View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11168_high_6 (Length: 602)

Name: NF11168_high_6
Description: NF11168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11168_high_6
NF11168_high_6
[»] chr2 (40 HSPs)
chr2 (19-593)||(12000307-12000880)
chr2 (280-456)||(15651251-15651427)
chr2 (214-501)||(303976-304258)
chr2 (22-176)||(12244374-12244528)
chr2 (280-400)||(17249362-17249482)
chr2 (214-456)||(25562903-25563158)
chr2 (214-376)||(17148761-17148920)
chr2 (22-176)||(14705440-14705594)
chr2 (214-456)||(41010455-41010698)
chr2 (25-176)||(12235778-12235929)
chr2 (22-176)||(7543254-7543408)
chr2 (214-332)||(13203747-13203863)
chr2 (214-332)||(6799905-6800021)
chr2 (214-332)||(18299162-18299278)
chr2 (214-332)||(41114889-41115005)
chr2 (22-176)||(12257885-12258039)
chr2 (214-376)||(33909317-33909477)
chr2 (214-332)||(22572720-22572836)
chr2 (359-456)||(13203857-13203953)
chr2 (179-329)||(29257312-29257459)
chr2 (366-499)||(29257463-29257595)
chr2 (303-385)||(16221007-16221089)
chr2 (359-499)||(6799772-6799911)
chr2 (359-456)||(41114799-41114895)
chr2 (359-456)||(18299072-18299168)
chr2 (323-400)||(45444417-45444494)
chr2 (350-396)||(34756825-34756871)
chr2 (55-148)||(16661065-16661158)
chr2 (352-396)||(35531900-35531944)
chr2 (413-456)||(2475949-2475992)
chr2 (214-264)||(27702029-27702079)
chr2 (280-332)||(15429222-15429274)
chr2 (280-332)||(34756735-34756787)
chr2 (413-456)||(17148939-17148982)
chr2 (413-456)||(22572651-22572694)
chr2 (413-456)||(33909276-33909319)
chr2 (214-272)||(2475802-2475860)
chr2 (350-388)||(42152511-42152549)
chr2 (288-328)||(29759855-29759895)
chr2 (303-335)||(42152583-42152615)
[»] chr3 (41 HSPs)
chr3 (199-495)||(33178983-33179275)
chr3 (180-400)||(53068194-53068411)
chr3 (283-376)||(41218347-41218440)
chr3 (214-332)||(53651883-53651999)
chr3 (296-376)||(41358590-41358670)
chr3 (214-332)||(44047569-44047685)
chr3 (280-332)||(26371041-26371093)
chr3 (214-332)||(28311262-28311378)
chr3 (359-495)||(7501051-7501186)
chr3 (280-332)||(7501005-7501057)
chr3 (359-503)||(28311372-28311515)
chr3 (215-332)||(37516616-37516743)
chr3 (241-328)||(53987876-53987961)
chr3 (413-499)||(41218242-41218328)
chr3 (359-498)||(12909923-12910059)
chr3 (413-497)||(26370931-26371015)
chr3 (281-328)||(35077274-35077321)
chr3 (214-332)||(14461050-14461166)
chr3 (359-497)||(14461160-14461297)
chr3 (221-368)||(47511628-47511773)
chr3 (214-332)||(25391844-25391960)
chr3 (413-498)||(37516769-37516854)
chr3 (280-332)||(38239502-38239554)
chr3 (359-455)||(43700124-43700219)
chr3 (179-332)||(12909765-12909929)
chr3 (281-328)||(26278413-26278460)
chr3 (359-495)||(53651993-53652128)
chr3 (214-272)||(7500929-7500987)
chr3 (237-328)||(9600358-9600447)
chr3 (214-269)||(43700235-43700290)
chr3 (413-456)||(53987979-53988022)
chr3 (214-272)||(41218461-41218519)
chr3 (359-456)||(44047679-44047775)
chr3 (413-498)||(26278478-26278563)
chr3 (295-330)||(43447620-43447655)
chr3 (214-269)||(44625683-44625738)
chr3 (359-400)||(25391809-25391850)
chr3 (359-400)||(26371006-26371047)
chr3 (303-332)||(43700213-43700242)
chr3 (280-332)||(36869968-36870020)
chr3 (350-406)||(43447695-43447751)
[»] chr5 (62 HSPs)
chr5 (221-498)||(15503902-15504176)
chr5 (303-456)||(6900800-6900952)
chr5 (214-379)||(16667455-16667630)
chr5 (280-400)||(21069052-21069172)
chr5 (280-405)||(17192605-17192730)
chr5 (283-376)||(767328-767421)
chr5 (303-388)||(8214616-8214701)
chr5 (214-376)||(36234547-36234707)
chr5 (214-332)||(30248944-30249060)
chr5 (281-376)||(12267374-12267469)
chr5 (299-376)||(13942744-13942821)
chr5 (366-498)||(15675409-15675540)
chr5 (359-499)||(35468992-35469131)
chr5 (280-332)||(35468946-35468998)
chr5 (366-498)||(14832699-14832830)
chr5 (359-498)||(2476454-2476592)
chr5 (280-329)||(15675356-15675405)
chr5 (280-332)||(33006950-33007002)
chr5 (214-332)||(34443945-34444061)
chr5 (383-498)||(7161972-7162086)
chr5 (413-499)||(33007028-33007114)
chr5 (359-456)||(34444055-34444151)
chr5 (280-332)||(34846410-34846462)
chr5 (350-406)||(39605800-39605856)
chr5 (211-328)||(43228655-43228782)
chr5 (411-498)||(1672375-1672462)
chr5 (22-148)||(42554186-42554312)
chr5 (383-456)||(16567904-16567976)
chr5 (359-456)||(30249054-30249150)
chr5 (281-328)||(7162096-7162143)
chr5 (214-269)||(8214694-8214749)
chr5 (402-498)||(13942641-13942736)
chr5 (281-328)||(32953680-32953727)
chr5 (211-269)||(6900749-6900807)
chr5 (214-272)||(16567770-16567828)
chr5 (52-146)||(28220954-28221048)
chr5 (383-456)||(32953598-32953670)
chr5 (413-499)||(34846488-34846574)
chr5 (280-332)||(7159610-7159662)
chr5 (413-498)||(8214527-8214612)
chr5 (350-397)||(7159525-7159572)
chr5 (281-328)||(16567847-16567894)
chr5 (413-456)||(36234485-36234528)
chr5 (413-456)||(37552056-37552099)
chr5 (413-456)||(37654886-37654929)
chr5 (214-272)||(2476383-2476441)
chr5 (214-272)||(7162162-7162220)
chr5 (214-272)||(17192748-17192806)
chr5 (214-272)||(32953746-32953804)
chr5 (214-272)||(34846334-34846392)
chr5 (411-456)||(12267313-12267358)
chr5 (280-316)||(42989577-42989613)
chr5 (281-328)||(1672499-1672546)
chr5 (281-328)||(37607513-37607560)
chr5 (281-328)||(37779720-37779767)
chr5 (413-456)||(37779785-37779828)
chr5 (214-272)||(12267488-12267546)
chr5 (284-330)||(15436041-15436086)
chr5 (214-272)||(37551937-37551995)
chr5 (214-272)||(37654767-37654825)
chr5 (211-272)||(21068973-21069034)
chr5 (359-400)||(33006996-33007037)
[»] chr1 (45 HSPs)
chr1 (214-454)||(4641969-4642206)
chr1 (214-400)||(9527024-9527208)
chr1 (303-400)||(49898442-49898539)
chr1 (211-376)||(24646030-24646192)
chr1 (287-400)||(34459159-34459272)
chr1 (219-406)||(6802042-6802231)
chr1 (280-376)||(24745455-24745551)
chr1 (214-332)||(25011556-25011672)
chr1 (214-332)||(27584033-27584149)
chr1 (214-332)||(27460675-27460791)
chr1 (214-332)||(14727297-14727425)
chr1 (214-338)||(44238872-44238995)
chr1 (214-332)||(25007443-25007559)
chr1 (280-332)||(31844640-31844692)
chr1 (180-330)||(48940438-48940598)
chr1 (211-315)||(4773983-4774085)
chr1 (359-498)||(14727419-14727557)
chr1 (280-332)||(6331729-6331781)
chr1 (413-498)||(31844529-31844614)
chr1 (214-332)||(37154010-37154126)
chr1 (214-332)||(44305391-44305507)
chr1 (359-499)||(1428306-1428445)
chr1 (359-499)||(44305501-44305640)
chr1 (214-269)||(49898394-49898449)
chr1 (359-498)||(25007553-25007691)
chr1 (413-492)||(49898530-49898609)
chr1 (359-495)||(37153881-37154016)
chr1 (383-498)||(4774085-4774199)
chr1 (22-125)||(4677562-4677665)
chr1 (413-497)||(33468860-33468944)
chr1 (359-436)||(27583963-27584039)
chr1 (280-332)||(8239334-8239388)
chr1 (361-436)||(44238791-44238865)
chr1 (359-456)||(25011467-25011562)
chr1 (499-568)||(34465157-34465226)
chr1 (413-456)||(27460821-27460864)
chr1 (293-332)||(33468970-33469009)
chr1 (313-379)||(4163481-4163546)
chr1 (214-272)||(33469019-33469077)
chr1 (303-332)||(1428439-1428468)
chr1 (359-400)||(6331775-6331816)
chr1 (359-400)||(8239382-8239423)
chr1 (359-400)||(31844605-31844646)
chr1 (211-272)||(31844710-31844771)
chr1 (468-500)||(42817793-42817825)
[»] chr8 (20 HSPs)
chr8 (214-456)||(34282790-34283033)
chr8 (178-456)||(13243024-13243316)
chr8 (280-424)||(39431591-39431734)
chr8 (214-332)||(24965012-24965128)
chr8 (214-332)||(28928038-28928155)
chr8 (359-498)||(28928149-28928287)
chr8 (281-396)||(31500781-31500902)
chr8 (366-497)||(36406378-36406508)
chr8 (214-320)||(27321882-27321986)
chr8 (214-328)||(38214738-38214850)
chr8 (280-332)||(36406509-36406561)
chr8 (359-456)||(3383949-3384045)
chr8 (411-456)||(27321792-27321837)
chr8 (91-143)||(12529914-12529966)
chr8 (413-456)||(38214868-38214911)
chr8 (214-272)||(3384109-3384167)
chr8 (280-332)||(21138078-21138130)
chr8 (468-501)||(34845641-34845674)
chr8 (25-148)||(43745804-43745924)
chr8 (350-406)||(17845206-17845262)
[»] chr4 (53 HSPs)
chr4 (280-456)||(2521828-2522003)
chr4 (214-456)||(49745019-49745242)
chr4 (280-400)||(25237620-25237740)
chr4 (199-372)||(41972417-41972588)
chr4 (211-456)||(50099817-50100056)
chr4 (214-400)||(8901783-8901966)
chr4 (22-176)||(35133431-35133585)
chr4 (214-332)||(31364115-31364231)
chr4 (283-375)||(36947565-36947657)
chr4 (280-499)||(52373782-52373983)
chr4 (214-332)||(10715634-10715752)
chr4 (214-332)||(10929404-10929522)
chr4 (214-326)||(50383868-50383978)
chr4 (214-332)||(4552165-4552281)
chr4 (359-498)||(46645693-46645831)
chr4 (217-332)||(40969207-40969320)
chr4 (359-498)||(4552275-4552413)
chr4 (282-332)||(4728604-4728654)
chr4 (359-456)||(10715746-10715842)
chr4 (359-456)||(10929516-10929612)
chr4 (359-498)||(4728648-4728786)
chr4 (22-148)||(30776094-30776220)
chr4 (359-456)||(40969314-40969410)
chr4 (214-332)||(2017457-2017573)
chr4 (280-332)||(10058581-10058633)
chr4 (359-499)||(2017324-2017463)
chr4 (281-328)||(9003612-9003659)
chr4 (281-328)||(9694144-9694191)
chr4 (281-328)||(14044402-14044449)
chr4 (383-456)||(9003669-9003741)
chr4 (413-497)||(10058659-10058743)
chr4 (281-332)||(31929051-31929102)
chr4 (366-498)||(32005980-32006111)
chr4 (283-332)||(2576218-2576268)
chr4 (411-456)||(41972372-41972417)
chr4 (413-498)||(11826936-11827021)
chr4 (413-498)||(14044467-14044552)
chr4 (280-332)||(46645647-46645699)
chr4 (413-456)||(31364257-31364300)
chr4 (214-272)||(4728526-4728584)
chr4 (214-272)||(32005894-32005952)
chr4 (179-262)||(34672300-34672381)
chr4 (361-498)||(2576264-2576400)
chr4 (217-269)||(15034554-15034606)
chr4 (413-498)||(25237731-25237816)
chr4 (350-392)||(6017211-6017253)
chr4 (214-272)||(11827104-11827162)
chr4 (214-272)||(25237544-25237602)
chr4 (214-272)||(46645571-46645629)
chr4 (359-400)||(10058627-10058668)
chr4 (217-269)||(1585692-1585744)
chr4 (214-270)||(2576139-2576195)
chr4 (280-332)||(41955269-41955321)
[»] chr6 (31 HSPs)
chr6 (280-444)||(2836109-2836272)
chr6 (211-332)||(34249033-34249152)
chr6 (343-449)||(31200094-31200199)
chr6 (214-329)||(23663782-23663895)
chr6 (343-456)||(31188242-31188354)
chr6 (214-332)||(10397812-10397928)
chr6 (214-332)||(1781042-1781158)
chr6 (218-349)||(339319-339448)
chr6 (359-456)||(9696145-9696241)
chr6 (280-332)||(2941266-2941318)
chr6 (280-332)||(9696099-9696151)
chr6 (359-499)||(2941312-2941451)
chr6 (214-328)||(2960664-2960776)
chr6 (280-332)||(9046935-9046987)
chr6 (179-332)||(15528880-15529042)
chr6 (283-329)||(15122090-15122136)
chr6 (390-456)||(28614334-28614399)
chr6 (413-501)||(1780928-1781016)
chr6 (413-497)||(10397698-10397782)
chr6 (281-328)||(14938934-14938981)
chr6 (366-498)||(15122140-15122271)
chr6 (310-376)||(34188856-34188922)
chr6 (359-456)||(34248943-34249039)
chr6 (359-496)||(15529036-15529172)
chr6 (217-272)||(9047005-9047060)
chr6 (373-456)||(23663689-23663771)
chr6 (214-272)||(34188770-34188828)
chr6 (391-456)||(2960794-2960858)
chr6 (413-456)||(339481-339524)
chr6 (413-456)||(14938852-14938895)
chr6 (214-272)||(9696023-9696081)
[»] chr7 (59 HSPs)
chr7 (280-413)||(3012353-3012486)
chr7 (284-497)||(19377442-19377638)
chr7 (234-502)||(21688114-21688380)
chr7 (214-400)||(814937-815121)
chr7 (211-497)||(21932631-21932917)
chr7 (280-498)||(28693891-28694112)
chr7 (280-405)||(38128940-38129065)
chr7 (214-400)||(42439526-42439710)
chr7 (280-376)||(4843347-4843443)
chr7 (280-358)||(41759602-41759680)
chr7 (24-137)||(27829355-27829468)
chr7 (312-396)||(41862314-41862398)
chr7 (46-148)||(3148372-3148474)
chr7 (211-328)||(5991432-5991556)
chr7 (281-332)||(26722958-26723009)
chr7 (214-328)||(30852322-30852434)
chr7 (280-332)||(23704489-23704541)
chr7 (221-272)||(5850707-5850758)
chr7 (281-328)||(7873232-7873279)
chr7 (411-498)||(814861-814948)
chr7 (89-143)||(8546719-8546773)
chr7 (359-502)||(35300312-35300454)
chr7 (55-176)||(8660254-8660375)
chr7 (383-456)||(22206616-22206688)
chr7 (383-456)||(22228051-22228123)
chr7 (280-332)||(35300448-35300500)
chr7 (283-331)||(38991181-38991229)
chr7 (281-328)||(25688202-25688249)
chr7 (46-176)||(8582664-8582794)
chr7 (55-148)||(8584535-8584628)
chr7 (359-456)||(23704399-23704495)
chr7 (52-148)||(7876833-7876929)
chr7 (52-148)||(8647708-8647804)
chr7 (281-317)||(22206709-22206745)
chr7 (281-317)||(22227994-22228030)
chr7 (217-272)||(3012280-3012335)
chr7 (413-456)||(5991350-5991393)
chr7 (49-140)||(8635506-8635597)
chr7 (214-265)||(19377362-19377413)
chr7 (413-456)||(26722889-26722932)
chr7 (413-456)||(30852452-30852495)
chr7 (214-269)||(41759701-41759756)
chr7 (55-133)||(1302321-1302399)
chr7 (390-456)||(4843440-4843505)
chr7 (390-456)||(7873150-7873215)
chr7 (180-272)||(7873298-7873387)
chr7 (91-148)||(17261438-17261495)
chr7 (359-400)||(26722923-26722964)
chr7 (49-137)||(8591402-8591490)
chr7 (89-148)||(8668509-8668568)
chr7 (214-272)||(22206764-22206822)
chr7 (214-272)||(22227917-22227975)
chr7 (214-272)||(26723028-26723086)
chr7 (214-272)||(35300518-35300576)
chr7 (55-148)||(6790420-6790513)
chr7 (95-140)||(8538854-8538899)
chr7 (46-111)||(8568839-8568904)
chr7 (55-148)||(10493000-10493093)
chr7 (413-495)||(25688102-25688184)
[»] scaffold0021 (2 HSPs)
scaffold0021 (298-400)||(112169-112271)
scaffold0021 (280-376)||(109275-109371)
[»] scaffold0075 (3 HSPs)
scaffold0075 (214-332)||(6890-7006)
scaffold0075 (359-499)||(11613-11752)
scaffold0075 (214-332)||(11504-11619)
[»] scaffold0618 (2 HSPs)
scaffold0618 (179-329)||(1641-1788)
scaffold0618 (366-499)||(1792-1924)
[»] scaffold0638 (3 HSPs)
scaffold0638 (281-328)||(4155-4202)
scaffold0638 (413-456)||(4220-4263)
scaffold0638 (214-270)||(4078-4134)


Alignment Details
Target: chr2 (Bit Score: 484; Significance: 0; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 484; E-Value: 0
Query Start/End: Original strand, 19 - 593
Target Start/End: Original strand, 12000307 - 12000880
Alignment:
Q  19 aaaacagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  12000307 aaaacagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcagtgaaagcaacacaagaaggtgttattttgt 12000406  T
Q  119 tgccttgatcgttgtgaatgatttcaactcgagagtgttgttccagccacactgcaaccgggggcggagccaacccccagctagcttgggcacaactcca 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  12000407 tgccttgatcgttgtgaatgatttcaactcgagagtgttgttccagccacactgcaaccgggggcggagccaacccccagctagcctgggcacaactcca 12000506  T
Q  219 actttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcagattttg 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  12000507 actttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga-tgttttgtgtaaattccgcaggaaacacatttcctgcagattttg 12000605  T
Q  319 ccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgt 418  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||||    
T  12000606 ccaaggatataggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaggaaatgtgaaattatccgccggaaaatgt 12000705  T
Q  419 gaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactgactgcaacacaagagtatgt 518  Q
     |||||||||||||||||||||||||||||||||||||        ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12000706 aaaattattcgcaggaaggacgtaacattttgcgataatttttttgcctaggctctatataattcctggctccgccactgactgcaacacaagagtatgt 12000805  T
Q  519 tgtgccgaggtctactcccacaacaagtccttcatatttcctcgccatgaatacgttattggtaggttttcttct 593  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12000806 tgtgccgaggtctactcccacagcaagtccttcatatttcctcgccatgaatacgttgttggtaggttttcttct 12000880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 280 - 456
Target Start/End: Original strand, 15651251 - 15651427
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  15651251 gtgtaaattccgcaggaaacacatttcctgcgtattttgccaaggatttaggtccctaggtgaggtaatgccttaggattttaggatcagtaggaaagat 15651350  T
Q  380 atatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| || ||||||||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||||||||    
T  15651351 atatccccaggaaatgtgaaattatccgcaggaaaatgtaaaattattcgcaggaaggacgtaacattttgcgataa 15651427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 214 - 501
Target Start/End: Complemental strand, 304258 - 303976
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||||  ||||||||| ||||| |||||||||||||||||||       ||||||||| ||||||||||||||||| ||||||    
T  304258 ctccaactttctttgtagcaagctcagccattactagaacttttagcttttcctgcggagtt----gtgtaaatttcgcaggaaacacatttcttgcaga 304163  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaa 413  Q
    ||||||||||||||||||| || | ||||||||| ||| || ||||||||||||||||||||||||||||||||| ||||||||||| ||||  | || |    
T  304162 ttttgccaaggatttaggttcccatgtgaggtaacaccataagattttaggatccgcaggaaagatatatccgcaggaaatgtgaaattatctgcagg-a 304064  T
Q  414 aatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactgact 501  Q
    |||||||||||||||||||  | || ||||| |||||||||||        || | |||||||| |||| ||||||||||||||||||    
T  304063 aatgtgaaattattcgcagataagaagtaacgttttgcgataatttttttgcccaaactctataaaatttctggctccgccactgact 303976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 12244528 - 12244374
Alignment:
Q  22 acagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgc 121  Q
    ||||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| || ||||||    
T  12244528 acagtgttttgagagttagcagcagcttgatttttagcagcatcaccaataaacctttgatcttcagtgaaagcaacacaagaaggtgttgttctgttgc 12244429  T
Q  122 cttgatcgttgtgaatgatttcaactcgagagtgttgttccagccacactgcaac 176  Q
    | ||||||||||||||||||||||| ||||||||||||||| |||| ||||||||    
T  12244428 cctgatcgttgtgaatgatttcaacacgagagtgttgttcctgccatactgcaac 12244374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 280 - 400
Target Start/End: Original strand, 17249362 - 17249482
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||||||||| ||||||||||||||| || |||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||  ||||||    
T  17249362 gtgtaaattccacaggaaacacatttcttgtagattttgccaaggatttaggttctcaggtgaggtaataccttaggattttaggatccgcattaaagat 17249461  T
Q  380 atatccgcaagaaatgtgaaa 400  Q
    ||||||||| |||||||||||    
T  17249462 atatccgcaggaaatgtgaaa 17249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 214 - 456
Target Start/End: Original strand, 25562903 - 25563158
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnng----------tgtaaattccgcaggaaacacat 303  Q
    ||||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||       |          |||||||||||||||||| ||||    
T  25562903 ctccaactttctttgtagcaagcccaaccattactagaacttttagcttttcctgcggatttatctgcggattgttttgtaaattccgcaggaaatacat 25563002  T
Q  304 ttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa---gata-tatccgcaagaaatgtgaa 399  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||||| |||||||   || | ||||| || ||||||||||    
T  25563003 ttcctgcagattttgccaaggatttaggttcccaggtgaggtaataccataggattttaggatccacaggaaatgtgaaattatccccaggaaatgtgaa 25563102  T
Q  400 actatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    | ||||  | || |||| |||||||||| |||| ||||| ||||| |||||||||||    
T  25563103 attatctgcagg-aaatatgaaattatttgcagaaaggaagtaacgttttgcgataa 25563158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 214 - 376
Target Start/End: Original strand, 17148761 - 17148920
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||||  ||||||||| || || |||||| ||| ||||||||       ||||||||||||||||||||||||||||||||||    
T  17148761 ctccaactttctttgtagcaagctcagccattactataacttttaggtttacctgcggattttt--gtgtaaattccgcaggaaacacatttcctgcaga 17148858  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||||| |||||||||||| || |||||||| |||||| ||||||||||||||||||||||||    
T  17148859 ttttgc-aaggatttaggttcccaggtgagggaataccataggattttaggatccgcaggaaa 17148920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 14705440 - 14705594
Alignment:
Q  22 acagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgc 121  Q
    ||||||||| ||| ||||||||| ||||| || ||||||||||||||||  ||||  ||||||||  ||||||||||| ||||||| ||| || | ||||    
T  14705440 acagtgtttcgagggttggcagcagcttgattcttagcagcatcaccaatcaaccgctgattttcggtgaaagcaacaaaagaaggagttgttctattgc 14705539  T
Q  122 cttgatcgttgtgaatgatttcaactcgagagtgttgttccagccacactgcaac 176  Q
    ||||||||||||||||||||||||||||| | ||||||||| |||| ||||||||    
T  14705540 cttgatcgttgtgaatgatttcaactcgataatgttgttcctgccatactgcaac 14705594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 214 - 456
Target Start/End: Original strand, 41010455 - 41010698
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||||||| ||||||  |||| |||| |||| ||||| |||||| |||| |||||||       || ||||||| |||||||||||||||||||||||    
T  41010455 ctccaactttttttgtactaagttcagctattactagaacttttagttttttctgcggattttt--gtataaattctgcaggaaacacatttcctgcaga 41010552  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa---gata-tatccgcaagaaatgtgaaactatccacc 409  Q
