712560)
chr5 (249-326)||(24781168-24781246)
chr5 (249-326)||(34900204-34900284)
chr5 (251-288)||(1887324-1887361)
chr5 (249-329)||(19282645-19282726)
chr5 (249-329)||(35584917-35584998)
chr5 (249-324)||(2914425-2914501)
chr5 (293-329)||(32706982-32707018)
chr5 (255-326)||(33629939-33630011)
[»] chr1 (35 HSPs)
chr1 (106-326)||(38201844-38202064)
chr1 (19-327)||(4756407-4756710)
chr1 (249-326)||(31023793-31023870)
chr1 (241-325)||(5653683-5653768)
chr1 (249-326)||(23825205-23825282)
chr1 (249-326)||(28121255-28121332)
chr1 (249-326)||(39673701-39673780)
chr1 (241-326)||(6920925-6921011)
chr1 (249-326)||(13352451-13352529)
chr1 (249-327)||(31500730-31500808)
chr1 (249-326)||(33488105-33488183)
chr1 (241-326)||(38238866-38238952)
chr1 (249-326)||(51417570-51417648)
chr1 (241-328)||(30679271-30679359)
chr1 (249-326)||(39655352-39655431)
chr1 (241-328)||(50324825-50324913)
chr1 (249-327)||(4226238-4226317)
chr1 (241-323)||(34347274-34347357)
chr1 (249-327)||(51905800-51905879)
chr1 (261-326)||(2733841-2733907)
chr1 (249-326)||(6540667-6540745)
chr1 (241-326)||(18127334-18127420)
chr1 (241-326)||(31045538-31045624)
chr1 (241-326)||(32145353-32145439)
chr1 (249-326)||(35369597-35369675)
chr1 (249-326)||(42219790-42219868)
chr1 (249-326)||(83110-83187)
chr1 (249-294)||(26061865-26061910)
chr1 (249-294)||(52001212-52001257)
chr1 (293-326)||(52667061-52667094)
chr1 (249-326)||(7572508-7572587)
chr1 (249-326)||(9264988-9265067)
chr1 (249-326)||(15170268-15170347)
chr1 (249-326)||(16051851-16051930)
chr1 (249-326)||(35379717-35379796)
[»] chr7 (39 HSPs)
chr7 (95-319)||(21945274-21945498)
chr7 (249-326)||(31466048-31466126)
chr7 (249-326)||(36669731-36669809)
chr7 (241-327)||(36916665-36916752)
chr7 (255-326)||(48339447-48339518)
chr7 (241-326)||(13439317-13439403)
chr7 (241-326)||(28536956-28537042)
chr7 (249-326)||(31502808-31502886)
chr7 (241-326)||(44894769-44894855)
chr7 (241-327)||(47578875-47578961)
chr7 (249-326)||(22369503-22369582)
chr7 (241-327)||(6882839-6882926)
chr7 (240-326)||(10453102-10453189)
chr7 (241-326)||(4513555-4513641)
chr7 (241-326)||(8611813-8611899)
chr7 (241-326)||(11910627-11910713)
chr7 (241-326)||(23059070-23059156)
chr7 (249-326)||(28703543-28703621)
chr7 (249-326)||(29410289-29410367)
chr7 (241-326)||(29985965-29986051)
chr7 (249-325)||(30264427-30264505)
chr7 (249-322)||(30803288-30803362)
chr7 (250-316)||(32466362-32466428)
chr7 (241-326)||(35144282-35144368)
chr7 (249-326)||(40536984-40537062)
chr7 (241-326)||(44480986-44481072)
chr7 (241-326)||(46373198-46373284)
chr7 (241-326)||(47834347-47834433)
chr7 (241-323)||(10316551-10316635)
chr7 (249-326)||(17611508-17611585)
chr7 (249-326)||(23709560-23709637)
chr7 (249-326)||(22326729-22326808)
chr7 (292-332)||(22918412-22918452)
chr7 (293-329)||(23726370-23726406)
chr7 (255-326)||(27059748-27059820)
chr7 (251-299)||(30643239-30643286)
chr7 (255-326)||(32467807-32467879)
chr7 (293-329)||(38074752-38074788)
chr7 (293-329)||(43884120-43884156)
[»] chr3 (43 HSPs)
chr3 (19-326)||(53536681-53536983)
chr3 (112-275)||(53533245-53533408)
chr3 (241-326)||(40710708-40710794)
chr3 (249-326)||(8724279-8724357)
chr3 (249-326)||(9076166-9076244)
chr3 (241-326)||(41751101-41751187)
chr3 (249-327)||(32078017-32078097)
chr3 (249-327)||(39259257-39259336)
chr3 (240-326)||(43599570-43599657)
chr3 (240-326)||(45824080-45824167)
chr3 (249-326)||(22926036-22926114)
chr3 (241-326)||(23609429-23609515)
chr3 (241-326)||(25904104-25904190)
chr3 (241-326)||(34663430-34663516)
chr3 (241-326)||(35084533-35084619)
chr3 (241-326)||(38783637-38783723)
chr3 (249-326)||(43185344-43185422)
chr3 (241-326)||(52040445-52040531)
chr3 (249-326)||(52870641-52870719)
chr3 (249-326)||(9794474-9794550)
chr3 (249-293)||(3348986-3349030)
chr3 (241-327)||(24089327-24089414)
chr3 (241-326)||(3645901-3645987)
chr3 (241-326)||(19961021-19961107)
chr3 (249-326)||(29651993-29652071)
chr3 (241-326)||(30190323-30190409)
chr3 (249-326)||(34817108-34817186)
chr3 (249-326)||(39290536-39290614)
chr3 (240-326)||(41979876-41979962)
chr3 (249-326)||(45347203-45347283)
chr3 (249-326)||(47109266-47109344)
chr3 (249-326)||(47498108-47498186)
chr3 (241-326)||(48333710-48333796)
chr3 (241-326)||(52060467-52060553)
chr3 (241-326)||(54747903-54747989)
chr3 (249-323)||(38808089-38808165)
chr3 (250-326)||(41265511-41265588)
chr3 (249-321)||(49102436-49102511)
chr3 (254-326)||(51380233-51380306)
chr3 (293-329)||(43185595-43185631)
chr3 (249-326)||(43600867-43600946)
chr3 (249-326)||(51571751-51571830)
chr3 (275-326)||(53533634-53533686)
[»] chr8 (45 HSPs)
chr8 (170-326)||(42919021-42919178)
chr8 (19-110)||(42918900-42918986)
chr8 (249-326)||(15225840-15225917)
chr8 (249-327)||(12988185-12988265)
chr8 (249-326)||(31692734-31692811)
chr8 (241-326)||(45439513-45439598)
chr8 (249-330)||(2099167-2099249)
chr8 (241-329)||(7427365-7427454)
chr8 (250-319)||(43564593-43564662)
chr8 (249-326)||(31602917-31602996)
chr8 (249-326)||(39628841-39628920)
chr8 (249-326)||(39638391-39638470)
chr8 (241-326)||(9267998-9268084)
chr8 (249-326)||(26805028-26805106)
chr8 (241-326)||(29938290-29938376)
chr8 (241-326)||(31873615-31873701)
chr8 (241-326)||(32395232-32395318)
chr8 (241-327)||(5830941-5831028)
chr8 (241-327)||(6878511-6878598)
chr8 (241-327)||(24422505-24422592)
chr8 (249-323)||(28848959-28849034)
chr8 (241-327)||(30087923-30088010)
chr8 (241-327)||(30526156-30526243)
chr8 (249-326)||(1953272-1953350)
chr8 (241-326)||(11714438-11714524)
chr8 (241-326)||(14433344-14433430)
chr8 (249-326)||(16861952-16862030)
chr8 (249-326)||(29342706-29342784)
chr8 (249-326)||(29440864-29440942)
chr8 (241-326)||(31231070-31231156)
chr8 (241-326)||(35544188-35544274)
chr8 (249-326)||(38044914-38044992)
chr8 (249-326)||(38194670-38194748)
chr8 (249-326)||(41256404-41256482)
chr8 (241-321)||(899558-899639)
chr8 (293-326)||(16861746-16861779)
chr8 (249-326)||(26513689-26513766)
chr8 (249-326)||(28868722-28868799)
chr8 (292-329)||(31230473-31230510)
chr8 (249-329)||(35631024-35631105)
chr8 (292-328)||(543568-543604)
chr8 (249-326)||(11181242-11181321)
chr8 (255-326)||(18526333-18526405)
chr8 (249-326)||(26394023-26394102)
chr8 (241-328)||(39284194-39284282)
[»] chr2 (34 HSPs)
chr2 (335-487)||(23973362-23973516)
chr2 (539-625)||(23973608-23973694)
chr2 (255-326)||(40483605-40483676)
chr2 (249-326)||(37985524-37985601)
chr2 (241-328)||(30780054-30780142)
chr2 (249-329)||(43446531-43446611)
chr2 (249-292)||(28248492-28248535)
chr2 (249-327)||(38959734-38959813)
chr2 (241-326)||(325327-325413)
chr2 (249-326)||(5421433-5421511)
chr2 (249-326)||(14309108-14309186)
chr2 (249-326)||(22154216-22154294)
chr2 (482-524)||(23973550-23973592)
chr2 (249-326)||(27863004-27863082)
chr2 (249-327)||(43521597-43521675)
chr2 (249-322)||(14780906-14780979)
chr2 (249-326)||(40649052-40649129)
chr2 (249-329)||(3873614-3873696)
chr2 (241-327)||(28786919-28787006)
chr2 (249-329)||(32068419-32068501)
chr2 (241-326)||(7491649-7491735)
chr2 (249-326)||(11216592-11216670)
chr2 (249-326)||(16198392-16198470)
chr2 (241-326)||(19576046-19576132)
chr2 (265-326)||(23498037-23498099)
chr2 (249-326)||(30549773-30549851)
chr2 (249-326)||(37111205-37111283)
chr2 (249-327)||(1666962-1667042)
chr2 (249-329)||(34504338-34504419)
chr2 (249-326)||(36845820-36845896)
chr2 (273-331)||(40425188-40425248)
chr2 (293-329)||(3376427-3376463)
chr2 (255-326)||(8444207-8444279)
chr2 (255-319)||(19505842-19505906)
[»] scaffold0014 (1 HSPs)
scaffold0014 (330-477)||(125567-125715)
[»] chr6 (19 HSPs)
chr6 (325-476)||(16207923-16208074)
chr6 (241-327)||(9961314-9961401)
chr6 (249-326)||(34283343-34283421)
chr6 (249-326)||(2010272-2010350)
chr6 (249-326)||(10629520-10629598)
chr6 (249-326)||(16524721-16524799)
chr6 (249-331)||(31022590-31022672)
chr6 (241-326)||(31949336-31949422)
chr6 (241-326)||(32142375-32142461)
chr6 (265-326)||(29343975-29344038)
chr6 (241-327)||(11172884-11172971)
chr6 (250-328)||(12058567-12058646)
chr6 (241-326)||(8201460-8201546)
chr6 (249-326)||(16466365-16466443)
chr6 (249-326)||(4130853-4130930)
chr6 (292-329)||(6612625-6612662)
chr6 (249-326)||(24053149-24053226)
chr6 (241-326)||(9461573-9461660)
chr6 (249-326)||(24430148-24430227)
[»] scaffold0009 (1 HSPs)
scaffold0009 (249-327)||(8436-8514)
[»] scaffold0172 (1 HSPs)
scaffold0172 (241-326)||(18388-18474)
[»] scaffold0011 (1 HSPs)
scaffold0011 (241-326)||(63344-63430)
[»] scaffold0444 (1 HSPs)
scaffold0444 (249-327)||(7594-7673)
[»] scaffold0074 (1 HSPs)
scaffold0074 (249-326)||(17458-17536)
[»] scaffold0983 (1 HSPs)
scaffold0983 (249-326)||(1273-1352)
[»] scaffold0018 (1 HSPs)
scaffold0018 (249-326)||(151639-151718)
[»] scaffold0166 (1 HSPs)
scaffold0166 (249-326)||(23551-23629)
[»] scaffold0459 (1 HSPs)
scaffold0459 (249-326)||(11699-11778)
[»] scaffold0366 (1 HSPs)
scaffold0366 (249-326)||(13006-13085)


Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 45 - 326
Target Start/End: Complemental strand, 13095666 - 13095387
Alignment:
Q  45 taacaatttgtggagagatatagtcaatagttaagttcagtctctaatttaatttaatgtggattagtatgagaaccgtgaataacaataaatacatggg 144  Q
    ||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  13095666 taacaatttgtggagaga----gtcaatagttaagttcagtctctaatttaatttaatgtggattagtatgggaaccgtgaataacaataaatacatggg 13095571  T
Q  145 aaccatgaataaaaagttaattatggattatgagaaccttgaataaaaagttttggaaaaagagaatagacaagggtaaattaggaagaacatgaataat 244  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  13095570 aaccgtgaataaaaagttaattatggattatgagaaccttgaataaaaagttttggaaaaagagaatagacaagggcaaattaggaagaatatgaataat 13095471  T
Q  245 tttacattgatattgcaaaacgacttataatttgggacaa--aattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| |||||||||||| |||||||||||||||||||    ||||||||||||||||||| ||||||||||||||||||||    
T  13095470 tttacatcgatattgcaaaatgacttataatttgggacaattttttttttccaaaacgtcatatattgtgggacggagggagta 13095387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 112 - 326
Target Start/End: Complemental strand, 17381997 - 17381783
Alignment:
Q  112 tatgagaaccgtgaataacaataaatacatgggaaccatgaataaaaagttaattatggattatgagaaccttgaataaaaagttttggaaaaagagaat 211  Q
    |||| |||||||||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  17381997 tatgggaaccgtgaataacaatacatacatgggaaccgtgaataaaaagtgaattatcgattatgagaaccttgagtaaaaagttttggaaaaagagaat 17381898  T
Q  212 agacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgt 311  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  17381897 agacaagggcaaattaggaagaacatgaataatttttcattgatattacaaaacgacttataatttgggacaaaattttttccaaaacgtcatacactgt 17381798  T
Q  312 gggacggagggagta 326  Q
    |||||||||| ||||    
T  17381797 gggacggaggtagta 17381783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 330 - 477
Target Start/End: Complemental strand, 33536932 - 33536785
Alignment:
Q  330 tgaatcaacagtgtaatgaaacgggtaaaaaagtgagagtgtggtaaaaaactcaggattctcccatttcaaattttattaccacgttacccttcaataa 429  Q
    |||||||| |||||||||||  || || ||| || | |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  33536932 tgaatcaatagtgtaatgaagaggttagaaatgtcacagtgtggtaaaaaactcagggttctcccatttcaaattttattaccatgttatccttcaataa 33536833  T
Q  430 agcgaaattaaagtgcagttaaaaaagtagaagcagggacagttgtgc 477  Q
    || ||| ||| |||||||||||||| ||||||| ||||||||||||||    
T  33536832 agtgaacttacagtgcagttaaaaatgtagaaggagggacagttgtgc 33536785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 330 - 477
Target Start/End: Complemental strand, 33537209 - 33537062
Alignment:
Q  330 tgaatcaacagtgtaatgaaacgggtaaaaaagtgagagtgtggtaaaaaactcaggattctcccatttcaaattttattaccacgttacccttcaataa 429  Q
    |||||||| |||||||||||  || || ||| || | |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||    
T  33537209 tgaatcaatagtgtaatgaagaggttagaaatgtcacagtgtggtaaaaaactcagggttctcccatttcaaattttattaccatgttatccttcaataa 33537110  T
Q  430 agcgaaattaaagtgcagttaaaaaagtagaagcagggacagttgtgc 477  Q
    || ||| ||| |||||||||||||| ||||||| ||||||||||||||    
T  33537109 agtgaacttacagtgcagttaaaaatgtagaaggagggacagttgtgc 33537062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 19877831 - 19877753
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||||||||| || |||||| | ||||||||||||||||    
T  19877831 cattggtattgtaaagcgacatataatttgggacaaatattttttccaaagcgacatacaatttgggacggagggagta 19877753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 23138113 - 23138035
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| || |||||| | |||||||||||||||||    
T  23138113 cattggtattgtaaagcgacatataatttgggacaattttttttccaaagcgacatacaatttgggacggagggagtaa 23138035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 56235227 - 56235149
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  56235227 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 56235149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 13880537 - 13880449
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 328  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||||    
T  13880537 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaaa 13880449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 14965409 - 14965337
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||| |||| || ||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  14965409 tattgcaaagcgacatacaatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 14965337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 10125684 - 10125763
