View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11168_low_21 (Length: 433)

Name: NF11168_low_21
Description: NF11168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11168_low_21
NF11168_low_21
[»] chr6 (56 HSPs)
chr6 (1-336)||(12194417-12194756)
chr6 (154-301)||(17027407-17027554)
chr6 (154-336)||(20850410-20850591)
chr6 (154-301)||(9352185-9352332)
chr6 (147-297)||(31415958-31416107)
chr6 (154-336)||(13191389-13191570)
chr6 (154-296)||(23986193-23986335)
chr6 (154-299)||(13492457-13492603)
chr6 (154-336)||(13492878-13493060)
chr6 (154-336)||(7911967-7912148)
chr6 (154-301)||(7912433-7912580)
chr6 (154-300)||(2890715-2890861)
chr6 (154-336)||(20896563-20896745)
chr6 (148-301)||(2720433-2720586)
chr6 (154-305)||(28583082-28583234)
chr6 (154-297)||(9440185-9440328)
chr6 (154-296)||(9440733-9440875)
chr6 (154-300)||(11062409-11062555)
chr6 (202-301)||(15929705-15929804)
chr6 (154-293)||(17730985-17731124)
chr6 (162-301)||(28780233-28780372)
chr6 (154-336)||(23776530-23776710)
chr6 (140-219)||(20126044-20126123)
chr6 (147-301)||(1991676-1991830)
chr6 (154-301)||(2681096-2681239)
chr6 (142-219)||(2891158-2891235)
chr6 (361-422)||(6330984-6331045)
chr6 (147-220)||(15929343-15929416)
chr6 (238-336)||(16520057-16520154)
chr6 (154-211)||(27334306-27334363)
chr6 (154-211)||(27395046-27395103)
chr6 (361-404)||(2720636-2720679)
chr6 (87-130)||(28063171-28063214)
chr6 (364-422)||(12194343-12194400)
chr6 (154-300)||(17205462-17205608)
chr6 (140-205)||(3653117-3653182)
chr6 (361-405)||(14771791-14771835)
chr6 (87-127)||(21862461-21862501)
chr6 (87-127)||(33424155-33424195)
chr6 (364-414)||(13492810-13492860)
chr6 (361-403)||(21312003-21312045)
chr6 (361-415)||(32292905-32292959)
chr6 (361-414)||(17027603-17027656)
chr6 (361-414)||(17731185-17731238)
chr6 (361-410)||(20850346-20850395)
chr6 (148-300)||(17851042-17851194)
chr6 (147-299)||(28065705-28065856)
chr6 (276-336)||(3652575-3652634)
chr6 (142-216)||(26380920-26380994)
chr6 (361-414)||(2890911-2890964)
chr6 (361-414)||(20896760-20896813)
chr6 (361-414)||(23776462-23776515)
chr6 (265-306)||(33774989-33775030)
chr6 (361-413)||(2681288-2681340)
chr6 (361-405)||(7911908-7911952)
chr6 (365-405)||(7912340-7912380)
[»] chr7 (53 HSPs)
chr7 (154-336)||(28495943-28496124)
chr7 (140-301)||(7646538-7646699)
chr7 (154-336)||(2193345-2193526)
chr7 (154-336)||(2189233-2189414)
chr7 (154-301)||(34405467-34405614)
chr7 (154-336)||(42515633-42515814)
chr7 (154-336)||(2941633-2941814)
chr7 (154-301)||(7646354-7646501)
chr7 (154-336)||(9125048-9125229)
chr7 (154-295)||(18833415-18833556)
chr7 (154-301)||(13122380-13122528)
chr7 (154-301)||(13125011-13125159)
chr7 (154-336)||(36422341-36422521)
chr7 (140-336)||(6718937-6719131)
chr7 (141-301)||(22529098-22529258)
chr7 (140-300)||(29038882-29039042)
chr7 (154-336)||(28495495-28495665)
chr7 (140-301)||(37671625-37671784)
chr7 (140-301)||(42515215-42515376)
chr7 (147-296)||(5406456-5406606)
chr7 (140-301)||(2466047-2466207)
chr7 (166-301)||(43776178-43776313)
chr7 (238-336)||(2465822-2465919)
chr7 (140-301)||(3305210-3305371)
chr7 (154-211)||(36422595-36422652)
chr7 (154-219)||(43233162-43233227)
chr7 (154-250)||(26419111-26419207)
chr7 (140-211)||(6747938-6748009)
chr7 (139-335)||(35473982-35474177)
chr7 (142-219)||(2611523-2611600)
chr7 (361-414)||(25182382-25182435)
chr7 (361-414)||(42515113-42515166)
chr7 (361-413)||(2193278-2193330)
chr7 (163-301)||(25182484-25182622)
chr7 (87-127)||(21814323-21814363)
chr7 (87-127)||(26403398-26403438)
chr7 (163-295)||(29357341-29357473)
chr7 (87-127)||(46963239-46963279)
chr7 (240-336)||(9623297-9623391)
chr7 (361-404)||(35474193-35474236)
chr7 (142-305)||(37672279-37672442)
chr7 (238-296)||(1628841-1628899)
chr7 (361-410)||(13124773-13124822)
chr7 (361-414)||(42515565-42515618)
chr7 (238-300)||(679940-680002)
chr7 (89-127)||(15614425-15614463)
chr7 (361-411)||(26421832-26421882)
chr7 (361-414)||(2941829-2941882)
chr7 (147-192)||(6747475-6747520)
chr7 (361-402)||(13125208-13125249)
chr7 (361-414)||(28495680-28495733)
chr7 (238-299)||(46425866-46425927)
chr7 (98-127)||(48643528-48643557)
[»] chr1 (62 HSPs)
chr1 (154-336)||(20056692-20056873)
chr1 (154-336)||(20054412-20054593)
chr1 (154-336)||(20054868-20055049)
chr1 (154-336)||(20055324-20055505)
chr1 (154-336)||(20055780-20055961)
chr1 (154-336)||(20056236-20056417)
chr1 (154-336)||(20057139-20057320)
chr1 (154-336)||(20057595-20057776)
chr1 (154-336)||(16451809-16451990)
chr1 (154-336)||(16460962-16461143)
chr1 (154-336)||(20845537-20845718)
chr1 (154-336)||(38340995-38341176)
chr1 (154-336)||(50002951-50003132)
chr1 (154-301)||(51372750-51372897)
chr1 (154-336)||(20060216-20060397)
chr1 (154-336)||(52250295-52250476)
chr1 (139-336)||(50002568-50002764)
chr1 (154-301)||(46693611-46693758)
chr1 (154-301)||(52250666-52250813)
chr1 (154-301)||(52251003-52251150)
chr1 (154-336)||(20053956-20054137)
chr1 (154-305)||(7229819-7229970)
chr1 (154-336)||(35759484-35759665)
chr1 (147-250)||(7547811-7547914)
chr1 (162-292)||(16907366-16907497)
chr1 (141-300)||(43056928-43057087)
chr1 (154-250)||(31822995-31823091)
chr1 (159-300)||(23180854-23180995)
chr1 (361-413)||(20845733-20845785)
chr1 (154-205)||(35759940-35759991)
chr1 (142-300)||(43057387-43057545)
chr1 (361-414)||(35760986-35761039)
chr1 (361-422)||(38340919-38340980)
chr1 (361-413)||(20054152-20054204)
chr1 (361-413)||(20054608-20054660)
chr1 (361-413)||(20055064-20055116)
chr1 (361-413)||(20055520-20055572)
chr1 (361-413)||(20055976-20056028)
chr1 (361-413)||(20056432-20056484)
chr1 (361-413)||(20057335-20057387)
chr1 (245-297)||(31822630-31822682)
chr1 (147-302)||(35168629-35168782)
chr1 (361-411)||(30873022-30873072)
chr1 (154-212)||(49996556-49996614)
chr1 (228-305)||(8278076-8278153)
chr1 (361-414)||(35759680-35759733)
chr1 (361-414)||(43057595-43057648)
chr1 (87-127)||(11993524-11993564)
chr1 (361-413)||(20057791-20057843)
chr1 (96-127)||(10354265-10354296)
chr1 (97-127)||(11749775-11749805)
chr1 (239-301)||(50002246-50002308)
chr1 (361-410)||(2328340-2328389)
chr1 (361-422)||(12883537-12883598)
chr1 (361-410)||(16907259-16907308)
chr1 (361-414)||(20061263-20061316)
chr1 (361-410)||(31822735-31822784)
chr1 (140-205)||(35009870-35009935)
chr1 (361-414)||(50002779-50002832)
chr1 (87-127)||(2071705-2071745)
chr1 (87-127)||(2075235-2075275)
chr1 (147-211)||(39582554-39582618)
[»] chr5 (49 HSPs)
chr5 (154-336)||(3886477-3886658)
chr5 (154-336)||(8641911-8642091)
chr5 (154-336)||(34371701-34371882)
chr5 (154-336)||(2474494-2474675)
chr5 (154-336)||(17445331-17445512)
chr5 (159-299)||(8391203-8391343)
chr5 (154-301)||(3886933-3887080)
chr5 (142-299)||(18750060-18750217)
chr5 (154-301)||(189191-189338)
chr5 (140-300)||(29679969-29680129)
chr5 (154-296)||(30684432-30684574)
chr5 (154-336)||(42788522-42788703)
chr5 (154-336)||(2474048-2474219)
chr5 (154-336)||(34372157-34372338)
chr5 (154-301)||(15512888-15513035)
chr5 (162-301)||(18304554-18304693)
chr5 (140-300)||(1822030-1822190)
chr5 (148-336)||(22556625-22556813)
chr5 (154-294)||(30684887-30685027)
chr5 (154-296)||(24182122-24182264)
chr5 (154-293)||(22557100-22557240)
chr5 (154-294)||(30720136-30720276)
chr5 (154-300)||(10927279-10927425)
chr5 (238-336)||(2193905-2194002)
chr5 (198-335)||(21886066-21886202)
chr5 (154-305)||(11757157-11757308)
chr5 (154-301)||(20858418-20858564)
chr5 (154-296)||(30719681-30719823)
chr5 (147-300)||(5785969-5786122)
chr5 (139-300)||(20039337-20039497)
chr5 (185-291)||(16370618-16370724)
chr5 (361-414)||(22975082-22975135)
chr5 (87-127)||(24137493-24137533)
chr5 (361-413)||(34867812-34867864)
chr5 (361-404)||(1821937-1821980)
chr5 (154-215)||(2194013-2194074)
chr5 (361-414)||(3887129-3887182)
chr5 (361-414)||(8642106-8642159)
chr5 (154-203)||(21883961-21884010)
chr5 (365-413)||(22556558-22556606)
chr5 (140-211)||(1880289-1880360)
chr5 (154-205)||(34867997-34868048)
chr5 (97-127)||(9512364-9512394)
chr5 (361-403)||(21886218-21886260)
chr5 (361-414)||(189089-189142)
chr5 (273-302)||(4673466-4673495)
chr5 (361-410)||(10927475-10927524)
chr5 (365-410)||(22556994-22557039)
chr5 (272-300)||(39147063-39147091)
[»] chr3 (62 HSPs)
chr3 (154-298)||(14820280-14820424)
chr3 (154-336)||(13150430-13150611)
chr3 (154-336)||(31284152-31284333)
chr3 (154-336)||(50347835-50348016)
chr3 (154-301)||(8067403-8067550)
chr3 (154-336)||(11179910-11180091)
chr3 (158-336)||(28561835-28562011)
chr3 (154-299)||(32386610-32386755)
chr3 (154-301)||(16811504-16811649)
chr3 (154-301)||(27187205-27187353)
chr3 (154-301)||(13149975-13150122)
chr3 (145-295)||(3899929-3900079)
chr3 (154-336)||(39653253-39653434)
chr3 (151-298)||(14814075-14814222)
chr3 (154-301)||(32227097-32227244)
chr3 (154-301)||(32227623-32227770)
chr3 (142-336)||(25802412-25802605)
chr3 (140-299)||(37045160-37045316)
chr3 (140-300)||(25238546-25238706)
chr3 (140-336)||(4067222-4067417)
chr3 (154-301)||(16811048-16811195)
chr3 (142-300)||(20884981-20885139)
chr3 (139-296)||(7477319-7477476)
chr3 (142-219)||(25238991-25239068)
chr3 (160-295)||(53150694-53150829)
chr3 (140-301)||(39641060-39641208)
chr3 (225-335)||(41472390-41472499)
chr3 (154-219)||(41473746-41473811)
chr3 (87-127)||(16462863-16462903)
chr3 (160-300)||(25230587-25230727)
chr3 (160-300)||(25238174-25238314)
chr3 (361-413)||(28561768-28561820)
chr3 (362-414)||(39640958-39641010)
chr3 (361-404)||(7477222-7477265)
chr3 (361-404)||(7493912-7493955)
chr3 (142-300)||(25230112-25230270)
chr3 (142-300)||(25237699-25237857)
chr3 (139-296)||(7494009-7494166)
chr3 (147-300)||(30529811-30529963)
chr3 (361-414)||(32797007-32797060)
chr3 (240-301)||(41474120-41474181)
chr3 (154-242)||(18318837-18318925)
chr3 (361-413)||(39653186-39653238)
chr3 (140-211)||(25230959-25231030)
chr3 (154-300)||(25248235-25248382)
chr3 (361-396)||(29224363-29224398)
chr3 (237-296)||(29224452-29224511)
chr3 (361-404)||(31284348-31284391)
chr3 (226-296)||(15377412-15377482)
chr3 (226-296)||(15411083-15411153)
chr3 (140-182)||(15417158-15417200)
chr3 (272-301)||(2911218-2911247)
chr3 (142-219)||(2911289-2911366)
chr3 (364-413)||(14813971-14814020)
chr3 (147-296)||(15392183-15392332)
chr3 (147-296)||(15405674-15405823)
chr3 (361-414)||(30529708-30529761)
chr3 (361-406)||(32386806-32386851)
chr3 (361-414)||(41472322-41472374)
chr3 (86-127)||(42531185-42531226)
chr3 (98-126)||(814167-814195)
chr3 (272-300)||(25239071-25239099)
[»] scaffold0322 (2 HSPs)
scaffold0322 (154-301)||(19089-19236)
scaffold0322 (361-414)||(18987-19040)
[»] scaffold0022 (5 HSPs)
scaffold0022 (154-301)||(163010-163157)
scaffold0022 (154-301)||(162553-162701)
scaffold0022 (140-293)||(163202-163355)
scaffold0022 (154-301)||(69691-69838)
scaffold0022 (361-414)||(162750-162803)
[»] chr4 (70 HSPs)
chr4 (154-301)||(35871750-35871897)
chr4 (154-336)||(49998725-49998906)
chr4 (158-296)||(14571562-14571700)
chr4 (154-298)||(4127288-4127432)
chr4 (154-336)||(23350153-23350334)
chr4 (140-301)||(44470731-44470892)
chr4 (154-296)||(14572024-14572163)
chr4 (154-299)||(7678492-7678637)
chr4 (140-300)||(23943098-23943258)
chr4 (142-336)||(44471183-44471376)
chr4 (161-291)||(8467690-8467815)
chr4 (197-336)||(12691912-12692050)
chr4 (154-292)||(13266218-13266356)
chr4 (154-336)||(50398408-50398589)
chr4 (160-296)||(27578333-27578469)
chr4 (142-300)||(1645607-1645765)
chr4 (139-297)||(3169333-3169491)
chr4 (147-301)||(4185838-4185990)
chr4 (154-296)||(17628639-17628781)
chr4 (140-335)||(21067372-21067566)
chr4 (154-298)||(24629306-24629447)
chr4 (148-297)||(27578773-27578922)
chr4 (158-295)||(41870047-41870184)
chr4 (167-299)||(4127772-4127904)
chr4 (176-294)||(27578178-27578296)
chr4 (142-219)||(4414245-4414322)
chr4 (161-300)||(27026626-27026765)
chr4 (154-220)||(5810038-5810104)
chr4 (154-228)||(15268043-15268117)
chr4 (148-286)||(40607069-40607207)
chr4 (197-336)||(50814738-50814876)
chr4 (142-219)||(7381472-7381549)
chr4 (361-414)||(8467866-8467919)
chr4 (238-336)||(24628931-24629028)
chr4 (159-336)||(1464236-1464411)
chr4 (147-294)||(33764990-33765137)
chr4 (154-205)||(35477879-35477930)
chr4 (156-306)||(42838743-42838894)
chr4 (154-301)||(51331153-51331298)
chr4 (361-415)||(21067754-21067808)
chr4 (147-301)||(52048540-52048684)
chr4 (225-298)||(11828426-11828499)
chr4 (361-414)||(29628733-29628786)
chr4 (361-413)||(12692065-12692117)
chr4 (87-127)||(16871547-16871587)
chr4 (197-269)||(26200206-26200278)
chr4 (140-192)||(53854703-53854755)
chr4 (240-336)||(13613854-13613948)
chr4 (238-301)||(21220285-21220348)
chr4 (238-301)||(50398947-50399010)
chr4 (170-300)||(23942675-23942805)
chr4 (176-305)||(33294784-33294913)
chr4 (361-422)||(1645815-1645876)
chr4 (361-410)||(44471391-44471440)
chr4 (361-414)||(50399059-50399112)
chr4 (240-300)||(29628624-29628684)
chr4 (154-193)||(50399335-50399374)
chr4 (364-406)||(2499663-2499705)
chr4 (364-422)||(3169219-3169277)
chr4 (265-299)||(14351920-14351954)
chr4 (217-299)||(17028999-17029081)
chr4 (225-299)||(17029455-17029529)
chr4 (154-285)||(17506070-17506197)
chr4 (272-301)||(15306079-15306108)
chr4 (373-414)||(20930806-20930847)
chr4 (140-193)||(29628510-29628563)
chr4 (361-422)||(51331347-51331408)
chr4 (364-404)||(21067313-21067353)
chr4 (361-425)||(41869928-41869992)
chr4 (154-210)||(50398864-50398920)
[»] scaffold0217 (1 HSPs)
scaffold0217 (154-301)||(433-580)
[»] scaffold0168 (2 HSPs)
scaffold0168 (154-301)||(2865-3012)
scaffold0168 (361-414)||(2763-2816)
[»] scaffold0005 (2 HSPs)
scaffold0005 (158-296)||(245676-245814)
scaffold0005 (154-296)||(245213-245352)
[»] chr8 (59 HSPs)
chr8 (154-336)||(22026468-22026650)
chr8 (154-336)||(22548425-22548606)
chr8 (154-336)||(41658981-41659162)
chr8 (154-301)||(27022215-27022361)
chr8 (140-301)||(17103204-17103366)
chr8 (140-301)||(10844477-10844638)
chr8 (154-336)||(22548871-22549052)
chr8 (154-299)||(34308811-34308956)
chr8 (154-301)||(25148090-25148236)
chr8 (154-336)||(25147625-25147805)
chr8 (154-299)||(34308355-34308500)
chr8 (140-250)||(15818878-15818988)
chr8 (154-300)||(31283528-31283673)
chr8 (154-336)||(12827130-12827311)
chr8 (140-300)||(8080204-8080364)
chr8 (154-301)||(12100814-12100960)
chr8 (140-336)||(27925988-27926182)
chr8 (142-300)||(2044182-2044340)
chr8 (147-300)||(33852127-33852280)
chr8 (142-300)||(3745225-3745383)
chr8 (140-294)||(15567871-15568025)
chr8 (170-300)||(32292521-32292651)
chr8 (154-306)||(27819124-27819274)
chr8 (144-220)||(28912720-28912796)
chr8 (154-250)||(32292115-32292211)
chr8 (154-301)||(21315986-21316132)
chr8 (239-301)||(25144895-25144957)
chr8 (361-414)||(17103102-17103155)
chr8 (140-240)||(6466440-6466540)
chr8 (154-293)||(25307895-25308034)
chr8 (154-250)||(9251058-9251155)
chr8 (361-414)||(28375126-28375179)
chr8 (147-300)||(30527351-30527504)
chr8 (361-414)||(33852330-33852383)
chr8 (361-413)||(22549067-22549119)
chr8 (361-404)||(41659177-41659220)
chr8 (361-411)||(1297031-1297081)
chr8 (166-300)||(3744762-3744896)
chr8 (139-219)||(6463404-6463485)
chr8 (139-300)||(10729747-10729908)
chr8 (361-414)||(25147557-25147610)
chr8 (361-414)||(29971473-29971526)
chr8 (361-413)||(10844905-10844957)
chr8 (153-205)||(22840424-22840476)
chr8 (361-413)||(27925921-27925973)
chr8 (364-420)||(30334983-30335039)
chr8 (361-404)||(3744669-3744712)
chr8 (362-413)||(10844688-10844739)
chr8 (272-336)||(10844972-10845035)
chr8 (197-299)||(10729605-10729707)
chr8 (376-414)||(12100712-12100750)
chr8 (154-300)||(41913094-41913240)
chr8 (361-414)||(2044079-2044132)
chr8 (361-410)||(22026404-22026453)
chr8 (361-414)||(27021951-27022004)
chr8 (361-414)||(34308551-34308604)
chr8 (361-414)||(34309011-34309064)
chr8 (361-413)||(22548621-22548673)
chr8 (361-413)||(32292419-32292471)
[»] scaffold0499 (1 HSPs)
scaffold0499 (154-413)||(1927-2175)
[»] scaffold0389 (1 HSPs)
scaffold0389 (154-336)||(13409-13590)
[»] chr2 (49 HSPs)
chr2 (154-336)||(30966779-30966960)
chr2 (154-336)||(25337873-25338054)
chr2 (154-301)||(30966357-30966504)
chr2 (154-292)||(32377783-32377921)
chr2 (154-336)||(33771090-33771271)
chr2 (154-301)||(24818449-24818595)
chr2 (154-301)||(32377592-32377739)
chr2 (154-296)||(30961759-30961901)
chr2 (140-297)||(15639861-15640018)
chr2 (147-300)||(16379061-16379214)
chr2 (147-300)||(16379517-16379670)
chr2 (140-300)||(1912648-1912808)
chr2 (176-336)||(8256615-8256774)
chr2 (154-295)||(30963139-30963280)
chr2 (140-297)||(15620025-15620186)
chr2 (156-296)||(30963598-30963738)
chr2 (197-336)||(41754378-41754516)
chr2 (154-336)||(5399693-5399874)
chr2 (238-336)||(11388276-11388373)
chr2 (147-300)||(25433925-25434078)
chr2 (154-294)||(13191104-13191244)
chr2 (162-335)||(29259504-29259676)
chr2 (154-301)||(83140-83287)
chr2 (238-299)||(11394658-11394719)
chr2 (154-336)||(33175047-33175226)
chr2 (361-410)||(41754314-41754363)
chr2 (87-127)||(8986823-8986863)
chr2 (140-295)||(1707170-1707325)
chr2 (361-404)||(1953186-1953229)
chr2 (154-300)||(8074016-8074162)
chr2 (154-216)||(20502172-20502234)
chr2 (361-414)||(1707062-1707115)
chr2 (365-414)||(16379414-16379463)
chr2 (361-414)||(18447990-18448043)
chr2 (246-336)||(29804771-29804860)
chr2 (361-414)||(30966255-30966308)
chr2 (361-413)||(25338069-25338121)
chr2 (87-127)||(32291050-32291090)
chr2 (87-127)||(38583665-38583705)
chr2 (376-422)||(18098965-18099011)
chr2 (246-336)||(16542074-16542164)
chr2 (361-414)||(24818347-24818400)
chr2 (361-414)||(25434128-25434181)
chr2 (361-414)||(27882998-27883051)
chr2 (361-414)||(33174979-33175032)
chr2 (146-250)||(8181230-8181333)
chr2 (365-405)||(16378967-16379007)
chr2 (366-414)||(29259697-29259745)
chr2 (361-405)||(30963792-30963836)
[»] scaffold0243 (2 HSPs)
scaffold0243 (154-301)||(1343-1490)
scaffold0243 (361-413)||(1242-1294)
[»] scaffold0020 (2 HSPs)
scaffold0020 (157-301)||(107342-107486)
scaffold0020 (361-411)||(107535-107585)
[»] scaffold0047 (3 HSPs)
scaffold0047 (140-295)||(17460-17615)
scaffold0047 (140-299)||(17997-18156)
scaffold0047 (361-414)||(18206-18259)
[»] scaffold0018 (2 HSPs)
scaffold0018 (154-301)||(10423-10569)
scaffold0018 (361-414)||(10321-10374)
[»] scaffold0002 (2 HSPs)
scaffold0002 (154-301)||(154880-155027)
scaffold0002 (154-211)||(154515-154572)
[»] scaffold0137 (1 HSPs)
scaffold0137 (140-296)||(7070-7225)
[»] scaffold0277 (1 HSPs)
scaffold0277 (162-301)||(14586-14725)
[»] scaffold0040 (2 HSPs)
scaffold0040 (154-299)||(2086-2231)
scaffold0040 (361-414)||(2282-2335)
[»] scaffold0024 (1 HSPs)
scaffold0024 (154-301)||(105843-105990)
[»] scaffold1519 (1 HSPs)
scaffold1519 (159-283)||(1582-1706)
[»] scaffold0333 (3 HSPs)
scaffold0333 (140-301)||(5144-5304)
scaffold0333 (147-336)||(4650-4837)
scaffold0333 (139-193)||(5354-5408)
[»] scaffold0036 (1 HSPs)
scaffold0036 (154-255)||(26237-26338)
[»] scaffold0088 (1 HSPs)
scaffold0088 (361-410)||(23698-23747)
[»] scaffold0065 (1 HSPs)
scaffold0065 (154-193)||(62983-63022)
[»] scaffold1126 (1 HSPs)
scaffold1126 (364-410)||(991-1037)
[»] scaffold0071 (1 HSPs)
scaffold0071 (140-182)||(45038-45080)
[»] scaffold0557 (1 HSPs)
scaffold0557 (154-219)||(2301-2366)


Alignment Details
Target: chr6 (Bit Score: 176; Significance: 1e-94; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 12194756 - 12194417
Alignment:
Q  1 taacattgacataaataaagactgaaagcttataaaatttcacacaatatagagcgagcgttaacttcaat--cattccatctttcatttgaggggcagt 98  Q
    ||||||||||| |||||||||||||||| |||||||||||||| |||||||| |||||  || ||||||||  |||||||||||||||||||||||||||    
T  12194756 taacattgacagaaataaagactgaaagtttataaaatttcactcaatatagcgcgagttttcacttcaatatcattccatctttcatttgaggggcagt 12194657  T
Q  99 gttagaactttatattatttagtatgtttcttataatacttagacgattttaagtattgc----cgactgaccccacaaatcaacacgagtcttttcagt 194  Q
    ||||||||||||||||||||| |||||||||||||||| | || ||||||||||||||||    |||||||||||| ||| ||||| |||||||||||||    
T  12194656 gttagaactttatattatttattatgtttcttataatattgaggcgattttaagtattgctgaccgactgacccca-aaaccaacatgagtcttttcagt 12194558  T
Q  195 gagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttat 294  Q
    | |||||||||| ||||||||| |||  |  |||||||| ||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  12194557 gtgttttgtccaaactcacacgttttctggaaaactttctaaaaggtcatccatcctaaaattgctccatgtcaaacatgcttaactgtggagttcttat 12194458  T
Q  295 ggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||||||| |||       |||||||||||||||||||||||    
T  12194457 ggaatgaattat-aaaaaagaagatgcatcttgttgatatag 12194417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 17027407 - 17027554
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||  || ||||||| ||   ||||||||||||| ||    
T  17027407 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaa 17027506  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  |||||||||||||||||||||||| |||||    
T  17027507 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatga 17027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 20850591 - 20850410
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20850591 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20850492  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||| ||||||||||||||||| |||        |||||||||||||||||||||||    
T  20850491 aattgctccaagtcaagcacgcttaactgtagagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20850410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 9352332 - 9352185
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| ||||||||||||||||||   ||||||||| ||||| |||||||  |||||||||| |    ||||||||||||| ||    
T  9352332 attgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgagaaacttccaggtaggtcacccatcccaa 9352233  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  9352232 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 9352185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 147 - 297
Target Start/End: Original strand, 31415958 - 31416107
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||| | ||||||||| |||||||||| |||||||||||||||||| ||| ||  ||    
T  31415958 tttaagtattgccgactgatcccacaaaccaacacga-tcttttcagcgtgttttgtcctcactcacacgtttttcgagaaactttccataagatcgtcc 31416056  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgga 297  Q
    |||| |||| |  || | |||||| |||||||| |||||||||||||||||    
T  31416057 atcccaaaactaatctaagtcaaacacgcttaattgtggagttcttatgga 31416107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 13191389 - 13191570
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||| ||||||| ||| ||||||| ||    |||||||||||  ||    
T  13191389 attgccgactgaccccacaaaccaacacgagtcttttcagtgtattttgtcctcactcgcacgcttatcgggaaacttcccggttggtcacccatctcaa 13191488  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||||||||||||| ||||||||||||| || |||        |||||||||||||||||||||||    
T  13191489 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaacgagcta-ccgaaaagaagatgcatcttgttgatatag 13191570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 23986193 - 23986335
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||| ||||||||||| | || || ||| ||||| |||||||| || ||||||| ||| |||||||||||||| ||    
T  23986193 attgccgactgaccccacaaaccaacacaagtcttttcagcgtgtcttctcctcactcgcacgctttccgtgaaacttcccagaaggtcacccatcccaa 23986292  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| |||| |||||  || |||||||||| |||||||||||    
T  23986293 aattgctccaagtcaagcacacttaactgtgaagttcttatgg 23986335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 299
Target Start/End: Complemental strand, 13492603 - 13492457
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgt-ccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||| | || ||||| |||||||   | ||||||| ||   ||||||||||||| |    
T  13492603 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttttttcctcactcgcacgcttactgggaaacttcccggtaggtcacccatccca 13492504  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||||    
T  13492503 aaattgctccaagtcaagcacgcttaactgtggagttcttatggaat 13492457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 13493060 - 13492878
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    ||||| ||||||||| ||||||||||||||||||||||||   ||||| |||| ||||| |||||||  || | ||||||||   ||||||||||||| |    
T  13493060 attgctgactgaccctacaaatcaacacgagtcttttcagcatgtttttgtcctcactcgcacgcttaccgggtaactttccggtaggtcacccatccca 13492961  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||||| || | |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  13492960 aaattgctctaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 13492878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 7912148 - 7911967
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||| ||||||||||| | ||||||||| ||||| || ||||  |||||| ||| ||   ||||||||||||| ||    
T  7912148 attgtcgactgaccccacaaaccaacacaagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaatcttcccggtaggtcacccatcccaa 7912049  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  | || ||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  7912048 aattgctccaagtcaagcaagcataactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 7911967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 7912580 - 7912433
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||| |||||||||| ||||| |||||||||||| | ||||||||| |||||  ||||||  || ||||||| |||  ||||||||||| | ||    
T  7912580 attgccgactaaccccacaaaccaacatgagtcttttcagcgtgttttgtcctcactcgtacgcttaacgggaaacttcccagcaggtcacccattccaa 7912481  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||| |||||| |||||||||||||||||||    
T  7912480 aattgctccaagtcaagcacgtttaactatggagttcttatggaatga 7912433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 2890715 - 2890861
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||| ||||| ||||||||||||||| || | ||||||||| ||||| ||||||| ||| |||||||  ||  |||||||||||||||     
T  2890715 attgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttatcgggaaacttctcagtaggtcacccatcctag 2890814  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
     | | || || |||||  |||||||||||||||||||||||||||||    
T  2890815 tactatttcaagtcaagcacgcttaactgtggagttcttatggaatg 2890861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20896563 - 20896745
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgag-ttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    ||||||| ||||||||||||| |||||||||||||||||||| | |||| ||| ||||| ||| |||  || |||| || ||   ||||||||||||| |    
T  20896563 attgccggctgaccccacaaaccaacacgagtcttttcagtgtgtttttctcctcactcgcacacttaccgggaaatttcccggtaggtcacccatccca 20896662  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||||| |||| | |||  ||||||||| |||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20896663 aaattgctccaagccaagcacgcttaaccgtggagttcttatggaatgagcta-ctgaaaagaagatgcatcttgttgatatag 20896745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 148 - 301
Target Start/End: Original strand, 2720433 - 2720586
Alignment:
Q  148 ttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccca 247  Q
    ||||| |||||||||||||||  |||| | ||||||||||| |||| | ||||||| | ||||| ||||||| ||| ||||||| |||| | ||||||||    
T  2720433 ttaagcattgccgactgaccctgcaaaccgacacgagtcttctcagcgtgttttgttctcactcgcacgcttatcgggaaacttcccaatatgtcaccca 2720532  T
Q  248 tcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||| || | |  |||| |||||  || |||||||||||||||||||||||||||    
T  2720533 tccaaagactactccaagtcaagcacacttaactgtggagttcttatggaatga 2720586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 28583234 - 28583082
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||||||||||||  |||| |||||||||||||  ||||||||| ||||||||||||||  | ||||||||||| || || || ||| | ||    
T  28583234 attgccgactgaccccacaaactaacatgagtcttttcagtatgttttgtccccactcacacgctttctgggaaactttccagaaagtaactcatacaaa 28583135  T
Q  254 -aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaacta 305  Q
     | |  |||||||||||  || |||| ||||||| ||||||||||||||||||    
T  28583134 gactaattccatgtcaaggacacttagctgtggatttcttatggaatgaacta 28583082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 154 - 297
Target Start/End: Original strand, 9440185 - 9440328
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||||||| ||||||||||||||||||| |||| |||   |||||||  || ||||||| ||||  |||||||| ||| |||||||||||||| ||    
T  9440185 attgtcgactgatcccacaaatcaacacgagtttttttagtatattttgtcatcattcacacgtttttttagaaacttcccataaggtcacccatccaaa 9440284  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgga 297  Q
    ||||| ||||  ||||  || |||||||||| ||||||||||||    