    |||| | |||||||||||| || | |||||||||||||  | |||||||||||||||||||||   || | |||||| | ||||||||||| | ||  |     
T  41010553 ttttactaaggatttaggttcccatgtgaggtaataccacaagattttaggatccgcaggaaatgtgaaattatccgtaggaaatgtgaaattttctgca 41010652  T
Q  410 ggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    || |||||||||||||||||||||||||| ||||| |||||||||||    
T  41010653 gg-aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 41010698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 25 - 176
Target Start/End: Original strand, 12235778 - 12235929
Alignment:
Q  25 gtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgcctt 124  Q
    |||||||| | ||||| ||| ||||| || ||||||||||||||||  ||||| ||||||||  ||||||||||| ||||||| ||| || | |||||||    
T  12235778 gtgttttgcgggttggaagcagcttgattcttagcagcatcaccaatcaacctctgattttcggtgaaagcaacaaaagaaggggttgttctattgcctt 12235877  T
Q  125 gatcgttgtgaatgatttcaactcgagagtgttgttccagccacactgcaac 176  Q
    |||||||||||||||| |||||||||||||| |||||| |||| ||||||||    
T  12235878 gatcgttgtgaatgatctcaactcgagagtgctgttcctgccatactgcaac 12235929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 7543254 - 7543408
Alignment:
Q  22 acagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgc 121  Q
    ||||||||||||| ||||| ||| ||||| || ||||||  |||||| |  ||||| ||||||||  ||||||||||| ||||||||||| || ||||||    
T  7543254 acagtgttttgagggttggaagcagcttgattcttagcattatcaccgatcaacctctgattttcggtgaaagcaacaaaagaaggtgttgttctgttgc 7543353  T
Q  122 cttgatcgttgtgaatgatttcaactcgagagtgttgttccagccacactgcaac 176  Q
    |||| |||||||||||||||||||||||| ||||||| ||| |||| ||||||||    
T  7543354 cttggtcgttgtgaatgatttcaactcgatagtgttgatcctgccatactgcaac 7543408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 13203747 - 13203863
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||       |||||||||||||||||||||| |||||||||||    
T  13203747 ctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaacacgtttcctgcaga 13203844  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  13203845 ttttgccaaggatttaggt 13203863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 6800021 - 6799905
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||||  || |||||| ||||| ||||| |||||||||||||       ||||||||||||||||||||||||||||||||||    
T  6800021 ctccaactttctttgtagcaagctcaaccattactagaatttttaacttttcctgcggattttt--gtgtaaattccgcaggaaacacatttcctgcaga 6799924  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  6799923 ttttgccaaggatttaggt 6799905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 18299278 - 18299162
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||| |||||| ||||| ||||| |||||| ||||||       ||||||||||||||||||||||||||||||||||    
T  18299278 ctccaactttctttgtagcaagcccaaccattactagaatttttaacttttcttgcggattttt--gtgtaaattccgcaggaaacacatttcctgcaga 18299181  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  18299180 ttttgccaaggatttaggt 18299162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 41115005 - 41114889
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||||  || |||||| ||||| |||||| ||||||||||||       ||||||||||||||||||||||||||||||||||    
T  41115005 ctccaactttctttgtagcaagctcaaccattactagaatttttagtttttcctgcggattttc--gtgtaaattccgcaggaaacacatttcctgcaga 41114908  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  41114907 ttttgccaaggatttaggt 41114889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 22 - 176
Target Start/End: Complemental strand, 12258039 - 12257885
Alignment:
Q  22 acagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgc 121  Q
    ||||||| ||||| ||||||||| ||||| || ||||||||||||||||  |||||||||| || | | ||||||||||||||||| ||| || |||| |    
T  12258039 acagtgtgttgagggttggcagcagcttgattcttagcagcatcaccaatcaacctttgatctttagtaaaagcaacacaagaaggcgttgttctgtttc 12257940  T
Q  122 cttgatcgttgtgaatgatttcaactcgagagtgttgttccagccacactgcaac 176  Q
    ||||||||||||||||||| ||| ||||| | | ||||||| |||| || |||||    
T  12257939 cttgatcgttgtgaatgatctcagctcgacaatattgttcctgccaaacagcaac 12257885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 214 - 376
Target Start/End: Complemental strand, 33909477 - 33909317
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||||  ||| ||||| ||||| |||||| |||||||||| |       ||| |||||| |||||| | ||||||||||||||    
T  33909477 ctccaactttctttgtagcaagctcagtcattactagaatttttagtttttcctgcgaattttt--gtgaaaattctgcaggagaaacatttcctgcaga 33909380  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||| |||| ||||||||| |  ||||||||||||||| |||||||||||||||| |||||||    
T  33909379 tttttccaaagatttaggttctcaggtgaggtaataccataggattttaggatccacaggaaa 33909317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 22572836 - 22572720
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| | | |||||| |||||  |||||||||||||||| |       ||||||||||| ||||||||||||||||||||||    
T  22572836 ctccaactttctttgtagcaagcctaaccattactagaatatttagcttttcctgcgaattttt--gtgtaaattccccaggaaacacatttcctgcaga 22572739  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  22572738 ttttgccaaggatttaggt 22572720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 13203857 - 13203953
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||| ||||||| | ||||||||||| ||||  | ||||||||||||||||||||| ||||||| |||||||||||||||||    
T  13203857 tttaggttccgcaggaaagagatatccgtaggaaatgtgaaattatctgc-ggaaaatgtgaaattattcgctggaaggaagtaacattttgcgataa 13203953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 329
Target Start/End: Original strand, 29257312 - 29257459
Alignment:
Q  179 ggggcggagccaacccccagctagcttgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnn 278  Q
    |||||||||||| |||||||||||  ||||| || |||||||||||||||||  ||| |||  ||||| || || ||||| |||||||| ||||          
T  29257312 ggggcggagcca-cccccagctagtctgggctcagctccaactttctttgtagaaagcccaatcattattaaaatttttaccttttccttcggattttt- 29257409  T
Q  279 ngtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattta 329  Q
     ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  29257410 -gtgtaaatttcgcaggaaacacatttcctgcagattttgccaagaattta 29257459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 366 - 499
Target Start/End: Original strand, 29257463 - 29257595
Alignment:
Q  366 tccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnac 465  Q
    ||||||||||||||||||||| | ||||||||||  ||||  | ||||| ||||||||||||||||| ||||| ||||| |||||||||||        |    
T  29257463 tccgcaggaaagatatatccgtaggaaatgtgaacttatctgcaggaaa-tgtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgc 29257561  T
Q  466 ctagactctatataattcctggctccgccactga 499  Q
    | |||||||||| |||||||||||||||||||||    
T  29257562 ccagactctataaaattcctggctccgccactga 29257595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 303 - 385
Target Start/End: Complemental strand, 16221089 - 16221007
Alignment:
Q  303 tttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatcc 385  Q
    |||||||| |||||||| ||||||||| || || ||||||| ||||||||||||||||||||||| ||||||||| |||||||    
T  16221089 tttcctgcggattttgctaaggatttaagttcccaggtgagataataccttaggattttaggatctgcaggaaaggtatatcc 16221007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 499
Target Start/End: Complemental strand, 6799911 - 6799772
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||  | || ||||||||||||||||||||||||||  |||| ||||| |||||      
T  6799911 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcagg-aaatgtgaaattattcgcaggaaggaactaacgttttgtgataaaa 6799813  T
Q  459 nnnnnacctagactctatataattcctggctccgccactga 499  Q
          || || ||||||| ||||||| |||||||||||||    
T  6799812 aatttgcccaggctctataaaattcctagctccgccactga 6799772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 41114895 - 41114799
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| |||||| |||||||||||||| | ||||||||||| ||||  | ||||| |||||||||||||||| |||||| ||||| |||||||||||    
T  41114895 tttaggttccgcaagaaagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcatgaaggaagtaacgttttgcgataa 41114799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 18299168 - 18299072
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| |||||| |||||||||||| | | ||||||||||| ||||  | ||||| ||||||||||||||||||||||| ||||| |||| ||||||    
T  18299168 tttaggttccgcaagaaagatatatctgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttacgataa 18299072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 323 - 400
Target Start/End: Complemental strand, 45444494 - 45444417
Alignment:
Q  323 ggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||||||| |  ||||||||||||||| ||||||||||||||| ||| ||||||||||||  || |||||||||||    
T  45444494 ggatttaggttcacaggtgaggtaataccataggattttaggatctgcaagaaagatatatctacaggaaatgtgaaa 45444417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 34756825 - 34756871
Alignment:
Q  350 ccttaggattttaggatccgcaggaaagatatatccgcaagaaatgt 396  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||    
T  34756825 ccttaggattttaggatccgcaggaaaggtatatccgcaggaaatgt 34756871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 16661158 - 16661065
Alignment:
Q  55 ttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactc 148  Q
    ||||||||| |||| || |||||||||   ||| | ||||||||| |||||||||| ||||||||||||| ||||||||| || || |||||||    
T  16661158 ttagcagcaccaccgaccaacctttgagcatcagtaaaagcaacaaaagaaggtgtaattttgttgccttcatcgttgtggataatctcaactc 16661065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 352 - 396
Target Start/End: Original strand, 35531900 - 35531944
Alignment:
Q  352 ttaggattttaggatccgcaggaaagatatatccgcaagaaatgt 396  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  35531900 ttaggattttaggatccgcaggaaagttatatccgcaggaaatgt 35531944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 2475949 - 2475992
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  2475949 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 2475992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 27702029 - 27702079
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagctttt 264  Q
    |||||||||||| |||||||| ||||||||||| || ||||||||||||||    
T  27702029 ctccaactttctctgtaacaaatccagccattactaaaagttttagctttt 27702079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 15429222 - 15429274
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||  |||||||  ||||||| |||||||||||||    
T  15429222 gtgtaaattccgcaggaaacatgtttcctgtggattttgtcaaggatttaggt 15429274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 34756735 - 34756787
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||| ||||| ||| |||||||  |||||||||||||||||||||    
T  34756735 gtgtaaattccgtaggaatcacgtttcctgtggattttgccaaggatttaggt 34756787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 17148939 - 17148982
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||    
T  17148939 aaatgtgaaattattcgcaggaaggaagtaacgttttgagataa 17148982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 22572694 - 22572651
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||| | ||||| |||||||||||    
T  22572694 aaatgtgaaattattcgcaggaagaaagtaacgttttgcgataa 22572651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 33909319 - 33909276
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    ||||||||||||||| ||| |||||| |||||||||||||||||    
T  33909319 aaatgtgaaattatttgcatgaaggatgtaacattttgcgataa 33909276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 2475802 - 2475860
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||||||||||||||  ||| |||||||||| ||||| ||||||||| || ||||||    
T  2475802 ctccaactttctttgtaggaagcccagccattactagaacttttagcttgtcttgcgga 2475860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 388
Target Start/End: Complemental strand, 42152549 - 42152511
Alignment:
Q  350 ccttaggattttaggatccgcaggaaagatatatccgca 388  Q
    |||||||||||||||||||| ||||||||||||| ||||    
T  42152549 ccttaggattttaggatccgtaggaaagatatattcgca 42152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 288 - 328
Target Start/End: Complemental strand, 29759895 - 29759855
Alignment:
Q  288 tccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||||||  |||||||| |||||||||||||||||    
T  29759895 tccgcaggaaacaggtttcctgccgattttgccaaggattt 29759855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 303 - 335
Target Start/End: Complemental strand, 42152615 - 42152583
Alignment:
Q  303 tttcctgcagattttgccaaggatttaggtccc 335  Q
    |||||||| ||||||||||||||||||||||||    
T  42152615 tttcctgcggattttgccaaggatttaggtccc 42152583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 8e-72; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 199 - 495
Target Start/End: Complemental strand, 33179275 - 33178983
Alignment:
Q  199 ctagcttgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaa 298  Q
    ||||||| ||| || |||||||||| |||||| ||||||||||||||| ||||| ||||||||||||||||| |       |||||||||||||||||||    
T  33179275 ctagcttaggctcagctccaactttttttgtagcaagtccagccattactagaacttttagcttttcctgcgaattttt--gtgtaaattccgcaggaaa 33179178  T
Q  299 cacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtga 398  Q
    |||||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||||||||| |||||||||||||||||||||  ||||||||    
T  33179177 cacatttcctgcagattttgccaaggatttaggttcccaggtgaggtaataccataggattttaggat-cgcaggaaagatatatccgcagaaaatgtga 33179079  T
Q  399 aactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgcca 495  Q
    || ||| |  | ||||||||||||||||||||||||| || ||||| |||||||||||        || |||||||||| |||||||| ||||||||    
T  33179078 aattat-ctgcagaaaatgtgaaattattcgcaggaatgaagtaacgttttgcgataaattttttgcccagactctataaaattcctgactccgcca 33178983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 180 - 400
Target Start/End: Original strand, 53068194 - 53068411
Alignment:
Q  180 gggcggagccaacccccagctagcttgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnn 279  Q
    ||||||||||| |||||| ||||| ||||| || ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||           
T  53068194 gggcggagccaccccccatctagcctgggc-cagctccaactttctttgtaacaagtccagccattactagaagttttaacttttcctgcggattttt-- 53068290  T
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||||||| ||||| ||| ||    
T  53068291 gtgtaaattccacaggaaacacatttcctgcagattttgccaagaatttaggttcctaggtgagataataccttaggattttaggattcgcagtaaaaat 53068390  T
Q  380 atatccgcaagaaatgtgaaa 400  Q
    |||||||||  ||||||||||    
T  53068391 atatccgcagaaaatgtgaaa 53068411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 283 - 376
Target Start/End: Complemental strand, 41218440 - 41218347
Alignment:
Q  283 taaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| |  | ||||||||||||||||||||||||||||||||||||||    
T  41218440 taaattccgcaggaaacacatttcctgccgattttgccaagaatttaggttctcatgtgaggtaataccttaggattttaggatccgcaggaaa 41218347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 53651883 - 53651999
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||       |||||||||||||||||||  |||||||||||||    
T  53651883 ctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaatgcatttcctgcaga 53651980  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  53651981 ttttgccaaggatttaggt 53651999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 296 - 376
Target Start/End: Complemental strand, 41358670 - 41358590
Alignment:
Q  296 aaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    ||||||||||||||| ||||||||||| ||||||||| |  ||||||||||||||||||||||||| ||||||||||||||    
T  41358670 aaacacatttcctgcggattttgccaatgatttaggttctcaggtgaggtaataccttaggatttttggatccgcaggaaa 41358590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 44047569 - 44047685
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||       |||||||||||||||||||   ||||||||||||    
T  44047569 ctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaatgtatttcctgcaga 44047666  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  44047667 ttttgccaaggatttaggt 44047685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 26371093 - 26371041
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26371093 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 26371041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 28311262 - 28311378
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||||||||||||||||||| ||  |||||| ||||| |||||| ||||||||||||       |||||||||||||||||||   |||||||| |||    
T  28311262 ctccaactttctttgtaacaagccctaccattactagaatttttagtttttcctgcggattttt--gtgtaaattccgcaggaaatgtatttcctgtaga 28311359  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  28311360 ttttgccaaggatttaggt 28311378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 7501051 - 7501186
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||  | ||||| ||||||||||||||||||||| | ||||| |||||||||||      
T  7501051 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaagtaagtaacgttttgcgataaat 7501149  T
Q  459 nnnnnacctagactctatataattcctggctccgcca 495  Q
         | | || ||||||| |||||||||||||||||    
T  7501150 tttttatcgaggctctataaaattcctggctccgcca 7501186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 7501005 - 7501057
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7501005 gtgtaaattccgcaggaaacacatttcctacagattttgccaaggatttaggt 7501057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 503
Target Start/End: Original strand, 28311372 - 28311515
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||| ||||||||||||||| | ||||||||||  ||||  | ||||| |||||||||||||| |||||||| ||||  |||||||||||      
T  28311372 tttaggttccgctggaaagatatatccgtaggaaatgtgaatttatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaatgttttgcgataaat 28311470  T
Q  459 nnnnnacctagactctatataattcctggctccgccactgactgc 503  Q
          || |||||||||| |||||||||||||||||||| ||||    
T  28311471 tttttgcccagactctataaaattcctggctccgccactggctgc 28311515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 215 - 332
Target Start/End: Original strand, 37516616 - 37516743
Alignment:
Q  215 tccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnng----------tgtaaattccgcaggaaacacatt 304  Q
    |||||||||||||||| |||||||| |||||| ||||| |||||||||||||||||||       |          ||||||||| ||||||||||||||    
T  37516616 tccaactttctttgtagcaagtccaaccattactagaatttttagcttttcctgcggatttacctgcggaattttgtgtaaattctgcaggaaacacatt 37516715  T
Q  305 tcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||| |||||    
T  37516716 tcctgcagattttgccaaggatctaggt 37516743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 53987876 - 53987961
Alignment:
Q  241 ccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||| ||||| |||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||| |||||||    
T  53987876 ccattactagaacttttagcttttcctgcggattttta--tgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 53987961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 413 - 499
Target Start/End: Complemental strand, 41218328 - 41218242
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactga 499  Q
    |||||||||||||||||||||||||| ||||| |||||||||||        ||||||||||||| |||||||| ||||||||||||    
T  41218328 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcctagactctataaaattcctgactccgccactga 41218242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 498
Target Start/End: Original strand, 12909923 - 12910059
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||  |||| || || |||||||||||||||||  ||||||| |||||  ||||||||||      
T  12909923 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctacagg-aaatgtgaaattattcg--ggaaggaagtaacgatttgcgataaat 12910019  T
Q  459 nnnnnacctagactctatataattcctggctccgccactg 498  Q
          || || ||||||| ||||||||||||||||||||    
T  12910020 tttttgcccaggctctataaaattcctggctccgccactg 12910059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 413 - 497
Target Start/End: Complemental strand, 26371015 - 26370931
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccact 497  Q
    |||||||||||||||||||||||||| ||||| |||||||||||        || |||||||||| |||||||||||||||||||    
T  26371015 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggctccgccact 26370931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 35077274 - 35077321
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  35077274 tgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 35077321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 14461050 - 14461166
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||| |||||||||| |||| ||  |||||| ||||| ||||| |||||||||||||        ||||||||||||||||||   || |||||||||    
