View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11168_high_23 (Length: 407)
Name: NF11168_high_23
Description: NF11168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11168_high_23 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 62; Significance: 1e-26; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 297 - 358
Target Start/End: Original strand, 17094669 - 17094730
Alignment:
| Q |
297 |
actgattttcttcccaattgacttcaactccaacgagatttgttgttgctttcaaactgatt |
358 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17094669 |
actgattttcttcccaattgacttcaactccaacgagatttgttgttgctttcaaactgatt |
17094730 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 17094144 - 17094196
Alignment:
| Q |
210 |
atcatttattctcacaaatcacaatacctccttcaactcccattgcttatgca |
262 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17094144 |
atcatttattctcacaaatcacaatacctccttcaactcccattgcttatgca |
17094196 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 190
Target Start/End: Original strand, 13109730 - 13109812
Alignment:
| Q |
108 |
atagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattag |
190 |
Q |
| |
|
|||||||| ||||| || ||| ||||| ||||||||||||| | | ||||||||| ||||||||| |||||||||| |||| |
|
|
| T |
13109730 |
atagaaaatgataagtttaacatatttctaatcatatcctatccaccctttgttatttttatccttagtttttggtgggttag |
13109812 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 41482505 - 41482428
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| | ||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
41482505 |
gataacttaaacctatttttaatcatatcctactcaccctttgttatttttatccttagtttttggtgggttagcaac |
41482428 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 10026467 - 10026540
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattag |
190 |
Q |
| |
|
||||| || ||||||||| ||||||||||| ||||||| ||||||||| ||||||||| ||||||||||||||| |
|
|
| T |
10026467 |
gataagtttaacctatttctaatcatatcccactcctcctttgttattcttatccttagtttttggtggattag |
10026540 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 97 - 194
Target Start/End: Original strand, 24429700 - 24429797
Alignment:
| Q |
97 |
ttgatgtatcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
|||||| | |||||||||| ||||||||||| |||||| ||||| |||| ||||| | ||||||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
24429700 |
ttgatgcaccaatagaaaatgataatttaaaactatttataatcctatcttactcaccctttgttatttttatccttagtttttggtgggttagcaac |
24429797 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 45884726 - 45884662
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttgg |
182 |
Q |
| |
|
||||||||||| | |||||||||||||||||||||||| ||||||||| ||||||| | ||||||| |
|
|
| T |
45884726 |
gataatttaaaaccatttttaatcatatcctactcctc-tttgttatttttatcctaagtttttgg |
45884662 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 2334071 - 2334018
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatc |
170 |
Q |
| |
|
||||| |||||||||||||||||| ||||||| || ||||||||||| ||||| |
|
|
| T |
2334071 |
gataacttaaacctatttttaatcctatcctattcaccttttgttatttttatc |
2334018 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 109 - 185
Target Start/End: Complemental strand, 45980549 - 45980473
Alignment:
| Q |
109 |
tagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtgg |
185 |
Q |
| |
|
||||||||||||| |||||| ||||||||| |||| | || || ||||||||| ||||||||| |||||||||| |
|
|
| T |
45980549 |
tagaaaaagataacttaaactcatttttaattctatcttgttcgtcctttgttatttttatccttactttttggtgg |
45980473 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 45; Significance: 2e-16; HSPs: 7)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 117 - 193
Target Start/End: Complemental strand, 1529763 - 1529687