T  9440285 aattgctccaaatcaagcacacttaactgtgaagttcttatgga 9440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 9440733 - 9440875
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| || ||||||| ||||||| |  |||||||  ||||  |||  |||||| ||||||| | | |||||||||||||| ||    
T  9440733 attgccgactgaccccacaaaccagcacgagttttttcagcgtattttgtcatcacttgcacatttttcgggaaacttccaagaaggtcacccatcccaa 9440832  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| || | |||||| || |||||||||| |||||||||||    
T  9440833 aattgctcaaagtcaaacacacttaactgtgaagttcttatgg 9440875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 300
Target Start/End: Complemental strand, 11062555 - 11062409
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||| | | |||||||||| | | ||||||| | ||||||||| |||||||  | || ||| |||||||||| | ||||||||||||| ||    
T  11062555 attgccgactgactctataaatcaacacaaattttttcagcgtgttttgtcctcactcacgggtttatcgggaaactttccgataggtcacccatccaaa 11062456  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
     | |  |||| |||||  |||||||||||||||||||||||||||||    
T  11062455 gactactccaagtcaagcacgcttaactgtggagttcttatggaatg 11062409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 202 - 301
Target Start/End: Complemental strand, 15929804 - 15929705
Alignment:
Q  202 gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||| |||||||| |||||  | |||||||   |||||||||||||||| ||||||| | ||||| ||| ||||||||||||||||||||||||||||||    
T  15929804 gtcctcactcacatgctttatgggaaacttcataaaaggtcacccatcccaaaattgcttcatgttaaacacgcttaactgtggagttcttatggaatga 15929705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 293
Target Start/End: Original strand, 17730985 - 17731124
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||| ||||| ||||||||||||||| || | ||||||||| ||||  |||||||  ||| |||||||||   |||||||| |||  ||    
T  17730985 attgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcacttgcacgcttaccgataaactttccggtaggtcacctatctcaa 17731084  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttctta 293  Q
    ||||| |||| |||||  |||||||| |||||||||||||    
T  17731085 aattgctccaagtcaagcacgcttaaatgtggagttctta 17731124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 162 - 301
Target Start/End: Complemental strand, 28780372 - 28780233
Alignment:
Q  162 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttc 261  Q
    ||||||||||||| |||||||||||||||||    ||||| ||| ||||| ||| |||  |   |||||| ||   ||||||||||||| ||||||| ||    
T  28780372 ctgaccccacaaaccaacacgagtcttttcaaaatgttttatcctcactcgcacacttaccagaaaacttcccggtaggtcacccatcccaaaattgctc 28780273  T
Q  262 catgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    || |||||  ||||||||||||||||||||||||||||||    
T  28780272 caagtcaagcacgcttaactgtggagttcttatggaatga 28780233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 23776710 - 23776530
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcga-gaaactttccaaaaggtcacccatccta 252  Q
    ||||||||||||| ||||||| |||||||| ||||||||| | ||||||||  ||||| |||| ||| | | ||||||| |||  |||||| |||||| |    
T  23776710 attgccgactgactccacaaaccaacacgaatcttttcagcgtgttttgtcgtcactcgcacg-tttactaggaaacttcccagtaggtcatccatccca 23776612  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||||| |||| ||||| ||||||||| |||| |||||||||| ||||| |||        |||||||||||||||||||||||    
T  23776611 aaattgctccaagtcaagtacgcttaa-tgtgaagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 23776530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 140 - 219
Target Start/End: Original strand, 20126044 - 20126123
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||||| |||||| |||| |||| ||||| ||||| |||||||||||||||||||| ||||||||| ||||| |||||||    
T  20126044 agacgactttaagcattgtcgacggaccctacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgctt 20126123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 301
Target Start/End: Complemental strand, 1991830 - 1991676
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    ||||| |||||  |||||| ||||||||||||||||||| ||||||| |   ||||||  |||||||| ||||||||  ||||||| || ||||||||||    
T  1991830 tttaaatattgttgactgatcccacaaatcaacacgagttttttcagcgtactttgtcttcactcacatgcttttcggaaaacttttcagaaggtcaccc 1991731  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||| |||| |  ||||  ||||  | | ||||||||| |||||||||| |||||    
T  1991730 atccaaaaactactccaaatcaataatgtttaactgtgaagttcttatgaaatga 1991676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 2681096 - 2681239
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| ||||||||||||| |||  | ||||||||| ||||  |||||||     ||||||| |||    || |||||||| ||    
T  2681096 attgccgactgaccccacaaaccaacacgagtcttctcaacgtgttttgtcctcacttgcacgcttactaggaaacttccca----gtaacccatcccaa 2681191  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||  | ||  |||||||| |||||||||||||||||||||    
T  2681192 aattgttccaaattaagcacgcttaattgtggagttcttatggaatga 2681239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 2891158 - 2891235
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||| |||||| ||||||||||||||| ||||| |||||||| ||||||||| | ||||||||| ||||| |||||||    
T  2891158 acgactttaagcattgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtcctcactcgcacgctt 2891235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 6330984 - 6331045
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatctca 422  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||| |||||||| |||||||    
T  6330984 ttcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggatccatctca 6331045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 220
Target Start/End: Complemental strand, 15929416 - 15929343
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttt 220  Q
    |||||| |||||||| ||||||||||||||||||| |||||||| || |  |||||||| ||||||||||||||    
T  15929416 tttaaggattgccgagtgaccccacaaatcaacacaagtctttttagcgtattttgtcctcactcacacgcttt 15929343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 16520154 - 16520057
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||||  ||||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  16520154 aggtcacccatctcaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 16520057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 27334363 - 27334306
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 211  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  27334363 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactc 27334306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 27395103 - 27395046
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 211  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  27395103 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactc 27395046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 361 - 404
Target Start/End: Original strand, 2720636 - 2720679
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  2720636 ttcttataagtcttccttcaaccatgcagtctcatacctgcacg 2720679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 87 - 130
Target Start/End: Complemental strand, 28063214 - 28063171
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgtttctt 130  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  28063214 ttgaggggaagtgttagaactttatattatttagtatgtttctt 28063171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 12194400 - 12194343
Alignment:
Q  364 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatctca 422  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||||||||| |||||    
T  12194400 ttataagtctttcttcaatcatgcagt-tcatatctgcacggtctcaggattcctctca 12194343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 154 - 300
Target Start/End: Complemental strand, 17205608 - 17205462
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||| | ||| ||||||||| ||||||||||| ||| ||||||| | ||||| || | ||| ||| ||||||||  ||||||| ||||||| ||    
T  17205608 attgccgactaatcccgcaaatcaacgcgagtcttttcggtgtgttttgttctcactcgcatgttttccgaaaaactttcataaaggtctcccatcccaa 17205509  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||  ||||  ||||  | | |||||  ||||||||||||||||||    
T  17205508 aattactccaaatcaagcatgtttaacaatggagttcttatggaatg 17205462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 3653182 - 3653117
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 205  Q
    ||||||||||||| |||||||| |||||| ||||| ||| |||||||||||||| | |||||||||    
T  3653182 agacgattttaagcattgccgattgaccctacaaaccaatacgagtcttttcagcgtgttttgtcc 3653117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 14771791 - 14771835
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacgg 405  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  14771791 ttcttataagtcttccttcaaccatgcagtctcatacctacacgg 14771835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 21862461 - 21862501
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  21862461 ttgaggggaagtgttagaactttatattatttagtatgttt 21862501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 33424195 - 33424155
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  33424195 ttgaggggtagtgttagaactttatattatttagtatgttt 33424155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 13492860 - 13492810
Alignment:
Q  364 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||| ||| |||||||||||||||||||||||||||| | ||||||||    
T  13492860 ttataagccttccttcaaccatgcagtctcatacctgcacagcctcaggat 13492810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 403
Target Start/End: Complemental strand, 21312045 - 21312003
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcac 403  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  21312045 ttcttataagccttccttcaaccatgcagtctcatacctgcac 21312003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 415
Target Start/End: Complemental strand, 32292959 - 32292905
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggatt 415  Q
    |||||||||| |||  |||||||||||||||||||||||||||| ||| ||||||    
T  32292959 ttcttataagccttcattcaaccatgcagtctcatacctgcacgatctaaggatt 32292905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 17027603 - 17027656
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||| ||||    
T  17027603 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctctggat 17027656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 17731185 - 17731238
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||| |||||||||||| |||||||| |||| ||||||||    
T  17731185 ttcttataagtcttcctttaaccatgcagtcccatacctgaacggcctcaggat 17731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 20850395 - 20850346
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  20850395 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctca 20850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 148 - 300
Target Start/End: Complemental strand, 17851194 - 17851042
Alignment:
Q  148 ttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccca 247  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||     |||||||||  |||| ||||| |     ||||||| |||  ||||| ||||    
T  17851194 ttaagtattgccgattgaccctacaaaccaacacgagtcttttcgacttgttttgtcctaactcgcacgcgtactaggaaacttcccagtaggtctccca 17851095  T
Q  248 tcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||| || | |  |||| |||||  ||||||||||||||||||||||| |||||    
T  17851094 tccgaagactactccaagtcaagcacgcttaactgtggagttcttatagaatg 17851042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 147 - 299
Target Start/End: Original strand, 28065705 - 28065856
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    ||||||||||| ||| |||||||  ||  ||||| |||  |||| || | ||||||||  || |||||||||||||| |||||||  | |||||| ||||    
T  28065705 tttaagtattgtcgattgaccccgtaatccaacatgagattttttagcgtgttttgtcatcattcacacgcttttcg-gaaacttctcgaaaggttaccc 28065803  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    |||  |||| || || | |||||| | |||||| |||||||||||||||||||    
T  28065804 atcacaaaactgctcaaagtcaaacatgcttaattgtggagttcttatggaat 28065856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 276 - 336
Target Start/End: Complemental strand, 3652634 - 3652575
Alignment:
Q  276 ttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  3652634 ttaactgtggagttcttatggaatgaacta-ccaaaaagaagatgcatcttgttgatatag 3652575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 142 - 216
Target Start/End: Complemental strand, 26380994 - 26380920
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacg 216  Q
    |||| ||||||||||| | ||||||| || ||| |||| |||||||||| |||| |||||||||  |||||||||    
T  26380994 acgactttaagtattgtcaactgaccacataaaccaactcgagtctttttagtgtgttttgtcctaactcacacg 26380920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 2890911 - 2890964
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||  ||| |||||||||||||||| ||||||||||||| ||| ||||    
T  2890911 ttcttataaaccttccttcaaccatgcagtcccatacctgcacggcctcgggat 2890964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 20896760 - 20896813
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||| || |||||    
T  20896760 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctaaggat 20896813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 23776515 - 23776462
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||||||||||| |||| ||||||| || || ||||||||    
T  23776515 ttcttataagtcttccttcaaccatgtagtcccatacctacaaggcctcaggat 23776462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 33774989 - 33775030
Alignment:
Q  265 gtcaaatacgcttaactgtggagttcttatggaatgaactat 306  Q
    |||||| || |||||||||||||||||||||||||| |||||    
T  33774989 gtcaaacacacttaactgtggagttcttatggaatggactat 33775030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 2681288 - 2681340
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    ||||||||||||||  ||||||||||||||| || |||| ||||| |||||||    
T  2681288 ttcttataagtcttcattcaaccatgcagtcccaaacctacacggcctcagga 2681340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Complemental strand, 7911952 - 7911908
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacgg 405  Q
    ||||||||||| || ||||||||||||||||  ||||||||||||    
T  7911952 ttcttataagttttccttcaaccatgcagtcctatacctgcacgg 7911908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 7912380 - 7912340
Alignment:
Q  365 tataagtctttcttcaaccatgcagtctcatacctgcacgg 405  Q
    ||||||| || |||||||||||||||| |||||||||||||    
T  7912380 tataagttttccttcaaccatgcagtcccatacctgcacgg 7912340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 2e-43; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 28496124 - 28495943
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| |||| ||||||||||||| ||    
T  28496124 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccaataggtcacccatcccaa 28496025  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  28496024 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 28495943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 7646699 - 7646538
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| ||| || |||| ||||| |||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||| |||  |||||||||   ||    
T  7646699 agacgacttttaggattgtcgactaaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttatcggaaaactttccggtag 7646600  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||| ||||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  7646599 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 7646538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 2193526 - 2193345
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||  || ||||||| ||   ||||||||||||| ||    
T  2193526 attgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaa 2193427  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| ||||  ||||  ||||||||||||||||||| |||| ||||| |||        |||||||||||||||||||||||    
T  2193426 aattgctccaaatcaagcacgcttaactgtggagttcctatgaaatgagcta-ccgaatagaagatgcatcttgttgatatag 2193345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 2189414 - 2189233
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||| ||||||||||||||||||||||| |||| | ||||||||| |||||||||||||  || ||||||| ||   ||||||| ||||| ||    
T  2189414 attgccgactgtccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcactcatcccaa 2189315  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||| ||||| ||||       |||||||||||||||||||||||    
T  2189314 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctat-cgaaaagaagatgcatcttgttgatatag 2189233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 34405467 - 34405614
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||||||||||| |||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  34405467 attgtcgactgaccccacaaatcaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 34405566  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  34405567 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 34405614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 42515814 - 42515633
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttcca-aaaggtcacccatccta 252  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || |||| ||||||   ||||||||||||| |    
T  42515814 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg-gaaaatttccatgtaggtcacccatccca 42515716  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  42515715 aaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 42515633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 2941633 - 2941814
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||||| |||||| |||||||||||||||||| | ||||| ||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  2941633 attgccgactgaccgcacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 2941732  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2941733 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 7646354 - 7646501
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  |||||||||| ||   ||||||||||||| ||    
T  7646354 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaaacttcccggtaggtcacccatcccaa 7646453  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||| ||||||||||||||||    
T  7646454 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaatga 7646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 9125229 - 9125048
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| ||||||||||||||||||   ||||||||| ||||| |||||||  ||  |||||| ||   ||||||||||||| ||    
T  9125229 attgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaa 9125130  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||  |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  9125129 aattgctccgagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 9125048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 154 - 295
Target Start/End: Complemental strand, 18833556 - 18833415
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||| | ||||||||||||||||||||||||||| | ||||||||| ||||| |||| ||  || ||||||| ||   ||||||||||||| ||    
T  18833556 attgccgacttatcccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcacccatcccaa 18833457  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatg 295  Q
    ||||| || | |||||| ||||||||||||||||||||||||    
T  18833456 aattgctcaaagtcaaacacgcttaactgtggagttcttatg 18833415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 13122380 - 13122528
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    |||||||| |||||||||||| |||||||||||||||||| | ||||| |||| ||||| |||||||  || ||||||| ||   ||||||||||||| |    
T  13122380 attgccgattgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccca 13122479  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||| ||||  ||||  ||||||||||||||||||||||||||||||    
T  13122480 aaattgctccaaatcaagcacgcttaactgtggagttcttatggaatga 13122528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 13125011 - 13125159
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    ||||||||||||||||||||| ||||||||||| |||||| | ||||| |||| ||||| |||||||   | ||||||| ||   ||||||||||||| |    
T  13125011 attgccgactgaccccacaaaccaacacgagtcctttcagcgtgtttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatccca 13125110  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  13125111 aaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 13125159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 36422521 - 36422341
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   |||||||||||||  |    
T  36422521 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcc-ca 36422423  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  36422422 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 36422341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 140 - 336
Target Start/End: Original strand, 6718937 - 6719131
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| ||| || ||||| ||||||||||||||| |||||||| ||||||||||| ||||||||| ||||| |||||||  || |||| || || | |     
T  6718937 agacgacttttaggattgctgactgaccccacaaaccaacacgattcttttcagtgtgttttgtcctcactcgcacgcttaccgggaaagttcccgatat 6719036  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||||||||||  |||||  |||| |||||  |||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||||    
T  6719037 gtcacccatcc-caaattactccaagtcaagcacgcttaactctggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 6719131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 141 - 301
Target Start/End: Original strand, 22529098 - 22529258
Alignment:
Q  141 gacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaagg 240  Q
    ||||| |||||| |||| |||||||||| ||||| ||||| |||||||||||| |  |||||||| |||||||||||||  ||||||||||  ||  |||    
T  22529098 gacgactttaagcattgtcgactgaccctacaaaccaacatgagtcttttcagcgtattttgtcctcactcacacgcttaccgagaaacttctcagtagg 22529197  T
Q  241 tcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||||||| || | |  |||| |||||| ||||||||||||| ||||||| || |||||    
T  22529198 tcacccatccaaagactactccaagtcaaacacgcttaactgtgaagttcttttgtaatga 22529258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 29038882 - 29039042
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| || ||||||||||  || ||||||| ||   ||    
T  29038882 agacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcagtcacacgcttaccgggaaacttaccggtag 29038981  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| |||||| || | |  |||| |||||  |||||||| ||| ||||||||||||||||    
T  29038982 gtcatccatccaaagactactccaagtcaagcacgcttaaatgtagagttcttatggaatg 29039042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 28495495 - 28495665
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||||||           || ||   ||||||||||||| ||    
T  28495495 attgccgactgaccccacaaaccaacacgagtcttttcagcgggttttgtcctcactcgcacgct-----------ttcccggtaggtcacccatcccaa 28495583  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  28495584 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-cctaaaagaagatgcatcttgttgatatag 28495665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 37671625 - 37671784
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| ||||||||||||  ||||||||| |||| ||||||||| ||||| |||| |||| |||| ||||||||||||||  |||||||||| ||||||    
T  37671625 agacgactttaagtattgca-actgacccc-caaaccaacacgagactttttagtgtgtttggtcctcactcacacgctttatgagaaacttttcaaaag 37671722  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    || |||||||  ||||||| ||||  ||||  |||||||| |||||| ||| |||| |||||    
T  37671723 gtgacccatcacaaaattgctccaattcaagcacgcttaaatgtggatttcatatgaaatga 37671784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 42515376 - 42515215
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| ||| | |||||||  ||| ||| || |    |     
T  42515376 agacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcacccgcacgcttaccgaaaaagttcctggtat 42515277  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||| || | |  |||| |||||  ||||||||||||||||||||||||||||||    
T  42515276 gtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatga 42515215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 296
Target Start/End: Original strand, 5406456 - 5406606
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctttt-cgagaaactttccaaaaggtcacc 245  Q
    |||||| |||||| | || || |||| | |||||||||| ||||||||| ||||||||| ||||| |||| |||| ||  |||||||||| || |||| |    
T  5406456 tttaaggattgccaattgtcctcacagaccaacacgagtgttttcagtgtgttttgtcctcactcgcacgttttttcggaaaactttccagaaagtcatc 5406555  T
Q  246 catcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| ||||||| || | |||||  |||||||||||||||||||||||||    
T  5406556 catcccaaaattgctcaaagtcaagcacgcttaactgtggagttcttatgg 5406606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 2466207 - 2466047
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| |||| |||||||||  |||||  ||||||||||||||||| | ||||||||| ||||  || ||||  || |||| || ||   ||    
T  2466207 agacgactttaagcattgtcgactgacct-acaaactaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaatttcccggtag 2466109  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||||||||  |||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  2466108 gtcacccatcccgaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 2466047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 166 - 301
Target Start/End: Original strand, 43776178 - 43776313
Alignment:
Q  166 ccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatg 265  Q
    ||||||||| |||||||||||||||||| | ||||||||  || || |||||||   |  |||||| ||   ||||||||||| | ||||||| |||| |    
T  43776178 ccccacaaaccaacacgagtcttttcagcgtgttttgtcttcattcgcacgcttactggaaaacttccccgcaggtcacccattccaaaattgctccaag 43776277  T
Q  266 tcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||  ||||||||||||||||||||||||||||||    
T  43776278 tcaagcacgcttaactgtggagttcttatggaatga 43776313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 2465919 - 2465822
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||||| ||||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2465919 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2465822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 3305210 - 3305371
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||||||||| |||||| || |||||||||||||||||||||||| | ||||||| | ||||| ||| |||  |  ||||||||||   ||    
T  3305210 agacgactttaagtattgctgactgatcctacaaatcaacacgagtcttttcagcgtgttttgttctcactcgcactcttaccaggaaactttccggtag 3305309  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||| || | |  ||||  ||||  ||||||||||||| |||| ||||| |||||    
T  3305310 gtcacccatccaaagactactccaaatcaagcacgcttaactgtgaagtttttatgtaatga 3305371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 36422652 - 36422595
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 211  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  36422652 attgtcgactgaccccacaaatcaacacgagtcttttcagtgtgttttgtcctcactc 36422595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 43233227 - 43233162
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||    
T  43233227 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctt 43233162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 26419111 - 26419207
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcc 250  Q
    |||| |||||||||||||||| |||||||||||||||||    ||||||||| |||||||| | ||||||||||| ||  || ||||||||||||||    
T  26419111 attgtcgactgaccccacaaaccaacacgagtcttttcaacatgttttgtcctcactcacatgattttcgagaaaattctcagaaggtcacccatcc 26419207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 6747938 - 6748009
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 211  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| |||||    
T  6747938 agacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 6748009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 139 - 335
Target Start/End: Original strand, 35473982 - 35474177
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 238  Q
    ||||||| |||||  ||||||  || |||| ||||| |||||| |||| |||||| | ||||||||| ||||| ||| |||  ||||||| || ||   |    
T  35473982 tagacgactttaaacattgccctctaaccctacaaaccaacacaagtcatttcagcgtgttttgtcctcactcgcacacttaccgagaaaattcccggta 35474081  T
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatata 335  Q
     ||||||||||| || | |  |||| |||||| |||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||    
T  35474082 cgtcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatggaatgagcta-ccaaaaagaagatgcatcttgttgatata 35474177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 2611523 - 2611600
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||    
T  2611523 acgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagagtgttttgtcctcactcgcacgctt 2611600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 25182435 - 25182382