T  14461050 ctccaattttctttgtagcaagccctaccattactagaatttttaacttttcctgcggattttta--tgtaaattccgcaggaaatgtatgtcctgcaga 14461147  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  14461148 ttttgccaaggatttaggt 14461166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 497
Target Start/End: Original strand, 14461160 - 14461297
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||  ||||  | || |||||| |||||||||| |||||||| ||||| ||||| |||||      
T  14461160 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcagg-aaatgtaaaattattcgtaggaaggaagtaacgttttgtgataaat 14461258  T
Q  459 nnnnnacctagactctatataattcctggctccgccact 497  Q
          || || ||||||| |||||||||||||||||||    
T  14461259 tttttgcccaggctctataaaattcctggctccgccact 14461297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 221 - 368
Target Start/End: Complemental strand, 47511773 - 47511628
Alignment:
Q  221 tttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcagattttgcc 320  Q
    |||||||||||||||||||||||||| |||||  ||| ||||||||||||||       || ||||||  | |||||||||||||||||| ||||||||     
T  47511773 tttctttgtaacaagtccagccattactagaacctttcgcttttcctgcgga--tttttgtataaattttgaaggaaacacatttcctgcggattttgct 47511676  T
Q  321 aaggatttaggtccctaggtgaggtaataccttaggattttaggatcc 368  Q
    || |||||| ||  |  | |||  |||||||||| |||||||||||||    
T  47511675 aaagatttaagtttcctgatgaaataataccttaagattttaggatcc 47511628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 25391960 - 25391844
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||| ||| |||| ||  |||||| ||||| |||||||||||||||||||       |||||||||||||| ||||   ||||| |||| |    
T  25391960 ctccaactttcttcgtagcaagccctaccattactagaatttttagcttttcctgcgga--tttttgtgtaaattccgcaagaaatgtatttcttgcaaa 25391863  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  25391862 ttttgccaaggatttaggt 25391844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 37516769 - 37516854
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    |||||||||||||||||||||||||| ||||| |||||||||||        || || ||||||| ||||||||||||||||||||    
T  37516769 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgccactg 37516854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 38239502 - 38239554
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||| ||||||||||||||| |||| |||||||||||||||||||||    
T  38239502 gtgtaaattctgcaggaaacacattttctgcggattttgccaaggatttaggt 38239554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 359 - 455
Target Start/End: Complemental strand, 43700219 - 43700124
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgata 455  Q
    |||||| |||||||||||||||||||||   ||||||||||| ||||  | ||||| ||||||||||||||||| || || ||||| ||||||||||    
T  43700219 tttaggttccgcaggaaagatatatccgttggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcagaaaagaagtaacgttttgcgata 43700124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 179 - 332
Target Start/End: Original strand, 12909765 - 12909929
Alignment:
Q  179 ggggcggagccaacccccagctagcttgggca-----caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggan 273  Q
    |||||||||||| |||||||||||| |||||      || ||||||||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||     
T  12909765 ggggcggagccaccccccagctagcctgggccaggctcagctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcgga- 12909863  T
Q  274 nnnnnngtgtaaattccgcaggaaa--------cacatttcctgcagattttgccaaggatttaggt 332  Q
          |||||||||||||||||||        |  ||||||||||||||||||||| |||||||||    
T  12909864 -tttttgtgtaaattccgcaggaaatgtattttctgatttcctgcagattttgccaaagatttaggt 12909929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 26278413 - 26278460
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  26278413 tgtaaattccggaggaaacacatttcctgcagattttgcctaggattt 26278460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 53651993 - 53652128
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| || |||||||||||||||||| | ||||||||||  ||||  | ||||| |||||||||||||| |||||| ||||||  |||||||||||      
T  53651993 tttaggttctgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaa-tgtgaaattattcgtaggaagaacgtaatgttttgcgataaat 53652091  T
Q  459 nnnnnacctagactctatataattcctggctccgcca 495  Q
           | |||||||||| |||||||||||||||||    
T  53652092 tttttgtccagactctataaaattcctggctccgcca 53652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 7500929 - 7500987
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||    
T  7500929 ctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcgga 7500987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 237 - 328
Target Start/End: Original strand, 9600358 - 9600447
Alignment:
Q  237 ccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||| ||||| |||| ||||||||||||||        ||||||||| |||||||||||||||||||||||||||||  |||||||    
T  9600358 ccagccattactagaacttttggcttttcctgcggattttta--tgtaaattctgcaggaaacacatttcctgcagattttgcttaggattt 9600447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 43700290 - 43700235
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgc 269  Q
    ||||||||||||||||| |||| ||| |||||| ||||| ||||||||||||||||    
T  43700290 ctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgc 43700235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 53987979 - 53988022
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  53987979 aaatgtgaaattattcgcaggaaggaagtaacattttgcaataa 53988022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 41218519 - 41218461
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||| |||||| ||||| |||| |||||||||| ||||| |||||||||||||||||||    
T  41218519 ctccgactttccttgtagcaagcccagccattactagaacttttagcttttcctgcgga 41218461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 44047679 - 44047775
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| |||||| |||||||||||||| | ||||||||||  ||||  | || ||||||||||||||| | ||||| || ||||| |||||||||||    
T  44047679 tttaggttccgcaagaaagatatatccgtaggaaatgtgaatttatctgcagg-aaatgtgaaattatttgtaggaaagaagtaacgttttgcgataa 44047775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 26278478 - 26278563
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    ||||||||||||||||||| |||||| ||| |||||||||||||        |||| |||||||| |||| || ||||||||||||    
T  26278478 aaatgtgaaattattcgcaagaaggaagtatcattttgcgataatttttttgcctaaactctataaaatttcttgctccgccactg 26278563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 295 - 330
Target Start/End: Original strand, 43447620 - 43447655
Alignment:
Q  295 gaaacacatttcctgcagattttgccaaggatttag 330  Q
    ||||||| ||||||||||||||||||||||||||||    
T  43447620 gaaacacgtttcctgcagattttgccaaggatttag 43447655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 44625683 - 44625738
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgc 269  Q
    ||||||||||||||||| |||| ||| | |||| ||||| ||||||||||||||||    
T  44625683 ctccaactttctttgtagcaagcccaactattactagaatttttagcttttcctgc 44625738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 25391850 - 25391809
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||| ||||||||||||||||||||| | |||||||||||    
T  25391850 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaa 25391809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 26371047 - 26371006
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||| ||||||||||||||||||||| | |||||||||||    
T  26371047 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaa 26371006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 332
Target Start/End: Complemental strand, 43700242 - 43700213
Alignment:
Q  303 tttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||||||||||||||||||||    
T  43700242 tttcctgcagattttgccaaggatttaggt 43700213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 36869968 - 36870020
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||| | ||||||   ||||||| |||||||||||||    
T  36869968 gtgtaaattccgcaggaaacccgtttcctaaggattttgtcaaggatttaggt 36870020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 43447695 - 43447751
Alignment:
Q  350 ccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatcc 406  Q
    ||||||||||||||||||||||  |||||||||||| ||  |||||| ||| |||||    
T  43447695 ccttaggattttaggatccgcataaaagatatatccacagaaaatgtaaaattatcc 43447751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 1e-67; HSPs: 62)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 221 - 498
Target Start/End: Original strand, 15503902 - 15504176
Alignment:
Q  221 tttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcagattttgcc 320  Q
    |||||||||| |||| | | |||||| ||||| |||||||||||||||||||       |||||||||| ||||||||||||||||||||||||||||||    
T  15503902 tttctttgtagcaagcctaaccattactagaatttttagcttttcctgcggattttt--gtgtaaattctgcaggaaacacatttcctgcagattttgcc 15503999  T
Q  321 aaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtga 420  Q
    |||||||||||| || || |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||| ||||  | || ||||||||    
T  15504000 aaggatttaggttcccagatgaggtaataccataggattttaggatccgcgggaaagatatatccgcaggaaatgtgaaattatctgcagg-aaatgtga 15504098  T
Q  421 aattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    |||||||||||||||||| |||||||||||||||||         | || |||||||||||| |||||||||||||||    
T  15504099 aattattcgcaggaaggaagtaacattttgcgataaattttttgtcgaggctctatataatttctggctccgccactg 15504176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 303 - 456
Target Start/End: Original strand, 6900800 - 6900952
Alignment:
Q  303 tttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaact 402  Q
    |||||||||||||||| ||||||||||||| || || | || |||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| |    
T  6900800 tttcctgcagattttgtcaaggatttaggttcccagattagataatattttaggattttaggatccgcgggaaagatatatccgcaagaaatgtgaaatt 6900899  T
Q  403 atccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||| | || ||||||||||||||||||| |||||| |||||||||||||||||    
T  6900900 atccgcagg-aaatgtgaaattattcgcatgaaggaagtaacattttgcgataa 6900952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 214 - 379
Target Start/End: Complemental strand, 16667630 - 16667455
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnng----------tgtaaattccgcaggaaacacat 303  Q
    ||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||       |          |||||||||||||||||||||||    
T  16667630 ctccaactttctttgtagcaagtccagccattactagaacttttagcttttcctgcggatttacctgcggatttttgtgtaaattccgcaggaaacacat 16667531  T
Q  304 ttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||| ||||||||||||||||||| |||||||    
T  16667530 ttcctgcagattttgccaaggatttaggttcccatgtgaggtaataccataggattttaggatccgcaagaaagat 16667455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 280 - 400
Target Start/End: Original strand, 21069052 - 21069172
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||| |||||||||||||||| ||||||||||    
T  21069052 gtgtatattccgcaagaaacacatttcctgcagattttgccaaagatttaggttcctaggtgaggttataccataggattttaggatccacaggaaagat 21069151  T
Q  380 atatccgcaagaaatgtgaaa 400  Q
    ||||| ||| |||||||||||    
T  21069152 atatctgcaggaaatgtgaaa 21069172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 280 - 405
Target Start/End: Complemental strand, 17192730 - 17192605
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    |||| |||||||||||||| ||||||||||||||||||| ||||||||||||| || || |||||||||||| | |||||||||||||||||||||||||    
T  17192730 gtgtcaattccgcaggaaatacatttcctgcagattttgtcaaggatttaggttcccagatgaggtaataccattggattttaggatccgcaggaaagat 17192631  T
Q  380 atatccgcaagaaatgtgaaactatc 405  Q
    |||| ||||  |||||||||| ||||    
T  17192630 atattcgcagaaaatgtgaaattatc 17192605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 283 - 376
Target Start/End: Original strand, 767328 - 767421
Alignment:
Q  283 taaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||| | || ||||||||||||||||||||||||||||||| ||||||||    
T  767328 taaattccgcaggaaacacatttcctacaggttttgccaaggatttagattcccaggtgaggtaataccttaggattttaggatctgcaggaaa 767421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 303 - 388
Target Start/End: Complemental strand, 8214701 - 8214616
Alignment:
Q  303 tttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgca 388  Q
    |||||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8214701 tttcctgcagattttgtcaaggatttaggttcttaggtgaggtaatactttaggattttaggatccgcaggaaagatatatccgca 8214616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 214 - 376
Target Start/End: Complemental strand, 36234707 - 36234547
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||| |||||||||| |||| |||||||||| ||||| ||||| |||||| ||||||        ||||||||| ||||||||| |||||||||||||    
T  36234707 ctccaattttctttgtagcaagcccagccattattagaacttttaacttttcatgcggattttta--tgtaaattcagcaggaaacgcatttcctgcaga 36234610  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||| |||||| |||| || |||||||||||| ||||| ||  ||||||||||||||||||||    
T  36234609 ttttaccaagggtttaagttcctaggtgaggtgataccataacattttaggatccgcaggaaa 36234547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 30248944 - 30249060
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||| | |||| ||||| ||||||||||| |||||||       ||||||||||||||||||||||||||||||||||    
T  30248944 ctccaactttctttgtagcaagcccaactattactagaatttttagctttttctgcggattttt--gtgtaaattccgcaggaaacacatttcctgcaga 30249041  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  30249042 ttttgccaaggatttaggt 30249060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 281 - 376
Target Start/End: Complemental strand, 12267469 - 12267374
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    ||||||||||||| ||||||||||||||| ||||||||||| | |||||| | | |||||||||||||||| ||||||||||||||||||||||||    
T  12267469 tgtaaattccgcaagaaacacatttcctgtagattttgccacgaatttagattcgtaggtgaggtaataccataggattttaggatccgcaggaaa 12267374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 299 - 376
Target Start/End: Complemental strand, 13942821 - 13942744
Alignment:
Q  299 cacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||||||||||||||||||||||||||||||| |    ||||||||||||||||||||||||||||||||||||||||    
T  13942821 cacatttcctgcagattttgccaaggatttagattatcaggtgaggtaataccttaggattttaggatccgcaggaaa 13942744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 366 - 498
Target Start/End: Original strand, 15675409 - 15675540
Alignment:
Q  366 tccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnac 465  Q
    ||||||||||||||||||||| | ||||||||||| |||| || ||||| ||||||||||||||||||||||| ||||| |||||||||||        |    
T  15675409 tccgcaggaaagatatatccgaaggaaatgtgaaattatctacaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgc 15675507  T
Q  466 ctagactctatataattcctggctccgccactg 498  Q
    | || ||||||| ||||||| ||||||||||||    
T  15675508 ccaggctctataaaattcctagctccgccactg 15675540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 359 - 499
Target Start/End: Original strand, 35468992 - 35469131
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| |  |||||||||| ||||  | ||||| ||||||||||||||||||||||| |||||||||||||||||      
T  35468992 tttaggttccgcaggaaagatatatccgtagaaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaacattttgcgataaat 35469090  T
Q  459 nnnnnacctagactctatataattcctggctccgccactga 499  Q
          || || ||||||| |||||||||||| ||||||||    
T  35469091 tttttgcccaggctctataaaattcctggctcagccactga 35469131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 35468946 - 35468998
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35468946 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 35468998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 366 - 498
Target Start/End: Complemental strand, 14832830 - 14832699
Alignment:
Q  366 tccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnac 465  Q
    ||||||||||||||||||||| | ||||||||||| ||||  | ||||| ||||||||||||||||||||||| ||||  |||||||||||        |    
T  14832830 tccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaatgttttgcgataaattttttgc 14832732  T
Q  466 ctagactctatataattcctggctccgccactg 498  Q
    | |||||||||| |||| |||||||||||||||    
T  14832731 ccagactctataaaatttctggctccgccactg 14832699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 498
Target Start/End: Original strand, 2476454 - 2476592
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||  ||||  | ||||| |||||||||||||| |||||||| ||||| |||||||||||      
T  2476454 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataaat 2476552  T
Q  459 nnnnnacctagactctatataattcctggctccgccactg 498  Q
          || || |||||||||||| |||||||||||||||    
T  2476553 tttttgcccaggctctatataatttctggctccgccactg 2476592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 280 - 329
Target Start/End: Original strand, 15675356 - 15675405
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattta 329  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15675356 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattta 15675405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 33006950 - 33007002
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  33006950 gtgtaaattccgtaggaaacacatttcctgcagattttgccaaggatttaggt 33007002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 34443945 - 34444061
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||  |||||| ||||| || ||||||||||||||||       || ||||||||||| ||||  |||||||||||||    
T  34443945 ctccaactttctttgtagcaagccctaccattactagaatttgtagcttttcctgcggattttt--gtctaaattccgcaagaaatgcatttcctgcaga 34444042  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  34444043 ttttgccaaggatttaggt 34444061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 498
Target Start/End: Complemental strand, 7162086 - 7161972
Alignment:
Q  383 tccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataatt 482  Q
    |||||| ||||||||||| ||||||| ||||| |||||||||||| |||||||||| |||||||||||||||||        || || ||||||| ||||    
T  7162086 tccgcaggaaatgtgaaattatccacaggaaa-tgtgaaattatttgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatt 7161988  T
Q  483 cctggctccgccactg 498  Q
     |||||||||||||||    
T  7161987 tctggctccgccactg 7161972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 413 - 499
Target Start/End: Original strand, 33007028 - 33007114
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactga 499  Q
    |||||||||||||||||||||||||| ||||| |||||||||||        || |||||||||| |||||||||||||||||||||    
T  33007028 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggctccgccactga 33007114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 34444055 - 34444151
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||||| | ||||||||||  ||||  | ||||| |||||||||||||| |||||||| ||||| |||||||||||    
T  34444055 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataa 34444151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 34846410 - 34846462
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  34846410 gtgtaaattccgcagtaaacacatttcctacagattttgccaaggatttaggt 34846462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 350 - 406
Target Start/End: Complemental strand, 39605856 - 39605800
Alignment:
Q  350 ccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatcc 406  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| || |||||    
T  39605856 ccttaggattttaggatccgcaggaaagatatatccgcaggaaatgtgcaattatcc 39605800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 211 - 328
Target Start/End: Complemental strand, 43228782 - 43228655
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnng----------tgtaaattccgcaggaaaca 300  Q
    ||||||||| |||||||||| |||| |||||||||| ||||| |||||||||||||| ||||       |          ||||||||||||||||||||    
T  43228782 caactccaattttctttgtagcaagcccagccattactagaacttttagcttttcctacggatttacctgcggatgtttatgtaaattccgcaggaaaca 43228683  T
Q  301 catttcctgcagattttgccaaggattt 328  Q
    |||||||||||||||||||| |||||||    
T  43228682 catttcctgcagattttgcctaggattt 43228655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 411 - 498
Target Start/End: Complemental strand, 1672462 - 1672375
Alignment:
Q  411 gaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    |||||||||||||||||||||||||||| |||||||||||||||||        || || ||||||| |||| |||||||||||||||    
T  1672462 gaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataatttttttgcccaggctctataaaatttctggctccgccactg 1672375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 22 - 148
Target Start/End: Complemental strand, 42554312 - 42554186
Alignment:
Q  22 acagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgc 121  Q
    ||||||||||| | |||||  |||| ||| |  ||||||||||||||||  ||||||| ||  | | | ||||||||| ||||||||||| |||||||||    
T  42554312 acagtgttttgggggttggtggcggtttgatccttagcagcatcaccaatcaacctttcatgatgagtaaaagcaacaaaagaaggtgttgttttgttgc 42554213  T
Q  122 cttgatcgttgtgaatgatttcaactc 148  Q
    ||||||| |||||||| || |||||||    
T  42554212 cttgatcattgtgaataatctcaactc 42554186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 16567904 - 16567976
Alignment:
Q  383 tccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||| ||||| | ||||| ||||||||||||| ||||||||| |||||||||||||||||    
T  16567904 tccgcaggaaatgtgaaattatccgcaggaaa-tgtgaaattattcccaggaaggaagtaacattttgcgataa 16567976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 30249054 - 30249150
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||| |  | ||||||||||||||||| |||||||| | | ||| |||||||||||    
T  30249054 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaattat-ctgcagaaaatgtgaaattatttgcaggaagaaagcaacgttttgcgataa 30249150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 7162143 - 7162096
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||||    
T  7162143 tgtaaattccacaggaaacacatttcctgcagattttgcctaggattt 7162096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 8214749 - 8214694
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgc 269  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||| ||||||||||    
T  8214749 ctccaactttttttgtaacaagtctagccattactagaagttttatcttttcctgc 8214694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 402 - 498
Target Start/End: Complemental strand, 13942736 - 13942641
Alignment:
Q  402 tatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    ||||||| ||||| ||||||||||||||||||||||| ||||| |||||||||||       ||| || ||||||| |||| |||||||||||||||    
T  13942736 tatccacaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttgcgataatttttttacccaggctctataaaatttctggctccgccactg 13942641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 32953727 - 32953680
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  32953727 tgtaaattccgtaggaaacacatttcctgcagattttgcctaggattt 32953680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 211 - 269
Target Start/End: Original strand, 6900749 - 6900807
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgc 269  Q
    |||||||||||||||||||| ||||  ||||||||| ||||| ||||||||||||||||    
T  6900749 caactccaactttctttgtagcaagctcagccattactagaacttttagcttttcctgc 6900807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 16567770 - 16567828
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| |||||||||| ||||||||||||||| ||||| |||||||||||| ||||||    
T  16567770 ctccaattttctttgtagcaagtccagccattactagaacttttagcttttcttgcgga 16567828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 52 - 146
Target Start/End: Original strand, 28220954 - 28221048
Alignment:
Q  52 tttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaac 146  Q
    |||||||||||||| ||||  ||||||| ||  ||  ||||||||||| ||||||| ||| |||||||||||||||| |||||||| || |||||    
T  28220954 tttttagcagcatcgccaatcaacctttcatcatcggtgaaagcaacaaaagaaggagttgttttgttgccttgatcattgtgaataatctcaac 28221048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 32953670 - 32953598
Alignment:
Q  383 tccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||| ||||  | ||||| |||||||||||||| |||||||| |||||||||||||||||    
T  32953670 tccgcaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacattttgcgataa 32953598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 413 - 499
Target Start/End: Original strand, 34846488 - 34846574
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactga 499  Q
    |||||||||||||||||||||||||| ||||| |||||||||||         | || ||||||| |||||||||||||||||||||    
T  34846488 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgtccaggctctataaaattcctggctccgccactga 34846574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 7159662 - 7159610
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||| |||||||||||||||| |||||||| |||||||||||| ||||||||    
T  7159662 gtgtacattccgcaggaaacacgtttcctgcggattttgccaagaatttaggt 7159610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 498
Target Start/End: Complemental strand, 8214612 - 8214527
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    |||| ||||||||||||||||||| |||||||||||| ||||||       ||| || |||| |||||||||||| ||||||||||    
T  8214612 aaatatgaaattattcgcaggaagtacgtaacattttacgataatttttttaccaaggctctttataattcctggttccgccactg 8214527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 350 - 397
Target Start/End: Complemental strand, 7159572 - 7159525
Alignment:
Q  350 ccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtg 397  Q
    ||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  7159572 ccttaggattttaggatccgcagaaaaggtatatccgcatgaaatgtg 7159525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 16567847 - 16567894
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||| ||||||||||||||||||| ||||||||||| |||||||    
T  16567847 tgtaaatttcgcaggaaacacatttcctacagattttgcctaggattt 16567894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 36234528 - 36234485
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    ||||||||||||||||||| |||||| |||||||||||||||||    
T  36234528 aaatgtgaaattattcgcaagaaggaagtaacattttgcgataa 36234485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 37552056 - 37552099
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  37552056 aaatgtgaaattattcgcaggaaggaagtaacattttgcaataa 37552099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 37654886 - 37654929
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  37654886 aaatgtgaaattattcgcaggaaggaagtaacattttgcaataa 37654929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 2476383 - 2476441
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| |||||||||| |||||||  |||||| ||||| |||||||||||||||||||    
T  2476383 ctccaattttctttgtagcaagtcctaccattactagaatttttagcttttcctgcgga 2476441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 7162220 - 7162162
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| |||||||||| |||| |||||||||| || || |||||||||||||||||||    
T  7162220 ctccaattttctttgtagcaagcccagccattactaaaaattttagcttttcctgcgga 7162162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 17192806 - 17192748
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| ||||  ||||||||| ||||| |||||||| ||||||||||    
T  17192806 ctccaactttctttgtagcaagctcagccattactagaacttttagctcttcctgcgga 17192748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 32953804 - 32953746
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| |||||||||| |||| |||||||||| ||||| |||||||||||||| ||||    
T  32953804 ctccaattttctttgtagcaagcccagccattactagaacttttagcttttcctacgga 32953746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 34846334 - 34846392
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||||| | |||||| ||||| ||||||||| |||||||||    
T  34846334 ctccaactttctttgtagcaagtcaaaccattactagaatttttagcttatcctgcgga 34846392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 456
Target Start/End: Complemental strand, 12267358 - 12267313
Alignment:
Q  411 gaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||| ||||||||| ||||| |||||||||||    
T  12267358 gaaaatgtgaaattattcacaggaaggaagtaacgttttgcgataa 12267313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 316
Target Start/End: Original strand, 42989577 - 42989613
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattt 316  Q
    ||||||||||||||||||||||||||||||| |||||    
T  42989577 gtgtaaattccgcaggaaacacatttcctgcggattt 42989613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 1672546 - 1672499
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||| ||||||||||||||| |||| |||||||||||||| |||||||    
T  1672546 tgtacattccgcaggaaacatattttctgcagattttgcctaggattt 1672499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 37607513 - 37607560
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    ||||||||||| | |||||||||||||||||||||||| | |||||||    
T  37607513 tgtaaattccgtatgaaacacatttcctgcagattttgtctaggattt 37607560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 37779720 - 37779767
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    ||||||||||| | |||||||||||||||||||||||| | |||||||    
T  37779720 tgtaaattccgtatgaaacacatttcctgcagattttgtctaggattt 37779767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 37779785 - 37779828
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||| ||||||| |||||||||| ||||||    
T  37779785 aaatgtgaaattattcgctggaaggaagtaacattttacgataa 37779828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 12267546 - 12267488
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||| | ||| |||| ||||| ||||||||||||||| |||    
T  12267546 ctccaactttctttgtagcaagcctagcaattactagaacttttagcttttcctgtgga 12267488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 330
Target Start/End: Original strand, 15436041 - 15436086
Alignment:
Q  284 aaattccgcaggaaacacatttcctgcagattttgccaaggatttag 330  Q
    ||||||||||||||||| ||||||||| ||||||||| |||||||||    
T  15436041 aaattccgcaggaaaca-atttcctgcggattttgcctaggatttag 15436086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 37551937 - 37551995
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| ||||||| || |||||||||| |||| ||||| ||||| |||||||||||||    
T  37551937 ctccaattttctttctagcaagtccagctattactagaacttttatcttttcctgcgga 37551995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 37654767 - 37654825
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| ||||||| || |||||||||| |||| ||||| ||||| |||||||||||||    
T  37654767 ctccaattttctttctagcaagtccagctattactagaacttttatcttttcctgcgga 37654825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Original strand, 21068973 - 21069034
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| |||||||||||||  ||| ||| |||||| ||||| ||||||| |||||||||||    
T  21068973 caactctaactttctttgtagtaagcccaaccattactagaatttttagcctttcctgcgga 21069034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 33006996 - 33007037
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||| ||||||||||||||||||||| | |||||||||||    
T  33006996 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaa 33007037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 124; Significance: 2e-63; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 214 - 454
Target Start/End: Complemental strand, 4642206 - 4641969
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||| |||||||||||| ||||| ||||||||| ||||| |||||||||||||||||||        |||||||| | ||||||| ||||||| ||||||    
T  4642206 ctccgactttctttgtagcaagttcagccattactagaacttttagcttttcctgcggattttta--tgtaaatttcacaggaaatacatttcttgcaga 4642109  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaa 413  Q
    ||||| |||||||||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| | || |    
T  4642108 ttttgtcaaggatttaggtttcgaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaggaaatatgaaattatccgcagg-a 4642010  T
Q  414 aatgtgaaattattcgcaggaaggacgtaacattttgcgat 454  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  4642009 aatgtgaaattattcgcaggaaggaagtaacgttttgcgat 4641969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 9527024 - 9527208
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||||       ||||||||| | |||||||||||| |||||||||    
T  9527024 ctccaactttctttgtagcaagcccagccattactagaacttttagcttttcctgcggattttg--gtgtaaatttcacaggaaacacatctcctgcaga 9527121  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    ||||||||||||||||||| || ||||||||||||| |||||||||||||||||| |  |||||||||||||  | |||||||||||    
T  9527122 ttttgccaaggatttaggttcccaggtgaggtaatatcttaggattttaggatcctccagaaagatatatccataggaaatgtgaaa 9527208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 303 - 400
Target Start/End: Original strand, 49898442 - 49898539
Alignment:
Q  303 tttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  49898442 tttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaagaaagatatatccacaggaaatgtgaaa 49898539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 211 - 376
Target Start/End: Original strand, 24646030 - 24646192
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgc 310  Q
    |||||||||||||||||||| ||| || | |||||| ||||| ||||||||||||||| |||       ||||| |||||| ||||||||||||||||||    
T  24646030 caactccaactttctttgtagcaactcaa-ccattactagaacttttagcttttcctgtggattttt--gtgtacattccgtaggaaacacatttcctgc 24646126  T
Q  311 agattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||||||||||||||||||||| || ||||||||||||||||| ||||||| ||||||||||||||    
T  24646127 agattttgccaaggatttaggttcccaggtgaggtaatacctttggatttttggatccgcaggaaa 24646192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 287 - 400
Target Start/End: Original strand, 34459159 - 34459272
Alignment:
Q  287 ttccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccg 386  Q
    ||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||||||||||||||||||||||||||||||| |||||||||||| |    
T  34459159 ttccgtaggaaacacatttcctgcagattttgccaaggatttaagttctcaggtgaggtaataccttaggattttaggatccgcaagaaagatatatctg 34459258  T
Q  387 caagaaatgtgaaa 400  Q
     | |||||||||||    
T  34459259 taggaaatgtgaaa 34459272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 219 - 406
Target Start/End: Complemental strand, 6802231 - 6802042
Alignment:
Q  219 actttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgca----gat 314  Q
    |||||||||||| ||||  ||||||||| ||||| || | ||||||||||||||        |||||||||| |||||||||||||||||||     |||    
T  6802231 actttctttgtagcaagctcagccattactagaacttctcgcttttcctgcggatttttc--tgtaaattccacaggaaacacatttcctgcctgcggat 6802134  T
Q  315 tttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatcc 406  Q
    |||||||||||||||||| || |||||||||||||||||| ||||||||||||| |||||||| |||||| ||| |||||||| || |||||    
T  6802133 tttgccaaggatttaggttcccaggtgaggtaataccttacgattttaggatcctcaggaaaggtatatctgcaggaaatgtgcaattatcc 6802042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 24745455 - 24745551
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||||||    ||||||||||||||| ||||||||||||||||||||||||    
T  24745455 gtgtaaattctgcaggaaacacattttctgcagattttgccaaggatttaggttttaaggtgaggtaataccctaggattttaggatccgcaggaaa 24745551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 25011672 - 25011556
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||       |||||||||||||||||||||||||| |||||||    
T  25011672 ctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaacacattttctgcaga 25011575  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  25011574 ttttgccaaggatttaggt 25011556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 27584149 - 27584033
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| | | |||||| ||||| |||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  27584149 ctccaactttctttgtagcaagccaaaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaacacatttcctgcaga 27584052  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  27584051 ttttgccaaggatttaggt 27584033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 27460675 - 27460791
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||| |||||| ||||| |||||||||||| ||||||       |||||||||||| |||||||||||||||||||||    
T  27460675 ctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcttgcggattttt--gtgtaaattccgaaggaaacacatttcctgcaga 27460772  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  27460773 ttttgccaaggatttaggt 27460791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 14727297 - 14727425
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnng----------tgtaaattccgcaggaaacacat 303  Q
    ||||||||||||||||| |||||||| |||||| ||||| |||||||||||||||||||       |          |||||||||||||||||||||||    
T  14727297 ctccaactttctttgtagcaagtccaaccattactagaatttttagcttttcctgcggatttacctgcggagttttgtgtaaattccgcaggaaacacat 14727396  T
Q  304 ttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||||||||||    
T  14727397 ttcctgcagattttgccaaggatttaggt 14727425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 214 - 338
Target Start/End: Complemental strand, 44238995 - 44238872
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||||||||||||||  ||| |||||||||| ||||| |||||||||||| ||||||        ||||||||| |||||||||||||||| || |||    
T  44238995 ctccaactttctttgtagaaagcccagccattactagaaattttagcttttcttgcggattttttt-tgtaaattctgcaggaaacacatttcttgtaga 44238897  T
Q  314 ttttgccaaggatttaggtccctag 338  Q
    ||||||||||||||||||| |||||    
T  44238896 ttttgccaaggatttaggttcctag 44238872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 25007443 - 25007559
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||       |||||||||||||| ||||   ||||||||||||    
T  25007443 ctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaagaaatgtatttcctgcaga 25007540  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  25007541 ttttgccaaggatttaggt 25007559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 31844692 - 31844640
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31844692 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 31844640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 180 - 330
Target Start/End: Complemental strand, 48940598 - 48940438
Alignment:
Q  180 gggcggagccaacccccagctagcttgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga------- 272  Q
    |||||||||||  ||||||||||| ||||| || ||||||| ||||||||| |||| | |||||||| ||||| |||||||||||||||||||           
T  48940598 gggcggagccactccccagctagcctgggctcagctccaacattctttgtagcaagccaagccattactagaacttttagcttttcctgcggatttattt 48940499  T
Q  273 ---nnnnnnngtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttag 330  Q
              ||||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  48940498 gcggatttttgtgtaaattccgcaggaaacacatttcatgcagattttgtcaaggatttag 48940438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 211 - 315
Target Start/End: Original strand, 4773983 - 4774085
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgc 310  Q
    ||||||||| ||| |||||| |||| |||||||||| ||||| |||||||||||||||||||        ||||||||||||||||||||||||||||||    
T  4773983 caactccaattttttttgtagcaagcccagccattactagaacttttagcttttcctgcggatattta--tgtaaattccgcaggaaacacatttcctgc 4774080  T
Q  311 agatt 315  Q
    |||||    
T  4774081 agatt 4774085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 498
Target Start/End: Original strand, 14727419 - 14727557
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||| | | ||||||||||| ||||  | ||||| ||||||||||||||||||||||| ||||| |||||||||||      
T  14727419 tttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttgcgataatt 14727517  T
Q  459 nnnnnacctagactctatataattcctggctccgccactg 498  Q
          || || ||||||| |||| |||||||||||||||    
T  14727518 tttttgcccaggctctataaaatttctggctccgccactg 14727557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 6331729 - 6331781
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6331729 gtgtaaattccgcaggaaacacatttcctacagattttgccaaggatttaggt 6331781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 413 - 498
Target Start/End: Complemental strand, 31844614 - 31844529
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    |||||||||||||||||||||||||| |||||||||||||||||        || |||||||||| ||||||||||||||||||||    
T  31844614 aaatgtgaaattattcgcaggaaggaagtaacattttgcgataaattttttgcccagactctataaaattcctggctccgccactg 31844529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 37154126 - 37154010
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||||||||||||||  |||  |  |||||| ||||| |||||||||||||||||||       |||||||||||||||||||   ||||||||||||    
T  37154126 ctccaactttctttgtaggaagctctaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaatgtatttcctgcaga 37154029  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  37154028 ttttgccaaggatttaggt 37154010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 44305391 - 44305507
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||||||||||||||  ||| ||  | |||| ||||| |||||||||||||||||||       |||||||||||||||||||   ||||||||||||    
T  44305391 ctccaactttctttgtaggaagccctacaattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaatgtatttcctgcaga 44305488  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  44305489 ttttgccaaggatttaggt 44305507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 499
Target Start/End: Complemental strand, 1428445 - 1428306