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaa |
193 |
Q |
| |
|
||||| || ||| ||||||||||||||||||||||||| |||||| || |||||||| ||||||||||| ||||||| |
|
|
| T |
1529763 |
gataagtttaacttatttttaatcatatcctactcctcctttgttgttcttatccttgatttttggtgggttagcaa |
1529687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 18665190 - 18665263
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattag |
190 |
Q |
| |
|
||||| |||||||||||| |||| ||||| ||||| | ||||||| | |||||||||||||||||||| |||| |
|
|
| T |
18665190 |
gataacttaaacctatttctaataatatcttactcaccctttgttaattttatccttaatttttggtgggttag |
18665263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 114 - 183
Target Start/End: Complemental strand, 39108765 - 39108696
Alignment:
| Q |
114 |
aaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggt |
183 |
Q |
| |
|
|||||||| |||||| ||||||||||| ||| |||||| ||||||| ||| |||||| ||||||||||| |
|
|
| T |
39108765 |
aaagataaattaaacatatttttaatcttattctactcaccttttgtaatttttatccataatttttggt |
39108696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 190
Target Start/End: Original strand, 7670396 - 7670480
Alignment:
| Q |
106 |
caatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattag |
190 |
Q |
| |
|
|||||||||| ||||| || ||||| ||| ||||| ||||||| | ||||||| ||| |||||||||||||||||||| |||| |
|
|
| T |
7670396 |
caatagaaaatgataagtttaacctgtttctaatcctatcctattgagcttttgtaattcttatccttaatttttggtgggttag |
7670480 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 194
Target Start/End: Original strand, 40626488 - 40626576
Alignment:
| Q |
106 |
caatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
|||||| ||| ||||||||||| ||||| ||||| |||||||||| | ||| ||||| |||||||||| ||||||||| ||| |||| |
|
|
| T |
40626488 |
caataggaaaggataatttaaatatatttctaatcctatcctactcaccctttattatttttatccttaaattttggtgggttaacaac |
40626576 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 185
Target Start/End: Original strand, 6457598 - 6457696
Alignment:
| Q |
87 |
aatctattgtttgatgtatcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtgg |
185 |
Q |
| |
|
||||| ||||||| || | |||||||||| ||||| ||||| | |||| ||||||||| || | | ||||||||| |||||||||||||||||||| |
|
|
| T |
6457598 |
aatctgttgtttggtgcaccaatagaaaatgataaattaaatcaatttccaatcatatcttatccaccctttgttatttttatccttaatttttggtgg |
6457696 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 179
Target Start/End: Complemental strand, 39111731 - 39111666
Alignment:
| Q |
114 |
aaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttt |
179 |
Q |
| |
|
||||| || |||||| ||||||||||| |||||||| | | ||||||||| |||||||||||||| |
|
|
| T |
39111731 |
aaagacaaattaaacatatttttaatcgtatcctacacaccctttgttatttttatccttaatttt |
39111666 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 44; Significance: 6e-16; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 96 - 183
Target Start/End: Original strand, 11066492 - 11066579
Alignment:
| Q |
96 |
tttgatgtatcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggt |
183 |
Q |
| |
|
|||| ||| ||||||| ||| ||||| |||||||||||| ||||| |||||||||| | ||||||||| |||||||||||||||||| |
|
|
| T |
11066492 |
tttggtgtgtcaataggaaaggataacttaaacctatttctaatcctatcctactcagcctttgttatttttatccttaatttttggt |
11066579 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 106 - 148
Target Start/End: Original strand, 556798 - 556840
Alignment:
| Q |
106 |
caatagaaaaagataatttaaacctatttttaatcatatccta |
148 |
Q |
| |
|
|||||||||| ||||| |||||||||||| ||||||||||||| |
|
|
| T |
556798 |
caatagaaaatgataaattaaacctatttctaatcatatccta |
556840 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 9028724 - 9028642
Alignment:
| Q |
112 |
aaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