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  25182435 ttcttataagtcttccttcaaccatgcagtctcatacttgcacagtctcaggat 25182382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 42515166 - 42515113
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  42515166 ttcttataagtcttccttcaatcatgcagtctcatacctgcacggcctcaggat 42515113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 2193330 - 2193278
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  2193330 ttcttataagccttccttcaaccatgcagtcccatacctgcacggtctcagga 2193278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 163 - 301
Target Start/End: Complemental strand, 25182622 - 25182484
Alignment:
Q  163 tgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttcc 262  Q
    |||||||||||  ||| |||||| |||| || | |||||| || |||||  |||||||| ||||||||| ||| ||||||  |||||| || | |  |||    
T  25182622 tgaccccacaacccaatacgagtttttttagcgtgttttgccctcactcgaacgctttttgagaaacttcccagaaggtcctccatccaaagactactcc 25182523  T
Q  263 atgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    | |||||| || |||||||||| ||||||||||||||||    
T  25182522 aagtcaaacacacttaactgtgaagttcttatggaatga 25182484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 21814323 - 21814363
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  21814323 ttgaggggtagtgttagaactttatattatttagtatgttt 21814363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 26403398 - 26403438
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  26403398 ttgaggggtagtgttagaactttatattatttagtatgttt 26403438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 295
Target Start/End: Original strand, 29357341 - 29357473
Alignment:
Q  163 tgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttcc 262  Q
    |||||| ||||| |||||||||||||||||  | | ||||| | ||||| ||||||||||||| ||||| ||  ||||||| ||||| ||| | |  ||     
T  29357341 tgaccctacaaaccaacacgagtcttttcaacgtgctttgttctcactcgcacgcttttcgaggaacttaccggaaggtcatccatcttaagactactct 29357440  T
Q  263 atgtcaaatacgcttaactgtggagttcttatg 295  Q
    | |||||| ||| ||||||||| ||||||||||    
T  29357441 aagtcaaacacggttaactgtgtagttcttatg 29357473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 46963279 - 46963239
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  46963279 ttgaggggtagtgttagaactttatattatttagtatgttt 46963239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 336
Target Start/End: Complemental strand, 9623391 - 9623297
Alignment:
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||| || | |  |||| |||||| ||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||||    
T  9623391 gtcacccatccaaagactagtccaagtcaaacacgcttaactgtggagttcttatagaatgaacta--ccgaaagaagatgcatcttgttgatatag 9623297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 404
Target Start/End: Original strand, 35474193 - 35474236
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  35474193 ttcttataagtctttcttcaaccatgtagtctcatacctacacg 35474236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 305
Target Start/End: Complemental strand, 37672442 - 37672279
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||||||| | || | |||||| ||| ||||||| || ||||||  |  |||| ||| ||||||||   ||| ||||||| || ||| |||||    
T  37672442 acgactttaagtatttctgattaaccccataaaccaacacgggtattttcaacgtattttatcctcactcacatattttccgagaaatttcccagaaggt 37672343  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaacta 305  Q
    | |||||  ||||||||||| | |||||| ||||||||||||| | |||||||| ||| |||||    
T  37672342 cgcccattataaaattgttcaaagtcaaacacgcttaactgtgtatttcttatgaaatcaacta 37672279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 296
Target Start/End: Complemental strand, 1628899 - 1628841
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||||||||||| ||||||| |||| | ||||||| ||||||| ||||||||||||||    
T  1628899 aggtcacccatcccaaaattgctccaagccaaatacacttaactatggagttcttatgg 1628841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 13124773 - 13124822
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  13124773 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctca 13124822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 42515618 - 42515565
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||| ||||||||    
T  42515618 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggat 42515565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 300
Target Start/End: Complemental strand, 680002 - 679940
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||||||||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  680002 aggtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 679940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 127
Target Start/End: Complemental strand, 15614463 - 15614425
Alignment:
Q  89 gaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  15614463 gaggggtagtgtaagaactttatattatttagtatgttt 15614425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 26421832 - 26421882
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcag 411  Q
    ||||||| || ||| |||||||||||||||||||||| ||||||| |||||    
T  26421832 ttcttatgagccttacttcaaccatgcagtctcatacatgcacggcctcag 26421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 2941829 - 2941882
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||| || ||| |||||||||||||||| |||||||| |||| ||||||||    
T  2941829 ttcttatcagccttccttcaaccatgcagtcccatacctgtacggcctcaggat 2941882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 192
Target Start/End: Original strand, 6747475 - 6747520
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttca 192  Q
    |||||| ||||||||||||||| ||||| |||||| ||||||||||    
T  6747475 tttaagcattgccgactgaccctacaaaccaacacaagtcttttca 6747520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 402
Target Start/End: Original strand, 13125208 - 13125249
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgca 402  Q
    |||||||||| ||| |||||||||||||||| ||||||||||    
T  13125208 ttcttataagccttccttcaaccatgcagtcccatacctgca 13125249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 28495680 - 28495733
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||  ||||||||    
T  28495680 ttcttataagtcttccttcaaccatgtagtcccatacctacacgacctcaggat 28495733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 46425927 - 46425866
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    |||||||||||| ||| | |  |||| |||||  ||||||||||||||||||||||||||||    
T  46425927 aggtcacccatcataagactactccaagtcaagcacgcttaactgtggagttcttatggaat 46425866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 98 - 127
Target Start/End: Original strand, 48643528 - 48643557
Alignment:
Q  98 tgttagaactttatattatttagtatgttt 127  Q
    ||||||||||||||||||||||||||||||    
T  48643528 tgttagaactttatattatttagtatgttt 48643557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 6e-41; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20056692 - 20056873
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20056692 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20056791  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20056792 aattgctccaagtcaaacacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20056873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20054412 - 20054593
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20054412 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20054511  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20054512 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20054593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20054868 - 20055049
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20054868 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20054967  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20054968 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20055049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20055324 - 20055505
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20055324 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20055423  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20055424 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20055505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20055780 - 20055961
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20055780 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20055879  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20055880 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20055961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20056236 - 20056417
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20056236 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20056335  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20056336 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20056417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20057139 - 20057320
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20057139 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20057238  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20057239 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20057320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20057595 - 20057776
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20057595 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20057694  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20057695 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20057776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 16451809 - 16451990
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||  ||| | ||||||| | |  |||||||||   ||||||||||||| ||    
T  16451809 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgcttattggaaaactttccggtaggtcacccatcccaa 16451908  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  16451909 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgaacta-ccgaaaagaagatgcatcttgttgatatag 16451990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 16460962 - 16461143
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||  ||| | ||||||| | |  |||||||||   ||||||||||||| ||    
T  16460962 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgcttattggaaaactttccggtaggtcacccatcccaa 16461061  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  16461062 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgaacta-ccgaaaagaagatgcatcttgttgatatag 16461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20845537 - 20845718
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20845537 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20845636  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||  |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20845637 aatttctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20845718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 38341176 - 38340995
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||| ||| |||||||||||||||| | | ||||||||| ||||| |||||||  || ||||||| |||  ||||||||||||| ||    
T  38341176 attgccgactgaccccataaaccaacacgagtcttttccgcgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaa 38341077  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||||||||||||| |||||||||||||||| |||        |||||||||||||||||||||||    
T  38341076 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaatgagcta-ccgaaatgaagatgcatcttgttgatatag 38340995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 50002951 - 50003132
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||| ||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  50002951 attgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccaaa 50003050  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||||||||||||| ||||||| |||||||| |||        |||||||||||||||||||||||    
T  50003051 aattgctccaagtcaagcacgcttaactgtgaagttcttttggaatgagcta-ctgaaaagaagatgcatcttgttgatatag 50003132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 51372750 - 51372897
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||| |||||||||||| |||||||||||||||||| |  |||||||| ||||| |||||||  ||| |||||| |  | ||||||||||||| ||    
T  51372750 attgccgattgaccccacaaaccaacacgagtcttttcagcggattttgtcctcactcgcacgcttaccgaaaaacttcctgataggtcacccatcccaa 51372849  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| || | |||||  ||||||||||||||||||||||||||||||    
T  51372850 aattgctcaaagtcaagcacgcttaactgtggagttcttatggaatga 51372897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20060216 - 20060397
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||| ||  | ||||||||| ||||| |||||||  ||  |||||| ||   ||||||||||||| ||    
T  20060216 attgccgactgaccccacaaaccaacacgagtctttccatcgtgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaa 20060315  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  || ||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20060316 aattgatccaagtcaagcacacttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20060397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 52250476 - 52250295
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||| | ||    
T  52250476 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccattccaa 52250377  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| | || |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  52250376 aattgcttcaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 52250295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 139 - 336
Target Start/End: Original strand, 50002568 - 50002764
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 238  Q
    ||||||| ||| || |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || | ||||| ||   |    
T  50002568 tagacgactttcaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggggaacttcccggta 50002667  T
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||||| ||||||| |||| |||||| |||||||||| |||||||||||  |||||| |||        |||||||||||||||||||||||    
T  50002668 ggtcatccatcccaaaattgctccaagtcaaacacgcttaactatggagttcttaaagaatgagcta-ccgaaaagaagatgcatcttgttgatatag 50002764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 46693611 - 46693758
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| ||||||| |||||||||| | ||||||||| ||||| ||||| |  || ||||||||||   ||||||||||||| ||    
T  46693611 attgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcataccgggaaactttccggtaggtcacccatcccaa 46693710  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  |||||||||||||||||| ||||| |||||    
T  46693711 aattgctccaagtcaagcacgcttaactgtggagttattatgaaatga 46693758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 52250813 - 52250666
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||  ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  52250813 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 52250714  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| | || |||||  ||||||||||||||||||||||||||||||    
T  52250713 aattgcttcaagtcaagcacgcttaactgtggagttcttatggaatga 52250666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 52251150 - 52251003
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||  ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  52251150 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 52251051  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| | || |||||  ||||||||||||||||||||||||||||||    
T  52251050 aattgcttcaagtcaagcacgcttaactgtggagttcttatggaatga 52251003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 20053956 - 20054137
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| ||||||||||||||||||   ||||||||| ||||| |||||||  |   |||||| ||   ||||||||||||| ||    
T  20053956 attgtcgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccagaaaacttcccggtaggtcacccatcccaa 20054055  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||  |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20054056 aattgctcctagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20054137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 305
Target Start/End: Original strand, 7229819 - 7229970
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||||| |||||||||| |||||||||| |||||||   ||||| ||| ||||  |||||||||||| |||||||  | ||||||||| |||||||    
T  7229819 attgacgactcaccccacaaagcaacacgagttttttcagcatgttttatcctcactttcacgcttttcgaaaaactttatataaggtcaccaatcctaa 7229918  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaacta 305  Q
    ||||| |||| |||||| | ||||| || ||||||||||||| |||||||||    
T  7229919 aattgctccaagtcaaacatgcttatctatggagttcttatgtaatgaacta 7229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 35759484 - 35759665
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||| ||| |||||||||||||||||| | ||||||||| ||||| |||||||  ||| |||||| ||   |||||||| |||| ||    
T  35759484 attgccgactgaccccaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaaacttcccggtaggtcaccaatcccaa 35759583  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||| | |||| |||||  ||| |||||| || |||||||||||||||| |||        |||||||||||||||||||||||    
T  35759584 aatagctccaagtcaagcacgtttaactatgaagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 35759665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 250
Target Start/End: Complemental strand, 7547914 - 7547811
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| |||| |||||||||| ||||||||||||||| |||||||||| |||||||||  |||| ||||||| |||| |||||||||   |||||||||    
T  7547914 tttaagcattgtcgactgaccctacaaatcaacacgagacttttcagtgtgttttgtccttactcgcacgcttatcgaaaaactttccggtaggtcaccc 7547815  T
Q  247 atcc 250  Q
    ||||    
T  7547814 atcc 7547811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 162 - 292
Target Start/End: Complemental strand, 16907497 - 16907366
Alignment:
Q  162 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccac-actcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgtt 260  Q
    ||||||||||||| |||||||||||||| |||||  ||||||||   |||  || ||||||| ||||||||  ||||||||||||||||  ||||||| |    
T  16907497 ctgaccccacaaaccaacacgagtctttccagtgtattttgtcctttacttgcatgcttttcaagaaacttctcaaaaggtcacccatctcaaaattgct 16907398  T
Q  261 ccatgtcaaatacgcttaactgtggagttctt 292  Q
    ||| |||||| |||||||||| ||||||||||    
T  16907397 ccaagtcaaacacgcttaactatggagttctt 16907366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 141 - 300
Target Start/End: Original strand, 43056928 - 43057087
Alignment:
Q  141 gacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaagg 240  Q
    ||||| |||||  ||||||||||||||| ||||| |||||| ||| ||||||||| ||||||||| ||||| || ||||  || ||||||| |||  |||    
T  43056928 gacgactttaataattgccgactgaccctacaaaccaacacaagttttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccagtagg 43057027  T
Q  241 tcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||||||||| || |    || | |||||  |||||||||||||||||||||||||||||    
T  43057028 tcacccatccaaagaccactctaagtcaatcacgcttaactgtggagttcttatggaatg 43057087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 250
Target Start/End: Original strand, 31822995 - 31823091
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcc 250  Q
    ||||| ||||||||||||||||||||||||||||||||||   ||||||||| ||||| || ||||  |||||||||| |||  |||||||||||||    
T  31822995 attgctgactgaccccacaaatcaacacgagtcttttcagcatgttttgtcctcactcgcatgcttaccgagaaacttcccagtaggtcacccatcc 31823091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 300
Target Start/End: Complemental strand, 23180995 - 23180854
Alignment:
Q  159 cgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattg 258  Q
    ||||| |||| ||||| |||||  |||||||||||   ||||||||  ||||| |||  |||| || |||||||||| ||||| |||||||| ||||||     
T  23180995 cgactaacccgacaaaccaacattagtcttttcagcatgttttgtcgtcactcgcacattttttgaaaaactttccagaaggtaacccatcccaaaattt 23180896  T
Q  259 ttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
     |||| |||||  |||||||| |||||| |||||||||||||    
T  23180895 ctccaagtcaagcacgcttaattgtggaattcttatggaatg 23180854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20845733 - 20845785
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  20845733 ttcttataagccttccttcaaccatgcagtctcatacctgcacggcctcagga 20845785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 35759940 - 35759991
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 205  Q
    ||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  35759940 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcc 35759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 43057387 - 43057545
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||| ||||| |||||||   ||||| |||||| |||||||| || | ||||||| | |||||||| ||||  || ||||||| |||  ||||    
T  43057387 acgactttaagaattgctgactgacaatacaaaccaacacaagtctttttagcgtgttttgttctcactcacatgcttaccgggaaacttcccagtaggt 43057486  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| |||| || |    |||| |||||  |||||||||||||||||||||||||||||    
T  43057487 caccgatccaaagaccactccaagtcaatcacgcttaactgtggagttcttatggaatg 43057545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 35760986 - 35761039
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||||  || |||||||||||||||||||||||||||||| ||||||||    
T  35760986 ttcttataagctttccttcaaccatgcagtctcatacctgcacggcctcaggat 35761039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 38340980 - 38340919
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatctca 422  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||  |||||||    
T  38340980 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcaggaaccatctca 38340919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20054152 - 20054204
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20054152 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20054204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20054608 - 20054660
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20054608 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20054660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20055064 - 20055116
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20055064 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20055116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20055520 - 20055572
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20055520 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20055572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20055976 - 20056028
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20055976 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20056028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20056432 - 20056484
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20056432 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20056484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20057335 - 20057387
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20057335 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20057387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 245 - 297
Target Start/End: Original strand, 31822630 - 31822682
Alignment:
Q  245 ccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgga 297  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||||| ||||    
T  31822630 ccatcccaaaattgttccaagtcaaaaacgcttaactgtggagttcttttgga 31822682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 302
Target Start/End: Complemental strand, 35168782 - 35168629
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    ||||||||||| | |||||||||||||||||| |||||||||| | | |  |||||||| |||||| || |||||| ||||| ||| || | || || ||    
T  35168782 tttaagtattgtcaactgaccccacaaatcaatacgagtctttcccgcgtattttgtcctcactcatactcttttcaagaaa-ttttcagatggcca-cc 35168685  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaa 302  Q
    |||  | ||||  |||| || ||| |||||||||||||||| ||| ||||||||||    
T  35168684 atcacacaattactccaagttaaacacgcttaactgtggagctctaatggaatgaa 35168629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 30873022 - 30873072
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcag 411  Q
    |||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  30873022 ttcttaaaagtcttccttcaaccatacagtctcatacctgcacggcctcag 30873072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 49996556 - 49996614
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactca 212  Q
    |||||||||||||||||||||  |||| |||||||||||| | ||||||||| ||||||    
T  49996556 attgccgactgaccccacaaactaacaagagtcttttcagcgtgttttgtcctcactca 49996614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 228 - 305
Target Start/End: Complemental strand, 8278153 - 8278076
Alignment:
Q  228 actttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaacta 305  Q
    ||||| ||||||||||||||||| ||||||| | || |||||  |||||||||||||||||  ||||| |||| ||||    
T  8278153 acttttcaaaaggtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagtctttatgaaatggacta 8278076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 35759680 - 35759733
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||||  || |||||||||||||||| ||||||||||||| ||||||||    
T  35759680 ttcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggat 35759733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 43057595 - 43057648
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||| ||||||||    
T  43057595 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggat 43057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 11993524 - 11993564
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  11993524 ttgaggggtagtgttagaagtttatattatttagtatgttt 11993564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 20057791 - 20057843
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||| |||||||    
T  20057791 ttcttataagccttctttcaaccatgcagtcccatacctgcacggcctcagga 20057843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 127
Target Start/End: Original strand, 10354265 - 10354296
Alignment:
Q  96 agtgttagaactttatattatttagtatgttt 127  Q
    ||||||||||||||||||||||||||||||||    
T  10354265 agtgttagaactttatattatttagtatgttt 10354296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 127
Target Start/End: Complemental strand, 11749805 - 11749775
Alignment:
Q  97 gtgttagaactttatattatttagtatgttt 127  Q
    |||||||||||||||||||||||||||||||    
T  11749805 gtgttagaactttatattatttagtatgttt 11749775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 239 - 301
Target Start/End: Original strand, 50002246 - 50002308
Alignment:
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||| |||| ||||||| |||| |||||  || || ||||||||||||||||||||||||    
T  50002246 ggtcaccaatcccaaaattgctccaagtcaagcacactcaactgtggagttcttatggaatga 50002308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 2328389 - 2328340
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||| ||||    
T  2328389 ttcttataagccttccttcaaccatgcagtcccatacctgtacggcctca 2328340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Complemental strand, 12883598 - 12883537
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatctca 422  Q
    ||||||||||| || |||||| ||||||||| ||||||||||| | ||| |||| |||||||    
T  12883598 ttcttataagtattccttcaatcatgcagtcccatacctgcacagcctcgggatccatctca 12883537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 16907308 - 16907259
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||| |||  |||||||||||||| |||||||||||| ||||||    
T  16907308 ttcttataagccttctttcaaccatgcagtttcatacctgcacagtctca 16907259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 20061263 - 20061316
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||||  || |||||||||||||||| ||||||||||||  ||||||||    
T  20061263 ttcttataagctttccttcaaccatgcagtcccatacctgcacgacctcaggat 20061316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 31822735 - 31822784
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    ||||||||| |||| ||||||||||| |||||||||||| ||||| ||||    
T  31822735 ttcttataaatcttccttcaaccatgtagtctcatacctacacggcctca 31822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 205
Target Start/End: Original strand, 35009870 - 35009935
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 205  Q
    |||||| ||| || ||||||||||||||| |||||  |||| |||| ||||||||| |||||||||    
T  35009870 agacgactttgagcattgccgactgaccctacaaacgaacatgagttttttcagtgtgttttgtcc 35009935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 50002779 - 50002832
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||||||||| ||| ||| ||||| ||||||||    
T  50002779 ttcttataagccttccttcaaccatgcagtcccatgcctacacggcctcaggat 50002832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 2071745 - 2071705