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||| ||||||| || |||||| | |||||||||||||||||    
T  10125684 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagtaa 10125763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 22100993 - 22100914
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| ||||||||||||||| ||||||| ||||| || |||||| | |||||||||||||||||    
T  22100993 cattggtattgtaaagcgacatataatttgggacaacatttttttccaaagcgacatacaatttgggacggagggagtaa 22100914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 23621725 - 23621638
Alignment:
Q  240 ataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  23621725 ataatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 23621638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 37175373 - 37175452
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||| ||||||| || |||||| | |||||||||||||||||    
T  37175373 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagtaa 37175452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 56038611 - 56038698
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  56038611 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 56038698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 56513658 - 56513737
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||||||||||||||||||||  |||||||||||  | |||||| | |||||||||||||||||    
T  56513658 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagggacatacaatttgggacggagggagtaa 56513737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 27851245 - 27851167
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| ||||||||||||||||| ||| |||||| ||||| || |||||| | ||||||||||||||||    
T  27851245 cattggtattgtaaagcgacttataatttgggataaattttttttccaaagcgacatacaatttgggacggagggagta 27851167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 28002592 - 28002514
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| ||||||||||||||||  ||||||||||| |  |||||| | ||||||||||||||||    
T  28002592 cattggtattgtaaaacgacatataatttgggacaaattttttttccaaagcaacatacaatttgggacggagggagta 28002514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 45250156 - 45250070
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  45250156 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 45250070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 52183933 - 52183855
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatt-ttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| |||||||| |||||||| |||||||||| |||||| || || |||||| | ||||| ||||||||||    
T  52183933 cattgatattgtaaaacgacatataatttaggacaaaatttttttccgaagcgacatacaatttgggatggagggagta 52183855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 44570871 - 44570794
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||||||||||| |||||| | |||||| ||| |||||    
T  44570871 cattggtattgtaaagcgacatataatttgggacaattttttttccaaaacggcatacaatttgggacagagagagta 44570794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 239 - 326
Target Start/End: Complemental strand, 288432 - 288344
Alignment:
Q  239 aataattttacattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||| || ||||| ||||| ||| |||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  288432 aataatatttcattggtattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 288344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 1788803 - 1788875
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||| |||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||    
T  1788803 tattgtaaagcgacatataatttgggacaaatattttttctaaagcgacatacaatttgggacggagggagta 1788875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 22320607 - 22320524
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt--ccaaaacgtcatacattgtgggacggagggagtaaaat 330  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||  ||||| || |||||| | |||||| |||||||||||||    
T  22320607 cattggtattgtaaagcgacatataatttgggacaaatttttttttccaaagcgacatacaatttgggacagagggagtaaaat 22320524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 29832261 - 29832348
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaaattttt--tccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||| |||||||| ||||| ||| |||| |||||||||||||||| |||||  || ||| || |||||| | ||||||||||||||||    
T  29832261 taatgttacattggtattgtaaagcgacatataatttgggacaaatttttttctctaaagcgacatacaatttgggacggagggagta 29832348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 53334060 - 53334139
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | |||||| |||||||||    
T  53334060 cattgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggaccgagggagta 53334139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 22019176 - 22019089
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  22019176 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 22019089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 23237086 - 23236997
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaaatttttt---ccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    |||| |||||||| ||||| ||| |||| |||||||||||||||| ||||||   | ||| || |||||| | |||||||||||||||||    
T  23237086 taatgttacattggtattgtaaagcgacatataatttgggacaaattttttttccctaaagcgacatacaatttgggacggagggagtaa 23236997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 4294132 - 4294210
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  4294132 cattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 4294210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 22842983 - 22842905
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  22842983 cattggtattgtaaagcgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 22842905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 29494958 - 29495044
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| | || || ||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||    
T  29494958 taatttttcattggtattgtaaagcaacatacaatttgggacaaatattttttctaaagcgacatacaatttgggacggagggagta 29495044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 30088793 - 30088879
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  30088793 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 30088879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 34447718 - 34447632
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| |||||  || |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  34447718 taatttttcattggtattgtgaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 34447632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 34735997 - 34735919
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||  |||||||| |||||||||||||||  ||||| || ||| || |||||| | ||||||||||||||||    
T  34735997 cattgatattttaaaacgacatataatttgggacaatttttttccctaaagcgacatacaatttgggacggagggagta 34735919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 47869236 - 47869322
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||| ||||||||||||    
T  47869236 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaattgacatacaatttggaacggagggagta 47869322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 49235954 - 49236040
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  49235954 taatttttcattggtattgtaaagcgacatagaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 49236040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 13397981 - 13398034
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttc 293  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| ||||||||    
T  13397981 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttc 13398034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 30649790 - 30649867
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| |  |||||| | ||| ||||||||||||    
T  30649790 cattggtattgtaaagcgacatataatttgggacaattttttttccaaagcaacatacaatttggaacggagggagta 30649867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 38852840 - 38852920
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa--attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| ||||||||||||||||   ||||||| |||||| |||||| | | |||||||||||||||    
T  38852840 cattggtattgtaaagcgacatataatttgggacaaatttttttttctaaaacgacatacaatttaggacggagggagtaa 38852920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 273 - 328
Target Start/End: Complemental strand, 23222525 - 23222469
Alignment:
Q  273 aatttgggacaaaattttttccaaaa-cgtcatacattgtgggacggagggagtaaa 328  Q
    ||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||||    
T  23222525 aatttgggacaaatttttttcctaaagcgacatacaatttgggacggagggagtaaa 23222469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 196; Significance: 1e-106; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 95 - 327
Target Start/End: Original strand, 19599348 - 19599582
Alignment:
Q  95 aatttaatgtggattagtatgagaaccgtgaataacaataaatacatgggaaccatgaataaaaagttaattatggattatgagaaccttgaataaaaag 194  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||    
T  19599348 aatttaatgtggattagtatgggaaccgtgaataacaataaatacatgggaaccgtgaataacaagtgaattatggattatgagaaccttgaataaaaag 19599447  T
Q  195 ttttggaaaaagagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaattttt--t 292  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||  |    
T  19599448 ttttggaaaaagagaatagacaagggcaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaattttttttct 19599547  T
Q  293 ccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    |||||||||||||||||||||||||||||||||||    
T  19599548 ccaaaacgtcatacattgtgggacggagggagtaa 19599582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 201 - 326
Target Start/End: Original strand, 13952147 - 13952273
Alignment:
Q  201 aaaaagagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaac 299  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||| |||||||    
T  13952147 aaaaagagaatagacaagggcaaattaggaagaacatgaataattttatattgatattgcaaaacggcttataatttgtgacaaatttttttcccaaaac 13952246  T
Q  300 gtcatacattgtgggacggagggagta 326  Q
    |||||||| | ||||||||||||||||    
T  13952247 gtcatacaatttgggacggagggagta 13952273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 29665392 - 29665314
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| |||||||| |||||||||||||||| ||||||||||||||| |||||| | | ||||||||||||||    
T  29665392 cattgatattgtaaaacgacatataatttgggacaaatattttttccaaaacgacatacaatttaggacggagggagta 29665314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 21195240 - 21195317
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||||||||||||||| || |||||| | ||||||||||||||||    
T  21195240 cattggtattgtaaagcgacatataatttgggacaaaattttttccaaagcgacatacaatttgggacggagggagta 21195317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 42 - 133
Target Start/End: Original strand, 13952002 - 13952094
Alignment:
Q  42 gagtaacaatttgtggagagatatagtcaatagttaagttcagtctct-aatttaatttaatgtggattag--tatgagaaccgtgaataacaat 133  Q
    ||||||||||||||||||||  | |||| |||||||| |||||||||| ||||||||||||| ||||||||  |||| |||||||||||||||||    
T  13952002 gagtaacaatttgtggagag--agagtctatagttaacttcagtctctaaatttaatttaatatggattagtatatgggaaccgtgaataacaat 13952094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 18026103 - 18026182
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||||||||| || |||||| | |||||||||||||||||    
T  18026103 cattgatattgtaaagcgacatataatttgggacaaatattttttccaaagcgacatacaatttgggacggagggagtaa 18026182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 4431590 - 4431512
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||| |||||||| |||||| | ||||||||||||||||    
T  4431590 cattgatattgtaaagcgacatataatttgagacaaaatttttttccaaaacgacatacaatttgggacggagggagta 4431512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 22510478 - 22510400
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  22510478 cattgatattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 22510400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 33858 - 33937
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||||||| |||| ||||||||||||||||  ||||||||||| || |||||| | |||||||||||||||||    
T  33858 cattggtattgcaaagcgacatataatttgggacaaagtttttttccaaagcgacatacaatttgggacggagggagtaa 33937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 35189263 - 35189176
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||| | |||||||||||||||||    
T  35189263 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagtaa 35189176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 249 - 331
Target Start/End: Original strand, 38394330 - 38394413
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagtaaaatg 331  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||| |||||||||| |||||| | |||||||||||||||| ||||    
T  38394330 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagtataatg 38394413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 29619413 - 29619499
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  29619413 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 29619499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 4744782 - 4744705
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | |||||||||| |||||    
T  4744782 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacggagagagta 4744705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 39932888 - 39932811