|||| |||||||||||||||||||||||| ||||||| | | ||||| ||| |||||||| |||||| ||| |||||||| |
|
|
| T |
9028724 |
aaaaggataatttaaacctatttttaatcctatcctattgaacctttgtaattcttatccttggtttttgatgggttagcaac |
9028642 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 7547887 - 7547960
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattag |
190 |
Q |
| |
|
||||| || ||||||||||| ||| ||||| ||| ||| |||| |||| ||||||||| |||||||||| |||| |
|
|
| T |
7547887 |
gataagtttaacctattttttatcctatcccacttctcctttgatattattatccttagtttttggtgggttag |
7547960 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 74 - 194
Target Start/End: Original strand, 39283694 - 39283814
Alignment:
| Q |
74 |
catattctgagttaatctattgtttgatgtatcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatcctt |
173 |
Q |
| |
|
||||| |||||| |||| ||||||||||| | ||| | |||| ||||| ||||||| |||| |||| |||| || || | ||| || || ||||| || |
|
|
| T |
39283694 |
catatcctgagtcaatccattgtttgatgcaccaacataaaaggataaattaaaccatttttcaatcctatcatattcaccctttattttttttatcttt |
39283793 |
T |
 |
| Q |
174 |
aatttttggtggattagcaac |
194 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
39283794 |
aatttttggtgggttagcaac |
39283814 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 19181498 - 19181421
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
||||| |||||||||||| ||||| |||||||||| || ||| ||||| || |||||| ||||||||||||||||||| |
|
|
| T |
19181498 |
gataaattaaacctatttctaatcctatcctactcatcctttattatttttgtccttagtttttggtggattagcaac |
19181421 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 117 - 185
Target Start/End: Original strand, 22202956 - 22203024
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtgg |
185 |
Q |
| |
|
||||| || ||||||||||||||| |||||||| |||||||||||||| | |||||| | ||||||||| |
|
|
| T |
22202956 |
gataagtttaacctatttttaatcctatcctacccctcttttgttattttaatcctttacttttggtgg |
22203024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 93 - 194
Target Start/End: Original strand, 2183301 - 2183402
Alignment:
| Q |
93 |
ttgtttgatgtatcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagca |
192 |
Q |
| |
|
||||||| || | |||||||||| ||||| |||||| |||| |||| ||||||| | | ||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
2183301 |
ttgtttggtgcaccaatagaaaaggataaattaaactcatttccaatcctatcctatccaacctttgttatttttatccttaatttttggtgggttagca |
2183400 |
T |
 |
| Q |
193 |
ac |
194 |
Q |
| |
|
|| |
|
|
| T |
2183401 |
ac |
2183402 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 117 - 194
Target Start/End: Complemental strand, 26635346 - 26635269
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
||||| || ||||||||| ||| ||||||||||||| ||| ||||| ||||||||| |||||||||| |||||||| |
|
|
| T |
26635346 |
gataaatttaacctatttccaattctatcctactcctcctttattattcttatccttagtttttggtgggttagcaac |
26635269 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 34666430 - 34666516
Alignment:
| Q |
108 |
atagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
|||| ||| ||||| |||||||||||| ||||||||||||| ||| ||| ||||| |||||| ||| |||| |||| |||||||| |
|
|
| T |
34666430 |
ataggaaatgataacttaaacctatttctaatcatatcctattccctctttcttatttttatccgtaactttttgtgggttagcaac |
34666516 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 115 - 179
Target Start/End: Complemental strand, 48936388 - 48936324
Alignment:
| Q |
115 |
aagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttt |
179 |
Q |
| |
|
|||||||||||||||| ||||||||| ||||||||| ||| ||||||||| ||||||||| |||| |
|
|
| T |
48936388 |
aagataatttaaacctgtttttaatcctatcctacttctcctttgttatttttatccttagtttt |
48936324 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 48936188 - 48936130
