View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1116_low_18 (Length: 251)
Name: NF1116_low_18
Description: NF1116
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1116_low_18 |
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Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 35671880 - 35671640
Alignment:
| Q |
1 |
atcatggtaccatttcagtgttgtcaccagctgccaccattctggagaaaaatcctcgacatagcgaaatgcagctggaatgtaaagtggtgcattaggg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35671880 |
atcatggtaccatttcagtgttgtcaccagctgccaccattccggagaaaaatcctcgacatagcgaaatgcagctggaatgtaaagtggtgcattaggg |
35671781 |
T |
|
| Q |
101 |
tttagtgttgatcttcctcctgaaactaatgccatcttgaatcaccttcactcttatcactttttccttaatctacaccattaatcaacaattaacaatg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35671780 |
tttagtgttgatcttcctcctgaaactaatgccatcttgaatcaccttcactcttatcactttttccttaatctacaccattaatcaacaattaacaatg |
35671681 |
T |
|
| Q |
201 |
ttaatacaactcaaaatttcaatcataatcattaagtataa |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
35671680 |
ttaatacaactcaaaatttcaatcataatcattaagtataa |
35671640 |
T |
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