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  39932888 cattggtattgtaaagcgacatataatttgggacaattttttttccaaagcgacatacaatttgggacggagggagta 39932811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 27187408 - 27187495
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| ||||||||||||  | |||||| | | |||||||||||||||    
T  27187408 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttccaaagtgacatacaatttaggacggagggagtaa 27187495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 5070857 - 5070779
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||| ||||| |||||| ||||| || |||||| | ||||||||||||||||    
T  5070857 cattgatattgtaaagcgacatataatttggaacaaattttttttccaaagcgacatacaatttgggacggagggagta 5070779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 5378161 - 5378247
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  5378161 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 5378247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 10370633 - 10370547
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||  ||| |||||| ||| |||| |||||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  10370633 taattttttattaatattgtaaagcgacatataatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 10370547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 32706793 - 32706731
Alignment:
Q  265 cgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||| |||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  32706793 cgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 32706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 40555147 - 40555069
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||||| |||||| | ||||| ||||||||||    
T  40555147 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaaaacgacatacaatttgggatggagggagta 40555069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 241 - 329
Target Start/End: Complemental strand, 9461444 - 9461355
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| ||| ||  ||||| | |||||| ||||||||||||    
T  9461444 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagcgaaatacaatttgggacagagggagtaaaa 9461355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 11313023 - 11312946
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| |||||||| ||| ||| ||||||| |||  |||||||| | ||||||||||||||||    
T  11313023 cattggtattgtaaaacgacatataatttaggataaatttttttctaaagtgtcatacaatttgggacggagggagta 11312946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 15268477 - 15268554
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||| ||| |||||||||||||| |||||| | |||||  |||||||||    
T  15268477 cattggtattgtaaagcgacatataatttgggataaatttttttccaaaacgacatacaatttgggatcgagggagta 15268554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 8035821 - 8035742
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt--ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||  |||||||| |||||| | |||||| |||||||||    
T  8035821 cattggtattgtaaagcgacatataatttgggacaaatttttttttccaaaacgacatacaatttgggacagagggagta 8035742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 18652455 - 18652491
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||||||||||||| |||||||||||||||||||    
T  18652455 ccaaaacgtcatacattttgggacggagggagtaaaa 18652491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 25538126 - 25538039
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    |||| |||||||| ||||| |||||||| |||||||| | ||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  25538126 taatgttacattggtattgtaaaacgacatataatttagaacaaatttttttccctaaagcgacatacaatttgggacggagggagta 25538039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 36302454 - 36302542
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 328  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | |||||| |||||||||||    
T  36302454 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacagagggagtaaa 36302542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 329
Target Start/End: Complemental strand, 5288924 - 5288842
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||| ||||| ||| |||| ||||||||| |||||| ||||| ||  |||||| |||||| | |||||||||||||||||||    
T  5288924 cattggtattgtaaagcgacatataatttgagacaaattttttcccctaaaacgacatacaatttgggacggagggagtaaaa 5288842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 7458654 - 7458576
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  7458654 cattggtattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 7458576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 8542846 - 8542760
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||| ||||||    
T  8542846 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggaaggagta 8542760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 9641097 - 9641019
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||| || |||||| | |||||| |||| ||||    
T  9641097 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagcgacatacaatttgggacagaggaagta 9641019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 330
Target Start/End: Complemental strand, 11130237 - 11130147
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaat 330  Q
    ||||||| ||||| ||||| |||||||| || ||||| ||||||| |||||||| |||    |||||| | ||||||||||||||||||||    
T  11130237 taatttttcattggtattgtaaaacgacatacaatttaggacaaatattttttctaaagtaacatacaatttgggacggagggagtaaaat 11130147  T

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Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 12360873 - 12360787
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  12360873 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 12360787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 19712560 - 19712482
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| ||||||||||||| |||||||  ||||||||||| || |||||| | ||||||||||| ||||    
T  19712560 cattggtattgtaaagcgacttataatttaggacaaattttttttccaaagcgacatacaatttgggacggaggcagta 19712482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 24781168 - 24781246
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||| ||||||| || |||||| | ||||||||||||||||    
T  24781168 cattggtattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 24781246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 34900204 - 34900284
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaa---aattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||     |||||||||||||| |||||| | ||||||||||||||||    
T  34900204 cattggtattgtaaagcgacatataatttgggacaatttttttttttccaaaacgacatacaatttgggacggagggagta 34900284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 1887324 - 1887361
Alignment:
Q  251 ttgatattgcaaaacgacttataatttgggacaaaatt 288  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  1887324 ttgatattctaaaacgacttataatttgggacaaaatt 1887361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 19282645 - 19282726
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaa-cgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||| ||||| ||| |||| ||||||||| |||||| |||||| | ||| || |||||| | |||||||||||||||||||    
T  19282645 cattggtattgtaaagcgacgtataatttgagacaaatttttttgctaaagcgacatacaatttgggacggagggagtaaaa 19282726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 35584917 - 35584998
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaa-cgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||| | ||| || |||||| | |||||||||||||||||||    
T  35584917 cattggtattgtaaagcgacatataatttgggacaatttttttttctaaagcgacatacaatttgggacggagggagtaaaa 35584998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 324
Target Start/End: Complemental strand, 2914501 - 2914425
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggag 324  Q
    ||||| ||||| ||| |||| ||||||||||||||||  |||||| |||| || |||||| | ||||||||||||||    
T  2914501 cattggtattgtaaagcgacatataatttgggacaaatttttttttcaaagcgacatacaatttgggacggagggag 2914425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 32706982 - 32707018
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||||||||||| | |||||||||||||||||||    
T  32706982 ccaaaacgtcatacaatttgggacggagggagtaaaa 32707018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 33629939 - 33630011
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||| |||| ||||||||||||||||  ||||||||| |||| |||||| | |||||| |||||||||    
T  33629939 tattgtaaagcgacatataatttgggacaaattttttttccagaacgacatacaatttgggactgagggagta 33630011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 181; Significance: 2e-97; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 106 - 326
Target Start/End: Complemental strand, 38202064 - 38201844
Alignment:
Q  106 gattagtatgagaaccgtgaataacaataaatacatgggaaccatgaataaaaagttaattatggattatgagaaccttgaataaaaagttttggaaaaa 205  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  38202064 gattagtatgggaaccgtgaataacaataaatacatgggaaccgtgaataaaaagtgaattatcgattatgagaaccttgaataaaaagttttggaaaaa 38201965  T
Q  206 gagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcata 305  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||  |||||||||||||||||||    
T  38201964 gagaatagacaagggcaaattaggaagaacatgaataattttacattgatattgcaaaacaacttataatttaggacaattttttttccaaaacgtcata 38201865  T
Q  306 cattgtgggacggagggagta 326  Q
    ||||||||||||| |||||||    
T  38201864 cattgtgggacggtgggagta 38201844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 19 - 327
Target Start/End: Original strand, 4756407 - 4756710
Alignment:
Q  19 agatacaggtttataaagagtcagagtaacaatttgtggagagatatagtcaatagttaagttcagtctctaatttaatttaatgtggattagtatgaga 118  Q
    ||||||| |||||||||||||| |||||||||||||||||||||    ||||||||||||||||| | || ||||||||| ||||| ||||| |||| ||    
T  4756407 agatacaagtttataaagagtctgagtaacaatttgtggagaga----gtcaatagttaagttcaatgtcaaatttaatt-aatgtagatta-tatggga 4756500  T
Q  119 accgtgaataacaata---aatacatgggaaccatgaataaaaagttaat-tatggattatgagaaccttgaataaaaagttttggaaaaagagaataga 214  Q
    ||| ||||||||||||   ||| |||||||||| ||||||    || ||| ||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  4756501 accatgaataacaatagtaaatgcatgggaaccgtgaata----gtgaatatattgattatgagaaccttgaataaaaagttttggaaaaagagaatgga 4756596  T
Q  215 caagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgg 313  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| || | ||||||||||    
T  4756597 caagggtaaattaggaagaacatgaaaaattttacattgatattgcaaaacgacttataatttgggacaaatgttttttccaaagcgacttacattgtgg 4756696  T
Q  314 gacggagggagtaa 327  Q
    ||||||||||||||    
T  4756697 gacggagggagtaa 4756710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 31023793 - 31023870
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| |||||||| |||||||||||||||  |||||||||||||| |||||| | ||||||| || |||||    
T  31023793 cattgatattgtaaaacgacatataatttgggacaattttttttccaaaacgacatacaatttgggacgaagagagta 31023870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 325
Target Start/End: Original strand, 5653683 - 5653768
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagt 325  Q
    ||||||| ||||| ||||| |||||||| || ||||||||||||| |||||||| |||| | |||||| | |||||||||||||||    
T  5653683 taatttttcattggtattgtaaaacgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagt 5653768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 23825205 - 23825282
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || | |||| | ||||||||||||||||    
T  23825205 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacgtacaatttgggacggagggagta 23825282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 28121332 - 28121255
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||| ||||| |||||||||||||| |||||| | | ||||||||||||||    
T  28121332 cattggtattgtaaagcgacatataatttggaacaaatttttttccaaaacgacatacaatttaggacggagggagta 28121255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 39673701 - 39673780
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt--ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| |||||||||||||||  ||||  |||||||||| |||||| | ||||||||||||||||    
T  39673701 cattggtattgtaaaacgacatataatttgggacaattttttttttccaaaacgacatacaatttgggacggagggagta 39673780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 6920925 - 6921011
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  6920925 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 6921011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 13352529 - 13352451
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||||  | |||||| | ||||||||||||||||    
T  13352529 cattggtattgtaaagcgacatataatttgggacaaatattttttccaaagggacatacaatttgggacggagggagta 13352451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 31500730 - 31500808
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||| |||||| |||| | | |||||||||||||||||    
T  31500730 cattggtattgtaaagcgacatataatttgggacaattttttttctaaaacgacatataatttgggacggagggagtaa 31500808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 33488105 - 33488183
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  33488105 cattggtattgtaaaacgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 33488183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 38238952 - 38238866
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  38238952 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 38238866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 51417570 - 51417648
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| |||||||||||| |||  ||||||||||| || |||||| | ||||||||||||||||    