Alignment:
| Q |
300 |
gattttcttcccaattgacttcaactccaacgagatttgttgttgctttcaaactgatt |
358 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||| ||| ||||||||||||||| |||||| |
|
|
| T |
48936188 |
gattttcttcccaattgatttccactccaacgtgatctgttgttgctttcaacctgatt |
48936130 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 117 - 201
Target Start/End: Original strand, 38457767 - 38457851
Alignment:
| Q |
117 |
gataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaacgtgacaa |
201 |
Q |
| |
|
|||||||||||| |||| ||||| ||||||| || ||||||||| | ||||||||| | |||||||| |||||||| |||||| |
|
|
| T |
38457767 |
gataatttaaactcatttctaatcctatcctattcaccttttgttacttttatccttagtatttggtgggttagcaacatgacaa |
38457851 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 106 - 190
Target Start/End: Complemental strand, 50004992 - 50004908
Alignment:
| Q |
106 |
caatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattag |
190 |
Q |
| |
|
||||| |||| |||||||||||||||||| ||||| ||||||| || | ||||||||| ||||||||| |||||||||| |||| |
|
|
| T |
50004992 |
caataaaaaaggataatttaaacctatttctaatcctatcctaatcaccctttgttatttttatccttagtttttggtgggttag |
50004908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 194
Target Start/End: Complemental strand, 9383342 - 9383235
Alignment:
| Q |
87 |
aatctattgtttgatgtatcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtgga |
186 |
Q |
| |
|
|||| |||||||| || | |||||| || ||||| ||||||| |||| ||||| |||||||||| | ||||||||| | |||||||||||||| ||| |
|
|
| T |
9383342 |
aatccattgtttggtgcaccaataggaacggataaattaaaccaatttctaatcttatcctactcaccctttgttattttcatccttaatttttgatggg |
9383243 |
T |
 |
| Q |
187 |
ttagcaac |
194 |
Q |
| |
|
|||||||| |
|
|
| T |
9383242 |
ttagcaac |
9383235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 190
Target Start/End: Original strand, 4950198 - 4950293
Alignment:
| Q |
94 |
tgtttgatgtatcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattag |
190 |
Q |
| |
|
|||||| || |||||||||||| |||||||||||| ||||| |||||||||||| | | ||||||||| |||||| || |||||||||| |||| |
|
|
| T |
4950198 |
tgtttggtgcatcaatagaaaatgataatttaaactcattttcaatcatatcctatttaccctttgttatttttatcc-tagtttttggtgggttag |
4950293 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 85 - 190
Target Start/End: Complemental strand, 4076463 - 4076358
Alignment:
| Q |
85 |
ttaatctattgtttgatgtatcaatagaaaaagataatttaaacctatttttaatcatatcctactc-ctcttttgttattgttatccttaatttttggt |
183 |
Q |
| |
|
||||||| |||||| || |||||||| ||| ||||| ||||||||||| ||||| ||||||| || ||| |||||| || | ||||||| |||||||| |
|
|
| T |
4076463 |
ttaatctggtgtttggtgcatcaataggaaaggataaattaaacctattactaatcctatcctattcactc-tttgtttttctaatccttagtttttggt |
4076365 |
T |
 |
| Q |
184 |
ggattag |
190 |
Q |
| |
|
||||||| |
|
|
| T |
4076364 |
ggattag |
4076358 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 8547533 - 8547443
Alignment:
| Q |
104 |
atcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
|||||||| ||| ||||| |||||||||||| ||||| |||| || || | ||||||||| |||| |||| |||||||||| |||||||| |
|
|
| T |
8547533 |
atcaataggaaaggataacttaaacctatttctaatcttatcatattcaccctttgttatttttatacttagtttttggtgggttagcaac |
8547443 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 8573886 - 8573796
Alignment:
| Q |
104 |
atcaatagaaaaagataatttaaacctatttttaatcatatcctactcctcttttgttattgttatccttaatttttggtggattagcaac |
194 |
Q |
| |
|
|||||||| ||| ||||| |||||||||||| ||||| |||| || || | ||||||||| |||| |||| |||||||||| |||||||| |
|
|
| T |
8573886 |
atcaataggaaatgataacttaaacctatttctaatcttatcatattcaccctttgttatttttatacttagtttttggtgggttagcaac |
8573796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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