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||| || |||||||||||||||||||||    
T  2071745 ttgaggggtagtgttacaagtttatattatttagtatgttt 2071705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 2075275 - 2075235
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||| || |||||||||||||||||||||    
T  2075275 ttgaggggtagtgttacaagtttatattatttagtatgttt 2075235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 39582618 - 39582554
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 211  Q
    |||||| |||||||||||| || ||||| ||| ||||||||| |||| | ||||||||| |||||    
T  39582618 tttaagcattgccgactgatcctacaaaccaaaacgagtcttctcagcgtgttttgtcctcactc 39582554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 3886477 - 3886658
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||   | ||||||| ||   ||||||||||||| ||    
T  3886477 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatccaaa 3886576  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  3886577 aattgctccacgtcaaacacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 3886658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 8641911 - 8642091
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |||||||| ||||   |||||||||||| |||    
T  8641911 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaac-ttcccgtaggtcacccatcttaa 8642009  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  8642010 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 8642091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 34371882 - 34371701
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||  | ||||||||| ||||| |||||||  || ||||||| |||  ||||||||||||| ||    
T  34371882 attgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaa 34371783  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||| ||||||||||||||| |||        |||||||||||||||||||||||    
T  34371782 aattgctccaagtcaagcacgcttaactgtggtgttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 34371701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 2474675 - 2474494
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||| ||| ||||| || ||||  || ||||||||||   ||||||||||||  ||    
T  2474675 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttttcctcactcgcatgcttaccgggaaactttccggtaggtcacccatctcaa 2474576  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2474575 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2474494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 17445331 - 17445512
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  17445331 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 17445430  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||||||||||||||| |||||||||||||| |||        |||||||||||||||||||||||    
T  17445431 aattgctccaagtcaagcacgcttaactgtggatttcttatggaatgagcta-ccgataagaagatgcatcttgttgatatag 17445512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 159 - 299
Target Start/End: Original strand, 8391203 - 8391343
Alignment:
Q  159 cgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattg 258  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||| ||||| |||| || ||||||||||| ||   ||||||||||||| |||||||    
T  8391203 cgactgaccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcgcacgtttatcgagaaacttcccggtaggtcacccatcccaaaattg 8391302  T
Q  259 ttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
     |||| |||||  |||||||||| |||||||||||||||||    
T  8391303 ctccaagtcaagcacgcttaactatggagttcttatggaat 8391343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 3886933 - 3887080
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| ||||||||||||| |||| | ||||||||| ||||| |||||||   | ||||||| |||  ||||||||||||| ||    
T  3886933 attgccgactgaccccacaaaccaacacgagtcttgtcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccagtaggtcacccatccaaa 3887032  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||| ||||||||||||||||    
T  3887033 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaatga 3887080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 142 - 299
Target Start/End: Original strand, 18750060 - 18750217
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||||||||  ||||||||||||||| |||| ||||||||||||||| ||||||||| ||||| ||| ||||   | |||||| | | |||||    
T  18750060 acgactttaagtattgttgactgaccccacaaaccaactcgagtcttttcagtgtgttttgtcctcactcgcacactttctaaaaaacttcctagaaggt 18750159  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||||||||||||||| |||| ||||| |||| |||| | |||||||||||||||||    
T  18750160 cacccatcctaaaattgctccaagtcaagtacgattaattatggagttcttatggaat 18750217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 189338 - 189191
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||| |||||| |||||||| |||||||||||||||||| | ||||||||| ||||| |||| ||  || ||||||||||   ||||||||||||| ||    
T  189338 attgcggactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaactttccggtaggtcacccatcccaa 189239  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  | ||||||||||||||||||||||||||||    
T  189238 aattgctccaagtcaagcatgcttaactgtggagttcttatggaatga 189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 29679969 - 29680129
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| || |  ||||||| ||| |||||||  |  |||    
T  29679969 agacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcatttgcacgcttatcgggaaacttctcggaag 29680068  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||||||| || | |  |||| |||||| |||||||||||||||||||||||| ||||    
T  29680069 gtcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatgtaatg 29680129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 30684432 - 30684574
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||| |||||||||||||||| | ||||||||| |||   ||||||||  |||| |||||||||||||||||||| || |||||||||||||| ||    
T  30684432 attgacgattgaccccacaaatcaatatgagtctttttagtatattttgtccttactcgcacgcttttcgagaaacttttcagaaggtcacccatcccaa 30684531  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| |||| ||  |  |||||||||||||||||||||||||    
T  30684532 aattgctccaagttgagcacgcttaactgtggagttcttatgg 30684574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 42788522 - 42788703
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||| ||||||| ||||||| |||||||||| | ||||||||| ||||| || ||||  |||||||||| ||   |||||||| |||| ||    
T  42788522 attgtcgactgactccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcaagcttaccgagaaacttcccggtaggtcacctatcccaa 42788621  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||||||||||||||||||||| |||||||| |||        |||||||||||||||||||||||    
T  42788622 aattgctccaagtcaagcacgcttaactgtggagttcttgtggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 42788703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 2474219 - 2474048
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || |          | ||||||||||||| ||    
T  2474219 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggg----------ataggtcacccatcccaa 2474130  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2474129 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2474048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 34372338 - 34372157
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||| ||| ||| |||||||||| ||||||| | ||||| ||| ||||| ||||||| |||  |||||| ||   |||||||| |||| ||    
T  34372338 attgccgactgacgccataaaccaacacgagtattttcagcgtgttttttcctcactcgcacgcttatcggaaaacttcccggtaggtcaccaatcccaa 34372239  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||||||||||||| |||||||||||||||| |||        |||||||||||||||||||||||    
T  34372238 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 34372157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 15512888 - 15513035
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||  |  |||||||| ||||| |||||||  || ||||||| ||   |||||| |||||| ||    
T  15512888 attgccgactgaccccacaaaccaacacgagtcttttcaacgtattttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcatccatcccaa 15512987  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| | || |||||  ||| |||| |||||||||||||||||||||    
T  15512988 aattgcttcaagtcaagcacgtttaattgtggagttcttatggaatga 15513035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 162 - 301
Target Start/End: Complemental strand, 18304693 - 18304554
Alignment:
Q  162 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttc 261  Q
    ||||||||| |||||||||||||| | ||||| | ||||||||| ||||| |||  |||  | |||||||  ||||||||||||||||  ||||||| ||    
T  18304693 ctgaccccagaaatcaacacgagtttgttcagcgtgttttgtcctcactcgcacaatttctgtgaaacttctcaaaaggtcacccatcacaaaattgctc 18304594  T
Q  262 catgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    || |||||| | ||||||||||||| ||||||||||||||    
T  18304593 caagtcaaacatgcttaactgtggaattcttatggaatga 18304554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 1822190 - 1822030
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||  ||| ||||| ||||| |||||||||||||||||| | ||||||||| || ||||||||||  || ||||||| ||   ||    
T  1822190 agacgactttaagcattgttgaccgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgggaaacttcccggtag 1822091  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||||||| || | |  |||| |||||  |||||||| ||||||||||||||||||||    
T  1822090 gtcacccatccaaagactactccaagtcaagcacgcttaaatgtggagttcttatggaatg 1822030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 148 - 336
Target Start/End: Complemental strand, 22556813 - 22556625
Alignment:
Q  148 ttaagtattgccgactgaccccacaaatcaacacgagtctttt-cagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    ||||| |||| |||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||||||  |||||||||| |    |||||||||    
T  22556813 ttaaggattgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctggtaggtcaccc 22556714  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||| ||||||| |||| ||||   ||||||||||||| ||||||||  |||||| |||        |||||||||||||||||||||||    
T  22556713 atcccaaaattgctccaagtcagccacgcttaactgtgaagttcttaaagaatgagcta-ccgaaaagaagatgcatcttgttgatatag 22556625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 30684887 - 30685027
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||| |||||||||||| |||||||||||||||||| | ||||||||| | ||  |||||||||||  |||||||| | || |||| |||||  ||    
T  30684887 attgccgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcgcttgcacgcttttcggaaaactttcaagaaagtcatccatctcaa 30684986  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttat 294  Q
    |||||||||| |||||  || |||||| || ||||||||||    
T  30684987 aattgttccaagtcaagcacacttaaccgtagagttcttat 30685027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 24182122 - 24182264
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||||| |||||||||| |||||||| ||||||||  | ||||| ||| ||||| ||| |||| |||||||||||  | |||||||||||||| ||    
T  24182122 attgtcgactaaccccacaaaccaacacgaatcttttcaacgtgttttatcctcactcgcacactttccgagaaactttttagaaggtcacccatcccaa 24182221  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| |||| |||||  ||||||||||||  |||| ||||||    
T  24182222 aattgctccaagtcaaccacgcttaactgttaagttattatgg 24182264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 22557240 - 22557100
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtctttt-cagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    |||| |||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| |    
T  22557240 attgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccca 22557141  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttctta 293  Q
    |||||| |||| ||||   ||||||||||||| ||||||||    
T  22557140 aaattgctccaagtcaggcacgcttaactgtgaagttctta 22557100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 154 - 294
Target Start/End: Original strand, 30720136 - 30720276
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||| |||| ||||||| ||||| |||||||||||| | ||||||||| | ||| |||||||||||  || ||||| | || |||| |||||| ||    
T  30720136 attgtcgattgactccacaaaccaacaggagtcttttcagcgtgttttgtcctcgctcgcacgcttttcggaaagctttcaagaaagtcatccatcccaa 30720235  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttat 294  Q
    |||||||||| |||||  ||| |||||||| ||||||||||    
T  30720236 aattgttccaagtcaagcacgattaactgtagagttcttat 30720276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 10927279 - 10927425
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||| ||||| ||||| |||||||||||||||||| | ||||||||| || ||||||||||  ||| |||||| ||    |||||||||||| ||    
T  10927279 attgtcgaccgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgaaaaacttcccggtcggtcacccatccaaa 10927378  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
     | |  |||| |||||  ||| |||||||||||||||||||||||||    
T  10927379 gactactccaagtcaagcacgtttaactgtggagttcttatggaatg 10927425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 2194002 - 2193905
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||||| ||||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2194002 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2193905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 335
Target Start/End: Original strand, 21886066 - 21886202
Alignment:
Q  198 ttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgga 297  Q
    |||||||| ||||| |||||||  || ||||||| |||  ||||||||||||| ||||||| |||| |||||  || ||||||| |||||||||||||||    
T  21886066 ttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacacttaactttggagttcttatgga 21886165  T
Q  298 atgaactatnnnnnnngaagatgcatcttgttgatata 335  Q
    |||| |||        ||||||||||||||||||||||    
T  21886166 atgagcta-ccgaaaagaagatgcatcttgttgatata 21886202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 305
Target Start/End: Original strand, 11757157 - 11757308
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||||||| |||| ||||| ||||||||| || |  ||| |||| |||||||||||||  ||| ||| || ||   ||||||||||||   |    
T  11757157 attgccgactgaccccgcaaaccaacaagagtcttttaagcggatttcgtcctcactcacacgcttaccgaaaaatttcccggtaggtcacccatctcga 11757256  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaacta 305  Q
    ||||| |  | |||||  |||||||||||||||||||||||||| |||||||    
T  11757257 aattgctgtaagtcaagcacgcttaactgtggagttcttatggattgaacta 11757308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 20858418 - 20858564
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||  |||||||||||||||| ||||||| | ||||||||| ||||  || |||||||   |||||| ||| ||||||| |||||| ||    
T  20858418 attgtcgactgacctaacaaatcaacacgagtattttcagcgtgttttgtcctcactagcatgcttttcagaaaacttcccagaaggtca-ccatcccaa 20858516  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    | ||| |||| |||||  |  ||||||| |||||||||||||||||||    
T  20858517 agttgctccaagtcaagcaaccttaactatggagttcttatggaatga 20858564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 30719681 - 30719823
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||| ||||||||||||| || ||||||||||| |||  ||||||| | | ||| |||||||||| |||||||||  | || ||||||| ||| ||    
T  30719681 attggcgattgaccccacaaattaatacgagtctttttagtatgttttgttctctctcgcacgcttttcaagaaactttttagaatgtcacccgtcccaa 30719780  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| |||| ||  |  |||||||| ||||||||||||||||    
T  30719781 aattgctccaagttgagcacgcttaattgtggagttcttatgg 30719823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 5786122 - 5785969
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||||||||  || ||| || ||||| ||| ||||||||||||| || ||||||||| || ||  |   ||||  | |||||||||| ||| |||| |    
T  5786122 tttaagtattgttgattgatcctacaaaccaatacgagtcttttcaatgtgttttgtcctcattcgtataattttttaaaaactttccagaagatcactc 5786023  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||||||||||| |||| |||||| ||||||||  || ||||||||||||||||    
T  5786022 atcctaaaattgctccaagtcaaacacgcttaagcgtagagttcttatggaatg 5785969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 139 - 300
Target Start/End: Original strand, 20039337 - 20039497
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 238  Q
    ||||||| |||||| |||||| ||||| |  ||||| ||||| |||||||||||| | ||||||||| ||||| |||||||  || ||||||| |||| |    
T  20039337 tagacgactttaagcattgccaactgatca-acaaaccaacatgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccaata 20039435  T
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||| |||| || | |  || | |||||  || ||||||||| ||||||||||||||||    
T  20039436 ggtcaccaatccaaagactactctaagtcaagcacacttaactgtagagttcttatggaatg 20039497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 185 - 291
Target Start/End: Original strand, 16370618 - 16370724
Alignment:
Q  185 tcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtg 284  Q
    ||||||||||| ||||| ||| || || ||||||||  |||||||||| || || ||||||||||| ||||||| |||| |||||| | ||||||||| |    
T  16370618 tcttttcagtgtgttttttcctcattcgcacgctttatgagaaacttttcagaatgtcacccatcccaaaattgctccaagtcaaacatgcttaactgcg 16370717  T
Q  285 gagttct 291  Q
    | |||||    
T  16370718 gggttct 16370724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 22975082 - 22975135
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||    
T  22975082 ttcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggat 22975135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 24137493 - 24137533
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  24137493 ttgaggggtagtgttagaactttatattatttagtatgttt 24137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 34867864 - 34867812
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  34867864 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 34867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 1821980 - 1821937
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  1821980 ttcttataagccttccttcaaccatgcagtctcatacctgcacg 1821937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 2194074 - 2194013
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacac 215  Q
    |||| |||||||||||||||| ||||||| |||||||||| | ||||||||| ||||| |||    
T  2194074 attgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcac 2194013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 3887129 - 3887182
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||| |||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  3887129 ttcatataagtcttccttcaaccatgcagtcccatacctgtacggcctcaggat 3887182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 8642106 - 8642159
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| || |||||    
T  8642106 ttcttataagccttccttcaaccatgcagtcccatacctgcacggccttaggat 8642159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 154 - 203
Target Start/End: Original strand, 21883961 - 21884010
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgt 203  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||    
T  21883961 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgt 21884010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 365 - 413
Target Start/End: Complemental strand, 22556606 - 22556558
Alignment:
Q  365 tataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  22556606 tataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 22556558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Complemental strand, 1880360 - 1880289
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 211  Q
    |||||| |||||| |||| |||| ||||  ||||| |||||||||||||||||| | ||||||||| |||||    
T  1880360 agacgactttaagcattgtcgacggaccttacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 1880289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 34868048 - 34867997
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 205  Q
    ||||||||| || |||||||||||||||||||||||| || | |||||||||    
T  34868048 attgccgacggatcccacaaatcaacacgagtctttttagcgtgttttgtcc 34867997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 127
Target Start/End: Original strand, 9512364 - 9512394
Alignment:
Q  97 gtgttagaactttatattatttagtatgttt 127  Q
    |||||||||||||||||||||||||||||||    
T  9512364 gtgttagaactttatattatttagtatgttt 9512394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 403
Target Start/End: Original strand, 21886218 - 21886260
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcac 403  Q
    |||||||||| ||| |||||||||||||||| |||||||||||    
T  21886218 ttcttataagccttccttcaaccatgcagtcccatacctgcac 21886260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 189142 - 189089
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||||||||| ||||| || |||| ||||||||    
T  189142 ttcttataagccttccttcaaccatgcagtcccatacatgtacggcctcaggat 189089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 302
Target Start/End: Original strand, 4673466 - 4673495
Alignment:
Q  273 cgcttaactgtggagttcttatggaatgaa 302  Q
    ||||||||||||||||||||||||||||||    
T  4673466 cgcttaactgtggagttcttatggaatgaa 4673495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 10927475 - 10927524
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||| ||||    
T  10927475 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctca 10927524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 22557039 - 22556994
Alignment:
Q  365 tataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  22557039 tataagccttccttcaaccatgcagtcccatacctgcacggcctca 22556994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 300
Target Start/End: Complemental strand, 39147091 - 39147063
Alignment:
Q  272 acgcttaactgtggagttcttatggaatg 300  Q
    |||||||||||||||||||||||||||||    
T  39147091 acgcttaactgtggagttcttatggaatg 39147063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 6e-38; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 154 - 298
Target Start/End: Complemental strand, 14820424 - 14820280
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||  || ||||  || |||||||||| | ||||||||||||| ||    
T  14820424 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaactttccgataggtcacccatcccaa 14820325  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaa 298  Q
    |||||||||| |||||  |||||||||||||||||||||||||||    
T  14820324 aattgttccaagtcaagcacgcttaactgtggagttcttatggaa 14820280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 13150430 - 13150611
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  13150430 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 13150529  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  13150530 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 13150611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 31284152 - 31284333
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||| | | ||||||||| ||||| ||||||| |||  |||||| ||   ||||||||||||| ||    
T  31284152 attgccgactgaccccacaaaccaacacgagtcttttcggcgtgttttgtccccactcgcacgcttgtcggaaaacttcccggcaggtcacccatcccaa 31284251  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  31284252 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 31284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 50348016 - 50347835
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| ||| ||| |||||||  |   ||||||||||||| ||    
T  50348016 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttatcgggaaacttctcggtaggtcacccatcccaa 50347917  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  50347916 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccaaaaagaagatgcatcttgttgatatag 50347835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 8067550 - 8067403
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||| ||||| |||||| |||||||||||||||||| | ||||||||| ||||| ||||||| ||| ||||||| ||   ||||||||||||| ||    
T  8067550 attgccgattgacctcacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttatcgggaaacttcccggtaggtcacccatcccaa 8067451  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  |||||||||| |||||||||||||||||||    
T  8067450 aattgctccaagtcaagcacgcttaactatggagttcttatggaatga 8067403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 11179910 - 11180091
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||||||| |||  || ||||| | ||   ||||||||||||| ||    
T  11179910 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacacttaccgggaaacatcccggtaggtcacccatcccaa 11180009  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  11180010 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 11180091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 158 - 336
Target Start/End: Complemental strand, 28562011 - 28561835
Alignment:
Q  158 ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaatt 257  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   |||||| |||||| ||||||    
T  28562011 ccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttccccgtaggtca-ccatcccaaaatt 28561913  T
Q  258 gttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    | |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  28561912 gctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 28561835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 299
Target Start/End: Original strand, 32386610 - 32386755
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| ||||||||||||||| || | ||||||||| |||||  ||||||  | |||||||||||    |||||||||||| ||    
T  32386610 attgccgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcggacgcttaccaagaaactttccggtgggtcacccatcccaa 32386709  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||    
T  32386710 aattgctccaagtcaagcacgcttaactgtggagttcttatggaat 32386755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 16811649 - 16811504
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| |  |||||||| ||||| || |||| ||| ||||||| ||   ||||||||||||| ||    
T  16811649 attgccgactgaccccacaaaccaacacgagtcttttcagcg--ttttgtcctcactcgcatgcttatcgggaaacttcccggtaggtcacccatcccaa 16811552  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||| ||||||||||||||    
T  16811551 aattgctccaagtcaagcacgcttaactgtggaattcttatggaatga 16811504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 27187205 - 27187353
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||| |||| ||||| ||||||| ||| ||||||| ||   ||||||||||||| |    
T  27187205 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttatcgggaaacttcccggtaggtcacccatccca 27187304  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||| || | |||||  |||||||||||||||||||||||| |||||    
T  27187305 aaattgctcaaagtcaagcacgcttaactgtggagttcttatgaaatga 27187353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 13149975 - 13150122
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||  ||| |||  |||||||||| ||   ||||||||||| | ||    
T  13149975 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacacttaccgagaaacttcccggtaggtcacccattccaa 13150074  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  13150075 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 13150122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 145 - 295
Target Start/End: Complemental strand, 3900079 - 3899929
Alignment:
Q  145 attttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcac 244  Q
    ||||| || ||||| ||||||||||||| |||||||||||||||||||    |||||||||| |||||||||||||| | ||||||||||| ||||||||    
T  3900079 attttcagaattgctgactgaccccacagatcaacacgagtcttttcaccttgttttgtccatactcacacgctttttgggaaactttccagaaggtcac 3899980  T
Q  245 ccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatg 295  Q
    |||| | ||||||| |||| |||||  | |||| | |||||||||||||||    
T  3899979 ccataccaaaattgctccaagtcaagcatgctttattgtggagttcttatg 3899929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 39653434 - 39653253
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  39653434 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 39653335  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  || ||||||||||||||||| ||||||||| |||        |||||||||||||||||||||||    
T  39653334 aattgctccaagtcaagcacacttaactgtggagttctcatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 39653253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 151 - 298
Target Start/End: Complemental strand, 14814222 - 14814075
Alignment:
Q  151 agtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcc 250  Q
    ||||||||||||| |||||||||| |||||||||||||||||| | ||||||||  ||||| |||||||  || ||||| || |   ||||||||||||     
T  14814222 agtattgccgactaaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacgcttaccgggaaacctttcggtaggtcacccatca 14814123  T
Q  251 taaaattgttccatgtcaaatacgcttaactgtggagttcttatggaa 298  Q
     ||||||| |||| |||||  |||||||||||||||||||||||||||    
T  14814122 caaaattgctccaagtcaagcacgcttaactgtggagttcttatggaa 14814075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 32227097 - 32227244