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | |||||||||| |||| |  | ||||||||||||||||||| |||||||| ||||| ||||||| |||      
T  1428445 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatctat-ctgcagaaaatgtgaaattattcgtaggaaggaagtaacgttttgcggtaaat 1428347  T
Q  459 nnnnnacctagactctatataattcctggctccgccactga 499  Q
          || || ||||||| ||||||||||||||| |||||    
T  1428346 tttttgcccaggctctataaaattcctggctccgctactga 1428306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 499
Target Start/End: Original strand, 44305501 - 44305640
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||| ||||||||||||||||| | ||||||||||  ||||  | ||||| |||||||||||||| |||||||| ||||| |||||||||||      
T  44305501 tttaggttccacaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataatt 44305599  T
Q  459 nnnnnacctagactctatataattcctggctccgccactga 499  Q
          || || ||||||| |||||||||||||||||||||    
T  44305600 tttttgcccaggctctataaaattcctggctccgccactga 44305640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 214 - 269
Target Start/End: Original strand, 49898394 - 49898449
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgc 269  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  49898394 ctccaactttctttgtaacaagttcagccattactagaagttttagcttttcctgc 49898449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 498
Target Start/End: Original strand, 25007553 - 25007691
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| || |||||||||||||||||| | ||||||||||  ||||  | ||||| |||||||||||||| |||||||| ||||| |||||||||||      
T  25007553 tttaggttctgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataaat 25007651  T
Q  459 nnnnnacctagactctatataattcctggctccgccactg 498  Q
          || || ||||||| ||||||||||||||||||||    
T  25007652 tttttgcccaggctctataaaattcctggctccgccactg 25007691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 413 - 492
Target Start/End: Original strand, 49898530 - 49898609
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccg 492  Q
    ||||||||||||||||||||||||||||||||||||||||||||        || ||||||||||||||| |||||||||    
T  49898530 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataaattttttgcccagactctatataatttctggctccg 49898609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 495
Target Start/End: Complemental strand, 37154016 - 37153881
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||| ||||||||||||||||| | ||||||||||  ||||  | ||||| |||||||||||||| |||||||| ||||| |||||||||||      
T  37154016 tttaggttccacaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataaat 37153918  T
Q  459 nnnnnacctagactctatataattcctggctccgcca 495  Q
          || || ||||||| |||||||||||||||||    
T  37153917 tttttgcccaggctctataaaattcctggctccgcca 37153881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 383 - 498
Target Start/End: Original strand, 4774085 - 4774199
Alignment:
Q  383 tccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataatt 482  Q
    |||||| ||||||||||| ||||| |  |||| ||||||||||||||||||||| | |||||||||||||||||        || |||||||||| ||||    
T  4774085 tccgcaggaaatgtgaaattatccgcaagaaa-tgtgaaattattcgcaggaagaaagtaacattttgcgataatttttttgcccagactctataaaatt 4774183  T
Q  483 cctggctccgccactg 498  Q
     |||||||||||||||    
T  4774184 tctggctccgccactg 4774199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 22 - 125
Target Start/End: Complemental strand, 4677665 - 4677562
Alignment:
Q  22 acagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgc 121  Q
    |||||||||| ||||||||  || | ||| || |||||||||| |||||  ||||||||||  ||| | ||||||||| ||||||||||| |||||||||    
T  4677665 acagtgttttcagagttggtggcagattgattcttagcagcattaccaatcaacctttgatcatcagtaaaagcaacaaaagaaggtgttgttttgttgc 4677566  T
Q  122 cttg 125  Q
    ||||    
T  4677565 cttg 4677562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 497
Target Start/End: Complemental strand, 33468944 - 33468860
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccact 497  Q
    |||||||||||||||||||||||||| ||||| |||||||||||        || || ||||||| |||||||||||||||||||    
T  33468944 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgccact 33468860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 359 - 436
Target Start/End: Complemental strand, 27584039 - 27583963
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaag 436  Q
    |||||| ||| ||||||||||||||||| | ||||||||||| ||||  | || ||||||||||||||||||||||||    
T  27584039 tttaggttccccaggaaagatatatccgtaggaaatgtgaaattatctgcagg-aaatgtgaaattattcgcaggaag 27583963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 8239334 - 8239388
Alignment:
Q  280 gtgtaaattccgcaggaaacacat--ttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||||||||| | ||  |||||||||||||||||||||||||||||    
T  8239334 gtgtaaattccgcaggaaatatatatttcctgcagattttgccaaggatttaggt 8239388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 361 - 436
Target Start/End: Complemental strand, 44238865 - 44238791
Alignment:
Q  361 taggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaag 436  Q
    ||||||| ||| |||||||||||||||| ||||||||||| ||||| | || |||||||||| |||||||| ||||    
T  44238865 taggatctgcaagaaagatatatccgcatgaaatgtgaaattatccgcagg-aaatgtgaaaatattcgcatgaag 44238791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 25011562 - 25011467
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||| ||||||||||||| | ||||||||||| ||||  | | ||||||  |||||||||||| |||||| ||||| |||||||||||    
T  25011562 tttaggttccgcag-aaagatatatccgtaggaaatgtgaaattatctgcag-aaaatgcaaaattattcgcatgaaggaagtaacgttttgcgataa 25011467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 499 - 568
Target Start/End: Complemental strand, 34465226 - 34465157
Alignment:
Q  499 actgcaacacaagagtatgttgtgccgaggtctactcccacaacaagtccttcatatttcctcgccatga 568  Q
    ||||||||||| ||||| |||||||| ||||||| ||||||| || |||||||| ||||  |||||||||    
T  34465226 actgcaacacatgagtaggttgtgccaaggtctattcccacagcacgtccttcacattttttcgccatga 34465157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 27460821 - 27460864
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| ||||  |||||||||||    
T  27460821 aaatgtgaaattattcgcaggaaggaagtaatgttttgcgataa 27460864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 293 - 332
Target Start/End: Complemental strand, 33469009 - 33468970
Alignment:
Q  293 aggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  33469009 aggaaacacatttcctgcaaattttgtcaaggatttaggt 33468970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 313 - 379
Target Start/End: Original strand, 4163481 - 4163546
Alignment:
Q  313 attttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||||||||||||||||||  | ||||||| ||||||||||| |||||| ||||| || |||||||    
T  4163481 attttgccaaggatttaggtttc-aggtgagataataccttagaattttatgatccacatgaaagat 4163546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 33469077 - 33469019
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||||||||||| || ||| | || |||||| ||||| |||||||||||||||||||    
T  33469077 ctccaactttctttatagcaaattcaaccattactagaaattttagcttttcctgcgga 33469019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 303 - 332
Target Start/End: Complemental strand, 1428468 - 1428439
Alignment:
Q  303 tttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||||||||||||||||||||    
T  1428468 tttcctgcagattttgccaaggatttaggt 1428439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 6331775 - 6331816
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||| ||||||||||||||||||||| | |||||||||||    
T  6331775 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaa 6331816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 8239382 - 8239423
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||| ||||||||||||||||||||| | |||||||||||    
T  8239382 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaa 8239423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 31844646 - 31844605
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||| ||||||||||||||||||||| | |||||||||||    
T  31844646 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaa 31844605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 31844771 - 31844710
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| || |||  ||| |||||| ||||| |||||||||||||| ||||    
T  31844771 caactccaactttctttctagcaaacccaaccattactagaaattttagcttttcctacgga 31844710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 468 - 500
Target Start/End: Original strand, 42817793 - 42817825
Alignment:
Q  468 agactctatataattcctggctccgccactgac 500  Q
    |||||||||| ||||||||||||||||||||||    
T  42817793 agactctataaaattcctggctccgccactgac 42817825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 1e-55; HSPs: 20)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 214 - 456
Target Start/End: Complemental strand, 34283033 - 34282790
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||||||||| ||||| ||||| |||||||||||| ||||||       |||||||||| |||||||||||||||||||||||    
T  34283033 ctccaactttctttgtagcaagtccagtcattactagaacttttagcttttcttgcggatttta--gtgtaaattctgcaggaaacacatttcctgcaga 34282936  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa---gata-tatccgcaagaaatgtgaaactatccacc 409  Q
    |||||||||||||||| || || ||||||||||||||| ||||||||||||||||||||||||   || | |||||||| ||||||||||| |||   |     
T  34282935 ttttgccaaggatttaagttccgaggtgaggtaataccataggattttaggatccgcaggaaatgtgaaattatccgcatgaaatgtgaaattatttgca 34282836  T
Q  410 ggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    || |||||||||||||||||||||||||| ||||| || ||||||||    
T  34282835 gg-aaatgtgaaattattcgcaggaaggaagtaacgttgtgcgataa 34282790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 178 - 456
Target Start/End: Original strand, 13243024 - 13243316
Alignment:
Q  178 gggggcggagccaacccccagctagcttgggcac--aactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannn 275  Q
    ||||||||||||| |||||||||||| |||||||  | |||||||||| |||||| |||| |||||||||| ||||| |||||||||||||||| ||       
T  13243024 gggggcggagcca-cccccagctagcctgggcactcacctccaactttttttgtagcaagcccagccattattagaacttttagcttttcctgcagattt 13243122  T
Q  276 nnnng----------tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttagga 365  Q
        |          ||||||||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||||    
T  13243123 atctgcggagttttgtgtaaattccgcaggaaacacatttcctgtagattttgccaaggatttaggttcccaggtgaggtaataccttaggattttagga 13243222  T
Q  366 tccgcaggaaa---gata-tatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||   || | |||||||| ||||||||||| ||| | ||  |||||||||||||||| ||| |||  | ||||| |||| ||||||    
T  13243223 tccgcaagaaatgtgaaattatccgcaggaaatgtgaaattat-ctccacaaaatgtgaaattattggcaagaaaaaagtaacgttttacgataa 13243316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 280 - 424
Target Start/End: Complemental strand, 39431734 - 39431591
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||| ||||||||| ||| ||||| |||||||    
T  39431734 gtgtaaattccgtaggaaacacatttcgtgcagattttgccaaagatttaggttcctaggtgaggtaataccataggattttcggacccgcaagaaagat 39431635  T
Q  380 atatccgcaagaaatgtgaaactatccaccggaaaatgtgaaatt 424  Q
    ||||||||| ||||||||||| |||| || || ||||||||||||    
T  39431634 atatccgcatgaaatgtgaaattatctacagg-aaatgtgaaatt 39431591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 24965012 - 24965128
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  24965012 ctccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaacacatttcctgcaga 24965109  T
Q  314 ttttgccaaggatttaggt 332  Q
    ||||||| |||||||||||    
T  24965110 ttttgcctaggatttaggt 24965128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 28928038 - 28928155
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacattt-cctgcag 312  Q
    ||||||||||||||||| |||| | | |||||| ||||| |||||||||||||||||||       |||||||||||||||||||||||||| |||||||    
T  28928038 ctccaactttctttgtagcaagcctaaccattactagaatttttagcttttcctgcggagtttt--gtgtaaattccgcaggaaacacatttccctgcag 28928135  T
Q  313 attttgccaaggatttaggt 332  Q
    ||||||||||||||||||||    
T  28928136 attttgccaaggatttaggt 28928155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 498
Target Start/End: Original strand, 28928149 - 28928287
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||| | | ||||||||||| ||||  | | ||||||||||||||||||||||||||| ||||| |||| ||||||      
T  28928149 tttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgcag-aaaatgtgaaattattcgcaggaaggaagtaactttttacgataaat 28928247  T
Q  459 nnnnnacctagactctatataattcctggctccgccactg 498  Q
         ||| ||||||| || ||||||||||||||||||||    
T  28928248 tttttacccagactctttaaaattcctggctccgccactg 28928287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 281 - 396
Target Start/End: Complemental strand, 31500902 - 31500781
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtc------cctaggtgaggtaataccttaggattttaggatccgcagga 374  Q
    ||||||||| |||||||||||||||||| | |||||||||||||||||| ||       || |||||||||||||||||||||||||||||||||  |||    
T  31500902 tgtaaattctgcaggaaacacatttcctacggattttgccaaggatttatgtttagattccaaggtgaggtaataccttaggattttaggatccgttgga 31500803  T
Q  375 aagatatatccgcaagaaatgt 396  Q
    ||||||||| || | |||||||    
T  31500802 aagatatatacgtaggaaatgt 31500781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 366 - 497
Target Start/End: Complemental strand, 36406508 - 36406378
Alignment:
Q  366 tccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnac 465  Q
    ||||||||||||||||||||| | ||||||||||| ||||  |  | |||||||||||||||||||||||||| ||||| |||||||||||        |    
T  36406508 tccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaag-aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgc 36406410  T
Q  466 ctagactctatataattcctggctccgccact 497  Q
    | || ||||||| |||||||||||||||||||    
T  36406409 ccaggctctataaaattcctggctccgccact 36406378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 214 - 320
Target Start/End: Complemental strand, 27321986 - 27321882
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||| |||||||||| |||| |||||||||| || || |||||| ||||||||||||        ||||||||||||||||||||||||||||||| |    
T  27321986 ctccaattttctttgtagcaagcccagccattactaaaacttttagtttttcctgcggattttta--tgtaaattccgcaggaaacacatttcctgcaaa 27321889  T
Q  314 ttttgcc 320  Q
    |||||||    
T  27321888 ttttgcc 27321882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 38214738 - 38214850
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||| |||||||||| |||||||||||| || ||||| |||||||||||||||||||        ||||||||| |||  ||||||||||||||||||    
T  38214738 ctccaattttctttgtagcaagtccagccaatactagaacttttagcttttcctgcggattttta--tgtaaattctgcataaaacacatttcctgcaga 38214835  T
Q  314 ttttgccaaggattt 328  Q
    ||||| | |||||||    
T  38214836 ttttgtctaggattt 38214850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 36406561 - 36406509
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||    
T  36406561 gtgtaaattccgtaggaaacacatttcctgcagattttgccaaggattgaggt 36406509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 3384045 - 3383949
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||||| | ||||||||||  ||||  | || ||| ||||||||||||| |||||||| ||||| |||||||||||    
T  3384045 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcagg-aaacgtgaaattattcgtaggaaggaagtaacgttttgcgataa 3383949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 411 - 456
Target Start/End: Complemental strand, 27321837 - 27321792
Alignment:
Q  411 gaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  27321837 gaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 27321792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 12529914 - 12529966
Alignment:
Q  91 aaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttc 143  Q
    ||||||||||||||||||||| ||||||| |||||||| |||||||| |||||    
T  12529914 aaagcaacacaagaaggtgttgttttgtttccttgatcattgtgaattatttc 12529966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 38214868 - 38214911
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    ||||||||||||||||||||||| || |||||||||||||||||    
T  38214868 aaatgtgaaattattcgcaggaatgaagtaacattttgcgataa 38214911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 3384167 - 3384109
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||||||  |||||| ||||| ||||||||||| |||||||    
T  3384167 ctccaactttctttgtagcaagtcctaccattattagaatttttagctttttctgcgga 3384109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 21138130 - 21138078
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||| |||| ||||||| ||||||||  ||||||||||||||||||||    
T  21138130 gtgtaaatttcgcatgaaacacgtttcctgcgaattttgccaaggatttaggt 21138078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 468 - 501
Target Start/End: Original strand, 34845641 - 34845674
Alignment:
Q  468 agactctatataattcctggctccgccactgact 501  Q
    |||||||||||||||||||||||| |||||||||    
T  34845641 agactctatataattcctggctccaccactgact 34845674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 148
Target Start/End: Original strand, 43745804 - 43745924
Alignment:
Q  25 gtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgcctt 124  Q
    |||||||||| |||||  |||| ||| || |||||||| ||||| |  ||||||| ||  ||| | ||||||||| |||||| ||||   ||||||||||    
T  43745804 gtgttttgagggttggtggcggtttgattcttagcagcgtcacctatcaacctttcatgatcagtaaaagcaacaaaagaagttgtt---ttgttgcctt 43745900  T
Q  125 gatcgttgtgaatgatttcaactc 148  Q
    |||| |||||||| || |||||||    
T  43745901 gatcattgtgaataatctcaactc 43745924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 350 - 406
Target Start/End: Original strand, 17845206 - 17845262
Alignment:
Q  350 ccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatcc 406  Q
    |||| |||| |||||||||||| ||||| ||||||||||  |||||||||| |||||    
T  17845206 ccttgggatcttaggatccgcaagaaaggtatatccgcagaaaatgtgaaaatatcc 17845262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 9e-50; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 280 - 456
Target Start/End: Complemental strand, 2522003 - 2521828
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||||| |||||||||||||||||||||| |||||||  ||||||||||||| || ||||||||||||| ||||||||||||||||||||||||||||     
T  2522003 gtgtaaagtccgcaggaaacacatttcctgtagattttatcaaggatttaggttcccaggtgaggtaatatcttaggattttaggatccgcaggaaagac 2521904  T
Q  380 atatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||  |||||||| | ||||| | || |||||||||||||||||||||||||| ||||| |||| ||||||    
T  2521903 atatccgcagaaaatgtgatattatccgcagg-aaatgtgaaattattcgcaggaaggaagtaacgttttacgataa 2521828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 214 - 456
Target Start/End: Original strand, 49745019 - 49745242
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||||||||||| ||||||||| |||||||| ||||||||||| |||||||||  ||       |||||||||||| ||||||||||||| |||||||    
T  49745019 ctccaactttctttataacaagtctagccattactagaagttttaccttttcctgtagattttt--gtgtaaattccgtaggaaacacattttctgcaga 49745116  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaa 413  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||                 ||||||| ||||| | | ||    
T  49745117 ttttgccaaggatttaggttcctaggtgaggtaataccttaggattttaggatccgcaggaaa-----------------tgtgaaattatccgcagaaa 49745199  T
Q  414 aatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    ||||| |||||||||||||||||||||||||||||| ||||||    
T  49745200 aatgtaaaattattcgcaggaaggacgtaacattttacgataa 49745242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 280 - 400
Target Start/End: Original strand, 25237620 - 25237740
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||||||||    
T  25237620 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttcccaggtgaggtaataccttatgattttaggattcgcaggaaagat 25237719  T
Q  380 atatccgcaagaaatgtgaaa 400  Q
     |||||||| |||||||||||    
T  25237720 gtatccgcaggaaatgtgaaa 25237740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 199 - 372
Target Start/End: Complemental strand, 41972588 - 41972417
Alignment:
Q  199 ctagcttgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaa 298  Q
    ||||||| ||| || ||||||||||||||||| |||| | | |||||| ||||| |||||||||||||||||||       |||||||||||||||||||    
T  41972588 ctagcttaggctcagctccaactttctttgtagcaagccgaaccattactagaacttttagcttttcctgcggattttt--gtgtaaattccgcaggaaa 41972491  T
Q  299 cacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcag 372  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||||||| |||| |||||||||||||||||    