T  51417570 cattggtattgtaaaacgacatataatttgggataaattttttttccaaagcgacatacaatttgggacggagggagta 51417648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 30679359 - 30679271
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 328  Q
    ||||||| ||||| ||||| ||||| || || |||||| |||||| |||||||| |||  | |||||||| ||||||||||||||||||    
T  30679359 taatttttcattggtattgtaaaacaacatacaatttgagacaaatattttttctaaagtgacatacattttgggacggagggagtaaa 30679271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 39655431 - 39655352
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttt--tccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||| |||| |||||||| ||||||||||||||||||||||  || ||| || |||||| | |||||||||| |||||    
T  39655431 cattgacattgtaaaacgacatataatttgggacaaaatttttcctctaaagcgacatacaatttgggacggagagagta 39655352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 50324913 - 50324825
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 328  Q
    ||||||| ||||| ||||| ||| |||| || ||||||| ||||| |||||||| |||  | |||||||| ||||||||||||||||||    
T  50324913 taatttttcattggtattgtaaagcgacatacaatttggaacaaatattttttctaaagtgacatacattttgggacggagggagtaaa 50324825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 4226317 - 4226238
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||||||| |||  ||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  4226317 cattgatattgtaaagtgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 4226238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 34347357 - 34347274
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggaggga 323  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||||||    
T  34347357 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggaggga 34347274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 51905800 - 51905879
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||||||| ||||| |||||| |||| ||||||| || |||||| | |||||||||||||||||    
T  51905800 cattggtattgtaaagcgacttatcatttgtgacaaattttttttccaaagcgacatacaatttgggacggagggagtaa 51905879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 261 - 326
Target Start/End: Complemental strand, 2733907 - 2733841
Alignment:
Q  261 aaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  2733907 aaaacgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 2733841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 6540667 - 6540745
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaa-aattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||||||||   |||||| |||| || |||||| | ||||||||||||||||    
T  6540667 cattgatattgtaaagcgacatataatttgggacaattttttttttcaaagcgacatacaatttgggacggagggagta 6540745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 18127420 - 18127334
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||  |||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  18127420 taattttttattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 18127334  T

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Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 31045538 - 31045624
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||  | |||| | | ||||||||||||||||    
T  31045538 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacataaaatttgggacggagggagta 31045624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 32145439 - 32145353
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||  |||| ||||| ||| |||| || ||||||||||||| ||||||||||||  | |||||| | ||||||||||||||||    
T  32145439 taattttttattggtattgtaaagcgacatacaatttgggacaaatattttttccaaagtgacatacaatttgggacggagggagta 32145353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 35369597 - 35369675
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||| |||||||||| |||||  | ||||||||||||||||    
T  35369597 cattggtattgtaaagcgacatataatttgggacaatttttttttccaaaacgacatacgatttgggacggagggagta 35369675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 42219790 - 42219868
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | | ||||||||||||||    
T  42219790 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttaggacggagggagta 42219868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 83110 - 83187
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||| |||||  ||||||||||| || |||||| | | ||||||||||||||    
T  83110 cattggtattgtaaagcgacatataatttgagacaattttttttccaaagcgacatacaatttaggacggagggagta 83187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 26061865 - 26061910
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc 294  Q
    ||||||||||| |||||||| |||||||||||||||  ||||||||    
T  26061865 cattgatattgtaaaacgacatataatttgggacaattttttttcc 26061910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 294
Target Start/End: Original strand, 52001212 - 52001257
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc 294  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||||||    
T  52001212 cattgatattgtaaagcgacatataatttgggacaaatttttttcc 52001257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Original strand, 52667061 - 52667094
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||||||||| ||||||||||||||||    
T  52667061 ccaaaacgtcatacattttgggacggagggagta 52667094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 7572508 - 7572587
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttt--tccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||||||||  |||||||| |||||| |||||  || ||| || |||||| | ||||||||||||||||    
T  7572508 cattgatattgtaaaacgacaaataatttgcgacaaatttttttctctaaagcgacatacaatttgggacggagggagta 7572587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 9264988 - 9265067
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| ||||||||||||||||  |||| ||  |||||| |||| ||  ||||||||||||||||    
T  9264988 cattgatattgtaaagcgacatataatttgggacaaatattttcccctaaaacgacatatatattgggacggagggagta 9265067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 15170268 - 15170347
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt--ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||  |||||||||||||||| ||||  ||||||| || |||||| | ||||||||||||||||    
T  15170268 cattggtattgtaaagcgaaatataatttgggacaaatttttttttccaaagcgacatacaatttgggacggagggagta 15170347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 16051851 - 16051930
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| || ||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  16051851 cattggtattgtaaagcgacatacaatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 16051930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 35379717 - 35379796
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttc--caaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||||  |||| || |||||| | ||||||||||||||||    
T  35379717 cattggtattgtaaagcgacatataatttgggacaattttttttcttcaaagcgacatacaatttgggacggagggagta 35379796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 157; Significance: 4e-83; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 95 - 319
Target Start/End: Original strand, 21945274 - 21945498
Alignment:
Q  95 aatttaatgtggattagtatgagaaccgtgaataacaataaatacatgggaaccatgaataaaaagttaattatggattatgagaaccttgaataaaaag 194  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||||||       
T  21945274 aatttaatgtggattagtatgagaaccgtgaataacaataaatacatgagaaccgtgaataaaaagtgaattatggattatgagaaccttgaataaattt 21945373  T
Q  195 ttttggaaaaagagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaaattttttcc 294  Q
    ||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |     ||||||||    
T  21945374 ttttggaaaaagagaatagaagagggcaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgacaattttttttttcc 21945473  T
Q  295 aaaacgtcatacattgtgggacgga 319  Q
    ||||||||||||||||| |||||||    
T  21945474 aaaacgtcatacattgtaggacgga 21945498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 31466126 - 31466048
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  31466126 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 31466048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 36669731 - 36669809
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||| |||||||||| |||||| | ||||||||||||||||    
T  36669731 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 36669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 36916752 - 36916665
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||||||||| ||| ||| ||||||||||||||||| |||||||  |||| | |||||| | | |||||||||||||||    
T  36916752 taatttttcattgatattgtaaagcgatttataatttgggacaaatattttttttaaaatgacatacaatttaggacggagggagtaa 36916665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 48339518 - 48339447
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| |||||||| |||||||||||||||  ||||||||||| || |||||| | ||||||| ||||||||    
T  48339518 tattgtaaaacgacatataatttgggacaattttttttccaaagcgacatacaatttgggacgaagggagta 48339447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 13439403 - 13439317
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  13439403 taatttttcattggtattgtaaagcgacgtataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 13439317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 28536956 - 28537042
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| ||||||||| |||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  28536956 taatttttcattggtattgtaaagcgacatataatttgagacaaatattttttctaaaatgacatacaatttgggacggagggagta 28537042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 31502886 - 31502808
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||| | ||| || |||||| | ||||||||||||||||    
T  31502886 cattgatattgtaaagcgacatataatttgggacaaatatttttcctaaagcgacatacaatttgggacggagggagta 31502808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 44894769 - 44894855
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  44894769 taatttttcattgatattgtaaagcgacatataatttgtgacaaatattttttctaaagtgacatacaatttgggacggagggagta 44894855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 47578875 - 47578961
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| |||||||| || |||||||||||||  |||||| |||  | |||||| | |||||||||||||||||    
T  47578875 taatttttcattggtattgtaaaacgacatacaatttgggacaaatatttttctaaagtgacatacaatttgggacggagggagtaa 47578961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 22369582 - 22369503
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||| ||||||||||||  ||| || |||||| | ||||||||||||||||    
T  22369582 cattggtattgtaaagcgacatataatttgggagaaaattttttccctaaagcgacatacaatttgggacggagggagta 22369503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 6882926 - 6882839
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  |  ||||| | |||||||||||||||||    
T  6882926 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgatatacaatttgggacggagggagtaa 6882839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 10453102 - 10453189
Alignment:
Q  240 ataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||| ||||| ||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  10453102 ataatttttcattggtattgtaaagcgacgtataatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagta 10453189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 4513555 - 4513641
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||  ||||| |||||||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  4513555 taatttttcattagtattgtaaaacgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 4513641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 8611899 - 8611813
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||| ||||    
T  8611899 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggaggaagta 8611813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 11910627 - 11910713
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| |||||| | |||||||||||||||| |||||||| |||  | |||||| | |||||||| |||||||    
T  11910627 taatttttcattggtattgtaaaacggcatataatttgggacaaatattttttctaaagtgacatacaatttgggacggggggagta 11910713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 23059156 - 23059070
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||  |||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  23059156 taattttttattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 23059070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 28703621 - 28703543
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  28703621 cattggtattgtaaagcgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 28703543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 29410289 - 29410367
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||| ||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||| ||||||    
T  29410289 cattggtattgtaaaatgacatataatttgggacaaatttttttcctaaagcgacatacaatttgggacggaaggagta 29410367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 29985965 - 29986051
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| || ||||| ||||||| ||||||| ||||  | |||||| | ||||||||||||||||    
T  29985965 taatttttcattgatattgtaaagcgacatacaatttaggacaaatatttttttcaaagtggcatacaatttgggacggagggagta 29986051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 325
Target Start/End: Complemental strand, 30264505 - 30264427
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttcc-aaaacgtcatacattgtgggacggagggagt 325  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||| ||| || |||||| | |||||||||||||||    
T  30264505 cattggtattgtaaagcgacatataatttgggacaaatattttttcctaaagcgacatacaatttgggacggagggagt 30264427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 30803362 - 30803288
