View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11170_low_14 (Length: 239)
Name: NF11170_low_14
Description: NF11170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11170_low_14 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 16 - 239
Target Start/End: Complemental strand, 1445493 - 1445270
Alignment:
| Q |
16 |
aagaatctggaaaagaacgtctgaaacacgacccttaaagtcgagtttcaacgaaccagaagaccggaagcacaaaccaccgtctagaaaaactgaaaat |
115 |
Q |
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| T |
1445493 |
aagaatctggaaaagaacctctgaaacacgacccttaaagtcgagtttcaacgaaccagaagaccggaagcacaaaccaccgtctagaaaaactgaaaat |
1445394 |
T |
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| Q |
116 |
agaacaaaccaacacaagccttgtagttgaatggcgacaaagacaagaacgctgacagaaaactattgaggttgtgcaggtaagactggctgccagaaga |
215 |
Q |
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| T |
1445393 |
agaacaaaccaacacaagccttgtagttgaatggcgacaaagacaagaacgctgacagaaaactattgaggttgtgcaggtaagactggctgccagaaga |
1445294 |
T |
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| Q |
216 |
gaaaaggtacaaaacaaagtcccc |
239 |
Q |
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|||||||||||||||||||||||| |
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| T |
1445293 |
gaaaaggtacaaaacaaagtcccc |
1445270 |
T |
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