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| ||||||||||||||||| || ||||| ||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  32227097 attgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 32227196  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  |||||||||||||||||||||||| |||||    
T  32227197 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatga 32227244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 32227770 - 32227623
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||| ||||| ||||||||||||||||| || ||||| ||| ||||| ||| ||| ||| ||||||| ||   ||||||||||||| ||    
T  32227770 attgtcgactgaccctacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttatcgggaaacttcccggtaggtcacccatcccaa 32227671  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  |||||||||||||||||||||||| |||||    
T  32227670 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatga 32227623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 142 - 336
Target Start/End: Original strand, 25802412 - 25802605
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||| ||||  ||||||||| ||||| ||||||  |||||||||| | |||||| ||  |||| ||| ||||||||||||||| | | |||||    
T  25802412 acgactttaagcattgttgactgaccctacaaaccaacacacgtcttttcagcgtgttttgaccttactcgcactcttttcgagaaacttcctagaaggt 25802511  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||||| | |  |||| |||||| ||||||||||||||| |||||||||||||  ||||       |||||||||||||||||||||||    
T  25802512 cacccgtcctaagactactccaagtcaaacacgcttaactgtggatttcttatggaatgggctat-cgaaaagaagatgcatcttgttgatatag 25802605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 299
Target Start/End: Complemental strand, 37045316 - 37045160
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| || |||| ||| |||   | ||   ||    
T  37045316 agacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttatcgggaa---tcccggtag 37045220  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||||||||| || | |  |||| |||||  ||||||||||||||||||||||||||||    
T  37045219 gtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaat 37045160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 25238546 - 25238706
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||  ||||||||| ||||  ||||| |||||||||||||||||| | ||||||||| ||||| || ||||  | | |||||| || | ||    
T  25238546 agacgactttaaccattgccgaccgaccatacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccaaaaaacttcccgatag 25238645  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||||| |||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  25238646 gtcaccaatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 25238706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 140 - 336
Target Start/End: Original strand, 4067222 - 4067417
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||||||||||||| ||||| ||||||  |||||||||| | ||||||||| ||||  |||||||  |   |||||||||   ||    
T  4067222 agacgactttaagcattgccgactgaccctacaaaccaacactggtcttttcagcgtgttttgtcctcacttgcacgcttaccagaaaactttccggtag 4067321  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||| |||||| || | |  |||| |||||  |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  4067322 gtcatccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatgtaatgagcta-ccaaaaagaagatgcatcttgttgatatag 4067417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 16811195 - 16811048
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||| ||||||||||| |||||||| ||||||||| |  |||||||| ||||| |||||||   | ||||||| ||   ||||||||||||| ||    
T  16811195 attgccgaccgaccccacaaaccaacacgaatcttttcagcgtattttgtcctcactcgcacgcttacggggaaacttcccggtaggtcacccatcccaa 16811096  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| | || |||||  || ||||| |||| ||||||||||||||||    
T  16811095 aattgctacaagtcaagcacacttaaatgtgaagttcttatggaatga 16811048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 20884981 - 20885139
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||| ||||| ||||||||| ||||| |||||||||||||||||| | |||||||||  |||  |||||||  || |||| || ||   ||||    
T  20884981 acgactttaagcattgcagactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctaacttgcacgcttaacgggaaatttcccggtaggt 20885080  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||||| || | |  |||| |||||  |||||||| ||||||||||||||||||||    
T  20885081 cacccatccaaatactactccaagtcaagcacgcttaattgtggagttcttatggaatg 20885139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 7477476 - 7477319
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 238  Q
    ||||||| |||||| |||| |||||||||||||| | ||||| |||||||||||  | | ||||| | ||||| |||||||| ||||||| || ||| ||    
T  7477476 tagacgactttaagaattgtcgactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctttccgagaaatttcccataa 7477377  T
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| ||||||||| | |  || | |||||  | |||||| ||||||||||||||||    
T  7477376 ggtcagccatcctaagactactctaagtcaagcatgcttaaatgtggagttcttatgg 7477319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 25238991 - 25239068
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| |||||||||||||    
T  25238991 acgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgctt 25239068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 160 - 295
Target Start/End: Original strand, 53150694 - 53150829
Alignment:
Q  160 gactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgt 259  Q
    |||||||||||||||  |||| |||||||||||    ||||||||| ||||| | ||||||| | |||||||  || |||||||||||||| |||||||     
T  53150694 gactgaccccacaaactaacatgagtcttttcaacatgttttgtcctcactcgcccgctttttgggaaacttctcataaggtcacccatcccaaaattgc 53150793  T
Q  260 tccatgtcaaatacgcttaactgtggagttcttatg 295  Q
    |||| || ||  ||| ||||||||| ||||||||||    
T  53150794 tccaagttaagcacggttaactgtgaagttcttatg 53150829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 39641208 - 39641060
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    ||||||||||||  |||||||||| |||| |||||||||||  |||||||||||||  |||||||| ||||| ||| ||| |||              ||    
T  39641208 agacgattttaaacattgccgacttaccctacaaatcaacataagtcttttcagtgcattttgtcctcactcgcacacttatcgt-------------ag 39641122  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||| |||| || | || |||| |||||| ||||||||||||||||||||||||||||||    
T  39641121 gtcaccaatccaaagactgctccaagtcaaacacgcttaactgtggagttcttatggaatga 39641060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 335
Target Start/End: Complemental strand, 41472499 - 41472390
Alignment:
Q  225 gaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatc 324  Q
    ||||||||||   ||||||||||||| ||||||||| || |||||  ||| ||||| |||||||||||||||||||| |||        |||||||||||    
T  41472499 gaaactttccggtaggtcacccatcccaaaattgtttcaagtcaagcacgtttaaccgtggagttcttatggaatgatcta-ccgaaaagaagatgcatc 41472401  T
Q  325 ttgttgatata 335  Q
    |||||||||||    
T  41472400 ttgttgatata 41472390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 41473811 - 41473746
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||| |||||||||||||||| ||||||| |||||||||| | ||||||||| ||||| |||||||    
T  41473811 attggcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgctt 41473746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 16462863 - 16462903
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  16462863 ttgaggggtagtgttagaactttatattatttagtatgttt 16462903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 25230587 - 25230727
Alignment:
Q  160 gactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgt 259  Q
    ||||||||| ||||| |||||||||||||| ||| | ||||||  | ||||| |||||||  || ||||||| |||  ||| |||||||| ||| | |      
T  25230587 gactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaacttcccagtagggcacccatcataagactac 25230686  T
Q  260 tccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| |||||  |||||||| ||| ||||||||||||||||    
T  25230687 tccaagtcaagcacgcttaattgttgagttcttatggaatg 25230727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 160 - 300
Target Start/End: Original strand, 25238174 - 25238314
Alignment:
Q  160 gactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgt 259  Q
    ||||||||| ||||| |||||||||||||| ||| | ||||||  | ||||| |||||||  || ||||||| |||  ||| |||||||| ||| | |      
T  25238174 gactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaacttcccagtagggcacccatcataagactac 25238273  T
Q  260 tccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| |||||  |||||||| ||| ||||||||||||||||    
T  25238274 tccaagtcaagcacgcttaattgttgagttcttatggaatg 25238314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 28561820 - 28561768
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  28561820 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 28561768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 362 - 414
Target Start/End: Complemental strand, 39641010 - 39640958
Alignment:
Q  362 tcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||    
T  39641010 tcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggat 39640958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 7477265 - 7477222
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  7477265 ttcttataagccttccttcaaccatgcagtctcatacctgcacg 7477222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 7493955 - 7493912
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  7493955 ttcttataagccttccttcaaccatgcagtctcatacctgcacg 7493912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 25230112 - 25230270
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||| |||| |||||||||| ||||| |||||| ||||||| ||  | ||||||||| ||||| | |||||  ||  |||||| |  | ||||    
T  25230112 acgactttaagcattgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaacttcctgataggt 25230211  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||||||| ||| | |  |||| |||||  |||| |||||||||||||||||| |||||    
T  25230212 cacccatcataagactactccaagtcaagcacgcataactgtggagttcttattgaatg 25230270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 25237699 - 25237857
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||| |||| |||||||||| ||||| |||||| ||||||| ||  | ||||||||| ||||| | |||||  ||  |||||| |  | ||||    
T  25237699 acgactttaagcattgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaacttcctgataggt 25237798  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||||||| ||| | |  |||| |||||  |||| |||||||||||||||||| |||||    
T  25237799 cacccatcataagactactccaagtcaagcacgcataactgtggagttcttattgaatg 25237857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 296
Target Start/End: Complemental strand, 7494166 - 7494009
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 238  Q
    ||||||| |||||| |||| |||||||||||||| | ||||| |||||||||||  | | ||||| | ||||| |||||||| || |||| || | | ||    
T  7494166 tagacgactttaagaattgtcgactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctttacgggaaatttcctagaa 7494067  T
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| |||| |||| |    |||| |||||  | |||||| ||||||||||||||||    
T  7494066 ggtcagccatgctaagacaactccaagtcaagcatgcttaaatgtggagttcttatgg 7494009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 30529963 - 30529811
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| |||||||||| ||||  |||| |||||| |||||||| || | ||||||||| ||||| || ||||   | ||||||| |||  |||||||||    
T  30529963 tttaagcattgccgactaaccctgcaaaccaacacaagtctttttagcgtgttttgtcctcactcgcatgcttactgggaaactt-ccagtaggtcaccc 30529865  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| || | |  |||| |||||  |||||||||| || |||||||||||||||    
T  30529864 atccaaagactactccaagtcaagcacgcttaactatgaagttcttatggaatg 30529811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 32797007 - 32797060
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||||||||||| ||| |||||||| || |||||||||||    
T  32797007 ttcttataagtcttgcttcaaccatgtagtttcatacctacatggtctcaggat 32797060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 240 - 301
Target Start/End: Complemental strand, 41474181 - 41474120
Alignment:
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||| |||||||||||| |||||  |||||| ||||||||||| |||| ||||||    
T  41474181 gtcacccatcccaaaattgttccaagtcaagcacgcttgactgtggagtttttatagaatga 41474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 242
Target Start/End: Complemental strand, 18318925 - 18318837
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtc 242  Q
    |||||||| || ||| ||||| |||| ||| ||||||||| | ||||||| | ||||| |||||||| ||||||||||| || ||||||    
T  18318925 attgccgattgtcccaacaaaccaacccgaatcttttcagcgtgttttgttctcactcgcacgctttgcgagaaacttttcagaaggtc 18318837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 39653238 - 39653186
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    ||||||||||  || |||||||||||||||| ||||||||||||| |||||||    
T  39653238 ttcttataagctttccttcaaccatgcagtcccatacctgcacggcctcagga 39653186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 211
Target Start/End: Original strand, 25230959 - 25231030
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 211  Q
    |||||| |||||  ||||||||| ||||  ||||| |||||||||||||||||| | ||||||||| |||||    
T  25230959 agacgactttaaccattgccgaccgaccatacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 25231030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 300
Target Start/End: Complemental strand, 25248382 - 25248235
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtc-ttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    |||| ||||| ||| |||||||||||||||||| ||||||  | ||||||||| ||||| |||||||  || ||||||| ||   |||||| ||||| ||    
T  25248382 attgtcgactaacctcacaaatcaacacgagtctttttcaacgtgttttgtcctcactcgcacgcttaccgtgaaacttcccggtaggtcatccatcata 25248283  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    | | |  |||| |||||  ||||| ||| |||||||| ||||||||||    
T  25248282 agactactccaagtcaagcacgctgaaccgtggagttattatggaatg 25248235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 396
Target Start/End: Complemental strand, 29224398 - 29224363
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcata 396  Q
    |||||||||||||| |||||||||||||||||||||    
T  29224398 ttcttataagtcttccttcaaccatgcagtctcata 29224363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 296
Target Start/End: Complemental strand, 29224511 - 29224452
Alignment:
Q  237 aaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    |||||||||||||| ||||||| |||| |||||  |||||||| |||| |||||||||||    
T  29224511 aaggtcacccatcccaaaattgctccaagtcaagcacgcttaattgtgaagttcttatgg 29224452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 404
Target Start/End: Original strand, 31284348 - 31284391
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  31284348 ttcttataagccttccttcaaccatgcagtcccatacctgcacg 31284391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 15377482 - 15377412
Alignment:
Q  226 aaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    |||||| ||| |||||||||||||| ||||||| |||| |||||  ||  |||||||||||||||| ||||    
T  15377482 aaacttcccagaaggtcacccatcccaaaattgatccaagtcaagcacatttaactgtggagttctaatgg 15377412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 226 - 296
Target Start/End: Complemental strand, 15411153 - 15411083
Alignment:
Q  226 aaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    |||||| |||||||||||||||||| ||||||| |||| |||||  ||  |||||| ||||||||| ||||    
T  15411153 aaacttcccaaaaggtcacccatcccaaaattgatccaagtcaagcacatttaactttggagttctaatgg 15411083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 182
Target Start/End: Complemental strand, 15417200 - 15417158
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacg 182  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||    
T  15417200 agacgactttaattattgccaactgaccccacaaatcaacacg 15417158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 301
Target Start/End: Complemental strand, 2911247 - 2911218
Alignment:
Q  272 acgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||||||||||||||||||||||    
T  2911247 acgcttaactgtggagttcttatggaatga 2911218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 2911366 - 2911289
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||| |||||| |||| ||| ||| || ||||| |||||||||||||||||  | ||||||||| ||||| |||||||    
T  2911366 acgactttaagcattgtcgattgatcctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgctt 2911289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 364 - 413
Target Start/End: Complemental strand, 14814020 - 14813971
Alignment:
Q  364 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    ||||||| ||| ||| |||||||||||||||||||| ||||| |||||||    
T  14814020 ttataagccttcctttaaccatgcagtctcatacctacacggcctcagga 14813971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 296
Target Start/End: Complemental strand, 15392332 - 15392183
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    ||||| ||||| | |||||||||||||||||||||| ||  ||||||   | ||||||  || ||| || ||||| |   || || ||| |||||  |||    
T  15392332 tttaattattgtcaactgaccccacaaatcaacacgggttctttcagcatgctttgtcttcagtcatacactttttggagaatttcccataaggtttccc 15392233  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||| |||||||| ||||||||||  || ||||| ||||||||||||||||    
T  15392232 atcttaaaattgatccatgtcaagcacacttaaatgtggagttcttatgg 15392183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 296
Target Start/End: Complemental strand, 15405823 - 15405674
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||| |||||| || ||||||  ||||| ||||||| ||  |||||| | | ||||||| ||||  ||| ||||| |  |||||| ||| ||||||||||    
T  15405823 tttatgtattgtcgcctgaccttacaaaccaacacgggttctttcagcgtgctttgtcctcacttgcacacttttaggaaaacttcccagaaggtcaccc 15405724  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    |||| ||||||| |||| |||||  ||  |||||| ||||||||| ||||    
T  15405723 atcccaaaattgatccaagtcaagcacatttaactttggagttctaatgg 15405674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 30529761 - 30529708
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||| | ||||||||    
T  30529761 ttcttataagccttacttcaaccatgtagtctcatacctacacagcctcaggat 30529708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 406
Target Start/End: Original strand, 32386806 - 32386851
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggt 406  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||||||    
T  32386806 ttcttataagccttccttcaaccatacagtcccatacctgcacggt 32386851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 41472374 - 41472322
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||||||||||||||||| |||  ||||||||    
T  41472374 ttcttataag-cttccttcaaccatgcagtctcatacctgtacgacctcaggat 41472322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 42531185 - 42531226
Alignment:
Q  86 tttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    ||||||||  ||||||||||||||||| ||||||||||||||    
T  42531185 tttgagggttagtgttagaactttatactatttagtatgttt 42531226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 126
Target Start/End: Original strand, 814167 - 814195
Alignment:
Q  98 tgttagaactttatattatttagtatgtt 126  Q
    |||||||||||||||||||||||||||||    
T  814167 tgttagaactttatattatttagtatgtt 814195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 300
Target Start/End: Original strand, 25239071 - 25239099
Alignment:
Q  272 acgcttaactgtggagttcttatggaatg 300  Q
    |||||||||||||||||||||||||||||    
T  25239071 acgcttaactgtggagttcttatggaatg 25239099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 80; Significance: 2e-37; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 19236 - 19089
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||  || ||||||| ||   ||||||||||||| ||    
T  19236 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaa 19137  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  |||||||||||||||||||||||| |||||    
T  19136 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatga 19089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 19040 - 18987
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||| ||||    
T  19040 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctctggat 18987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 80; Significance: 2e-37; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 163010 - 163157
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||| ||||||||| |||||||||||||||||| | ||||||||| |||||  ||||||  |||||||||| || | ||||||||||||| ||    
T  163010 attgccgactggccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgaacgcttaccgagaaacttcccgataggtcacccatcccaa 163109  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  163110 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 163157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 162553 - 162701
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtc-ttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    ||||||||||||||||||||| ||||||||||| ||||||| | ||||||||| ||||| ||||||| ||| ||||||| |    ||||||| ||||| |    
T  162553 attgccgactgaccccacaaaccaacacgagtctttttcagcgtgttttgtcctcactcgcacgcttatcgcgaaacttccaggtaggtcactcatccca 162652  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    || ||| |||| |||||  ||||||||||| ||||||||||||||||||    
T  162653 aagttgctccaagtcaagcacgcttaactgcggagttcttatggaatga 162701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 140 - 293
Target Start/End: Complemental strand, 163355 - 163202
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| ||| || |||| |||| ||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||   | |||||||  |   ||    
T  163355 agacgactttcaggattgtcgacagaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttctcggtag 163256  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttctta 293  Q
    ||||||||||| ||||||| |||| |||||  ||||||||||||||| ||||||    
T  163255 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggaattctta 163202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 69691 - 69838
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||| || ||||| ||||||||||||||| || | | ||||||  |||||||||||||| | | |||||| ||  |||||||||||||| ||    
T  69691 attgccgactgaaccaacaaaccaacacgagtctttttagcgtggtttgtcatcactcacacgctttcccataaacttccctgaaggtcacccatccaaa 69790  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
     | |  |||  |||||   ||| |||||||||||||||||||||||||    
T  69791 gactactcctagtcaagcccgcataactgtggagttcttatggaatga 69838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 162750 - 162803
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  162750 ttcttataagtcttccttcaaccatgcagtcacatacctgtacggcctcaggat 162803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 2e-37; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 35871897 - 35871750
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||||| |||| ||  || |||||||||| | ||||||||||||| ||    
T  35871897 attgccgactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaactttccgataggtcacccatcccaa 35871798  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  35871797 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 35871750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 49998906 - 49998725
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||| ||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  49998906 attgccgactgtccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 49998807  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  49998806 aattgctccaagtcaaacacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 49998725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 296
Target Start/End: Original strand, 14571562 - 14571700
Alignment:
Q  158 ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaatt 257  Q
    ||||||||||||||||| |||||||||||||||||  | ||||||||| ||||||||| |||| |||||||||| ||||||| |||||||||   |||||    
T  14571562 ccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatctcgaaatt 14571661  T
Q  258 gttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    | |||| |||||  |||||||||||||||||||||||||    
T  14571662 gctccaagtcaagcacgcttaactgtggagttcttatgg 14571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 298
Target Start/End: Original strand, 4127288 - 4127432
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||  || ||||||| || | || |||||||||| ||    
T  4127288 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccgatagctcacccatcccaa 4127387  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaa 298  Q
    ||||| |||| | |||  | |||||||||||||||||||||||||    
T  4127388 aattgctccaagccaatcatgcttaactgtggagttcttatggaa 4127432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 23350153 - 23350334
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||   |||||||||  |   |||||| |||||| ||    
T  23350153 attgccgactgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcacacgcttacagagaaacttctcggtaggtcatccatcccaa 23350252  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||| || ||||||||||||| || |||        |||||||||||||||||||||||    
T  23350253 aattgctccaagtcaagcacgcttaactatgaagttcttatggaaggagcta-ccgaaaagaagatgcatcttgttgatatag 23350334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 44470731 - 44470892
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||  ||||||||| ||||| |||||||||||||| ||| | ||||||||| ||||| |||||||  || ||||||| ||   ||    
T  44470731 agacgactttaagaattgttgactgaccctacaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtag 44470830  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||| |||||| ||||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  44470831 gtcaaccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 44470892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 14572024 - 14572163
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||||||| |||| |||||||||||||||||  | ||||||||| |||||||||||||| |||||||||| ||| |||||||||||||  ||    
T  14572024 attgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatctcaa 14572123  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| || | |||||  ||||||   ||||||||||||||||    
T  14572124 aattgctctaagtcaagcacgctt---tgtggagttcttatgg 14572163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 299
Target Start/End: Original strand, 7678492 - 7678637
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| | |||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  7678492 attgtcgactgaccccacaaacctacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 7678591  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||| |||| |||||  || |||||||||||||||||||||||||    
T  7678592 aattgctccaagtcaagcacacttaactgtggagttcttatggaat 7678637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 23943098 - 23943258
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||    |    
T  23943098 agacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggttg 23943197  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||||||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  23943198 gtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 23943258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 142 - 336
Target Start/End: Original strand, 44471183 - 44471376
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||| |||| |||||||||| ||||| |||||||||||||| |||   ||||||||| ||||| | |||||  || |||| || ||   ||||    
T  44471183 acgactttaagaattgtcgactgaccctacaaaccaacacgagtctttccagcatgttttgtcctcactcgcccgcttaccgggaaatttcccggtaggt 44471282  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||| ||||||| ||||  ||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  44471283 cacccatcccaaaattgctccaaatcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 44471376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 161 - 291
Target Start/End: Original strand, 8467690 - 8467815
Alignment:
Q  161 actgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgtt 260  Q
    |||||||||||||| |||||||||||||||||  | ||||||||| ||||| || ||||| |||||||||| ||| ||||||||||     ||||||| |    
T  8467690 actgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgctttccgagaaacttcccataaggtcaccc-----aaaattgct 8467784  T
Q  261 ccatgtcaaatacgcttaactgtggagttct 291  Q
    ||| |||||  ||||||||||||||||||||    
T  8467785 ccaagtcaagcacgcttaactgtggagttct 8467815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 12691912 - 12692050
Alignment:
Q  197 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||||||| ||||| |||||||  || ||||||| |||  ||||||||||||| ||||||| |||| |||||  |||||||||||||||||||||||||    