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggaggg 322  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||    
T  30803362 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggaggg 30803288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 250 - 316
Target Start/End: Original strand, 32466362 - 32466428
Alignment:
Q  250 attgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggac 316  Q
    |||| ||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | ||||||    
T  32466362 attggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggac 32466428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 35144282 - 35144368
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||| |||||    
T  35144282 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagagagta 35144368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 40536984 - 40537062
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||| | | ||||||||||||||||    
T  40536984 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatataatttgggacggagggagta 40537062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 44481072 - 44480986
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  44481072 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 44480986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 46373198 - 46373284
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  46373198 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 46373284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 47834347 - 47834433
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | || || ||||||||||    
T  47834347 taatttttcattgatattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgagatggagggagta 47834433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 10316635 - 10316551
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggaggga 323  Q
    |||| |||||||| ||||| |||||||  |||||||||||||||  ||||||||  ||| || |||||| | |||||||||||||    
T  10316635 taatgttacattggtattgtaaaacgaaatataatttgggacaagtttttttccttaaagcgacatacaatttgggacggaggga 10316551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 17611508 - 17611585
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| || |||||| | |||||| ||| |||||    
T  17611508 cattggtattgtaaagcgacatataatttgggacaattttttttccaaagcgacatacaatttgggacagagagagta 17611585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 23709637 - 23709560
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||| || ||  ||||||||||| || |||||| | ||||||||||||||||    
T  23709637 cattggtattgtaaagcgacatataatttgagataattttttttccaaagcgacatacaatttgggacggagggagta 23709560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 22326729 - 22326808
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||| ||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  22326729 cattggtattgtaaagcgacatataatttggaacaaatttttttccctaaagcgacatacaatttgggacggagggagta 22326808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 292 - 332
Target Start/End: Original strand, 22918412 - 22918452
Alignment:
Q  292 tccaaaacgtcatacattgtgggacggagggagtaaaatga 332  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  22918412 tccaaaacgtcatacaatttgggacggagggagtaatatga 22918452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 23726406 - 23726370
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||||||||||| | |||||||||||||||||||    
T  23726406 ccaaaacgtcatacaatttgggacggagggagtaaaa 23726370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 27059748 - 27059820
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | |||||||| |||||||    
T  27059748 tattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggtgggagta 27059820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 251 - 299
Target Start/End: Original strand, 30643239 - 30643286
Alignment:
Q  251 ttgatattgcaaaacgacttataatttgggacaaaattttttccaaaac 299  Q
    ||||||||| |||| |||||| ||||||||||||| |||||||||||||    
T  30643239 ttgatattgtaaaatgactta-aatttgggacaaacttttttccaaaac 30643286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 32467879 - 32467807
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||| |||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  32467879 tattgtaaagcgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 32467807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 38074752 - 38074788
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||||||||||| | |||||||||||||||||||    
T  38074752 ccaaaacgtcatacaatttgggacggagggagtaaaa 38074788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 43884156 - 43884120
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||||||||||| | |||||||||||||||||||    
T  43884156 ccaaaacgtcatacaatttgggacggagggagtaaaa 43884120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 4e-83; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 19 - 326
Target Start/End: Original strand, 53536681 - 53536983
Alignment:
Q  19 agatacaggtttataaagagtcagagtaacaatttgtggagagatatagtcaatagttaagttcagtctctaatttaatttaatgtggattagtatgaga 118  Q
    ||||||| |||||||||||||| |||||||||||||||||||||    ||||||||||||||||| | || ||||||||| ||||| ||||| |||| ||    
T  53536681 agatacaagtttataaagagtctgagtaacaatttgtggagaga----gtcaatagttaagttcaatgtcaaatttaatt-aatgtagatta-tatggga 53536774  T
Q  119 accgtgaataacaata---aatacatgggaaccatgaataaaaagttaat-tatggattatgagaaccttgaataaaaagttttggaaaaagagaataga 214  Q
    ||||||||||||||||   ||| |||||||||| ||||||    || ||| ||| |||||||||||||||||||||||||||||||||||||||||| ||    
T  53536775 accgtgaataacaatagtaaatgcatgggaaccgtgaata----gtgaatatattgattatgagaaccttgaataaaaagttttggaaaaagagaatgga 53536870  T
Q  215 caagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgg 313  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||| || | ||| ||||||    
T  53536871 aaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataatttgagacaaatgttttttccaaagcgacttaccttgtgg 53536970  T
Q  314 gacggagggagta 326  Q
    |||||||||||||    
T  53536971 gacggagggagta 53536983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 112 - 275
Target Start/End: Original strand, 53533245 - 53533408
Alignment:
Q  112 tatgagaaccgtgaataacaata---aatacatgggaaccatgaataaaaagttaat-tatggattatgagaaccttgaataaaaagttttggaaaaaga 207  Q
    |||| ||||||||||||||||||   ||| |||||||||| ||||||    || ||| ||| ||||||||||||||||||||||||||||||||||||||    
T  53533245 tatgggaaccgtgaataacaatagtaaatgcatgggaaccgtgaata----gtgaatatattgattatgagaaccttgaataaaaagttttggaaaaaga 53533340  T
Q  208 gaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgacttataat 275  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  53533341 gaatggacaagggtaaattaggaagaacatgaacaattttacattgatattgcaaaacgacttataat 53533408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 40710708 - 40710794
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||| |||||||||||||| ||| |||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||    
T  40710708 taatgttacattgatattgtaaagcgacatataatttgggacaaatattttttctaaagcgacatacaatttgggacggagggagta 40710794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 8724357 - 8724279
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  8724357 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 8724279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 9076244 - 9076166
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  9076244 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgacatacaatttgggacggagggagta 9076166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 41751187 - 41751101
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  41751187 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 41751101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 32078097 - 32078017
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaa--ttttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| |||||||| ||||||||||||||||   |||||| ||||||| |||||| | |||||||||||||||||    
T  32078097 cattggtattgtaaaacgacatataatttgggacaaatattttttttcaaaacgacatacaatttgggacggagggagtaa 32078017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 39259336 - 39259257
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||||| |||||    
T  39259336 cattgatattgtaaagcgacatataatttgggacaaatttttttcctaaagcgacatacaatttgggacggaggaagtaa 39259257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 43599657 - 43599570
Alignment:
Q  240 ataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  43599657 ataatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 43599570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Original strand, 45824080 - 45824167
Alignment:
Q  240 ataattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  45824080 ataatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 45824167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 22926114 - 22926036
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| ||||||||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  22926114 cattggtattgtaaagcgacttataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 22926036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 23609429 - 23609515
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| ||| || |||||| | ||||||||||||||||    
T  23609429 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagcgacatacaatttgggacggagggagta 23609515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 25904104 - 25904190
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  25904104 taatttttcattgatattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 25904190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 34663516 - 34663430
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  34663516 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 34663430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 35084533 - 35084619
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||| | ||| |||| |||||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  35084533 taatttttcattggtatcgtaaagcgacatataatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 35084619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 38783637 - 38783723
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  38783637 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 38783723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 43185422 - 43185344
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| ||||| || |||||| | ||||||||||||||||    
T  43185422 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 43185344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 52040445 - 52040531
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||||| ||||||||||||||||    
T  52040445 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacattttgggacggagggagta 52040531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 52870641 - 52870719
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  52870641 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 52870719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 9794550 - 9794474
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  9794550 cattggtattgtaaagcgacatataatttgggacaat-ttttttccaaagcgacatacaatttgggacggagggagta 9794474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 3348986 - 3349030
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttc 293  Q
    ||||||||||| ||||||||||||||||| ||||||| |||||||    
T  3348986 cattgatattgtaaaacgacttataatttaggacaaatttttttc 3349030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 24089414 - 24089327
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| |||||||| ||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  24089414 taatttttcattggtattgtaaagcgacatataatttcggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 24089327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 3645901 - 3645987
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| |||||||| ||||||| |||||||| |||  | |||||| | ||||||||| ||||||    
T  3645901 taatttttcattgatattgtaaagcgacatataatttaggacaaatattttttctaaagtgacatacaatttgggacggaaggagta 3645987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 19961021 - 19961107
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| |||||||| || |||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  19961021 taatttttcattggtattgtaaaacgacatacaatttgtgacaaatattttttctaaagtgacatacaatttgggacggagggagta 19961107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 29652071 - 29651993
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||| ||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  29652071 cattgatattgtaaagcgacatataatttggaacaaatattttttctaaagtgacatacaatttgggacggagggagta 29651993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 30190409 - 30190323
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| |||  | |||||| | || |||||| ||||||    
T  30190409 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttctaaagtgacatacaatttgagacggatggagta 30190323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 34817108 - 34817186
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaa-aattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| |||||||||||||||   |||||||||||  | |||||| | ||||||||||||||||    
T  34817108 cattggtattgtaaaacgacatataatttgggacaatttttttttccaaagtgacatacaatttgggacggagggagta 34817186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 39290614 - 39290536