T  41972490 cacatttcctgcagattttgccaaggattaaggttcccaggtgaggtaatatcttaagattttaggatccgcag 41972417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 211 - 456
Target Start/End: Original strand, 50099817 - 50100056
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgc 310  Q
    ||||||||||||||||||||  |||| || |||||| ||||  ||||||||||| |||||||       |||||||||||| ||||||  ||||| ||||    
T  50099817 caactccaactttctttgtagtaagttcaaccattactagagcttttagctttttctgcggattttt--gtgtaaattccgtaggaaattcattttctgc 50099914  T
Q  311 agattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccg 410  Q
    | ||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||    | ||||||  ||| ||||||||||| ||||| | |    
T  50099915 aaattttgctaaggatttaggttcccaggtgaagtaataccttaggattttaggatccgcat---atatatatttgcaggaaatgtgaaattatccgcag 50100011  T
Q  411 gaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||| |||||||||||||| |||||||| ||||| |||||||||||    
T  50100012 gaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataa 50100056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 214 - 400
Target Start/End: Original strand, 8901783 - 8901966
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||||||||||||||  ||| |||||||||  ||||| ||||| |||||||||| ||       ||||||| ||||||||||||||||||||||||||    
T  8901783 ctccaactttctttgtagaaagcccagccatttttagaacttttaacttttcctgcagattttt--gtgtaaactccgcaggaaacacatttcctgcaga 8901880  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    ||||||||||||||||| |  | | |||||||||||||||||||||||||||||| | ||||||||| |||||||  ||||||||||    
T  8901881 ttttgccaaggatttagatttcca-gtgaggtaataccttaggattttaggatccacgggaaagatacatccgcagtaaatgtgaaa 8901966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 22 - 176
Target Start/End: Original strand, 35133431 - 35133585
Alignment:
Q  22 acagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgc 121  Q
    |||||||||| | | |||||||| ||||| || |||||||||||||| |  ||||||||||  | | ||||||||| ||||||||||||| |||||||||    
T  35133431 acagtgttttcaaaattggcagcagcttgattcttagcagcatcaccgatcaacctttgatccttagtgaaagcaatacaagaaggtgttgttttgttgc 35133530  T
Q  122 cttgatcgttgtgaatgatttcaactcgagagtgttgttccagccacactgcaac 176  Q
     ||||||||||||||||||||| |||||| ||||||||||  |||| ||||||||    
T  35133531 tttgatcgttgtgaatgatttcgactcgatagtgttgttcttgccatactgcaac 35133585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 31364115 - 31364231
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||| |||| |||||| ||||| |||||| ||||||||||||       ||||||||||||||||||||||||||||||||||    
T  31364115 ctccaactttctttgtagcaaatccaaccattactagaaattttagtttttcctgcggattttt--gtgtaaattccgcaggaaacacatttcctgcaga 31364212  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  31364213 ttttgccaaggatttaggt 31364231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 283 - 375
Target Start/End: Original strand, 36947565 - 36947657
Alignment:
Q  283 taaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaa 375  Q
    ||||||| |||||||||| ||||||||| |||||||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||    
T  36947565 taaattctgcaggaaacatatttcctgcggattttgccaagaatttaggttcccaggtgtggtaataccttaggattttaggatccgcaggaa 36947657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 280 - 499
Target Start/End: Original strand, 52373782 - 52373983
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||||||||||||| ||||  ||||| ||||||||||| || |||||||||| || ||||||||||||||||||||||||||||                   
T  52373782 gtgtaaattccgcagaaaacgtatttcttgcagattttgtcagggatttaggttcccaggtgaggtaataccttaggattttagg--------------- 52373866  T
Q  380 atatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatata 479  Q
      ||||||| ||||||||||| ||||| | || |||||||||||||||||||||||||| ||||| |||||||||||        |  |||||||||| |    
T  52373867 --atccgcatgaaatgtgaaattatccgcagg-aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcacagactctataaa 52373963  T
Q  480 attcctggctccgccactga 499  Q
    ||||||||||||||||||||    
T  52373964 attcctggctccgccactga 52373983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 10715634 - 10715752
Alignment:
Q  214 ctccaactttctttgtaa-caagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcc-tgca 311  Q
    |||||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||       ||||||||||||||||||||||||| || ||||    
T  10715634 ctccaactttctttgtaagcaagcccaaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaacacattgccctgca 10715731  T
Q  312 gattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||    
T  10715732 gattttgccaaggatttaggt 10715752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 10929404 - 10929522
Alignment:
Q  214 ctccaactttctttgtaa-caagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcc-tgca 311  Q
    |||||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||       ||||||||||||||||||||||||| || ||||    
T  10929404 ctccaactttctttgtaagcaagcccaaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaacacattgccctgca 10929501  T
Q  312 gattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||    
T  10929502 gattttgccaaggatttaggt 10929522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 214 - 326
Target Start/End: Original strand, 50383868 - 50383978
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||||||||||||||||||       | |||||||  |||||||||||||||||||||||    
T  50383868 ctccaactttctttgtagcaagcccagccattactagaacttttagcttttcctgcgga--tgtttgcgtaaattttgcaggaaacacatttcctgcaga 50383965  T
Q  314 ttttgccaaggat 326  Q
    |||||||||||||    
T  50383966 ttttgccaaggat 50383978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 4552165 - 4552281
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||       |||||||||||||||||||   ||||||||||||    
T  4552165 ctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggatttgt--gtgtaaattccgcaggaaatgtatttcctgcaga 4552262  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  4552263 ttttgccaaggatttaggt 4552281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 359 - 498
Target Start/End: Original strand, 46645693 - 46645831
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| |  |||| ||||| |||  || ||||| ||||||||||||||||||||||| ||||| |||||||||||      
T  46645693 tttaggttccgcaggaaagatatatccgtagaaaatatgaaattatatacaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttgcgataaat 46645791  T
Q  459 nnnnnacctagactctatataattcctggctccgccactg 498  Q
          || |||||||||| ||||||||||||||||||||    
T  46645792 ttttttcccagactctataaaattcctggctccgccactg 46645831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 217 - 332
Target Start/End: Original strand, 40969207 - 40969320
Alignment:
Q  217 caactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcagattt 316  Q
    |||||||||||||| |||||||| ||||||  |||| |||||||||||||||||||       |||||||||| ||||||||||||||| ||||||||||    
T  40969207 caactttctttgtagcaagtccaaccattatgagaatttttagcttttcctgcggattttt--gtgtaaattctgcaggaaacacattttctgcagattt 40969304  T
Q  317 tgccaaggatttaggt 332  Q
    || ||| |||||||||    
T  40969305 tgtcaatgatttaggt 40969320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 359 - 498
Target Start/End: Original strand, 4552275 - 4552413
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||  ||||  | || ||||||||||||||| | |||||||| ||||| |||||||||||      
T  4552275 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcagg-aaatgtgaaattatttgtaggaaggaagtaacgttttgcgataaat 4552373  T
Q  459 nnnnnacctagactctatataattcctggctccgccactg 498  Q
          || |||||||||| ||||||||||||||||||||    
T  4552374 tttttgcccagactctataaaattcctggctccgccactg 4552413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 282 - 332
Target Start/End: Original strand, 4728604 - 4728654
Alignment:
Q  282 gtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4728604 gtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 4728654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 10715746 - 10715842
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||  | ||||| ||||||||||||||||||||||| ||||  |||||||||||    
T  10715746 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaatgttttgcgataa 10715842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 10929516 - 10929612
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||  | ||||| ||||||||||||||||||||||| ||||  |||||||||||    
T  10929516 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaatgttttgcgataa 10929612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 359 - 498
Target Start/End: Original strand, 4728648 - 4728786
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||| | | ||||||||||| ||||  | | |||||||||||||||| |||||||||| ||||| |||||||||||      
T  4728648 tttaggttccgcaggaaagatatatctgtaggaaatgtgaaattatctgcag-aaaatgtgaaattatttgcaggaaggaagtaacgttttgcgataaat 4728746  T
Q  459 nnnnnacctagactctatataattcctggctccgccactg 498  Q
          || || ||||||| ||||||| ||||||||||||    
T  4728747 tttttgcccaggctctataaaattcctagctccgccactg 4728786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 22 - 148
Target Start/End: Original strand, 30776094 - 30776220
Alignment:
Q  22 acagtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgc 121  Q
    ||||||||||||| ||||  ||| || ||||  ||||||||| |||| || |||||||||   ||| ||||||||||| |||||||||| |||||| |||    
T  30776094 acagtgttttgagggttgatagcagcctggtccttagcagcagcaccgaccaacctttgaccatcagtgaaagcaacaaaagaaggtgtgattttgctgc 30776193  T
Q  122 cttgatcgttgtgaatgatttcaactc 148  Q
    ||| ||||||||| || ||||||||||    
T  30776194 cttcatcgttgtggataatttcaactc 30776220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 40969314 - 40969410
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||| |  | |||||| ||||||||||||||| ||||| ||||| |||||||||||    
T  40969314 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaattat-ctgcagaaaatatgaaattattcgcagaaaggaagtaacgttttgcgataa 40969410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 2017573 - 2017457
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||||  |  |||||| ||||| |||||||||||||||||||       |||||||||||||||||||   |||||| |||||    
T  2017573 ctccaactttctttgtagcaagctctaccattactagaatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaatgtatttcccgcaga 2017476  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||| ||||||||    
T  2017475 ttttgccaagtatttaggt 2017457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 10058581 - 10058633
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  10058581 gtgtaaattccgcaggaaacacatttccagcagattttaccaaggatttaggt 10058633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 359 - 499
Target Start/End: Complemental strand, 2017463 - 2017324
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||  ||||    ||||| |||||||||||||| |||||||| ||||| |||||||||||      
T  2017463 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgtaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataaat 2017365  T
Q  459 nnnnnacctagactctatataattcctggctccgccactga 499  Q
          || || || |||| |||||||||||||||||||||    
T  2017364 tttttgcccaggctttataaaattcctggctccgccactga 2017324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 9003612 - 9003659
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  9003612 tgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 9003659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 9694144 - 9694191
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  9694144 tgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 9694191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 14044402 - 14044449
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  14044402 tgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 14044449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 9003669 - 9003741
Alignment:
Q  383 tccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||| ||||||  ||||| |||||||||||||||| |||||| |||||||||||||||||    
T  9003669 tccgcaggaaatgtgaaattatccataggaaa-tgtgaaattattcgcaagaaggaagtaacattttgcgataa 9003741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 497
Target Start/End: Original strand, 10058659 - 10058743
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccact 497  Q
    |||||||||||||||||||||||||| ||||| |||||||||||        || || ||||||| |||||||||||||||||||    
T  10058659 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccaggctctataaaattcctggctccgccact 10058743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 31929102 - 31929051
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  31929102 tgtaaattctgcaagaaacacatttcctgcaaattttgccaaggatttaggt 31929051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 498
Target Start/End: Original strand, 32005980 - 32006111
Alignment:
Q  366 tccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnac 465  Q
    ||||||||||||||||||||| | ||||||||||  |||   | ||||| |||||||||||||| |||||||| ||||| |||||||||||        |    
T  32005980 tccgcaggaaagatatatccgtaggaaatgtgaatttatttgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataaattttttgc 32006078  T
Q  466 ctagactctatataattcctggctccgccactg 498  Q
    | |||||||||| ||||| || |||||||||||    
T  32006079 ccagactctataaaattcatgactccgccactg 32006111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 283 - 332
Target Start/End: Original strand, 2576218 - 2576268
Alignment:
Q  283 taaattccgcaggaaacacatttcctgcaga-ttttgccaaggatttaggt 332  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  2576218 taaattccgcaggaaacacatttcctgcagatttttgccaaggatgtaggt 2576268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 456
Target Start/End: Complemental strand, 41972417 - 41972372
Alignment:
Q  411 gaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||    
T  41972417 gaaaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 41972372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 498
Target Start/End: Complemental strand, 11827021 - 11826936
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    |||||||||||||||||||||||||| |||||||||| ||||||        ||||| ||||||| |||| |||||| ||||||||    
T  11827021 aaatgtgaaattattcgcaggaaggaagtaacattttacgataatttttttgcctaggctctataaaatttctggcttcgccactg 11826936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 14044467 - 14044552
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    |||||||||||||||| ||||||||| |||||||||||||||||        || | |||||||| |||| |||||||||||||||    
T  14044467 aaatgtgaaattattctcaggaaggaggtaacattttgcgataatttttttgcccatactctataaaatttctggctccgccactg 14044552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 46645647 - 46645699
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||| |||||||||||||||| ||||||||||||||||  |||||||    
T  46645647 gtgtaaattctgcaggaaacacatttcatgcagattttgccaagagtttaggt 46645699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 31364257 - 31364300
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  31364257 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 31364300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 4728526 - 4728584
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||| | | |||||| ||||| |||||||||||||||||||    
T  4728526 ctccaactttctttgtagcaagccaaaccattactagaatttttagcttttcctgcgga 4728584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 32005894 - 32005952
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||    
T  32005894 ctccaactttctttgtagcaagccctaccattattagaatttttagcttttcctgcgga 32005952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 179 - 262
Target Start/End: Original strand, 34672300 - 34672381
Alignment:
Q  179 ggggcggagccaacccccagctagcttgggcacaactccaactttctttgtaacaagtccagccatta-gtagaagttttagctt 262  Q
    |||||||| ||| ||||||||||||  || | || |||||||||||||||||||||||||||  |||| ||||||||||||||||    
T  34672300 ggggcggaaccaccccccagctagccagg-ctcagctccaactttctttgtaacaagtccag--attaggtagaagttttagctt 34672381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 361 - 498
Target Start/End: Original strand, 2576264 - 2576400
Alignment:
Q  361 taggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnn 460  Q
    |||| ||||||||||| ||||||||| | ||||||| ||| ||||  | | ||||| |||||||| |||||| ||||| ||||| |||||||||||        
T  2576264 taggttccgcaggaaatatatatccgtaggaaatgtaaaattatctgcag-aaaatatgaaattaatcgcagaaaggaagtaacgttttgcgataatttt 2576362  T
Q  461 nnnacctagactctatataattcctggctccgccactg 498  Q
        || ||||| |||| ||||| ||||||||||||||    
T  2576363 tttgcccagactttataaaattcttggctccgccactg 2576400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 15034606 - 15034554
Alignment:
Q  217 caactttctttgtaacaagtccagccattagtagaagttttagcttttcctgc 269  Q
    ||||||||||||||||||| ||| |||||| ||||| |||| |||||||||||    
T  15034606 caactttctttgtaacaagcccaaccattactagaacttttcgcttttcctgc 15034554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 498
Target Start/End: Original strand, 25237731 - 25237816
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||        || |  ||||||||||||||| ||||||||||||    
T  25237731 aaatgtgaaattattcgcaggaaggaagtaacgttttgtgataaaaaatttgcccatgctctatataattcctagctccgccactg 25237816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 350 - 392
Target Start/End: Original strand, 6017211 - 6017253
Alignment:
Q  350 ccttaggattttaggatccgcaggaaagatatatccgcaagaa 392  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||    
T  6017211 ccttatgattttaggatccgtaggaaaggtatatccgcaagaa 6017253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 11827162 - 11827104
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| ||||||||||  ||||| |||||||| ||||| ||||||||||| |||||||    
T  11827162 ctccaattttctttgtagtaagtctagccattactagaacttttagctttttctgcgga 11827104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 25237544 - 25237602
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||||||||||||||  |||||||| ||||| ||||| ||||||| ||| |||||||    
T  25237544 ctccaactttctttgtagtaagtccagtcattactagaacttttagcgttttctgcgga 25237602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 46645571 - 46645629
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||| ||||||| |||| ||| |||||| ||||| ||||||||||| |||||||    
T  46645571 ctccaacttcctttgtagcaagcccaaccattactagaatttttagctttttctgcgga 46645629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 359 - 400
Target Start/End: Original strand, 10058627 - 10058668
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||| ||||||||||||||||||||| | |||||||||||    
T  10058627 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaa 10058668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 269
Target Start/End: Original strand, 1585692 - 1585744
Alignment:
Q  217 caactttctttgtaacaagtccagccattagtagaagttttagcttttcctgc 269  Q
    |||||||||||||| |||| ||  |||||| ||||| ||||||||||||||||    
T  1585692 caactttctttgtagcaagccctaccattactagaatttttagcttttcctgc 1585744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 2576139 - 2576195
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcg 270  Q
    ||||||||||||||||| |||| ||| ||||||  |||| ||||||||||| |||||    
T  2576139 ctccaactttctttgtagcaagcccaaccattacaagaatttttagctttttctgcg 2576195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 41955269 - 41955321
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||| ||||||||||  |||||| | ||||| |||||||||||||||    
T  41955269 gtgtaaattcagcaggaaacatgtttcctacggatttcgccaaggatttaggt 41955321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 97; Significance: 2e-47; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 280 - 444
Target Start/End: Complemental strand, 2836272 - 2836109
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||||||||||||  |    
T  2836272 gtgtaaattccgcaggaaatacatttcctgcagattttgtcaaggatttaggttcccaggtgaggtaataccataggattttaggatccgcaggaaaagt 2836173  T
Q  380 atatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaac 444  Q
    |||||  || ||||||||||| ||||  | || |||||||||||||||||||||||||| |||||    
T  2836172 atatcgacaggaaatgtgaaattatctgcagg-aaatgtgaaattattcgcaggaaggaagtaac 2836109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 211 - 332
Target Start/End: Complemental strand, 34249152 - 34249033
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgc 310  Q
    |||||||||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||       |||||||||| ||||||||||||||||||||    
T  34249152 caactccaactttctttgtagcaagcccaaccattactagaatttttagcttttcctgcggattttt--gtgtaaattctgcaggaaacacatttcctgc 34249055  T
Q  311 agattttgccaaggatttaggt 332  Q
    |||||||||||||| |||||||    
T  34249054 agattttgccaagggtttaggt 34249033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 343 - 449