T  12691912 gttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgg 12692011  T
Q  297 aatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||        |||||||||||||||||||||||    
T  12692012 aatgagcta-ccgaaaagaagatgcatcttgttgatatag 12692050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 154 - 292
Target Start/End: Complemental strand, 13266356 - 13266218
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||| ||||||||||    ||||| ||| ||||| ||| |||||||  |||||| |||||||||||||||||||||    
T  13266356 attgtcgactgaccccacaaaccaacacaagtcttttcaacatgttttctcctcactcgcacacttttcggaaaacttcccaaaaggtcacccatcctaa 13266257  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttctt 292  Q
    ||||  || | |||||  |||||||||||||| ||||||    
T  13266256 aatttctcaaagtcaagcacgcttaactgtggggttctt 13266218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 50398408 - 50398589
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||| ||||| |||||||||||||| |||||  |||||||| ||||| |||||||  ||  |||||| ||   |||||||||||| |||    
T  50398408 attgccgactgaccctacaaaccaacacgagtctttccagtgtattttgtcctcactcgcacgcttaccggtaaacttcccggtaggtcacccatcataa 50398507  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
     | |  |||| |||||  |||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||||    
T  50398508 gaatactccaagtcaagcacgcttaactatggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 50398589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 160 - 296
Target Start/End: Original strand, 27578333 - 27578469
Alignment:
Q  160 gactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgt 259  Q
    |||||| |||||||| || ||||||||||||| | | ||||||||| ||||| ||||||| |||  |||||| ||| |||||| | ||||| ||||||||    
T  27578333 gactgatcccacaaaccatcacgagtcttttctgcgtgttttgtcctcactcgcacgcttgtcggaaaacttcccagaaggtcgctcatcccaaaattgt 27578432  T
Q  260 tccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    || | |||||  |||||||||| ||||||||||||||    
T  27578433 tcgaagtcaagcacgcttaactatggagttcttatgg 27578469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 300
Target Start/End: Original strand, 1645607 - 1645765
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||| |||||| |||||||| ||||| |||||||||||||||||  | ||||||||| ||||| |||||||    |||||||| |    ||||    
T  1645607 acgactttaagcattgccaactgaccctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttacaaagaaacttcctggtaggt 1645706  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  1645707 cacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 1645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 139 - 297
Target Start/End: Complemental strand, 3169491 - 3169333
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 238  Q
    ||||||| ||||||||||||| |||||||| ||||| |||||||||| ||||||  | ||||||||| ||||| |||||||  | ||||||||||    |    
T  3169491 tagacgactttaagtattgccaactgaccctacaaaccaacacgagtattttcaacgtgttttgtcctcactcgcacgcttaccaagaaactttctggta 3169392  T
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgga 297  Q
    |||||| ||||| || | |  |||| |||||  |||||||| |||||||||||||||||    
T  3169391 ggtcactcatccaaagactactccaagtcaagcacgcttaagtgtggagttcttatgga 3169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 301
Target Start/End: Complemental strand, 4185990 - 4185838
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||||||||  ||||||||| |||||| ||||| |||||||| |||| ||||||||| || ||||||||||||||||||| ||  || |||||||||     
T  4185990 tttaagtattgttgactgaccc-acaaattaacac-agtctttttagtgtgttttgtcctcattcacacgcttttcgagaaatttcgcataaggtcacct 4185893  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||| ||||||| |||| |||||  |  ||||||||| |||||||| | ||||||    
T  4185892 atcccaaaattgctccaagtcaagcatacttaactgtagagttcttgtagaatga 4185838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 17628781 - 17628639
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||| ||||| | |||||| ||||||| ||||| ||||||||| ||||||||||||||  | ||| ||| | | |||||||||||||  ||    
T  17628781 attgccgactgactccacataccaacacaagtctttccagtgtgttttgtcctcactcacacgctttatgggaatcttcctagaaggtcacccatctcaa 17628682  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| |||| ||||   ||||| ||||||||| |||||||||    
T  17628681 aattgctccaagtcaggcacgctcaactgtggaattcttatgg 17628639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 335
Target Start/End: Complemental strand, 21067566 - 21067372
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||  ||||||||| |||||  ||||||||||||||||||| ||||||||| ||||| |||||||  |||||||||||||   ||    
T  21067566 agacgactttaagcattgtggactgacccaacaaactaacacgagtcttttcagtgtgttttgtccccactcgcacgcttaccgagaaactttccggtag 21067467  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatata 335  Q
    ||||||| ||| || | |  |||| |||||  |||||||| |||||||| ||| | |||||| |||        ||||||||||||||||||||||    
T  21067466 gtcacccctccaaagactactccaagtcaagcacgcttaattgtggagtacttttagaatgagcta-ccggaaagaagatgcatcttgttgatata 21067372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 154 - 298
Target Start/End: Original strand, 24629306 - 24629447
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||||||||||||  ||||||||||||||||| | ||||||||| ||||| |||||||  || |    || ||   ||||||||||||| ||    
T  24629306 attgccgactgaccccacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggg---tttcccggtaggtcacccatcccaa 24629402  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaa 298  Q
    ||||| |||| |||||  ||||||||||||||| |||||||||||    
T  24629403 aattgctccaagtcaagcacgcttaactgtggaattcttatggaa 24629447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 148 - 297
Target Start/End: Original strand, 27578773 - 27578922
Alignment:
Q  148 ttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccca 247  Q
    |||||||||  ||| |||||| |||||||||||| |||||||||||   | ||||||| ||||| ||||||||  | ||||||| ||| |||||||| ||    
T  27578773 ttaagtattctcgattgaccctacaaatcaacacaagtcttttcagcatgatttgtcctcactcgcacgctttctgggaaacttcccagaaggtcacgca 27578872  T
Q  248 tcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgga 297  Q
    ||| ||||| | |||| || ||  ||||||||||||| ||||||||||||    
T  27578873 tcccaaaatcgctccaagttaagcacgcttaactgtgtagttcttatgga 27578922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 158 - 295
Target Start/End: Complemental strand, 41870184 - 41870047
Alignment:
Q  158 ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaatt 257  Q
    |||||| ||||||||||| ||||||||||||||||| | ||| ||||  | || ||||||||||||| ||||||| || ||||||  |||||| ||||||    
T  41870184 ccgactaaccccacaaataaacacgagtcttttcagcgtgttctgtcatcccttacacgcttttcgaaaaacttttcagaaggtcttccatcccaaaatt 41870085  T
Q  258 gttccatgtcaaatacgcttaactgtggagttcttatg 295  Q
    | || |||||||| | || ||| |||| ||||||||||    
T  41870084 gctctatgtcaaacatgcataattgtgaagttcttatg 41870047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 167 - 299
Target Start/End: Original strand, 4127772 - 4127904
Alignment:
Q  167 cccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgt 266  Q
    |||||||| |||||||||||||||||| | ||||||||| |||||||||||||  ||  ||||||| |   ||||||||||||| ||||||| || | |     
T  4127772 cccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaacttttcggtaggtcacccatcccaaaattgctctaagc 4127871  T
Q  267 caaatacgcttaactgtggagttcttatggaat 299  Q
    |||  |||||||||| || ||||||||||||||    
T  4127872 caagcacgcttaactctgaagttcttatggaat 4127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 176 - 294
Target Start/End: Original strand, 27578178 - 27578296
Alignment:
Q  176 caacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgc 275  Q
    |||||||||||||||||| | ||||||||| ||||| |||| |||  | ||||||| ||| |||||||| ||||| |||| || |||| |||||  ||||    
T  27578178 caacacgagtcttttcagcgtgttttgtcctcactcgcacgttttcagggaaacttcccataaggtcactcatcccaaaactgctccaagtcaagcacgc 27578277  T
Q  276 ttaactgtggagttcttat 294  Q
    ||||||||| |||||||||    
T  27578278 ttaactgtgaagttcttat 27578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 4414245 - 4414322
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||| |||||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||||  |||| |||||||    
T  4414245 acgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagtgtgttttgtcctgactcgcacgctt 4414322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 161 - 300
Target Start/End: Complemental strand, 27026765 - 27026626
Alignment:
Q  161 actgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgtt 260  Q
    |||| |||||||||  ||||||||||||||||| | ||||| ||| || |||||||||||| |  |||||| | | |||||||||| ||| ||||||| |    
T  27026765 actggccccacaaacaaacacgagtcttttcagcgtgttttttcctcagtcacacgctttttggtaaacttcctagaaggtcacccttcccaaaattgct 27026666  T
Q  261 ccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
     || |||||  ||||||||||  | |||||||||||||||    
T  27026665 tcaagtcaagcacgcttaactacgtagttcttatggaatg 27026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 5810104 - 5810038
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttt 220  Q
    |||||||||| |||||||||||||||| |||||||||||| | ||||| ||| ||||||||||||||    
T  5810104 attgccgactaaccccacaaatcaacatgagtcttttcagcgtgttttatcctcactcacacgcttt 5810038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 15268043 - 15268117
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaa 228  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  |||||||    
T  15268043 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaaa 15268117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 148 - 286
Target Start/End: Complemental strand, 40607207 - 40607069
Alignment:
Q  148 ttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccca 247  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||| |  |||||||| |||||  ||||||  ||| |||||||||   ||||||||||    
T  40607207 ttaagcattgccgactgattccacaaatcaacacgagttttttcagcgtattttgtcctcactcgaacgcttaccgataaactttccggtaggtcaccca 40607108  T
Q  248 tcctaaaattgttccatgtcaaatacgcttaactgtgga 286  Q
    ||| ||| ||| ||||  ||||| ||| |||||| ||||    
T  40607107 tcccaaatttgctccaaatcaaacacgtttaactatgga 40607069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 197 - 336
Target Start/End: Original strand, 50814738 - 50814876
Alignment:
Q  197 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||||||| ||||| |||| ||  || ||||||| ||   |||||| |||||| ||||||| |||| |||||  |||||||||||||||||||||||||    
T  50814738 gttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcatccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgg 50814837  T
Q  297 aatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||        |||||||||||||||||||||||    
T  50814838 aatgagcta-ccgaaaagaagatgcatcttgttgatatag 50814876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 142 - 219
Target Start/End: Complemental strand, 7381549 - 7381472
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||| |||||| ||||||||||||||| ||||| ||||||| |||||||||| | ||||||||| ||||| |||||||    
T  7381549 acgactttaagcattgccgactgaccctacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgctt 7381472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 8467866 - 8467919
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  8467866 ttcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggat 8467919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 238 - 336
Target Start/End: Original strand, 24628931 - 24629028
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||||| ||||||| |||| |||||  ||||||||||||||||||||||||||| || |||        |||||||||||||||||||||||    
T  24628931 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaacgagcta-ctgaaaagaagatgcatcttgttgatatag 24629028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 159 - 336
Target Start/End: Complemental strand, 1464411 - 1464236
Alignment:
Q  159 cgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattg 258  Q
    |||| |||||||||||||||||||||| ||||||| | ||| |||||  |||| |||| |||| |  ||||||  || |||||||||||||| |||||||    
T  1464411 cgaccgaccccacaaatcaacacgagt-ttttcagcgtgttgtgtcctaactcgcacgttttttggaaaacttctcagaaggtcacccatcccaaaattg 1464313  T
Q  259 ttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
     |||| || ||  ||||| || |||| |||||||||| ||||| |||        |||||||||||||||||||||||    
T  1464312 ctccaagttaagcacgctaaattgtgaagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 1464236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 294
Target Start/End: Complemental strand, 33765137 - 33764990
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| |||| ||| ||||| |||||| ||||||||||||||| |||| |||||| || | |||||| |||||| || |||  | | | || |||||||    
T  33765137 tttaagcattgtcgattgacctcacaaaccaacacgagtctttttagtgtgttttgacctcgctcacatgctttttgaaaaaactcctagaaagtcaccc 33765038  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttat 294  Q
    |||| ||||||| ||||  ||||  |||||||| |||| |||||||||    
T  33765037 atcccaaaattgatccaaatcaagcacgcttaagtgtgaagttcttat 33764990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 205
Target Start/End: Complemental strand, 35477930 - 35477879
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 205  Q
    ||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  35477930 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcc 35477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 306
Target Start/End: Complemental strand, 42838894 - 42838743
Alignment:
Q  156 tgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaa 255  Q
    ||||||| ||||||| |||||||||| | ||||||||| | |||||||| ||||| ||| |  ||  | ||||||||  | ||||||| |||| | |  |    
T  42838894 tgccgaccgaccccataaatcaacacaaatcttttcagcgtgttttgtctacacttacatgtcttctgggaaactttttagaaggtcatccattccatta 42838795  T
Q  256 ttgttccatgtcaaatacgcttaactgtgga-gttcttatggaatgaactat 306  Q
    |||||| | |||||| ||||||||||||| | ||||||||||||||||||||    
T  42838794 ttgttctaagtcaaacacgcttaactgtgaaagttcttatggaatgaactat 42838743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 51331153 - 51331298
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||| |||||  || |||||||||| ||||| ||||||||| || || ||||||| |||| ||| || ||   |||||||||||| |||    
T  51331153 attgccgactgaccctacaaactaatacgagtcttt-cagtgtgttttgtcctcattcgcacgcttatcga-aaatttcccggtaggtcacccatcataa 51331250  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
     | |  |||| |||||  |||||||||||||||||||||||| |||||    
T  51331251 gaatactccaagtcaagcacgcttaactgtggagttcttatgaaatga 51331298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 361 - 415
Target Start/End: Complemental strand, 21067808 - 21067754
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggatt 415  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||| |||||    
T  21067808 ttcttataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatt 21067754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 147 - 301
Target Start/End: Original strand, 52048540 - 52048684
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||| |||||| ||||||| | |||||| ||||| || ||||||||| | ||||||||| ||||  ||| ||||||||||||||| | | ||||||| ||    
T  52048540 tttatgtattgtcgactgatctcacaaaccaacatgaatcttttcagcgtgttttgtcctcacttgcactcttttcgagaaacttcctagaaggtcatcc 52048639  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    || ||||||||| |||| ||         ||||||||||||||||||||||||||    
T  52048640 at-ctaaaattgctccaagt---------ttaactgtggagttcttatggaatga 52048684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 225 - 298
Target Start/End: Original strand, 11828426 - 11828499
Alignment:
Q  225 gaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaa 298  Q
    |||| |||||| |||||||||||||| |||| || |||| || ||  |||||||||||||||||||||||||||    
T  11828426 gaaattttccagaaggtcacccatcccaaaaatgctccaagtaaagcacgcttaactgtggagttcttatggaa 11828499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 29628733 - 29628786
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||    
T  29628733 ttcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggat 29628786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 12692065 - 12692117
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  12692065 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 12692117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 16871547 - 16871587
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  16871547 ttgaggggtagtgttagaactttatattatttagtatgttt 16871587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 197 - 269
Target Start/End: Original strand, 26200206 - 26200278
Alignment:
Q  197 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaa 269  Q
    ||||||||| ||||||||||||||||| |||||||  |  |||||||||||||| ||||||| |||| |||||    
T  26200206 gttttgtcctcactcacacgcttttcgtgaaacttcgctgaaggtcacccatcccaaaattgctccaagtcaa 26200278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 53854703 - 53854755
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttca 192  Q
    |||||| |||||| |||||||||| |||| |||||||||||||||||||||||    
T  53854703 agacgactttaagcattgccgactaaccctacaaatcaacacgagtcttttca 53854755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 240 - 336
Target Start/End: Original strand, 13613854 - 13613948
Alignment:
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||| || | |  |||| |||||| ||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||||    
T  13613854 gtcacccatccaaagactagtccaagtcaaacacgcttaactgtggagttcttatagaatgaacta--ccgaaagaagatgcatcttgttgatatag 13613948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 21220285 - 21220348
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||| ||| ||||||| |||| |||||| ||||||||||||| ||||||||| ||||||    
T  21220285 aggtcacccgtcccaaaattgctccaagtcaaacacgcttaactgtgtagttcttatagaatga 21220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 238 - 301
Target Start/End: Original strand, 50398947 - 50399010
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||||||||| ||| | |  |||| |||||| ||||||||||||||||||||||||||||||    
T  50398947 aggtcacccatcataagaatactccaagtcaaacacgcttaactgtggagttcttatggaatga 50399010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 300
Target Start/End: Original strand, 23942675 - 23942805
Alignment:
Q  170 acaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaa 269  Q
    ||||| ||||||| ||| |||||  | ||||||||| ||||| ||||||| |   ||||||||||   |||||| |||||| || | |  |||| |||||    
T  23942675 acaaaccaacacgggtcctttcaacgtgttttgtcctcactcgcacgcttatttggaaactttccggtaggtcatccatccaaagactactccaagtcaa 23942774  T
Q  270 atacgcttaactgtggagttcttatggaatg 300  Q
      |||||||||||||||||||||||||||||    
T  23942775 gcacgcttaactgtggagttcttatggaatg 23942805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 176 - 305
Target Start/End: Original strand, 33294784 - 33294913
Alignment:
Q  176 caacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccat-gtcaaatacg 274  Q
    |||||||||||||||||| | ||||||| | ||||  ||| ||||| |||||| |||||| || | || |||| | ||||||||||||  ||| |  |||    
T  33294784 caacacgagtcttttcagcgtgttttgttctcacttgcacactttt-gagaaattttccataatggcatccattccaaaattgttccaaagtcgagcacg 33294882  T
Q  275 cttaactgtggagttcttatggaatgaacta 305  Q
    ||| ||||||||||||||||||| |||||||    
T  33294883 ctttactgtggagttcttatggagtgaacta 33294913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 1645815 - 1645876
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatctca 422  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||| |||| ||||| |||||    
T  1645815 ttcttataagtcttccttcaaccatgtagtcccatacctacacggcctcaagattcctctca 1645876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Original strand, 44471391 - 44471440
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||| ||||    
T  44471391 ttcttataagtcttccttcaaccatgtagtctcatacctgtacggcctca 44471440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 50399059 - 50399112
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| | |||||||||| ||||||||||||||    
T  50399059 ttcttataagccttccttcaaccatgtaatctcatacctacacggtctcaggat 50399112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 300
Target Start/End: Original strand, 29628624 - 29628684
Alignment:
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||||||| || | |  |||| |||||| |||||||||||||||||||||||||||||    
T  29628624 gtcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatggaatg 29628684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 50399374 - 50399335
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcag 193  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  50399374 attgccgactgaccctacaaaccaacacgagtcttttcag 50399335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 406
Target Start/End: Original strand, 2499663 - 2499705
Alignment:
Q  364 ttataagtctttcttcaaccatgcagtctcatacctgcacggt 406  Q
    |||||||| || ||||||||||| |||||||||||||||||||    
T  2499663 ttataagtgttgcttcaaccatgaagtctcatacctgcacggt 2499705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 3169277 - 3169219
Alignment:
Q  364 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatctca 422  Q
    ||||||||||| ||||||||||| |||| ||||||| ||||| |||| ||||| |||||    
T  3169277 ttataagtcttccttcaaccatgtagtcccatacctacacggcctcatgattcctctca 3169219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 299
Target Start/End: Complemental strand, 14351954 - 14351920
Alignment:
Q  265 gtcaaatacgcttaactgtggagttcttatggaat 299  Q
    |||||| ||||||||||||||||||||||||||||    
T  14351954 gtcaaacacgcttaactgtggagttcttatggaat 14351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 17029081 - 17028999
Alignment:
Q  217 cttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||||||||||||| ||| ||| | ||||||||  |||||| |||| |||||  || ||||||| || ||||||||||||||    
T  17029081 cttttcgagaaacttcccataagtttacccatcccgaaattgctccaagtcaagcactcttaactatgaagttcttatggaat 17028999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 299
Target Start/End: Complemental strand, 17029529 - 17029455
Alignment:
Q  225 gaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||||| ||| ||||||||||| || |||| || |||| || ||  || |||||||||||||||||||||||||    
T  17029529 gaaacttcccagaaggtcacccaacccaaaaatgctccaagttaagcactcttaactgtggagttcttatggaat 17029455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 285
Target Start/End: Complemental strand, 17506197 - 17506070
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||| ||| ||||| |||||  | |||||||| || |||||||||    || |||||||||||| ||||||  |||||  |||||||||| ||    
T  17506197 attgtcgactggccctacaaaacaacaatattcttttcaatgtgttttgtcc----tcgcacgcttttcgaaaaacttctcaaaatttcacccatcccaa 17506102  T
Q  254 aattgttccatgtcaaatacgcttaactgtgg 285  Q
    ||||| | || |||||| |||||||| |||||    
T  17506101 aattgattcacgtcaaacacgcttaattgtgg 17506070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 301
Target Start/End: Original strand, 15306079 - 15306108
Alignment:
Q  272 acgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||||||||||||||||||||||    
T  15306079 acgcttaactgtggagttcttatggaatga 15306108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 20930847 - 20930806
Alignment:
Q  373 tttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||||| ||||| ||||||||||||| |||||    
T  20930847 tttcttcaaccatgcaatctcaaacctgcacggtcttaggat 20930806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 193
Target Start/End: Original strand, 29628510 - 29628563
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcag 193  Q
    |||||| || ||| |||||||||||| || |||||||||||||||| |||||||    
T  29628510 agacgacttaaagcattgccgactgatcctacaaatcaacacgagttttttcag 29628563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 422
Target Start/End: Original strand, 51331347 - 51331408
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatctca 422  Q
    |||||||||| ||| ||||||||||| |||| ||||||| ||||| |||| ||||| |||||    
T  51331347 ttcttataagccttccttcaaccatgtagtcccatacctacacggcctcatgattcctctca 51331408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 404
Target Start/End: Complemental strand, 21067353 - 21067313
Alignment:
Q  364 ttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||| |||||| |||||||||||||||||||||| ||||||    
T  21067353 ttattagtcttccttcaaccatgcagtctcatacatgcacg 21067313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 425
Target Start/End: Complemental strand, 41869992 - 41869928
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatctcactc 425  Q
    |||||||||||||| |||||| ||||||||| ||||  || || |||||||||| | ||||||||    
T  41869992 ttcttataagtcttccttcaatcatgcagtcccatatatgtacagtctcaggatccctctcactc 41869928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 154 - 210
Target Start/End: Original strand, 50398864 - 50398920
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacact 210  Q
    ||||||||||||||| ||||| |||||||||||||| ||  | ||||||||| ||||    
T  50398864 attgccgactgaccctacaaaccaacacgagtctttccaacgtgttttgtcctcact 50398920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 76; Significance: 5e-35; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 580 - 433
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||| ||||||| ||   ||||||||||||| ||    
T  580 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttatcgggaaacttcccggtaggtcacccatcccaa 481  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| ||||||||||  |||||||||| ||||| | |||||||||||    
T  480 aattgctccatgtcaagcacgcttaactatggagattttatggaatga 433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 76; Significance: 5e-35; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 3012 - 2865
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||| ||||||| ||    
T  3012 attgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtctcccatcccaa 2913  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  2912 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 2865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 2816 - 2763
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||| ||||||| ||||| ||||||||    
T  2816 ttcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggat 2763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 158 - 296
Target Start/End: Complemental strand, 245814 - 245676
Alignment:
Q  158 ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaatt 257  Q
    ||||||||||||||||| |||||||||||||||||  | ||||||||| ||||||||| |||| |||||||||| ||||||| |||||||||   |||||    
T  245814 ccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatctcgaaatt 245715  T
Q  258 gttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    | |||| |||||  |||||||||||||||||||||||||    
T  245714 gctccaagtcaagcacgcttaactgtggagttcttatgg 245676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 154 - 296
Target Start/End: Complemental strand, 245352 - 245213
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||||||| |||| |||||||||||||||||  | ||||||||| |||||||||||||| |||||||||| ||| |||||||||||||  ||    
T  245352 attgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatctcaa 245253  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| || | |||||  ||||||   ||||||||||||||||    
T  245252 aattgctctaagtcaagcacgctt---tgtggagttcttatgg 245213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 2e-34; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 22026650 - 22026468
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 252  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||| |||||||  || ||||||| || | |||| |||||||| |    
T  22026650 attgccgactgaccccacaaaccaacacgagtcttttcagtgtgtttttgtcctcactcgcacgcttaccgggaaacttcccgataggttacccatccca 22026551  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    | |||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  22026550 atattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 22026468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 22548425 - 22548606
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||   | ||||||| ||   ||||||||||||| ||    
T  22548425 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaa 22548524  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||| ||||||||||| |||        |||||||||||||||||||||||    
T  22548525 aattgctccaagtcaagcacgcttaactgtggagttattatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 22548606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 41658981 - 41659162
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||   | ||||||| ||   |||||||| |||| ||    
T  41658981 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttacagggaaacttcccggtaggtcacctatcccaa 41659080  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||| |||||||||||||||||||||||| ||||| ||||       |||||||||||||||||||||||    