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||| ||||||| |||||||||||| ||  ||||| | ||||||||||||||||    
T  39290614 cattggtattgtaaagcgacatataatttaggacaaatattttttccaaagcgagatacaatttgggacggagggagta 39290536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 240 - 326
Target Start/End: Complemental strand, 41979962 - 41979876
Alignment:
Q  240 ataattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||| ||||| ||||| ||| |||| |||||||| ||||||| ||||||| |||  | | |||| | ||||||||||||||||    
T  41979962 ataatttttcattggtattgtaaagcgacatataatttaggacaaatttttttctaaagtgacgtacaatttgggacggagggagta 41979876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 45347203 - 45347283
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa---attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| |||||||| |||||||||||| |||    |||||||||||||| | | || | ||||||||||||||||    
T  45347203 cattgatattgtaaaacgacgtataatttgggataaatattttttttccaaaacgacgttcaatttgggacggagggagta 45347283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 47109266 - 47109344
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  |||||| |||| || |||||| | ||||||||||||||||    
T  47109266 cattggtattgtaaagcgacatataatttgggacaaatttttttttcaaagcgacatacaatttgggacggagggagta 47109344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 47498108 - 47498186
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||  |||||||||||||||  |||| |||||||||| |||||| | ||||||||||||||||    
T  47498108 cattggtattgtaaagcgatatataatttgggacaatttttttttccaaaacgacatacaatttgggacggagggagta 47498186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 48333796 - 48333710
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| | || |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  48333796 taatttttcattggtattgtaaagcaacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 48333710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 52060467 - 52060553
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  52060467 taatttttcattggtattgtaaagcgacatataatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagta 52060553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 54747903 - 54747989
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||| ||||||    
T  54747903 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggaaggagta 54747989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 323
Target Start/End: Complemental strand, 38808165 - 38808089
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaa--aattttttccaaaacgtcatacattgtgggacggaggga 323  Q
    ||||| ||||| |||||||| |||||||||||||||    ||||||||||||||  ||||| | |||||||||||||    
T  38808165 cattggtattgtaaaacgacatataatttgggacaattttttttttccaaaacgatatacaatttgggacggaggga 38808089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 326
Target Start/End: Complemental strand, 41265588 - 41265511
Alignment:
Q  250 attgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||| ||||| ||||| || ||||||||||||||||  |||||||||||  | |||||| | ||||||||||||||||    
T  41265588 attggtattgtaaaacaacatataatttgggacaaattttttttccaaagggacatacaatttgggacggagggagta 41265511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 321
Target Start/End: Complemental strand, 49102511 - 49102436
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt---ttccaaaacgtcatacattgtgggacggagg 321  Q
    ||||||||||| |||||||  |||||||||||||||  ||||   |||||||||| |||||| | |||||||||||    
T  49102511 cattgatattgtaaaacgatatataatttgggacaattttttttcttccaaaacgacatacaatttgggacggagg 49102436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 254 - 326
Target Start/End: Original strand, 51380233 - 51380306
Alignment:
Q  254 atattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||| ||||||    
T  51380233 atattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggaaggagta 51380306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 329
Target Start/End: Original strand, 43185595 - 43185631
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||||||||||| | |||||||||||||||||||    
T  43185595 ccaaaacgtcatacaatttgggacggagggagtaaaa 43185631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 43600946 - 43600867
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||| ||||    
T  43600946 cattggtattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggaggaagta 43600867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 51571830 - 51571751
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | | ||||||||||||||    
T  51571830 cattggtattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttaggacggagggagta 51571751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 275 - 326
Target Start/End: Original strand, 53533634 - 53533686
Alignment:
Q  275 tttgggacaaaa-ttttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||||||  ||||||||||| || | |||||||||||||||||||||||    
T  53533634 tttgggacaaatgttttttccaaagcgacttacattgtgggacggagggagta 53533686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 2e-57; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 170 - 326
Target Start/End: Original strand, 42919021 - 42919178
Alignment:
Q  170 gattatgagaaccttgaataaaaagttttggaaaaagagaatagacaagggtaaattaggaagaacatgaataattttacattgatattgcaaaacgact 269  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42919021 gattatgagaaccttgaataaaaagttttggaaaaagagaatggacaagggcaaattagaaagaacatgaataattttacattgatattgcaaaacgact 42919120  T
Q  270 tataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||| |||||||  ||||||||||| || | || ||||||||||||||||||||    
T  42919121 tataatttaggacaaatgttttttccaaagcgacttatattgtgggacggagggagta 42919178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 19 - 110
Target Start/End: Original strand, 42918900 - 42918986
Alignment:
Q  19 agatacaggtttataaagagtcagagtaacaatttgtggagagatatagtcaatagttaagttcagtctctaatttaatttaatgtggatta 110  Q
    |||||||||||||||||||||| ||||||||||||||||||||    |||||||||||||||||| | || ||||||| |||||||||||||    
T  42918900 agatacaggtttataaagagtctgagtaacaatttgtggagag----agtcaatagttaagttcaatgtcaaatttaa-ttaatgtggatta 42918986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 15225917 - 15225840
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||||||||| || |||||| | ||||||||||||||||    
T  15225917 cattggtattgtaaaacgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacggagggagta 15225840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 12988185 - 12988265
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| |||||||||||||||||||||||||  |||||| |||||| | |||||||||||||||||    
T  12988185 cattggtattgtaaagcgacatataatttgggacaaaattttttccctaaaacgacatacaatttgggacggagggagtaa 12988265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 31692811 - 31692734
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | ||||||||||||||||    
T  31692811 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacggagggagta 31692734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 45439598 - 45439513
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||| |||||||| ||||| |||||||| |||||||||| ||||| |||||||| || || |||||| | ||||||||||||||||    
T  45439598 taatattacattggtattgtaaaacgacatataatttggaacaaatttttttccgaagcgacatacaatttgggacggagggagta 45439513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 330
Target Start/End: Original strand, 2099167 - 2099249
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaat 330  Q
    ||||||||||| ||| |||| |||||||||||||||| |||||||| |||| | |||||| | ||||||||| ||||||||||    
T  2099167 cattgatattgtaaagcgacatataatttgggacaaatattttttctaaaatgacatacaatttgggacggaaggagtaaaat 2099249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 241 - 329
Target Start/End: Original strand, 7427365 - 7427454
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||||| |||||||||||||||||||    
T  7427365 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacattttgggacggagggagtaaaa 7427454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 250 - 319
Target Start/End: Complemental strand, 43564662 - 43564593
Alignment:
Q  250 attgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacgga 319  Q
    |||||||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | |||||||||    
T  43564662 attgatattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacgga 43564593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 31602917 - 31602996
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  31602917 cattggtattgtaaaacgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 31602996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 39628920 - 39628841
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  39628920 cattgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 39628841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 39638470 - 39638391
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  39638470 cattgatattgtaaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 39638391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 9267998 - 9268084
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  9267998 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacagtttgggacggagggagta 9268084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 26805028 - 26805106
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc-aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||||| ||| ||||| || |||||| |||||| | ||||||||||||||||    
T  26805028 cattgatattgtaaagcgacatataatttgggataaattttttccctaaaacgacatacaatttgggacggagggagta 26805106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 29938376 - 29938290
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| |||||||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  29938376 taatttttcattggtattgtaaaacgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 29938290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 31873615 - 31873701
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  31873615 taatttttcattggtattgtaaagcgacgtataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 31873701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 32395232 - 32395318
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| || ||||| ||||||| |||||||| |||  | |||||||| ||||||||||||||||    
T  32395232 taatttttcattgatattgtaaagcgacatacaatttaggacaaatattttttctaaagtgacatacattttgggacggagggagta 32395318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 5831028 - 5830941
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  5831028 taatttttcattggtattgtaaagcgacataaaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 5830941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 6878598 - 6878511
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| |||||||| || |||||||||||||  ||||||| |||  | |||||| | |||||||||||||||||    
T  6878598 taatttttcattggtattgtaaaacgacatacaatttgggacaaatgttttttctaaagtgacatacaatttgggacggagggagtaa 6878511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 24422505 - 24422592
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||| | | |||||||||||||||||    
T  24422505 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatataatttgggacggagggagtaa 24422592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 323
Target Start/End: Complemental strand, 28849034 - 28848959
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggaggga 323  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | |||||||||||||    
T  28849034 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggaggga 28848959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 30087923 - 30088010
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | | |||| | |||||||||||||||||    
T  30087923 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacgtacaatttgggacggagggagtaa 30088010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 30526243 - 30526156
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||| | | |||||||||||||||    
T  30526243 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacaatttaggacggagggagtaa 30526156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 1953350 - 1953272
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||||||  ||||| | |||||| |||||||||    
T  1953350 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaaacgatatacaatttgggacagagggagta 1953272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 11714524 - 11714438
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||| ||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  11714524 taatttttcattggtattgtaaagcgacatacaatttaggacaaatattttttctaaaatgacatacaatttgggacggagggagta 11714438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 14433344 - 14433430
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| || || ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  14433344 taatttttcactggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 14433430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 16861952 - 16862030
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| |  |||||| | ||||||||||||||||    
T  16861952 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcaacatacaatttgggacggagggagta 16862030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 29342784 - 29342706
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| | ||| || |||||| | ||||||||||||||||    
