View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11168_high_66 (Length: 241)
Name: NF11168_high_66
Description: NF11168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11168_high_66 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 37481321 - 37481099
Alignment:
| Q |
1 |
caaatgatattttcaaacaacccagccattttctcaatagcctcaacaacaattccaccatagtatgtatgaggatacattttgttgccaagaaccctag |
100 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37481321 |
caaatggtattttcaaacaacccagccattttctcaatagcctcaacaacaattccaccatagtatgtatgaggatacattttgttgccaagaaccctag |
37481222 |
T |
|
| Q |
101 |
ctagaactttgcaatctacctcgaagatgatcgattgaaagcaacaatcataagttaattccactgtgaggaacataacataagcctggattcgatcgta |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37481221 |
ctagaactttgcaatctacctcgaagatgatcgattgaaagcaacaatcataagttaattccactgtgaggaacataacataagcctggattcgatcgta |
37481122 |
T |
|
| Q |
201 |
gcagtgtcattgaagtcctacac |
223 |
Q |
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| ||||||||||||||||||||| |
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| T |
37481121 |
gtagtgtcattgaagtcctacac |
37481099 |
T |
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