View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11168_low_16 (Length: 473)
Name: NF11168_low_16
Description: NF11168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11168_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 314; Significance: 1e-177; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 131 - 456
Target Start/End: Complemental strand, 36591260 - 36590935
Alignment:
| Q |
131 |
tgtttaatgtaccacttaccaacttcaaaataatgttcttaatcttataataacgtacacctaacaaaattctatatatatagctcaactcttgactctc |
230 |
Q |
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| T |
36591260 |
tgtttaatgtaccacttaccaacttcaaaataatgatcttaatcttataataacgtacacctaacaaaattctatatatatagctcaactcttgactctc |
36591161 |
T |
|
| Q |
231 |
tcattgtacaattcattttcccaaccaatataaccttttcagtcccattttctattagagtgacataacataagatattttgtggaaatggcaacatttg |
330 |
Q |
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| T |
36591160 |
ttattgtacaattcattttcccaaccaatataaccttttcagtcccattttctattagagtgacataacataagatattttgtggaaatggcaacatttg |
36591061 |
T |
|
| Q |
331 |
gtgcctctgcatttcagtttttaatgttgataatggttataggcttgttttgcgtgacaaacattgttgcacaagattcagagatcgcacccacatcaca |
430 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
36591060 |
gtgcctctgcatttcagtttttaatgttgataatggttataggcttgttttgcgtgacaaacattgttgcacaagattcggagatcgcacccacatcaca |
36590961 |
T |
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| Q |
431 |
attggagactggaactggatttgctt |
456 |
Q |
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|||||||||||||||||||||||||| |
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| T |
36590960 |
attggagactggaactggatttgctt |
36590935 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 36591364 - 36591261
Alignment:
| Q |
1 |
tggattattgcttcggacaaaacgtgtatttaaatattacgttccaaactaaattacccctaaaaagcaataataatccaacataaaagccttaatccaa |
100 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36591364 |
tggattatttcttcggacaaaacgtgtatttaaatattacgttccaaactaaattacccctaaaaagcaataataatccaacataaaagccttaatccaa |
36591265 |
T |
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| Q |
101 |
aagc |
104 |
Q |
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|||| |
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| T |
36591264 |
aagc |
36591261 |
T |
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