T  29342784 cattggtattgtaaagcgacatataatttgggacaaatatttttcctaaagcgacatacaatttgggacggagggagta 29342706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 29440942 - 29440864
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| || ||||| ||||||| |||||| |||||||| |||||| | ||||||||||||||||    
T  29440942 cattggtattgtaaagcgacatacaatttaggacaaattttttttccaaaacgacatacaatttgggacggagggagta 29440864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 31231070 - 31231156
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||  | |||||| | | ||||||||||||||    
T  31231070 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaagtgacatacaattttggacggagggagta 31231156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 35544188 - 35544274
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  35544188 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagta 35544274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 38044992 - 38044914
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||| ||||||| |||||| |||||||| |||||| | | ||||||||||||||    
T  38044992 cattggtattgtaaagcgacatataatttaggacaaattttttttccaaaacgacatacaatttaggacggagggagta 38044914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 38194670 - 38194748
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||| ||||||| |||| ||||||| || |||||| | ||||||||||||||||    
T  38194670 cattggtattgtaaagcgacatataatttaggacaaattttttttccaaagcgacatacaatttgggacggagggagta 38194748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 41256404 - 41256482
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| |||||||| ||||||| |||| |||||||||| |||||| | | ||||||| ||||||    
T  41256404 cattggtattgtaaaacgacatataatttaggacaaattttttttccaaaacgacatacaatttaggacggatggagta 41256482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 899558 - 899639
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagg 321  Q
    ||||||| ||||| || || |||||||| |||||||||||||||| |||||||| ||| || |||||| | | |||||||||    
T  899558 taatttttcattggtactgtaaaacgacatataatttgggacaaatattttttctaaagcgacatacaatttaggacggagg 899639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 326
Target Start/End: Complemental strand, 16861779 - 16861746
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||||||||| ||||||||||||||||    
T  16861779 ccaaaacgtcatacattttgggacggagggagta 16861746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 26513766 - 26513689
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||  ||| |||||||||||||||| |||||| |||| || |||||| | | ||||||||||||||    
T  26513766 cattggtattgtaaagtgacatataatttgggacaaattttttttcaaagcgacatacaatttaggacggagggagta 26513689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 28868799 - 28868722
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| | |||   |||||| | ||||||||||||||||    
T  28868799 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcacatacaatttgggacggagggagta 28868722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Complemental strand, 31230510 - 31230473
Alignment:
Q  292 tccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    |||||||||||||||| | |||||||||||||||||||    
T  31230510 tccaaaacgtcatacaatttgggacggagggagtaaaa 31230473  T

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Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 329
Target Start/End: Complemental strand, 35631105 - 35631024
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||||||  |||  ||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||||    
T  35631105 cattgatattctaaagtgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaaaa 35631024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 292 - 328
Target Start/End: Complemental strand, 543604 - 543568
Alignment:
Q  292 tccaaaacgtcatacattgtgggacggagggagtaaa 328  Q
    |||||||||||||||| | ||||||||||||||||||    
T  543604 tccaaaacgtcatacaatttgggacggagggagtaaa 543568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 11181321 - 11181242
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||| | ||| |||| |||||||||||||||  |||||| |  |||||| |||||| | ||||||||||||||||    
T  11181321 cattgatatcgtaaagcgacatataatttgggacaatttttttttcctaaaacgacatacaatttgggacggagggagta 11181242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 326
Target Start/End: Complemental strand, 18526405 - 18526333
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||| |||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  18526405 tattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 18526333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 26394023 - 26394102
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||| |||| ||  ||| || |||||| | ||||||||||||||||    
T  26394023 cattggtattgtaaagcgacatataatttgggacaaaaattttcccctaaagcgacatacaatttgggacggagggagta 26394102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 39284282 - 39284194
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 328  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||| ||| |||||||| |||  | |||||| | ||||||||||||||||||    
T  39284282 taatttttcattggtattgtaaagcgacatacaatttgggataaatattttttctaaagtgacatacaatttgggacggagggagtaaa 39284194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 1e-55; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 335 - 487
Target Start/End: Original strand, 23973362 - 23973516
Alignment:
Q  335 caacagtgtaatgaaac-gggtaaaaaagtgagagtgtggtaaaaaactcaggattctcccatttcaaattttattaccacgttacccttcaataaagcg 433  Q
    ||||||||||||||||  ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| |    
T  23973362 caacagtgtaatgaaaaagggtaaaaaagtgagagtgcggtaaaaaactcagggttctcccatttcaaattttattaccacattacccttcaataaagtg 23973461  T
Q  434 aaattaaagtgcagttaaaaaa-gtagaagcagggacagttgtgccattttgaca 487  Q
    ||||||||||| |||||||||| |||||||||||||||||||||| |||||||||    
T  23973462 aaattaaagtgtagttaaaaaaggtagaagcagggacagttgtgcaattttgaca 23973516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 539 - 625
Target Start/End: Original strand, 23973608 - 23973694
Alignment:
Q  539 ttaaaatacctcaaacattttgcccgttacatacatttgtacacacacaattcaaagctgacagacacacactttctatttcatctc 625  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23973608 ttaaaatacctcaaacattttgcccgttacatacattcgtacacacacaatttaaagctgacagacacacactttctatttcatctc 23973694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 40483605 - 40483676
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| |||||||| |||||||||||||||| ||||||||||| || | |||| | ||||||||||||||||    
T  40483605 tattgtaaaacgacatataatttgggacaaatttttttccaaagcgacgtacaatttgggacggagggagta 40483676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 37985601 - 37985524
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||| ||||||| ||||||||||| || |||||| | ||||||||||||||||    
T  37985601 cattggtattgtaaagcgacatataatttaggacaaatttttttccaaagcgacatacaatttgggacggagggagta 37985524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 241 - 328
Target Start/End: Complemental strand, 30780142 - 30780054
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 328  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||| |||||||  |||  | |||||| | ||||||||||||||||||    
T  30780142 taatttttcattgatattgtaaagcgacatataatttgggacaaatattttttgtaaagtgacatacaatttgggacggagggagtaaa 30780054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 249 - 329
Target Start/End: Complemental strand, 43446611 - 43446531
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||| ||||| ||| |||| ||||||||| |||||| ||||||||||| || |||||| | || ||||||||||||||||    
T  43446611 cattggtattgtaaagcgacatataatttgagacaaatttttttccaaagcgacatacaatttgagacggagggagtaaaa 43446531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 292
Target Start/End: Complemental strand, 28248535 - 28248492
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt 292  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  28248535 cattgatattgtaaaacgacatataatttgggacaaaatttttt 28248492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 38959813 - 38959734
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| |||||||||||||||| |||||| ||||| || |||||| | |||||||||||||||||    
T  38959813 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagtaa 38959734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 325327 - 325413
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  325327 taatttttcattgatattgtaaagcgacatataatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagta 325413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 5421511 - 5421433
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| || ||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  5421511 cattggtattgtaaaacgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 5421433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 14309108 - 14309186
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| ||||||||||||||||  ||||||| ||| || |||||| | ||||||||||||||||    
T  14309108 cattggtattgtaaaacgacatataatttgggacaaattttttttctaaagcgacatacaatttgggacggagggagta 14309186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 22154216 - 22154294
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  22154216 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 22154294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 524
Target Start/End: Original strand, 23973550 - 23973592
Alignment:
Q  482 ttgacaacggaaagtataataagaaattaaaatatctattgtc 524  Q
    |||||||||||||||||||||||||||||||||| || |||||    
T  23973550 ttgacaacggaaagtataataagaaattaaaataccttttgtc 23973592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 27863004 - 27863082
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  27863004 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 27863082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 43521597 - 43521675
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| |||||||| ||||||  ||||||||||| || |||||| | |||||||||||||||||    
T  43521597 cattggtattgtaaagcgacatataatttaggacaattttttttccaaagcgacatacaatttgggacggagggagtaa 43521675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 322
Target Start/End: Original strand, 14780906 - 14780979
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggaggg 322  Q
    ||||| ||||| |||  ||| |||||||||||||||| |||||||||||||| |||||| | ||||| ||||||    
T  14780906 cattggtattgtaaagggacatataatttgggacaaatttttttccaaaacgacatacaatttgggatggaggg 14780979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 40649129 - 40649052
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| || ||||||||||||  ||||||||||| || |||||| | || |||||||||||||    
T  40649129 cattggtattgtaaaacgacatacaatttgggacaattttttttccaaagcgacatacaatttgagacggagggagta 40649052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 3873614 - 3873696
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||| ||||| ||| |||| ||||||||||||||||  |||||||  ||| || |||||| | |||||||||||||||||||    
T  3873614 cattggtattgtaaagcgacatataatttgggacaaatatttttccctaaagcgacatacaatttgggacggagggagtaaaa 3873696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 28786919 - 28787006
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    |||||||  |||||||||| ||| |||| |||||||| ||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  28786919 taattttttattgatattgtaaagcgacatataatttaggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 28787006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 329
Target Start/End: Original strand, 32068419 - 32068501
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaa--ttttttccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||| ||||| ||| |||| |||||||| ||||||||  |||||| |||| || |||||| | |||||||||||||||||||    
T  32068419 cattggtattgtaaagcgacatataattttggacaaaatttttttttcaaagcgacatacaatttgggacggagggagtaaaa 32068501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 7491649 - 7491735
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||  |||| ||||| ||| |||| |||||||||||||| | |||||||| |||| | |||||| | ||||||||||||||||    
T  7491649 taattttttattggtattgtaaagcgacatataatttgggacacatattttttctaaaatgacatacaatttgggacggagggagta 7491735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 11216670 - 11216592
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  11216670 cattggtattgtaaagcgacgtataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 11216592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 16198470 - 16198392
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||| ||| |||||| ||||| || |||||| | ||||||||||||||||    
T  16198470 cattggtattgtaaagcgacatataatttgggataaattttttttccaaagcgacatacaatttgggacggagggagta 16198392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 19576132 - 19576046
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||| |||||||| |||| | |||||| | |  |||||||||||||    
T  19576132 taatttttcattggtattgtaaagcgacatataatttgggacaaatattttttctaaaatgacatacaatttaagacggagggagta 19576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 23498099 - 23498037
Alignment:
Q  265 cgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    |||| |||||||||||||||| |||||||| |||  | |||||||| ||||||||||||||||    
T  23498099 cgacatataatttgggacaaatattttttctaaagtgacatacattttgggacggagggagta 23498037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 30549773 - 30549851
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||| ||||  |||| |||||||||| |||||| |  |||||||||||||||    