Target Start/End: Complemental strand, 31200199 - 31200094
Alignment:
Q  343 ggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgta 442  Q
    ||||||||||||||||||||| ||||||||| |||||||||| ||| ||||||||||| |||||   ||||||||||||||||||||||||||||| |||    
T  31200199 ggtaataccttaggattttagaatccgcaggtaagatatatctgcaggaaatgtgaaattatcc-gtggaaaatgtgaaattattcgcaggaaggaagta 31200101  T
Q  443 acatttt 449  Q
    || ||||    
T  31200100 acgtttt 31200094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 214 - 329
Target Start/End: Complemental strand, 23663895 - 23663782
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||| |||||  || || |||||||||||||||||||       ||||||||||||||||||||||||||||||||||    
T  23663895 ctccaactttctttgtagcaagcccaaccattgctataatttttagcttttcctgcggattttt--gtgtaaattccgcaggaaacacatttcctgcaga 23663798  T
Q  314 ttttgccaaggattta 329  Q
    ||||||||||||||||    
T  23663797 ttttgccaaggattta 23663782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 343 - 456
Target Start/End: Complemental strand, 31188354 - 31188242
Alignment:
Q  343 ggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgta 442  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  |||| ||||| |||||    |||||||||||||||||| ||||||||| |||    
T  31188354 ggtaataccttaggattttaggatccgcaggaaagatatatcctcagaaaatttgaaattatcc-gtagaaaatgtgaaattattcacaggaaggaagta 31188256  T
Q  443 acattttgcgataa 456  Q
    || |||||||||||    
T  31188255 acgttttgcgataa 31188242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 10397928 - 10397812
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||  ||| ||||||  |||| |||||||||||||||||||       |||||||||||||||||||||||||||||||| |    
T  10397928 ctccaactttctttgtagcaaacccaaccattacgagaatttttagcttttcctgcggattgtt--gtgtaaattccgcaggaaacacatttcctgcata 10397831  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  10397830 ttttgccaaggatttaggt 10397812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 332
Target Start/End: Complemental strand, 1781158 - 1781042
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||  ||| |||||| || || ||||||||||||||| |||       ||||||||||| ||||||||||||||||||||||    
T  1781158 ctccaactttctttgtagcaaacccaaccattactataaattttagcttttcctgtggattttt--gtgtaaattcctcaggaaacacatttcctgcaga 1781061  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  1781060 ttttgccaaggatttaggt 1781042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 218 - 349
Target Start/End: Original strand, 339319 - 339448
Alignment:
Q  218 aactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcagatttt 317  Q
    ||||||||||||| |||   ||||||||| || || ||||||||||||||| |||       |||||||||||| |||||| ||||||||||||||||||    
T  339319 aactttctttgtagcaaactcagccattactaaaacttttagcttttcctgtggattttt--gtgtaaattccgtaggaaatacatttcctgcagatttt 339416  T
Q  318 gccaaggatttaggtccctaggtgaggtaata 349  Q
     |||||||||||||| || |||||||||||||    
T  339417 accaaggatttaggttcccaggtgaggtaata 339448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 359 - 456
Target Start/End: Original strand, 9696145 - 9696241
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||  | ||||| ||||||||||||||||||||||| ||||| |||||||||||    
T  9696145 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaaggaagtaacgttttgcgataa 9696241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 2941266 - 2941318
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2941266 gtgtaaatttcgcaggaaacacatttcctgcagattttgccaaggatttaggt 2941318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 280 - 332
Target Start/End: Original strand, 9696099 - 9696151
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9696099 gtgtaaattccgcaggaaacatatttcctgcagattttgccaaggatttaggt 9696151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 499
Target Start/End: Original strand, 2941312 - 2941451
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| |||||| |||||||||||||| | ||||||||||| ||||  | ||||| |||||||||||||| |||||||| ||||| |||||||||||      
T  2941312 tttaggttccgcatgaaagatatatccgtaggaaatgtgaaattatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataaat 2941410  T
Q  459 nnnnnacctagactctatataattcctggctccgccactga 499  Q
          || || ||||||| ||||||||||||| |||||||    
T  2941411 tttttgcccaggctctataaaattcctggctccaccactga 2941451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 2960664 - 2960776
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||| |||||||||| |||||||||||| || ||||| |||||||||||||||||||        |||||||| ||||| |||||||||||||||  |    
T  2960664 ctccaattttctttgtagcaagtccagccaatactagaacttttagcttttcctgcggattatta--tgtaaatttcgcagaaaacacatttcctgctaa 2960761  T
Q  314 ttttgccaaggattt 328  Q
    ||||||| |||||||    
T  2960762 ttttgcccaggattt 2960776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 9046987 - 9046935
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  9046987 gtgtagattccgcaggaaacacatttcctgcagattttgtcaaggatttaggt 9046935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 179 - 332
Target Start/End: Original strand, 15528880 - 15529042
Alignment:
Q  179 ggggcggagccaacccccagctagcttgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga------ 272  Q
    |||||||||||| |||||| ||||| |||||  | ||||||||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||          
T  15528880 ggggcggagccacccccca-ctagcctgggctaatctccaactttctttgtagcaagccctaccattattagaatttttagcttttcctgcggatttacc 15528978  T
Q  273 ----nnnnnnngtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
               |||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  15528979 tgcggatgtttgtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggt 15529042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 283 - 329
Target Start/End: Original strand, 15122090 - 15122136
Alignment:
Q  283 taaattccgcaggaaacacatttcctgcagattttgccaaggattta 329  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||    
T  15122090 taaattctgcaggaaacacatttcctgcagattttgccaaggattta 15122136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 390 - 456
Target Start/End: Complemental strand, 28614399 - 28614334
Alignment:
Q  390 gaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    ||||||||||| |||| | | |||||||||||||||||||||||||||| |||||||||||||||||    
T  28614399 gaaatgtgaaattatc-agcagaaaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 28614334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 501
Target Start/End: Complemental strand, 1781016 - 1780928
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactgact 501  Q
    |||||||||||||||||||||||||| ||||| |||||||||||        || |||||||||| |||||||||||| ||||| ||||    
T  1781016 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttatgcccagactctataaaattcctggctctgccaccgact 1780928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 497
Target Start/End: Complemental strand, 10397782 - 10397698
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccact 497  Q
    |||||||||||||||||||||||||| ||||| |||||||||||        || |||||||||| ||||||||| |||||||||    
T  10397782 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataaattttttgcccagactctataaaattcctggttccgccact 10397698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 14938981 - 14938934
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||||||||||||||||||||||||||||||||  |||||||    
T  14938981 tgtaaattccgcaggaaacacatttcctgcagattttgcttaggattt 14938934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 366 - 498
Target Start/End: Original strand, 15122140 - 15122271
Alignment:
Q  366 tccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnac 465  Q
    ||||||||||||||||||||| | ||||||| ||| ||||  | | ||||||||||||||||||||| ||| | ||||| |||||||||||        |    
T  15122140 tccgcaggaaagatatatccgtaggaaatgtaaaattatctgcag-aaaatgtgaaattattcgcagaaagaaagtaacgttttgcgataaattttttgc 15122238  T
Q  466 ctagactctatataattcctggctccgccactg 498  Q
    | | |||||||| |||||||| |||||||||||    
T  15122239 ccaaactctataaaattcctgactccgccactg 15122271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 34188856 - 34188922
Alignment:
Q  310 cagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    |||||||| |||| ||||||| | |  |||||| |||||||||||||||||||||||||||||||||    
T  34188856 cagattttaccaatgatttagattctcaggtgaagtaataccttaggattttaggatccgcaggaaa 34188922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 34249039 - 34248943
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||| ||||||||||||||||| |  |||| ||||| ||||  | ||||| ||||||||||| ||||||||||| ||||| |||||||||||    
T  34249039 tttaggttccacaggaaagatatatccgtagaaaatatgaaattatctgcaggaaa-tgtgaaattatccgcaggaaggaagtaacgttttgcgataa 34248943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 359 - 496
Target Start/End: Original strand, 15529036 - 15529172
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||| | | ||||||||||  ||||  | || ||||||||||||||||| ||||| || ||||  |||||||||||      
T  15529036 tttaggttccgcaggaaagatatatctgtaggaaatgtgaatttatctgcagg-aaatgtgaaattattcgtaggaaagaagtaatgttttgcgataaat 15529134  T
Q  459 nnnnnacctagactctatataattcctggctccgccac 496  Q
          ||||| ||||||| |||||||| |||||||||    
T  15529135 tttttgcctaggctctataaaattcctgactccgccac 15529172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Complemental strand, 9047060 - 9047005
Alignment:
Q  217 caactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||  ||||||| |||||| ||||| |||||||||||||||||||    
T  9047060 caactttctttgtagtaagtccaaccattactagaatttttagcttttcctgcgga 9047005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 373 - 456
Target Start/End: Complemental strand, 23663771 - 23663689
Alignment:
Q  373 gaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||| |  |||||||||| ||||  | ||||| |||||||||||||||||||| || ||||| |||||||||||    
T  23663771 gaaagatatatccgtagaaaatgtgaaattatctgcaggaaa-tgtgaaattattcgcaggaatgaagtaacgttttgcgataa 23663689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 34188770 - 34188828
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||| |||||||||| ||||| ||| | |||||||||||||    
T  34188770 ctccaactttctttgtagcaagcccagccattactagaactttcaacttttcctgcgga 34188828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 2960794 - 2960858
Alignment:
Q  391 aaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||| ||||| | ||||| |||||||||||||||| |||||| |||||||||||| ||||    
T  2960794 aaatgtgaaattatccgcaggaaa-tgtgaaattattcgcaagaaggaagtaacattttgcaataa 2960858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 339481 - 339524
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    ||||||||||||| | |||||||||| |||||||||||||||||    
T  339481 aaatgtgaaattaattgcaggaaggaagtaacattttgcgataa 339524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 14938895 - 14938852
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||| ||||||| | |||||||||||||||||    
T  14938895 aaatgtgaaattattcccaggaagaaagtaacattttgcgataa 14938852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 9696023 - 9696081
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||| |||  ||||| ||||| |||||| ||||||||||||    
T  9696023 ctccaactttctttgtagcaagcccaatcattattagaatttttagattttcctgcgga 9696081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 1e-45; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 280 - 413
Target Start/End: Original strand, 3012353 - 3012486
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| || ||||||||||||||| |||||||||||||||||||||||||||    
T  3012353 gtgtacattccgcaggaaacacacttcctgcagattttgccaaggatataggttcccaggtgaggtaataccataggattttaggatccgcaggaaagat 3012452  T
Q  380 atatccgcaagaaatgtgaaactatccaccggaa 413  Q
    ||||||||| ||||||||||| ||| ||| ||||    
T  3012453 atatccgcaggaaatgtgaaattattcacaggaa 3012486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 284 - 497
Target Start/End: Original strand, 19377442 - 19377638
Alignment:
Q  284 aaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatat 383  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               
T  19377442 aaattccgaaggaaatacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcag----------- 19377530  T
Q  384 ccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattc 483  Q
          ||||||||||| ||||| | |||||||||||||||||||||||||| ||| ||||||||||||||||        || ||||||||||||||||    
T  19377531 ------gaaatgtgaaattatccgcaggaaaatgtgaaattattcgcaggaaagacataacattttgcgataatttttttgcccagactctatataattc 19377624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 234 - 502
Target Start/End: Original strand, 21688114 - 21688380
Alignment:
Q  234 agtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtc 333  Q
    ||||||| ||||| ||||| |||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  21688114 agtccagtcattactagaacttttagcttttcctgcggattttt--gtgtaaattccgcaggaaacacatttcctgcagattttgcgaaggatttaggtt 21688211  T
Q  334 cctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgca-agaaatgtgaaactatccaccggaaaatgtgaaattattcgcag 432  Q
       ||||||| |||||||||||||||||| ||||||||||||||||||||||| |   |||||||||| ||||  | || |||||||||||||||| |||    
T  21688212 atcaggtgagataataccttaggattttaagatccgcaggaaagatatatccgtattaaaatgtgaaattatctgcagg-aaatgtgaaattattcacag 21688310  T
Q  433 gaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactgactg 502  Q
     |  |  ||||||||||| |||||        |||||| |||||| |||||||| |||||||||| ||||    
T  21688311 aatagcagtaacattttgtgataaattttttgcctagattctataaaattcctgactccgccacttactg 21688380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 815121 - 814937
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| ||| || |||||||| ||||| |||||||||||||| ||||       ||||||||||||||| ||| ||||||| ||||||    
T  815121 ctccaactttctttgtagcaaatctagccattactagaacttttagcttttcctacggattttt--gtgtaaattccgcagaaaatacatttcttgcaga 815024  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||||||| |||||||| || | ||||||||||||||||| ||||||||||| ||| ||||||||||||||||  ||||||||||    
T  815023 ttttgccaagaatttaggttcccaagtgaggtaataccttagaattttaggatctgcacgaaagatatatccgcagaaaatgtgaaa 814937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 211 - 497
Target Start/End: Complemental strand, 21932917 - 21932631
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgc 310  Q
    |||||||||||||||||||| |||| ||| |||||| || || ||||| |||||||||||         |||||||||||||||||||||||||||||||    
T  21932917 caactccaactttctttgtagcaagcccaaccattactaaaacttttaacttttcctgcg---atatttgtgtaaattccgcaggaaacacatttcctgc 21932821  T
Q  311 agattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaa---agata-tatccgcaagaaatgtgaaactatcc 406  Q
    |||||||| |||||||||||||  | ||||||||||||||| ||||||||| ||||||||| |||    || | |||||||| ||||| | ||| ||||     
T  21932820 agattttgtcaaggatttaggtttccaggtgaggtaataccataggatttttggatccgcatgaattgtgaaattatccgcaggaaatataaaattatct 21932721  T
Q  407 accggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccact 497  Q
     | || |||| |||||||||||||||||| || |||||||||||||||||        || |||||||||| |||||||| ||||||||||    
T  21932720 gcagg-aaatatgaaattattcgcaggaaagaagtaacattttgcgataaattttttgcccagactctataaaattcctgactccgccact 21932631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 280 - 498
Target Start/End: Complemental strand, 28694112 - 28693891
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa--- 376  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||||| ||||||||||||||||||||||||       
T  28694112 gtgtaaattctgcaggaaacacatttcctgcagattttgcccaggatttaggttcccaggtgaggtaataccataggattttaggatccgcaggaaatgt 28694013  T
Q  377 gata-tatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactcta 475  Q
    || | |||||||| ||  ||||||| |||||   || |||||||||||||||||||| ||||| ||||  |||||||||||        || || |||||    
T  28694012 gaaattatccgcaggatttgtgaaattatccggagg-aaatgtgaaattattcgcagaaaggaagtaaagttttgcgataatttttttgcccaggctcta 28693914  T
Q  476 tataattcctggctccgccactg 498  Q
    || |||||||||||||| |||||    
T  28693913 taaaattcctggctccgtcactg 28693891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 280 - 405
Target Start/End: Complemental strand, 38129065 - 38128940
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagat 379  Q
    |||||||||| | ||||||||||||||||||| |||||||||||||||||||| || |||||||| |||| | |||||||||||||||||||||||||||    
T  38129065 gtgtaaattctgaaggaaacacatttcctgcatattttgccaaggatttaggttcccaggtgaggcaatatcataggattttaggatccgcaggaaagat 38128966  T
Q  380 atatccgcaagaaatgtgaaactatc 405  Q
    ||||  ||| ||||||||||| ||||    
T  38128965 atatgtgcaggaaatgtgaaattatc 38128940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 214 - 400
Target Start/End: Complemental strand, 42439710 - 42439526
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| || |  ||||||||| ||||| |||||| ||| ||||| ||       ||||||||| |||||||||||||||| |||||||    
T  42439710 ctccaactttctttgtagcatgctcagccattactagaacttttagttttacctgcagagtttt--gtgtaaatttcgcaggaaacacattttctgcaga 42439613  T
Q  314 ttttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    ||||||||||||||||||| |||||| ||||||||||| ||| ||||||| || || | |||||||||||||| |  ||||||||||    
T  42439612 ttttgccaaggatttaggttcctaggagaggtaataccatagaattttagaatgcgtatgaaagatatatccgtagaaaatgtgaaa 42439526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 280 - 376
Target Start/End: Original strand, 4843347 - 4843443
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||||    
T  4843347 gtgtacattccgcatgaaacacatttcatgcagattttgccaaggatttaggttcccaggtgaggtaatacattgggattttaggatccgcaggaaa 4843443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 280 - 358
Target Start/End: Complemental strand, 41759680 - 41759602
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggat 358  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| ||| ||||||    
T  41759680 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggttccgagttgaggtaacaccataggat 41759602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 24 - 137
Target Start/End: Complemental strand, 27829468 - 27829355
Alignment:
Q  24 agtgttttgagagttggcagcggcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgcct 123  Q
    ||||||||||| ||||| ||| |||||||| ||||||||||||||||  ||||| || || ||  ||||||||||||||||||||||| | |||||||||    
T  27829468 agtgttttgagggttggaagcagcttggttcttagcagcatcaccaatcaacctctgtttgtccgtgaaagcaacacaagaaggtgttgtcttgttgcct 27829369  T
Q  124 tgatcgttgtgaat 137  Q
    || || ||||||||    
T  27829368 tgttcattgtgaat 27829355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 312 - 396
Target Start/End: Complemental strand, 41862398 - 41862314
Alignment:
Q  312 gattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgt 396  Q
    ||||||||||||||||||||| |  || ||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||    
T  41862398 gattttgccaaggatttaggttctcagatgaggtattaccttaggattttaggatccacaggaaaggtatatccgcaggaaatgt 41862314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 46 - 148
Target Start/End: Original strand, 3148372 - 3148474
Alignment:
Q  46 gcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaa 145  Q
    ||||| || ||||||||||||||||| ||||||||||  ||| ||||||||||| ||||||||||  ||||||||||||| || |||||||| || ||||    
T  3148372 gcttgattcttagcagcatcaccaaccaacctttgatcatcagtgaaagcaacaaaagaaggtgtggttttgttgccttggtcattgtgaataatctcaa 3148471  T
Q  146 ctc 148  Q
    |||    
T  3148472 ctc 3148474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 328
Target Start/End: Complemental strand, 5991556 - 5991432
Alignment:
Q  211 caactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnng-------tgtaaattccgcaggaaacacat 303  Q
    ||||||||| |||||||||| |||| |||||||||| ||||| |||||| ||||||||||||       |       |||||||||||||||||||||||    
T  5991556 caactccaattttctttgtagcaagcccagccattactagaacttttagtttttcctgcggatttacctgcggtttatgtaaattccgcaggaaacacat 5991457  T
Q  304 ttcctgcagattttgccaaggattt 328  Q
    ||||||||||||||||| |||||||    
T  5991456 ttcctgcagattttgcctaggattt 5991432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 332
Target Start/End: Complemental strand, 26723009 - 26722958
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  26723009 tgtaaattccgcaggaaacacatttcctgcagattttgtcaaggatttaggt 26722958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 214 - 328
Target Start/End: Original strand, 30852322 - 30852434
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    |||||| ||||||||||  |||  ||||||||| ||||| ||||| |||||||||||||        |||||||||||||||||||||||||||| ||||    