T  41659081 aattgctccaagtcaaacacgcttaactgtggagttcttatgtaatgagctat-cgaaaagaagatgcatcttgttgatatag 41659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 27022215 - 27022361
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| ||||||||||||||| || | ||||||||| ||||| |||||||  | | ||||||||||  ||||||||||||| ||    
T  27022215 attgtcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttaccaa-aaactttccagtaggtcacccatcccaa 27022313  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  27022314 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 27022361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 17103366 - 17103204
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| ||| || |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||    
T  17103366 agacgacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtag 17103267  T
Q  240 gtc-acccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||| |||||||| ||||||| |||| |||||  ||||||||| ||||||||||||||||||||    
T  17103266 gtcaacccatcccaaaattgctccaagtcaagcacgcttaaccgtggagttcttatggaatga 17103204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 140 - 301
Target Start/End: Original strand, 10844477 - 10844638
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| ||| || |||| |||||||||| |||||  ||||||||||||||||| | ||||||||| ||||| || ||||  |||||||||| ||   ||    
T  10844477 agacgacttttaggattgtcgactgaccctacaaacaaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaaacttcccggtag 10844576  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||| ||||||| | || |||||  ||||||||||||||||||||||||||||||    
T  10844577 gtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaatga 10844638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 22548871 - 22549052
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||| ||||| | ||||| ||| ||||| |||||||   | ||||||| ||   ||||||||||||| ||    
T  22548871 attgccgactgaccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaa 22548970  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||| ||||||||||| |||        |||||||||||||||||||||||    
T  22548971 aattgctccaagtcaagcacgcttaactgtggagtttttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 22549052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 154 - 299
Target Start/End: Original strand, 34308811 - 34308956
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||| ||||||||||||||| |||||||||||||||||| | ||||||||| |||||||| ||||  || ||||||| ||   ||||||||||||  ||    
T  34308811 attgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatctcaa 34308910  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||| |||| | |||  ||||||||||||||||||||||||||||    
T  34308911 aattgctccaagccaagcacgcttaactgtggagttcttatggaat 34308956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 25148236 - 25148090
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||| || ||||| |||| || ||| ||||||| ||   ||||||||||||| ||    
T  25148236 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgacctcactcgcacgtttatcg-gaaacttcccggtaggtcacccatcccaa 25148138  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| || | |||||  ||||||||||||||||||||||||||||||    
T  25148137 aattgctcaaagtcaagcacgcttaactgtggagttcttatggaatga 25148090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 25147805 - 25147625
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||| ||||| |||||||||||||||||| | ||||||| | ||||| ||||||| ||  ||||||| ||   ||||||||||||| ||    
T  25147805 attgccgactgaccc-acaaaccaacacgagtcttttcagcgtgttttgtactcactcgcacgcttatcaggaaacttcccggtaggtcacccatcccaa 25147707  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  ||| |||||| ||||||||||||||||||| |||        |||||||||||||||||||||||    
T  25147706 aattgctccaagtcaagcacgattaactatggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 25147625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 299
Target Start/End: Original strand, 34308355 - 34308500
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| || ||||||||||||||| | ||||||||| |||||||| ||||  || ||||||| ||   ||||||||||||  ||    
T  34308355 attgccgactgaccccacaaaccagcacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatctcaa 34308454  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||| |||| | |||  |||||||| |||||||||||||||||||    
T  34308455 aattgctccaagccaagcacgcttaagtgtggagttcttatggaat 34308500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 15818878 - 15818988
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||| | ||||||| ||||| ||| ||||||| ||||||| ||| |||    
T  15818878 agacgactttaagtattgccgactggccccacaaaccaacacaagtcttttcagtgtgctttgtcctcactcgcacacttttcgggaaacttcccagaag 15818977  T
Q  240 gtcacccatcc 250  Q
    ||| |||||||    
T  15818978 gtcgcccatcc 15818988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 154 - 300
Target Start/End: Original strand, 31283528 - 31283673
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||  | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  31283528 attgtcgactgaccccacaaaccaacacgagtcttttcaacgcgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcc-aa 31283626  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||| || | |||||  || ||||||||||||||||||||||||||    
T  31283627 aattgctcaaagtcaagcacacttaactgtggagttcttatggaatg 31283673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 12827130 - 12827311
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| ||||||||||||||| |  | |||||  || ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  12827130 attgtcgactgaccccacaaaccaacacgagtcttttaaaagtgttttaacctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 12827229  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  12827230 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 12827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 140 - 300
Target Start/End: Original strand, 8080204 - 8080364
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| |||| |||||| ||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |||||||||| | |  ||    
T  8080204 agacgactttaagcattgtcgactggccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctagtag 8080303  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    || |||||||| || | |  |||| |||||  ||||||||||||| |||||||||||||||    
T  8080304 gttacccatccaaagactactccaagtcaagcacgcttaactgtgaagttcttatggaatg 8080364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 12100960 - 12100814
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgag-aaactttccaaaaggtcacccatccta 252  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |||| |||||| ||   ||||||||||||| |    
T  12100960 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctta-cgaggaaacttcccggtaggtcacccatcc-a 12100863  T
Q  253 aaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||| |||| |||||  ||||||||||||| |||||||||| |||||    
T  12100862 aaattgctccaagtcaagcacgcttaactgtgaagttcttatgaaatga 12100814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 140 - 336
Target Start/End: Complemental strand, 27926182 - 27925988
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| |||| |||||||||| ||||| ||||||||||||||||||   ||||||||| ||||| ||| |||  || ||||||| ||   |     
T  27926182 agacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaacttcccggtac 27926083  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
     ||||||||||  |||||| |||| |||||  |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  27926082 ctcacccatcc-caaattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 27925988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 2044340 - 2044182
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||| ||||  ||||||||| ||||| ||| |||||||||||||| | ||||||||| ||||| |||||||  ||  |||||| |||  ||||    
T  2044340 acgactttaagcattggtgactgaccctacaaaccaatacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttcccattaggt 2044241  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||||||| || | |  |||| |||||  |||||||||||||||||| ||||||||||    
T  2044240 cacccatccaaagactactccaagtcaagcacgcttaactgtggagttattatggaatg 2044182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 33852127 - 33852280
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| ||||| | ||||||  ||||||||||| ||||||||| || | ||||||||| ||||| ||||||| ||  |||||||||| | |||||||||    
T  33852127 tttaagcattgctgtctgacctgacaaatcaacatgagtctttttagcgtgttttgtcctcactcgcacgcttatcatgaaactttccgataggtcaccc 33852226  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| || | |  |||| |||||  |||||||| |||| |||||||||||||||    
T  33852227 atccaaagactactccaagtcaagcacgcttaattgtgaagttcttatggaatg 33852280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 142 - 300
Target Start/End: Complemental strand, 3745383 - 3745225
Alignment:
Q  142 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 241  Q
    |||| |||||||||| | || |||||| ||||||||||| ||||||||||||   ||||| |   || |||||||||||| |||||||||  || | |||    
T  3745383 acgactttaagtattactgaatgacccaacaaatcaacatgagtcttttcagcatgttttattatcattcacacgctttttgagaaacttctcagatggt 3745284  T
Q  242 cacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    || |||||| ||||||| || | |||||  |||||| ||||||||||| ||||||||||    
T  3745283 cagccatcccaaaattgctctaagtcaagcacgcttgactgtggagttattatggaatg 3745225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 294
Target Start/End: Original strand, 15567871 - 15568025
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||||||||||||||| ||||||| |  |||||| ||||||| |  | ||||||||| ||||| |||  ||| |||||||||| | | ||     
T  15567871 agacgactttaagtattgccgactggccccacatactaacacgggtctttttaacgtgttttgtcctcactctcacattttccgagaaacttcctagaaa 15567970  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttat 294  Q
     |||||||||| ||||||| ||   ||||| ||||||||| ||||||||||||||    
T  15567971 ttcacccatcccaaaattgctctgagtcaagtacgcttaattgtggagttcttat 15568025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 170 - 300
Target Start/End: Complemental strand, 32292651 - 32292521
Alignment:
Q  170 acaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaa 269  Q
    ||||| |||||||||||||||||| | ||||||||| |||||||||||||  ||  |||||| ||   || |||||||||| || | |  |||| |||||    
T  32292651 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaacttcccggtagatcacccatccaaagactactccaagtcaa 32292552  T
Q  270 atacgcttaactgtggagttcttatggaatg 300  Q
      |||||||||||||||||||||||||||||    
T  32292551 gcacgcttaactgtggagttcttatggaatg 32292521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 27819124 - 27819274
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||||||||||||||| |||||||| |||||||||||| | || |||| ||||||||||||||  |  ||||||  || |||||||||||||| ||    
T  27819124 attgtcgactgaccccacaa-tcaacacgggtcttttcagtgtgctt-gtcctcactcacacgctttctggaaaacttatcagaaggtcacccatccaaa 27819221  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactat 306  Q
     | |  || | |||||| || ||||||||||||||| ||||||||||| ||||    
T  27819222 tactactcaaagtcaaacacacttaactgtggagtttttatggaatgagctat 27819274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 28912720 - 28912796
Alignment:
Q  144 gattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttt 220  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||| |||  ||||||||| |||||||| |||||    
T  28912720 gattttaagtattgccgactgaccaaacaaatcaacacgagtccttttagtatgttttgtcctcactcacaagcttt 28912796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 32292211 - 32292115
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcc 250  Q
    ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   |||||||||||||    
T  32292211 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcc 32292115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 21315986 - 21316132
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||| |||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || |||||||  |   ||||||||| | | ||    
T  21315986 attgtcgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg-gaaacttcgcggtaggtcacccttaccaa 21316084  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||  |||| |||||  || ||||||||||||||||||||| |||||    
T  21316085 aattactccaagtcaagcacacttaactgtggagttcttatgaaatga 21316132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 239 - 301
Target Start/End: Complemental strand, 25144957 - 25144895
Alignment:
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    |||||||||||| ||||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  25144957 ggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 25144895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 17103155 - 17103102
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  17103155 ttcttataagtcttccttcaaccatgcagtctcatacctgtacggcctcaggat 17103102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 6466540 - 6466440
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| ||| |||||||||||||| ||||||||| |||||| |||||||| || | | ||||||| |||||  | |||||| ||||||||| |||||||    
T  6466540 agacgactttcagtattgccgactggccccacaaaccaacacaagtctttttagcgtgctttgtcctcactcgtatgctttttgagaaacttcccaaaag 6466441  T
Q  240 g 240  Q
    |    
T  6466440 g 6466440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 293
Target Start/End: Complemental strand, 25308034 - 25307895
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||||||| |||| |||||||||||||||||||||| |   ||||||| ||||| |||||||  ||| |||||||| |  | ||||||||||| ||    
T  25308034 attgccgactgatcccataaatcaacacgagtcttttcagcgtactttgtcctcactcgcacgcttgccgaaaaactttcaagtacgtcacccatccaaa 25307935  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttctta 293  Q
     | |   ||| |||||  | ||||||||||||||||||||    
T  25307934 gactacaccaagtcaagcaagcttaactgtggagttctta 25307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 9251155 - 9251058
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgag-aaactttccaaaaggtcacccatcc 250  Q
    |||| ||| |||||||||||| |||||| ||| ||||||| | ||||||||| |||||||| | ||||| || |||||| || |||||||||||||||    
T  9251155 attgtcgattgaccccacaaaccaacacaagttttttcagcgtgttttgtcctcactcacatgtttttccagaaaacttccctaaaggtcacccatcc 9251058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 28375126 - 28375179
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||    
T  28375126 ttcttataagccttccttcaatcatgcagtctcatacctgcacggcctcaggat 28375179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 30527351 - 30527504
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| |||| ||||||| || |||||||||||||||||||||||| | ||||| ||| ||||| |||||||  || |||  ||||    || ||||||    
T  30527351 tttaagcattgtcgactgatcctacaaatcaacacgagtcttttcagcgtgttttatcctcactcgcacgcttaccgggaagttttcaggtagatcaccc 30527450  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| || |||  || | |||||| |  ||||||||||||||||||||| ||||    
T  30527451 atccaaagattactcaaagtcaaacaatcttaactgtggagttcttatgaaatg 30527504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 33852330 - 33852383
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||| ||||    
T  33852330 ttcttataagttttccttcaaccatacagtctcatacctgcacggtctcgggat 33852383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 22549067 - 22549119
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||||||| |||||||||||||||| ||||||||||| | |||||||    
T  22549067 ttcttataagtcttccttcaaccatgcagtcacatacctgcacagcctcagga 22549119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 404
Target Start/End: Original strand, 41659177 - 41659220
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||||||||| |||||||||||||||| ||||||||||||    
T  41659177 ttcttataagtcttccttcaaccatgcagtcccatacctgcacg 41659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 361 - 411
Target Start/End: Complemental strand, 1297081 - 1297031
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcag 411  Q
    ||||||||||| || ||||||||||||||||||||||||||| | ||||||    
T  1297081 ttcttataagttttacttcaaccatgcagtctcatacctgcatgatctcag 1297031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 166 - 300
Target Start/End: Complemental strand, 3744896 - 3744762
Alignment:
Q  166 ccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatg 265  Q
    ||||||||| |||||||||||||||||||| ||||||| | || | |||| ||||  |||||||||  ||||  |||||| |||| ||||||| || | |    
T  3744896 ccccacaaaccaacacgagtcttttcagtgtgttttgttctcattaacacactttctgagaaacttctcaaatagtcaccaatcccaaaattgctcaaag 3744797  T
Q  266 tcaaatacgcttaactgtggagttcttatggaatg 300  Q
    | ||  | |||||| ||| ||||||||||| ||||    
T  3744796 ttaataaagcttaattgtagagttcttatgaaatg 3744762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 219
Target Start/End: Original strand, 6463404 - 6463485
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatc-aacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    ||||||| |||||| |||| |||||||||| | ||| | ||||||||||||||||| | ||||||||| ||||| |||||||    
T  6463404 tagacgactttaagcattgtcgactgaccctaaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctt 6463485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 300
Target Start/End: Complemental strand, 10729908 - 10729747
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 238  Q
    ||||||| ||| ||||||||| ||| || |  ||||  ||||||||||||||||| | | ||||||||||||| ||||||||    || | || ||| ||    
T  10729908 tagacgactttcagtattgccaactaactcttcaaaataacacgagtcttttcagcgtgctttgtccacactcgcacgctttctaggatatttcccataa 10729809  T
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||||||||||  || | |  |||| ||| |  |||||||| ||||||||||||||||||||    
T  10729808 ggtcacccatcaaaagactactccaagtctatcacgcttaattgtggagttcttatggaatg 10729747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 25147610 - 25147557
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||||||||||||||||| ||| |||| |||||    
T  25147610 ttcttataagccttccttcaaccatgcagtctcatacctacacagtcttaggat 25147557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 29971473 - 29971526
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||| |||| ||||||||||| |||||||||||| ||||| ||||||||    
T  29971473 ttcttataaatcttccttcaaccatgtagtctcatacctacacggcctcaggat 29971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 10844957 - 10844905
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    ||||||||||  || |||||||||||||||| ||||||||||||| |||||||    
T  10844957 ttcttataagctttccttcaaccatgcagtcccatacctgcacggcctcagga 10844905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 22840424 - 22840476
Alignment:
Q  153 tattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 205  Q
    ||||| |||||||||  ||||| |||||||||||||||||||| |||||||||    
T  22840424 tattgtcgactgaccatacaaaccaacacgagtcttttcagtgtgttttgtcc 22840476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 27925973 - 27925921
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||  ||| |||||||||||||||| ||||||||||||| |||||||    
T  27925973 ttcttataatccttccttcaaccatgcagtcccatacctgcacggcctcagga 27925921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 364 - 420
Target Start/End: Original strand, 30334983 - 30335039
Alignment:
Q  364 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggattcatct 420  Q
    |||||||||||  ||||||| ||||||| ||||||||||| |||||||||| |||||    
T  30334983 ttataagtcttctttcaaccttgcagtcgcatacctgcacagtctcaggatccatct 30335039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 3744712 - 3744669
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||    
T  3744712 ttcttataagtcttccttcaaccatgcagtcccatacctacacg 3744669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 413
Target Start/End: Original strand, 10844688 - 10844739
Alignment:
Q  362 tcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    ||||||||| ||| |||||||||||||||| |||||||||| || |||||||    
T  10844688 tcttataagccttccttcaaccatgcagtcccatacctgcaaggcctcagga 10844739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 336
Target Start/End: Complemental strand, 10845035 - 10844972
Alignment:
Q  272 acgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  10845035 acgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 10844972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 10729605 - 10729707
Alignment:
Q  197 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||||||  ||||| ||||||||||  ||||||||||| |||||||  ||||| ||||||| | || | |||  || ||||| |||||||| |||||||    
T  10729605 gttttgtcttcactcgcacgcttttcatgaaactttccataaggtcagtcatcccaaaattgcttcaagccaagcacccttaattgtggagtccttatgg 10729704  T
Q  297 aat 299  Q
    |||    
T  10729705 aat 10729707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 414
Target Start/End: Complemental strand, 12100750 - 12100712
Alignment:
Q  376 cttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  12100750 cttcaaccatgcagtctcatacctgtacggcctcaggat 12100712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 154 - 300
Target Start/End: Complemental strand, 41913240 - 41913094
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||| | |||  ||||||||| ||||||  | ||||||||| ||||  |||||||  | |||||||||| |  ||||||| ||||| ||    
T  41913240 attgtcgactgaccctataaactaacacgagttttttcaacgtgttttgtcctcacttgcacgcttaccaagaaactttctagtaggtcactcatccaaa 41913141  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
     | |  | || |||||  ||||||||||| |||||||||||||||||    
T  41913140 gactacttcaagtcaagcacgcttaactgcggagttcttatggaatg 41913094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 2044132 - 2044079
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||| | ||||||||    
T  2044132 ttcttataagccttccttcaaccatgtagtctcatacctacacagcctcaggat 2044079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 22026453 - 22026404
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||| ||||    
T  22026453 ttcttataagccttcattcaaccatgcagtcccatacctgcacggcctca 22026404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 27021951 - 27022004
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||||||||| |||||| || || ||||||||    
T  27021951 ttcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggat 27022004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 34308551 - 34308604
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||| ||||||||||| || |||| ||||||||    
T  34308551 ttcttataagccttccttcaaccatacagtctcatacttgtacggcctcaggat 34308604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 34309011 - 34309064
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||| ||||||||||| || |||| ||||||||    
T  34309011 ttcttataagccttccttcaaccatacagtctcatacttgtacggcctcaggat 34309064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 22548621 - 22548673
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||  ||| |||||||||||||||| ||||||||||| | |||||||    
T  22548621 ttcttataaaacttccttcaaccatgcagtcacatacctgcacagcctcagga 22548673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 32292471 - 32292419
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    ||||||||||  || |||||||||||||||| ||||| ||||||| |||||||    
T  32292471 ttcttataagcattccttcaaccatgcagtcccatacttgcacggcctcagga 32292419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 413
Target Start/End: Original strand, 1927 - 2175
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| |  |||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  1927 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtattttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 2026  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatagtgatataggtaatactn 353  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||        ||| |||      
T  2027 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag--------gtagtac-- 2115  T
Q  354 nnnnnnnttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
           |||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  2116 caaacaattcttataagccttccttcaaccatgcagtctcatacctgcacggcctcagga 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 74; Significance: 8e-34; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 13409 - 13590
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||    |||||||| ||   ||||||||||||| ||    
T  13409 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacaaagaaacttcccggtaggtcacccatcccaa 13508  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| || | |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  13509 aattgctcaaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 13590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 8e-34; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 30966960 - 30966779
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||| ||||||| |||||||||||||||||  | ||||||||| ||||| |||||||  |||||||||| ||   ||||||||||||| ||    
T  30966960 attgccgactgactccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaacttcccggtaggtcacccatcccaa 30966861  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| || ||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  30966860 aattgctccaagttaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 30966779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 25337873 - 25338054
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  25337873 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 25337972  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  |||||||||||||||||||||||| ||||| ||||       |||||||||||||||||||||||    
T  25337973 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctat-cgaaaagaagatgcatcttgttgatatag 25338054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 30966504 - 30966357
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||  | ||||||||| ||||| || ||||  |||||||||| ||   ||||||||||||| ||    
T  30966504 attgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgagaaacttcccggtaggtcacccatcccaa 30966405  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  |||||||||| |||||||||||||||||||    
T  30966404 aattggtccaagtcaagcacgcttaactatggagttcttatggaatga 30966357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 154 - 292
Target Start/End: Original strand, 32377783 - 32377921
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  ||  |||||| |||  || |||||||||| ||    
T  32377783 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttcccagtagatcacccatcccaa 32377882  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttctt 292  Q
    ||||| |||| |||||| |||||||||||||||||||||    
T  32377883 aattgctccaagtcaaacacgcttaactgtggagttctt 32377921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 33771271 - 33771090
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||| || ||||  || ||||||| ||   ||||||||||||| ||    
T  33771271 attgccggctgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaa 33771172  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||| |||||  | |||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  33771171 aattgctccaagtcaagcatgcttaactgtggagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 33771090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 24818595 - 24818449
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |  ||||||| ||   ||||||||||||| ||    
T  24818595 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccatcc-aa 24818497  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  24818496 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 24818449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 154 - 301
Target Start/End: Original strand, 32377592 - 32377739
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||||||||| |||||||||| ||||||| | ||||||||| ||||| |||||||  ||  |||||||||   |||||||| |||| ||    
T  32377592 attgccgactgaccccacaaaccaacacgagttttttcagcgtgttttgtcctcactcgcacgcttaccggaaaactttccggtaggtcacctatcccaa 32377691  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  | ||||||||||||||||||| ||||||||    
T  32377692 aattgctccaagtcaagcatgcttaactgtggagttcttttggaatga 32377739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 154 - 296
Target Start/End: Original strand, 30961759 - 30961901
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||| ||||||||||||  ||||| |||||||||| || ||||||||| ||||| ||||||||  ||||||||  ||| |||||||||||||| ||    
T  30961759 attgccgattgaccccacaaactaacacaagtcttttcactgtgttttgtcctcactcgcacgctttctgagaaactacccagaaggtcacccatcccaa 30961858  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||| || | |||||  ||| |||||||||||||||||||||    
T  30961859 aattgctctaagtcaagcacgtttaactgtggagttcttatgg 30961901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 140 - 297
