View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11168_low_75 (Length: 235)
Name: NF11168_low_75
Description: NF11168
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11168_low_75 |
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Alignment Details
Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 39669968 - 39670165
Alignment:
| Q |
1 |
gagtcagcgggagcgtaggatgaggaacagcccgagtaacgaggaacacaacaaagaccaaaaccaagtagtggtagcctagtaggagtattattattca |
100 |
Q |
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| T |
39669968 |
gagtcagcgggagcgtaggatgaggaacagcccgagtaacgaggaacacaacaaagaccaaaaccaagtag--------tagtaggagtattattattca |
39670059 |
T |
|
| Q |
101 |
tcataacactatcattcattcataagtatttacaacaacaccaacaactgtacaaaagacacagcatgcagcggcatttactactcttatttgagttgac |
200 |
Q |
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| T |
39670060 |
tcataacactatcattcattcataagtatttacaa------caacaactgtacaaaagacacagcatgcagcggcatttactactcttatttgagttgac |
39670153 |
T |
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