T  30852322 ctccaattttctttgtagtaagctcagccattactagaacttttaacttttcctgcggaatttta--tgtaaattccgcaggaaacacatttccttcaga 30852419  T
Q  314 ttttgccaaggattt 328  Q
    ||||||| |||||||    
T  30852420 ttttgcctaggattt 30852434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 23704541 - 23704489
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    ||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  23704541 gtgtaaattccgccgaaaacacatttcctgcagattttgccaaggatttaggt 23704489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 221 - 272
Target Start/End: Original strand, 5850707 - 5850758
Alignment:
Q  221 tttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  5850707 tttctttgtaacaagtccagccattactagaagttttaacttttcctgcgga 5850758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 7873279 - 7873232
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  7873279 tgtaaattccgcaggaaacacatttcctgcagattttgcctaggattt 7873232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 411 - 498
Target Start/End: Complemental strand, 814948 - 814861
Alignment:
Q  411 gaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgccactg 498  Q
    ||||||||||||||||| ||||||| || ||||| |||||||||||        || |||||||||||||||||||||||||||||||    
T  814948 gaaaatgtgaaattattagcaggaatgaagtaacgttttgcgataatttttttgcccagactctatataattcctggctccgccactg 814861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 89 - 143
Target Start/End: Original strand, 8546719 - 8546773
Alignment:
Q  89 tgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttc 143  Q
    ||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||    
T  8546719 tgaaagcaacacaagaaggtgttgttttgtttccttgatcattgtgaatgatttc 8546773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 359 - 502
Target Start/End: Complemental strand, 35300454 - 35300312
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||  ||||  | || ||||||||||||||||| | |||||| ||||| |||| ||||||      
T  35300454 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcagg-aaatgtgaaattattcgtaagaaggaagtaacgttttacgataaat 35300356  T
Q  459 nnnnnacctagactctatataattcctggctccgccactgactg 502  Q
          || |  ||||||| ||||||||||||||||||||||||    
T  35300355 ttttttcccaagctctataaaattcctggctccgccactgactg 35300312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 176
Target Start/End: Original strand, 8660254 - 8660375
Alignment:
Q  55 ttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactcgagagt 154  Q
    ||||||||||||||||  ||||||||||  ||| ||||||||||| | ||||||||| ||||||| ||||| |||||||  ||||| || ||||||  ||    
T  8660254 ttagcagcatcaccaatcaacctttgatcgtcagtgaaagcaacaaatgaaggtgttgttttgtttccttggtcgttgtagatgatctcgactcgattgt 8660353  T
Q  155 gttgttccagccacactgcaac 176  Q
    | |  ||||||||||| |||||    
T  8660354 gattctccagccacacagcaac 8660375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 456
Target Start/End: Complemental strand, 22206688 - 22206616
Alignment:
Q  383 tccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||| | ||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  22206688 tccgcaggaaatgtgagattatccgcaggaaa-tgtgaaattattcgcaggaaggaagtaacattttgcgataa 22206616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 456
Target Start/End: Original strand, 22228051 - 22228123
Alignment:
Q  383 tccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||| | ||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  22228051 tccgcaggaaatgtgagattatccgcaggaaa-tgtgaaattattcgcaggaaggaagtaacattttgcgataa 22228123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 280 - 332
Target Start/End: Complemental strand, 35300500 - 35300448
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggt 332  Q
    |||||||||||||||||||   |||||||||||||||||||||||||||||||    
T  35300500 gtgtaaattccgcaggaaatgtatttcctgcagattttgccaaggatttaggt 35300448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 283 - 331
Target Start/End: Complemental strand, 38991229 - 38991181
Alignment:
Q  283 taaattccgcaggaaacacatttcctgcagattttgccaaggatttagg 331  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  38991229 taaattccgttggaaacacatttcctgcagattttgccaaggatttagg 38991181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Complemental strand, 25688249 - 25688202
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    |||||||||||||||||||| ||||||||||||||||||| |||||||    
T  25688249 tgtaaattccgcaggaaacatatttcctgcagattttgcctaggattt 25688202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 46 - 176
Target Start/End: Original strand, 8582664 - 8582794
Alignment:
Q  46 gcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaa 145  Q
    ||||| ||||| |||||||||||||  || ||||||   | | | ||||||||||||||||||||| ||||||| |||||||| ||||| |||||||| |    
T  8582664 gcttgatttttggcagcatcaccaatcaatctttgagaattagtaaaagcaacacaagaaggtgttgttttgtttccttgatcattgtgtatgatttcca 8582763  T
Q  146 ctcgagagtgttgttccagccacactgcaac 176  Q
    | |||  || ||| ||| |||||||| ||||    
T  8582764 cacgatcgttttgctcctgccacactccaac 8582794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 8584628 - 8584535
Alignment:
Q  55 ttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactc 148  Q
    ||||||||| ||||||| ||||||||||  ||  | ||||||||| | |||||||| ||||| ||||||| |||||||||||| || |||||||    
T  8584628 ttagcagcaccaccaaccaacctttgatcatcggtaaaagcaacaaaggaaggtgtgattttattgccttcatcgttgtgaataatctcaactc 8584535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 359 - 456
Target Start/End: Complemental strand, 23704495 - 23704399
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||||| | ||||||||||| ||||  | || |||||| |||||||||||| ||| || ||||| |||| ||||||    
T  23704495 tttaggttccgcaggaaagatatatccgtaggaaatgtgaaattatctgcagg-aaatgtaaaattattcgcaagaaagaagtaacgttttacgataa 23704399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 148
Target Start/End: Complemental strand, 7876929 - 7876833
Alignment:
Q  52 tttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactc 148  Q
    ||||| |||||||||||||  ||||||||||  |   ||||||||||| ||||||||||| || |||||||||| || |||||||| ||||| ||||    
T  7876929 tttttggcagcatcaccaatcaacctttgatcattcgtgaaagcaacaaaagaaggtgttgttctgttgccttgttcattgtgaataatttcgactc 7876833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 148
Target Start/End: Original strand, 8647708 - 8647804
Alignment:
Q  52 tttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactc 148  Q
    |||||||| ||||||||||  ||||||||||  ||  ||||||||||| ||||||||||  || |||| |||||||| |||||||| || |||||||    
T  8647708 tttttagcggcatcaccaatcaacctttgatcatcggtgaaagcaacaaaagaaggtgtagttctgtttccttgatcattgtgaataatctcaactc 8647804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 317
Target Start/End: Complemental strand, 22206745 - 22206709
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagatttt 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  22206745 tgtaaattccgcaggaaacacatttcctgcagatttt 22206709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 281 - 317
Target Start/End: Original strand, 22227994 - 22228030
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagatttt 317  Q
    |||||||||||||||||||||||||||||||||||||    
T  22227994 tgtaaattccgcaggaaacacatttcctgcagatttt 22228030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 272
Target Start/End: Original strand, 3012280 - 3012335
Alignment:
Q  217 caactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||||||||||| |||| ||| |||||| ||||| |||||||||||||||||||    
T  3012280 caactttctttgtagcaagcccaaccattactagaacttttagcttttcctgcgga 3012335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 5991393 - 5991350
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  5991393 aaatgtaaaattattcgcaggaaggaagtaacattttgcgataa 5991350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 49 - 140
Target Start/End: Complemental strand, 8635597 - 8635506
Alignment:
Q  49 tggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgat 140  Q
    |||||||| |||||||||||||  ||||||||    ||| |||||||||||||||||||||| ||| |||| ||||| || ||||| |||||    
T  8635597 tggtttttggcagcatcaccaatcaacctttgtgcgtcagtgaaagcaacacaagaaggtgtgattctgttcccttgctcattgtggatgat 8635506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 265
Target Start/End: Original strand, 19377362 - 19377413
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttc 265  Q
    ||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||    
T  19377362 ctccaactttctttgtaacaactccagccattactagtagttttaacttttc 19377413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 26722932 - 26722889
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| ||||| |||||||||||    
T  26722932 aaatgtgaaattattcgcaggaaggaagtaacgttttgcgataa 26722889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 30852452 - 30852495
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| | |||||||||||||||    
T  30852452 aaatgtgaaattattcgcaggaaggaagcaacattttgcgataa 30852495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 214 - 269
Target Start/End: Complemental strand, 41759756 - 41759701
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgc 269  Q
    ||||||||||||||||| |||| |||||||||| ||||| |||||||||||| |||    
T  41759756 ctccaactttctttgtagcaagcccagccattactagaacttttagcttttcttgc 41759701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 1302321 - 1302399
Alignment:
Q  55 ttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgt 133  Q
    |||||||||||||| |  ||||||||||  ||  ||||||||||| |||| |||||| ||||||||||||| |||||||    
T  1302321 ttagcagcatcaccgatcaacctttgatcatcggtgaaagcaacaaaagacggtgttgttttgttgccttggtcgttgt 1302399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 456
Target Start/End: Original strand, 4843440 - 4843505
Alignment:
Q  390 gaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    ||||||||||| ||||| | ||||| |||||||||||||||||||| || ||||| |||||||||||    
T  4843440 gaaatgtgaaattatccgcaggaaa-tgtgaaattattcgcaggaaagaagtaacgttttgcgataa 4843505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 390 - 456
Target Start/End: Complemental strand, 7873215 - 7873150
Alignment:
Q  390 gaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    ||||||||||| ||||| | ||||| |||||||||||| || ||||||| |||||||||||||||||    
T  7873215 gaaatgtgaaattatccgcaggaaa-tgtgaaattattagcgggaaggaagtaacattttgcgataa 7873150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 180 - 272
Target Start/End: Complemental strand, 7873387 - 7873298
Alignment:
Q  180 gggcggagccaacccccagctagcttgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||| |||||||||||| |||||    |||||| |||||||||| |||| ||| |||||| ||||| ||||||||||| |||||||    
T  7873387 gggcggagcca-cccccagctagcctgggctg--ctccaattttctttgtagcaagcccaaccattactagaacttttagctttttctgcgga 7873298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 91 - 148
Target Start/End: Original strand, 17261438 - 17261495
Alignment:
Q  91 aaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactc 148  Q
    ||||||||| ||||||| || |||||||| |||||||| ||||||||||| |||||||    
T  17261438 aaagcaacaaaagaaggagtaattttgtttccttgatcattgtgaatgatctcaactc 17261495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 359 - 400
Target Start/End: Complemental strand, 26722964 - 26722923
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaa 400  Q
    |||||| ||||||||||||||||||||| |||||||||||||    
T  26722964 tttaggttccgcaggaaagatatatccgtaagaaatgtgaaa 26722923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 137
Target Start/End: Original strand, 8591402 - 8591490
Alignment:
Q  49 tggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaat 137  Q
    |||||||| |||||||||||||  ||||||||||  | | | ||||||||| |||||||||| ||| | || |||||||| ||||||||    
T  8591402 tggttttttgcagcatcaccaatcaacctttgatcattagtaaaagcaacaaaagaaggtgtaattctatttccttgatcattgtgaat 8591490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 8668509 - 8668568
Alignment:
Q  89 tgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactc 148  Q
    ||||||||||| ||||||||||||||  ||| |||||||| |||||||| || |||||||    
T  8668509 tgaaagcaacaaaagaaggtgttattcggtttccttgatcattgtgaataatctcaactc 8668568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 22206822 - 22206764
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| |||||||||| |||| |||| ||||| || || |||||||||||||||||||    
T  22206822 ctccaattttctttgtagcaagcccaggcattactataatttttagcttttcctgcgga 22206764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Original strand, 22227917 - 22227975
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||| |||||||||| |||| |||| ||||| || || |||||||||||||||||||    
T  22227917 ctccaattttctttgtagcaagcccaggcattactataatttttagcttttcctgcgga 22227975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 26723086 - 26723028
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    |||||||||| |||||| ||| |||| |||||| ||||| |||||||||||||| ||||    
T  26723086 ctccaactttttttgtagcaaatccaaccattactagaaattttagcttttcctacgga 26723028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 214 - 272
Target Start/End: Complemental strand, 35300576 - 35300518
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcgga 272  Q
    ||||||||||||||||| |||| ||  |||||| |||||  ||||||||||||||||||    
T  35300576 ctccaactttctttgtagcaagccctaccattactagaatgtttagcttttcctgcgga 35300518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 148
Target Start/End: Original strand, 6790420 - 6790513
Alignment:
Q  55 ttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactc 148  Q
    |||||||||||||| |  |||||||| |  ||  ||||||||||| ||||||||||  ||||||| ||||| || |||||||| || |||||||    
T  6790420 ttagcagcatcaccgatcaacctttggtcatcggtgaaagcaacaaaagaaggtgtggttttgttaccttggtcattgtgaataatctcaactc 6790513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 8538854 - 8538899
Alignment:
Q  95 caacacaagaaggtgttattttgttgccttgatcgttgtgaatgat 140  Q
    ||||||||||||||||  ||||||| |||||||||||||| |||||    
T  8538854 caacacaagaaggtgtggttttgtttccttgatcgttgtgtatgat 8538899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 111
Target Start/End: Original strand, 8568839 - 8568904
Alignment:
Q  46 gcttggtttttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgtt 111  Q
    ||||| ||||| |||||||||||||  || ||||||  || | |||||||||||||||||||||||    
T  8568839 gcttgatttttggcagcatcaccaatcaatctttgagatttagtgaaagcaacacaagaaggtgtt 8568904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 148
Target Start/End: Complemental strand, 10493093 - 10493000
Alignment:
Q  55 ttagcagcatcaccaacaaacctttgattttcaatgaaagcaacacaagaaggtgttattttgttgccttgatcgttgtgaatgatttcaactc 148  Q
    |||||||||||||| |  ||||||||||  |   ||||||||||| ||||||||||  || | || |||||||| |||||||| ||||||||||    
T  10493093 ttagcagcatcaccgatcaacctttgatcattgttgaaagcaacaaaagaaggtgtagttctatttccttgatcattgtgaataatttcaactc 10493000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 495
Target Start/End: Complemental strand, 25688184 - 25688102
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnacctagactctatataattcctggctccgcca 495  Q
    |||||||||||||||| ||| ||||| |||||||||| ||||||       ||| || ||||||| |||| ||||||||||||    
T  25688184 aaatgtgaaattattcacagaaaggaagtaacattttacgataatttttttacccaggctctataaaatttctggctccgcca 25688102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 298 - 400
Target Start/End: Complemental strand, 112271 - 112169
Alignment:
Q  298 acacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaagatatatccgcaagaaatgtg 397  Q
    |||||||| ||||||||| ||| ||| |||||||| || || |||||||||||| ||||||||||||||||||||||||||||||||| || |||| |||    
T  112271 acacattttctgcagattctgctaagaatttaggttcccagatgaggtaataccataggattttaggatccgcaggaaagatatatccacatgaaacgtg 112172  T
Q  398 aaa 400  Q
    |||    
T  112171 aaa 112169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 280 - 376
Target Start/End: Complemental strand, 109371 - 109275
Alignment:
Q  280 gtgtaaattccgcaggaaacacatttcctgcagattttgccaaggatttaggtccctaggtgaggtaataccttaggattttaggatccgcaggaaa 376  Q
    ||||||||||||||| |||||||| | ||||||||||||| ||| |||||||| || ||||||| ||||||| |||||||||||||||| |||||||    
T  109371 gtgtaaattccgcagaaaacacatgttctgcagattttgctaagaatttaggttcccaggtgagataataccataggattttaggatccacaggaaa 109275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 57; Significance: 2e-23; HSPs: 3)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 6890 - 7006
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||  |||||| ||||| |||||||||||||||||||       |||||||||||| ||||||  |||||||||||||    
T  6890 ctccaactttctttgtagcaagccctaccattactagaatttttagcttttcctgcggattatt--gtgtaaattccgaaggaaatgcatttcctgcaga 6987  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  6988 ttttgccaaggatttaggt 7006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 359 - 499
Target Start/End: Original strand, 11613 - 11752
Alignment:
Q  359 tttaggatccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataann 458  Q
    |||||| ||||||||||||||||||||| | ||||||||||  ||||  | ||||| |||||||||||||| |||||||| ||||| |||||||||||      
T  11613 tttaggttccgcaggaaagatatatccgtaggaaatgtgaatttatctgcaggaaa-tgtgaaattattcgtaggaaggaagtaacgttttgcgataaat 11711  T
Q  459 nnnnnacctagactctatataattcctggctccgccactga 499  Q
          || ||  |||||| |||||||||||||||||||||    
T  11712 tttttgcccaggttctataaaattcctggctccgccactga 11752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 214 - 332
Target Start/End: Original strand, 11504 - 11619
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnnngtgtaaattccgcaggaaacacatttcctgcaga 313  Q
    ||||||||||||||||| |||| ||  |||||| ||||| ||||  |||||||||||||       ||||||||||||||| |||  |||||||||||||    
T  11504 ctccaactttctttgtagcaagccctaccattactagaatttttt-cttttcctgcggattatt--gtgtaaattccgcagaaaatgcatttcctgcaga 11600  T
Q  314 ttttgccaaggatttaggt 332  Q
    |||||||||||||||||||    
T  11601 ttttgccaaggatttaggt 11619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 53; Significance: 4e-21; HSPs: 2)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 179 - 329
Target Start/End: Original strand, 1641 - 1788
Alignment:
Q  179 ggggcggagccaacccccagctagcttgggcacaactccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcggannnnnn 278  Q
    |||||||||||| |||||||||||  ||||| || |||||||||||||||||  ||| |||  ||||| || || ||||| |||||||| ||||          
T  1641 ggggcggagcca-cccccagctagtctgggctcagctccaactttctttgtagaaagcccaatcattattaaaatttttaccttttccttcggattttt- 1738  T
Q  279 ngtgtaaattccgcaggaaacacatttcctgcagattttgccaaggattta 329  Q
     ||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  1739 -gtgtaaatttcgcaggaaacacatttcctgcagattttgccaagaattta 1788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 366 - 499
Target Start/End: Original strand, 1792 - 1924
Alignment:
Q  366 tccgcaggaaagatatatccgcaagaaatgtgaaactatccaccggaaaatgtgaaattattcgcaggaaggacgtaacattttgcgataannnnnnnac 465  Q
    ||||||||||||||||||||| | ||||||||||  ||||  | ||||| ||||||||||||||||| ||||| ||||| |||||||||||        |    
T  1792 tccgcaggaaagatatatccgtaggaaatgtgaacttatctgcaggaaa-tgtgaaattattcgcagaaaggaagtaacgttttgcgataaattttttgc 1890  T
Q  466 ctagactctatataattcctggctccgccactga 499  Q
    | |||||||||| |||||||||||||||||||||    
T  1891 ccagactctataaaattcctggctccgccactga 1924  T

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Target: scaffold0638 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 3)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 281 - 328
Target Start/End: Original strand, 4155 - 4202
Alignment:
Q  281 tgtaaattccgcaggaaacacatttcctgcagattttgccaaggattt 328  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||    
T  4155 tgtaaattccgtaggaaacacatttcctgcagattttgcccaggattt 4202  T

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Target: scaffold0638; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Original strand, 4220 - 4263
Alignment:
Q  413 aaatgtgaaattattcgcaggaaggacgtaacattttgcgataa 456  Q
    |||||||||||||||||||||||||| |||||||||||||||||    
T  4220 aaatgtgaaattattcgcaggaaggaagtaacattttgcgataa 4263  T

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Target: scaffold0638; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 214 - 270
Target Start/End: Original strand, 4078 - 4134
Alignment:
Q  214 ctccaactttctttgtaacaagtccagccattagtagaagttttagcttttcctgcg 270  Q
    |||||| |||||||||| |||| |||||||||| ||||| |||||||||||||||||    
T  4078 ctccaattttctttgtagcaagcccagccattactagaacttttagcttttcctgcg 4134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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