T  30549773 cattgatattgtaaagcgacatataatttggaacaatttttttttccaaaacgacatacaattggggacggagggagta 30549851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 37111205 - 37111283
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| |||||||| | ||||||| |||||  |||||| ||||| || |||||| | ||||||||||||||||    
T  37111205 cattgatattgtaaaacgacatgtaatttgagacaattttttttcccaaagcgacatacaatttgggacggagggagta 37111283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 1666962 - 1667042
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| || | |||||||||||||||| ||||||||  ||| || |||||| | |||||||||||||||||    
T  1666962 cattggtattgtaaagcggcatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtaa 1667042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 329
Target Start/End: Complemental strand, 34504419 - 34504338
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||| ||||| ||| |||| |||||||| ||||||| |||||| ||||| || |||||| | || ||||||||||||||||    
T  34504419 cattggtattgtaaagcgacatataatttaggacaaattttttttccaaagcgacatacaatttgagacggagggagtaaaa 34504338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 36845896 - 36845820
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||| ||||| || |||||| | ||||||||||||||||    
T  36845896 cattggtattgtaaagcgacatataatttgggacaat-tttttcccaaagcgacatacaatttgggacggagggagta 36845820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 40425188 - 40425248
Alignment:
Q  273 aatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagtaaaatg 331  Q
    ||||||||||||| ||||||||  ||| || |||||| | |||||||||||||||||||||    
T  40425188 aatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagtaaaatg 40425248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 329
Target Start/End: Complemental strand, 3376463 - 3376427
Alignment:
Q  293 ccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    ||||||||||||||| | |||||||||||||||||||    
T  3376463 ccaaaacgtcatacaatttgggacggagggagtaaaa 3376427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 326
Target Start/End: Original strand, 8444207 - 8444279
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaaatt-ttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||| |||| |||||||||||||||| || ||||||||| |  |||||| | ||||||||||||||||    
T  8444207 tattgtaaagcgacatataatttgggacaaatttattttccaaagcaacatacaatttgggacggagggagta 8444279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 255 - 319
Target Start/End: Original strand, 19505842 - 19505906
Alignment:
Q  255 tattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacgga 319  Q
    ||||| |||||||| || ||||||||||||| |||||| |||| || |||||| | |||||||||    
T  19505842 tattgtaaaacgacatacaatttgggacaaattttttttcaaagcgacatacaatttgggacgga 19505906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 330 - 477
Target Start/End: Complemental strand, 125715 - 125567
Alignment:
Q  330 tgaatcaacagtgtaatgaaacgggtaaaaaagtgagagtgtggtaaaaaa-ctcaggattctcccatttcaaattttattaccacgttacccttcaata 428  Q
    |||||||| |||||||||||| || || ||| || | |||||||||||||| |||||| |||| ||||||||||||||||||||| |||| |||||||||    
T  125715 tgaatcaatagtgtaatgaaaaggttagaaatgtcacagtgtggtaaaaaaactcagggttcttccatttcaaattttattaccatgttatccttcaata 125616  T
Q  429 aagcgaaattaaagtgcagttaaaaaagtagaagcagggacagttgtgc 477  Q
    ||| ||| ||| |||||||||||||| ||||||||||||||||||||||    
T  125615 aagtgaacttacagtgcagttaaaaatgtagaagcagggacagttgtgc 125567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 5e-30; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 325 - 476
Target Start/End: Complemental strand, 16208074 - 16207923
Alignment:
Q  325 taaaatgaatcaacagtgtaatgaaacgggtaaaaaagtgagagtgtggtaaaaaactcaggattctcccatttcaaattttattaccacgttacccttc 424  Q
    |||| |||||||||| |||||| ||  ||||| |||||| ||||||||||||||||||||||| |||||||||| ||| ||| ||||||  |||||||||    
T  16208074 taaattgaatcaacaatgtaataaagagggtagaaaagtcagagtgtggtaaaaaactcaggagtctcccatttgaaaatttgttaccatcttacccttc 16207975  T
Q  425 aataaagcgaaattaaagtgcagttaaaaaagtagaagcagggacagttgtg 476  Q
    ||||||| |||| || ||||||||||||||  |||  ||| |||||||||||    
T  16207974 aataaagtgaaaatagagtgcagttaaaaatttagtggcatggacagttgtg 16207923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 9961401 - 9961314
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| |||||||| |||||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  9961401 taatttttcattggtattgtaaaacgacatataatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 9961314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 34283421 - 34283343
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||||||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  34283421 cattggtattgtaaagcgacttataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 34283343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 2010272 - 2010350
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttt-tccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| | || |||||||||||||||||||||| |||||| || |||||| | ||||||||||||||||    
T  2010272 cattggtattgtaaagcaacatataatttgggacaaaatttttctccaaagcgacatacaatttgggacggagggagta 2010350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 10629520 - 10629598
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  10629520 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 10629598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 16524721 - 16524799
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| ||||||||||||||||  ||||||||||| || |||||| | ||||||||||||||||    
T  16524721 cattggtattgtaaagcgacatataatttgggacaaattttttttccaaagcgacatacaatttgggacggagggagta 16524799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 331
Target Start/End: Original strand, 31022590 - 31022672
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaaaatg 331  Q
    ||||| ||||| ||| |||| |||||||| ||||||| ||||||||||| || |||||| | | |||||||||||||| ||||    
T  31022590 cattggtattgtaaagcgacatataatttaggacaaatttttttccaaagcgacatacaatttaggacggagggagtataatg 31022672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 31949336 - 31949422
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| |||||||| || ||||||||||||| |||||||| |||  | |||||||| |||||||||| |||||    
T  31949336 taatttttcattggtattgtaaaacgacatacaatttgggacaaatattttttctaaagtgacatacattttgggacggagagagta 31949422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 32142461 - 32142375
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||| | ||||||||||||||||    
T  32142461 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacaatttgggacggagggagta 32142375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 326
Target Start/End: Complemental strand, 29344038 - 29343975
Alignment:
Q  265 cgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    |||| |||||||||||||||| ||||||||  |||||| |||||| | ||||||||||||||||    
T  29344038 cgacatataatttgggacaaatttttttccttaaaacgacatacaatttgggacggagggagta 29343975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 11172971 - 11172884
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||  | |||||| | |||||||||||||||||    
T  11172971 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaagtgacatacaatttgggacggagggagtaa 11172884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 328
Target Start/End: Complemental strand, 12058646 - 12058567
Alignment:
Q  250 attgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagtaaa 328  Q
    |||| ||||| ||| |||| |||||||||||||||| |||||||| ||| || |||||| | ||||||||||||| ||||    
T  12058646 attggtattgtaaagcgacatataatttgggacaaatattttttctaaagcgacatacaatttgggacggagggattaaa 12058567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 8201546 - 8201460
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| ||||||||| |||||| |||||||| |||  | |||||| | ||||||||||||||||    
T  8201546 taatttttcattggtattgtaaagcgacatataatttgagacaaatattttttctaaagtgacatacaatttgggacggagggagta 8201460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 16466365 - 16466443
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaa-aattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| ||||||||||||||||||||   ||||||||||| || |||||| | | ||||||||||||||    
T  16466365 cattggtattgtaaagcgacttataatttgggacaatttttttttccaaagcggcatacaatttaggacggagggagta 16466443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 4130930 - 4130853
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| |||||||| || ||||||||||||| |||||| |||| || |||||| | |||||| ||| |||||    
T  4130930 cattggtattgtaaaacgacatacaatttgggacaaattttttttcaaagcgacatacaatttgggacagagagagta 4130853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 329
Target Start/End: Original strand, 6612625 - 6612662
Alignment:
Q  292 tccaaaacgtcatacattgtgggacggagggagtaaaa 329  Q
    |||||||||||||||| | |||||||||||||||||||    
T  6612625 tccaaaacgtcatacaatttgggacggagggagtaaaa 6612662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 24053149 - 24053226
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||| ||  |||||| |||| || |||||| | ||||||||||||||||    
T  24053149 cattggtattgtaaagcgacatataatttgggataatttttttttcaaagcgacatacaatttgggacggagggagta 24053226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 9461660 - 9461573
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaa--aattttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| |||||||||||||||  | ||||||| |||  | |||||| | ||||||||||||||||    
T  9461660 taatttttcattgttattgtaaagcgacatataatttgggacaaatatttttttctaaagtgacatacaatttgggacggagggagta 9461573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 24430227 - 24430148
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||  |||||| |||| | | ||||||| ||||||||    
T  24430227 cattggtattgtaaagcgacatataatttgggacaaatttttttccctaaaacgacatataatttgggacgaagggagta 24430148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 8514 - 8436
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| |||| |||||||||||||||| ||||||||||| || |||||| | |||||||||||||||||    
T  8514 cattggtattgtaaagcgacatataatttgggacaaatttttttccaaagcgacatacaatttgggacggagggagtaa 8436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Original strand, 18388 - 18474
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||||||||| ||| |||| |||||||||||||||| ||||||||||||  | |||| | | ||||||||||||||||    
T  18388 taatttttcattgatattgtaaagcgacatataatttgggacaaatattttttccaaagtgacatataatttgggacggagggagta 18474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 241 - 326
Target Start/End: Complemental strand, 63430 - 63344
Alignment:
Q  241 taattttacattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||| ||||| ||||| ||| |||| || ||||||||||||| |||||||| |||| | |||||||| ||||||||||||||||    
T  63430 taatttttcattggtattgtaaagcgacatacaatttgggacaaatattttttctaaaatgacatacattttgggacggagggagta 63344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 249 - 327
Target Start/End: Complemental strand, 7673 - 7594
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttttt-ccaaaacgtcatacattgtgggacggagggagtaa 327  Q
    ||||| ||||| ||| ||||||||||||||||||||  |||||| ||||| || |||||| | |||||||||||||||||    
T  7673 cattggtattgtaaagcgacttataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagtaa 7594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 17536 - 17458
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||||||||||||||||||||  |||||| |||| || |||||| | ||||||||||||||||    
T  17536 cattggtattgtaaagcgacttataatttgggacaaatttttttttcaaagcgacatacaatttgggacggagggagta 17458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 1273 - 1352
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaattttttcc--aaaacgtcatacattgtgggacggagggagta 326  Q
    |||||||||||  || |||| |||||||||||||||| ||||||||  ||| || |||||| | ||||||||||||||||    
T  1273 cattgatattgtgaagcgacatataatttgggacaaatttttttccctaaagcgacatacaatttgggacggagggagta 1352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 151718 - 151639
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaa-attttttcc-aaaacgtcatacattgtgggacggagggagta 326  Q
    ||||||||||| ||| |||| |||||||||||||||| ||||| ||| ||| || |||||| | ||||||||||||||||    
T  151718 cattgatattgtaaagcgacatataatttgggacaaatattttctcctaaagcgacatacaatttgggacggagggagta 151639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 23551 - 23629
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt-ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  |||| ||||||| || |||||| | ||||||||||||||||    
T  23551 cattggtattgtaaagcgacatataatttgggacaatttttttttccaaagcgacatacaatttgggacggagggagta 23629  T

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Target: scaffold0459 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 11699 - 11778
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt--ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||  ||||||| || |||||| | ||||||||||||||||    
T  11699 cattggtattgtaaagcgacatataatttgggacaattttttttttccaaagcgacatacaatttgggacggagggagta 11778  T

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Target: scaffold0366 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 249 - 326
Target Start/End: Original strand, 13006 - 13085
Alignment:
Q  249 cattgatattgcaaaacgacttataatttgggacaaaatttt--ttccaaaacgtcatacattgtgggacggagggagta 326  Q
    ||||| ||||| ||| |||| |||||||||||||||  ||||  ||||||| || |||||| | ||||||||||||||||    
T  13006 cattggtattgtaaagcgacatataatttgggacaattttttttttccaaagcgacatacaatttgggacggagggagta 13085  T

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