Target Start/End: Complemental strand, 15640018 - 15639861
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||||||||||||| || || |||||||||||||||| | | ||||||||| ||||| ||||||| ||||||||||| |||  ||    
T  15640018 agacgactttaagcattgccgactgaccctaccaaccaacacgagtcttttctgcgtgttttgtcctcactcgcacgcttatcgagaaacttcccagtag 15639919  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgga 297  Q
    ||||||||||| || | |  |||| |||||  |||||||| |||||||||||| ||||    
T  15639918 gtcacccatccaaagactactccaagtcaagcacgcttaattgtggagttcttgtgga 15639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 16379214 - 16379061
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |  ||||||| || | |||||||||    
T  16379214 tttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacccggaaacttcccgataggtcaccc 16379115  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  16379114 atccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 16379061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 147 - 300
Target Start/End: Complemental strand, 16379670 - 16379517
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| |||| ||| |||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||   | ||||||| ||   |||||||||    
T  16379670 tttaagcattgtcgaatgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacagtgaaacttcccggtaggtcaccc 16379571  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| || |||  |||| |||||| |||||||||||||||||||||||||||||    
T  16379570 atccaaagattactccaagtcaaacacgcttaactgtggagttcttatggaatg 16379517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 140 - 300
Target Start/End: Complemental strand, 1912808 - 1912648
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||||||||||| | ||||| |||||||||||||||||  | ||||||||| ||||| |||||||  |||||||||| ||   ||    
T  1912808 agacgactttaagcattgccgactgactctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaacttcccggtag 1912709  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    || |||||||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  1912708 gtaacccatccaaagagtactccaagtcaatcacgcttaactgtggagttcttatggaatg 1912648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 176 - 336
Target Start/End: Complemental strand, 8256774 - 8256615
Alignment:
Q  176 caacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgc 275  Q
    ||||| |||||||||||| |  |||||||| ||||| ||||||| |||  |||||| |||  ||||||||||||| ||||||| |||| |||||  ||||    
T  8256774 caacatgagtcttttcagcgtattttgtcctcactcgcacgcttatcggaaaacttcccagcaggtcacccatcccaaaattgctccaagtcaagcacgc 8256675  T
Q  276 ttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    |||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  8256674 ttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 8256615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 154 - 295
Target Start/End: Original strand, 30963139 - 30963280
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||| ||||| |||||| |||||||||||||||||  |  |||| ||| ||||| |||||||| |||||||||| | | |||||||| ||||| ||    
T  30963139 attgccgattgacctcacaaaccaacacgagtcttttcaacgtattttatcctcactcgcacgctttccgagaaacttccaagaaggtcactcatcccaa 30963238  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatg 295  Q
    ||||| |||| |||||  |||||||||||| || ||||||||    
T  30963239 aattgctccaagtcaagcacgcttaactgttgaattcttatg 30963280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 140 - 297
Target Start/End: Complemental strand, 15620186 - 15620025
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaat----caacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttcca 235  Q
    |||||| |||||| ||| ||||||||||| || |||    |||||||||||||||||| ||||||||||| ||||| |||||||  |||||||||| |||    
T  15620186 agacgactttaagcatttccgactgaccctaccaattaaccaacacgagtcttttcagcgagttttgtcctcactcgcacgcttaccgagaaacttccca 15620087  T
Q  236 aaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgga 297  Q
      ||||||||||||| || | |  || | |||||  |||||||| |||||||||||||||||    
T  15620086 gtaggtcacccatccaaagactactcaaagtcaagcacgcttaattgtggagttcttatgga 15620025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 156 - 296
Target Start/End: Original strand, 30963598 - 30963738
Alignment:
Q  156 tgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaa 255  Q
    |||||||||| |||||||| ||| ||||||||||||| || ||||||||| ||||| |||| ||| ||| |||||| | | ||||||||| |||| ||||    
T  30963598 tgccgactgatcccacaaaccaaaacgagtcttttcactgtgttttgtcctcactcgcacggtttccgacaaacttcctagaaggtcacctatcccaaaa 30963697  T
Q  256 ttgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
     |   ||| |||||  |||||||||||||||||| ||||||    
T  30963698 ctccgccaagtcaagcacgcttaactgtggagttattatgg 30963738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 336
Target Start/End: Complemental strand, 41754516 - 41754378
Alignment:
Q  197 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||||||| ||||| |||| ||  || ||||||||||   |||||| |||||| ||||||| |||| |||||  |||||||||||||||||||||||||    
T  41754516 gttttgtcctcactcgcacgtttaccgggaaactttccggtaggtcatccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgg 41754417  T
Q  297 aatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| |||        |||||||||||||||||||||||    
T  41754416 aatgagcta-ccgaaaagaagatgcatcttgttgatatag 41754378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 154 - 336
Target Start/End: Original strand, 5399693 - 5399874
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||| ||||||| ||| | ||||||| | ||||| |||||||  ||  |||||| |    ||||||||||||| ||    
T  5399693 attgtcgactgaccccacaaaccaacacaagtctttccagcgtgttttgttctcactcgcacgcttaccggaaaacttcctggtaggtcacccatcccaa 5399792  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||  |||| |||||  |||||||||| || |||||||||||||||| |||        |||||||||||||||||||||||    
T  5399793 aatttctccaagtcaagcacgcttaactatgaagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 5399874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 238 - 336
Target Start/End: Complemental strand, 11388373 - 11388276
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||||| ||||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  11388373 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 11388276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 300
Target Start/End: Original strand, 25433925 - 25434078
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| ||||||||||||||| ||||| |||||||| ||||||||| | |||||||||  ||||||||||||  |   |||||| ||    ||||||||    
T  25433925 tttaagcattgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtccttactcacacgcttaccagaaaacttccctgttggtcaccc 25434024  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    |||| || |    |||| |||||  |||||||||||||||||||||||||||||    
T  25434025 atccaaagaccactccaagtcaagcacgcttaactgtggagttcttatggaatg 25434078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 154 - 294
Target Start/End: Complemental strand, 13191244 - 13191104
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||| ||| ||| |||||| |||||||| || | ||||||||| || |||||||||||| ||||||||||||| ||||||||| |||  ||    
T  13191244 attgtcgactgactccataaaccaacactagtctttttagcgtgttttgtccgcattcacacgctttttgagaaactttccagaaggtcacctatctcaa 13191145  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttat 294  Q
    ||||  | || |||||  || | ||||| ||||||||||||    
T  13191144 aatttcttcaagtcaagcacacataactatggagttcttat 13191104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 335
Target Start/End: Original strand, 29259504 - 29259676
Alignment:
Q  162 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttc 261  Q
    |||| |||||||| |||||||||||||||||  | ||||||||| ||||| || ||||  || ||||||| ||   ||||||||||||| ||||||| ||    
T  29259504 ctgatcccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctc 29259603  T
Q  262 catgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatata 335  Q
     | |||||  |||||||||| || |||||||||| ||||| |||        ||||||||||||||||||||||    
T  29259604 aaagtcaagcacgcttaactatgaagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatata 29259676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 83287 - 83140
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||| | |||||||||| |||||  |||||| |||  | ||||||||| ||||| ||| ||||  || ||| |  || |||||||||  |||  ||    
T  83287 attgccgaataaccccacaaaccaacataagtcttatcaacgtgttttgtcctcactcgcacactttctgaaaaattaccctaaaggtcacatatcacaa 83188  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||  ||||| |||||||||||| |||||||||||||||||    
T  83187 aattgttccaaatcaaacacgcttaactgtagagttcttatggaatga 83140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 238 - 299
Target Start/End: Complemental strand, 11394719 - 11394658
Alignment:
Q  238 aggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||||||||||| ||||||| |||| |||||  ||||||||||||| ||||||||||||||    
T  11394719 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtgaagttcttatggaat 11394658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 154 - 336
Target Start/End: Complemental strand, 33175226 - 33175047
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||| |||||  ||||||||||||| ||| | ||||||||| ||||| |||||||  || | || || ||   |||||||||||| |||    
T  33175226 attgccgactgaccctacaaactaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccg-ggaatttcccggtaggtcacccatcataa 33175128  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
     | |  |||| ||| || |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  33175127 gaatactccaagtc-aacacgcttaactgtggagttcttatgaaatgagcta-ccaaaaagaagatgcatcttgttgatatag 33175047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 41754363 - 41754314
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  41754363 ttcttataagccttccttcaaccatgcagtctcatacctgcacggcctca 41754314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 8986823 - 8986863
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  8986823 ttgaggggtagtgttagaactttatattatttagtatgttt 8986863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 140 - 295
Target Start/End: Complemental strand, 1707325 - 1707170
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| ||||||||||||||| | |||||||| ||| |||||| || | |||||||   ||||| |||||||  || ||||||| |    ||    
T  1707325 agacgactttaagcattgccgactgaccctataaatcaacgcgaatctttttagcgtgttttgtattcactcgcacgcttaccgggaaacttcctggtag 1707226  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatg 295  Q
    ||||||||||| || | |  | || |||||| || |||||||||||||||||||||    
T  1707225 gtcacccatccaaagactacttcaagtcaaacactcttaactgtggagttcttatg 1707170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 404
Target Start/End: Complemental strand, 1953229 - 1953186
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 404  Q
    |||||||| ||||| |||||||||||||||||||||||||||||    
T  1953229 ttcttataggtcttccttcaaccatgcagtctcatacctgcacg 1953186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 300
Target Start/End: Complemental strand, 8074162 - 8074016
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| ||||||| ||||||||  ||||| ||| ||||||  | ||||||| | || |||||| |||||||||||||||||   |||||||| ||||| ||    
T  8074162 attgtcgactgatcccacaaacaaacacaagttttttcatcgtgttttgttctcaatcacacacttttcgagaaactttctggaaggtcactcatcccaa 8074063  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatg 300  Q
    ||||   ||| |||||  | ||||| || ||||||||||||| ||||    
T  8074062 aatttaaccaagtcaagaaggcttatctatggagttcttatgaaatg 8074016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 154 - 216
Target Start/End: Complemental strand, 20502234 - 20502172
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacg 216  Q
    ||||||||||||||| |||||  ||||||||||||||||| | ||||||||| ||||| ||||    
T  20502234 attgccgactgaccctacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacg 20502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 1707115 - 1707062
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| |||||| |||| |||||||||||| ||| ||||||||||    
T  1707115 ttcttataagtcttccttcaatcatgtagtctcatacctacacagtctcaggat 1707062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 365 - 414
Target Start/End: Complemental strand, 16379463 - 16379414
Alignment:
Q  365 tataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||| ||||    
T  16379463 tataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggat 16379414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 18447990 - 18448043
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||| ||||||||    
T  18447990 ttcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggat 18448043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 246 - 336
Target Start/End: Complemental strand, 29804860 - 29804771
Alignment:
Q  246 catcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||| ||||||| | || |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  29804860 catcccaaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 29804771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 30966308 - 30966255
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||| ||||||||    
T  30966308 ttcttataagccttccttcaaccatgcagtcccatacctgtacggcctcaggat 30966255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Original strand, 25338069 - 25338121
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||  |||||||    
T  25338069 ttcttataagccttccttcaaccatgcagtcccatacctgcacgacctcagga 25338121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 32291050 - 32291090
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  32291050 ttgaggggtagtgttagatctttatattatttagtatgttt 32291090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Complemental strand, 38583705 - 38583665
Alignment:
Q  87 ttgaggggcagtgttagaactttatattatttagtatgttt 127  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  38583705 ttgaggggtagtgttagaactttatattacttagtatgttt 38583665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 376 - 422
Target Start/End: Original strand, 18098965 - 18099011
Alignment:
Q  376 cttcaaccatgcagtctcatacctgcacggtctcaggattcatctca 422  Q
    ||||||||||| |||||||||||| ||||| |||||||||| |||||    
T  18098965 cttcaaccatgtagtctcatacctacacggcctcaggattcctctca 18099011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 246 - 336
Target Start/End: Complemental strand, 16542164 - 16542074
Alignment:
Q  246 catcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||||||||||| |||| |||||| ||  |||||||| ||||| ||||||||||| ||||        ||||| ||||||||||||||||    
T  16542164 catcctaaaattgctccaagtcaaacacatttaactgtagagtttttatggaatgagctataaaaaaaaaagatacatcttgttgatatag 16542074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 24818400 - 24818347
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||| |||||||||||| ||||| ||||||| ||||||||    
T  24818400 ttcttataagccttccttgaaccatgcagtcccatacatgcacggcctcaggat 24818347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 25434128 - 25434181
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||| |||||| |||||| ||||||||    
T  25434128 ttcttataagccttccttcaaccatgaagtcccataccagcacggcctcaggat 25434181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 27882998 - 27883051
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||||||||  || ||||||| |||||||||||||| ||||||| ||||||||    
T  27882998 ttcttataagcattccttcaacaatgcagtctcatacatgcacggcctcaggat 27883051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 33175032 - 33174979
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||| ||||||| ||||| ||||||||    
T  33175032 ttcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggat 33174979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 146 - 250
Target Start/End: Original strand, 8181230 - 8181333
Alignment:
Q  146 ttttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacc 245  Q
    ||||||| |||| |||||||||   |||| |||||||||||||||||| | ||||||||| ||||  |||| || |||  |||||| |||  ||||||||    
T  8181230 ttttaagcattgtcgactgacctg-caaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacgtttatcggaaaacttcccagtaggtcacc 8181328  T
Q  246 catcc 250  Q
    |||||    
T  8181329 catcc 8181333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 365 - 405
Target Start/End: Complemental strand, 16379007 - 16378967
Alignment:
Q  365 tataagtctttcttcaaccatgcagtctcatacctgcacgg 405  Q
    |||||| ||| |||||||||||||||||||||| |||||||    
T  16379007 tataagacttccttcaaccatgcagtctcatacttgcacgg 16378967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 414
Target Start/End: Original strand, 29259697 - 29259745
Alignment:
Q  366 ataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    ||||| ||| |||||||||||||||| ||||| || |||||||||||||    
T  29259697 ataagccttccttcaaccatgcagtcccatacttgtacggtctcaggat 29259745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 405
Target Start/End: Original strand, 30963792 - 30963836
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacgg 405  Q
    ||||||||||| || ||||||||||||| |||| |||||||||||    
T  30963792 ttcttataagttttccttcaaccatgcattctcttacctgcacgg 30963836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 72; Significance: 1e-32; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 1490 - 1343
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||| ||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  1490 attgtcgactgacgccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 1391  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  1390 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 1343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 361 - 413
Target Start/End: Complemental strand, 1294 - 1242
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 413  Q
    |||||||||| ||| |||||||||||||||| |||||||||| || |||||||    
T  1294 ttcttataagccttccttcaaccatgcagtcccatacctgcatggcctcagga 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 69; Significance: 8e-31; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 157 - 301
Target Start/End: Original strand, 107342 - 107486
Alignment:
Q  157 gccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaat 256  Q
    |||||||||||||||||| ||||||||||||||||||   ||||||||| ||||| |||||||  || ||||||| ||   | ||||||||||| |||||    
T  107342 gccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgggaaacttcccggtacgtcacccatcccaaaat 107441  T
Q  257 tgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    || |||| |||||  ||||||||||||||||||||||||||||||    
T  107442 tgctccaagtcaagcacgcttaactgtggagttcttatggaatga 107486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 361 - 411
Target Start/End: Original strand, 107535 - 107585
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcag 411  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||| |||||    
T  107535 ttcttataagccttccttcaaccatgcagtcccatacctgtacggcctcag 107585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 68; Significance: 3e-30; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 140 - 295
Target Start/End: Original strand, 17460 - 17615
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    ||||||||||||||||||||||||||||| |  || |||||||||||||||||| | ||||||||| ||||| |||||||  ||| |||||||| |  ||    
T  17460 agacgattttaagtattgccgactgaccctatgaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaaactttcgagtag 17559  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatg 295  Q
    ||||||||||| || | |  |||| |||||  ||||||||||||||||||||||||    
T  17560 gtcacccatccaaagagtactccaagtcaagcacgcttaactgtggagttcttatg 17615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 140 - 299
Target Start/End: Original strand, 17997 - 18156
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||| |||||| |||| ||| |||||| |||||||||||||||||||||||| | ||| ||||| ||||| |||| ||  ||| ||||||||||| ||    
T  17997 agacgactttaagcattgtcgattgaccctacaaatcaacacgagtcttttcagcgtgttgtgtcctcactcgcacgtttaccgaaaaactttccaatag 18096  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||||||||| || | |  |||| |||||  ||||||||||||||||||||||||||||    
T  18097 gtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaat 18156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 18206 - 18259
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||||||| ||||||| ||| |||| ||||||| ||||| ||||||||    
T  18206 ttcttataagtcttccttcaactatgtagtcacatacctacacggcctcaggat 18259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 10569 - 10423
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |  ||||||| ||   ||||||||||||| ||    
T  10569 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccatcc-aa 10471  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  10470 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 10423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Complemental strand, 10374 - 10321
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||| |||||||||||| ||||| ||||||| ||||||||    
T  10374 ttcttataagccttccttgaaccatgcagtcccatacatgcacggcctcaggat 10321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 155027 - 154880
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||  ||| |||  |||||||||| ||   ||||||||||| | ||    
T  155027 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactagcacacttaccgagaaacttcccggtaggtcacccattccaa 154928  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  154927 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 154880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 211
Target Start/End: Complemental strand, 154572 - 154515
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 211  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  154572 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactc 154515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 140 - 296
Target Start/End: Complemental strand, 7225 - 7070
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 239  Q
    |||||||||| || |||| ||| ||||||||||   |||||||||||||||||    | ||||||| |||||||| |||||||| |||||||||||||||    
T  7225 agacgattttcagaattgtcgattgaccccacaggccaacacgagtcttttcaccttg-tttgtccccactcacatgcttttcgggaaactttccaaaag 7127  T
Q  240 gtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatgg 296  Q
    ||||||||| | ||||||| |||| |||||  | |||||||||||||||||||||||    
T  7126 gtcacccataccaaaattgctccaagtcaagcatgcttaactgtggagttcttatgg 7070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 162 - 301
Target Start/End: Original strand, 14586 - 14725
Alignment:
Q  162 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttc 261  Q
    ||||||||||||| ||||||||||||||||||   ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||||||| ||    
T  14586 ctgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctc 14685  T
Q  262 catgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    || |||||  ||||||||||||||||||||||||||||||    
T  14686 caagtcaagcacgcttaactgtggagttcttatggaatga 14725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 154 - 299
Target Start/End: Original strand, 2086 - 2231
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||| |||||||||||||||| ||||||||||||||||| || ||||||||| ||||| |||||||  ||  |||||| ||   ||||||||||||| ||    
T  2086 attgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaa 2185  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaat 299  Q
    ||||| |||| |||||  |||||||||| | |||||||||||||||    
T  2186 aattgctccaagtcaagcacgcttaactattgagttcttatggaat 2231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 414
Target Start/End: Original strand, 2282 - 2335
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 414  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||||| || |||||    
T  2282 ttcttataagccttccttcaaccatgtagtcccatacctgcacggccttaggat 2335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 154 - 301
Target Start/End: Complemental strand, 105990 - 105843
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    ||||||||||||||| | ||| |||||||||||||||||| | ||||||||| ||||| |||||||  |  |||||||  |   ||||||| ||||| ||    
T  105990 attgccgactgaccctataaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttctcggtaggtcacacatcccaa 105891  T
Q  254 aattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  105890 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 105843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 159 - 283
Target Start/End: Original strand, 1582 - 1706
Alignment:
Q  159 cgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattg 258  Q
    |||||||||||||||| ||||||||||||||| || | ||||||||| |||||||| ||||  || ||||||| ||   ||||||||||||| |||||||    
T  1582 cgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatcccaaaattg 1681  T
Q  259 ttccatgtcaaatacgcttaactgt 283  Q
     |||| |||||  ||||||||||||    
T  1682 ctccaagtcaagcacgcttaactgt 1706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 51; Significance: 4e-20; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 140 - 301
Target Start/End: Complemental strand, 5304 - 5144
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttcca-aaa 238  Q
    |||||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || |||| ||||||   |    
T  5304 agacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa-tttccaggta 5206  T
Q  239 ggtcacccatcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatga 301  Q
    ||||||||||||  |||||| |||| || ||  |||||||||||||||||||||||| |||||    
T  5205 ggtcacccatcc-caaattgctccaagttaagcacgcttaactgtggagttcttatgaaatga 5144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 147 - 336
Target Start/End: Complemental strand, 4837 - 4650
Alignment:
Q  147 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 246  Q
    |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   |||||||||    
T  4837 tttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcaccc 4738  T
Q  247 atcctaaaattgttccatgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 336  Q
    ||||  |||||| |||| || ||  || ||||||||||||||||||||  ||||| |||        |||||||||||||||||||||||    
T  4737 atcc-caaattgctccaagttaagcacacttaactgtggagttcttataaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 4650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 193
Target Start/End: Complemental strand, 5408 - 5354
Alignment:
Q  139 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcag 193  Q
    ||||||| |||||| |||| ||||| |||| ||||| ||||||||||||||||||    
T  5408 tagacgactttaagcattgtcgacttaccctacaaaccaacacgagtcttttcag 5354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 154 - 255
Target Start/End: Complemental strand, 26338 - 26237
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 253  Q
    |||||||| ||| || |||||||||||||||||||||||| | ||| ||| | | ||| || |||||||||||||||||| | ||| |||| ||||||||    
T  26338 attgccgattgatcctacaaatcaacacgagtcttttcagcgtgttatgttctccctcgcaagcttttcgagaaactttctataagctcactcatcctaa 26239  T
Q  254 aa 255  Q
    ||    
T  26238 aa 26237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 361 - 410
Target Start/End: Complemental strand, 23747 - 23698
Alignment:
Q  361 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  23747 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctca 23698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 193
Target Start/End: Original strand, 62983 - 63022
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcag 193  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  62983 attgccgactgaccccacaaaccaatacgagtcttttcag 63022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 364 - 410
Target Start/End: Original strand, 991 - 1037
Alignment:
Q  364 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 410  Q
    |||||||||||  |||||||||||||||||||| |||||| ||||||    
T  991 ttataagtcttctttcaaccatgcagtctcatatctgcactgtctca 1037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 140 - 182
Target Start/End: Original strand, 45038 - 45080
Alignment:
Q  140 agacgattttaagtattgccgactgaccccacaaatcaacacg 182  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||    
T  45038 agacgactttaattattgccaactgaccccacaaatcaacacg 45080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 154 - 219
Target Start/End: Complemental strand, 2366 - 2301
Alignment:
Q  154 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 219  Q
    |||| ||||||| || ||||| |||||||||||||||||| | ||||| ||| ||||| |||||||    
T  2366 attgtcgactgatcctacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgctt 2301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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