View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF11170_low_4 (Length: 574)
Name: NF11170_low_4
Description: NF11170
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11170_low_4 |
 |  |
|
| [»] scaffold2113 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr4 (Bit Score: 486; Significance: 0; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 486; E-Value: 0
Query Start/End: Original strand, 17 - 556
Target Start/End: Original strand, 33758952 - 33759491
Alignment:
| Q |
17 |
gaccagagttagaacttcagacaccccgttattcaccnnnnnnntatgaatttctagccactagaccgcttnnnnnnngttcaactttcttatagattgg |
116 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33758952 |
gaccagagttagaacttcagacaccccgttattcaccaaaaaaatatgaatttctagccactagaccgcttaaaaaaagttcaactttcttatagattgg |
33759051 |
T |
 |
| Q |
117 |
tttgggtctcttaacatgtaaatttggacaacaatgaggtgtagattaattcttcaagcatcattttgtatgttgtgttgttgaatcaaaaccctgtgtt |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
33759052 |
tttgggtctcttaacatgtaaatttggacaacaatgaggtgtagattaattcttcaagcatcattttgtatgttgtgttgttgaatcaaaaccctgcgtt |
33759151 |
T |
 |
| Q |
217 |
ggatctcttctctatctgtttgatgtttattcatttaatgactacgtgggtttgtctgtgaaatctatttttagttatagttggtctaaaaaattcatca |
316 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33759152 |
ggatctcttctctatttgtttggtgtttattcatttaatgactacgtgggtttgtctgtgaaatctatttttagttatagttggtctaaaaaattcatca |
33759251 |
T |
 |
| Q |
317 |
cacaatttctttatcgtgtgtgaccagtgttcataccaatacttgtatccgtcttcacatttattttattgcgttaatgcatgtaacttatgaacaatgt |
416 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33759252 |
cacaatttctttatcgtgtgtgaccagtgttcataccaatacttgtatccgtcttcacatttattttattgcgttaatgcatgtaacttatgaacaatgt |
33759351 |
T |
 |
| Q |
417 |
atcttttctaatgaaattttggttttaattgataagtataaatgttagtgactttctagttgtaacaaaccataagtcaaattttgaactaaatacatta |
516 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33759352 |
atcttttctaatgaaattttggttttaattgataagtataaatgttagtgactttctagttgtaacaaaccataagtcaaattttgaactaaatacatta |
33759451 |
T |
 |
| Q |
517 |
atttttgttgaccaattttacttatattttgggacgaaat |
556 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33759452 |
atttttgttgaccaattttacttatattttgggacgaaat |
33759491 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 30848643 - 30848684
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
30848643 |
caaattttgaacaaaatacattaatttttgttgaccaatttt |
30848684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 497 - 535
Target Start/End: Original strand, 18508871 - 18508909
Alignment:
| Q |
497 |
attttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
18508871 |
attttgaactaaatacattaacttttgttgaccaatttt |
18508909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 2734225 - 2734179
Alignment:
| Q |
507 |
aaatacattaatttttgttgaccaatttt-acttatattttgggacg |
552 |
Q |
| |
|
||||||||||| |||||||||| |||||| ||||||||||||||||| |
|
|
| T |
2734225 |
aaatacattaacttttgttgactaatttttacttatattttgggacg |
2734179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 552
Target Start/End: Complemental strand, 12276878 - 12276820
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaat-tttacttatattttgggacg |
552 |
Q |
| |
|
|||||||||| ||||||||||| ||||| |||||||| |||||||||||||| ||||| |
|
|
| T |
12276878 |
aaattttgaatcaaatacattaacttttgctgaccaatctttacttatattttaggacg |
12276820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 503 - 552
Target Start/End: Original strand, 23151590 - 23151640
Alignment:
| Q |
503 |
aactaaatacattaatttttgttgaccaattttac-ttatattttgggacg |
552 |
Q |
| |
|
||||||||||||||||||||||||| ||||||| | |||||||||| |||| |
|
|
| T |
23151590 |
aactaaatacattaatttttgttgatcaatttttctttatattttgagacg |
23151640 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 24980676 - 24980717
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||| || |||||||||||||||||||||| |||||| |
|
|
| T |
24980676 |
caaattttgtacaaaatacattaatttttgttgacaaatttt |
24980717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 551
Target Start/End: Complemental strand, 40391302 - 40391257
Alignment:
| Q |
507 |
aaatacattaatttttgttga-ccaattttacttatattttgggac |
551 |
Q |
| |
|
||||||||||||||||||||| | | |||||||||||||||||||| |
|
|
| T |
40391302 |
aaatacattaatttttgttgatcgatttttacttatattttgggac |
40391257 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 54235273 - 54235314
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
54235273 |
caaattttgaaccaaatacattaacttttgttgagcaatttt |
54235314 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 55827292 - 55827353
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacgaa |
554 |
Q |
| |
|
|||| ||| ||| ||||| ||||| ||||||||||||| |||| |||||||||||||||||| |
|
|
| T |
55827292 |
caaaattttaaccaaatatattaacttttgttgaccaatttttgcttatattttgggacgaa |
55827353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 535
Target Start/End: Complemental strand, 3249743 - 3249703
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||||| ||||||||||| |||||| |||||||||| |
|
|
| T |
3249743 |
aaattttgaaccaaatacattaacttttgtcgaccaatttt |
3249703 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 8)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 546
Target Start/End: Original strand, 23971236 - 23971288
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaattttacttatatttt |
546 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||| |||||||||| |
|
|
| T |
23971236 |
caaattttgaactaaatatatttatttttgttgaccaatttttcttatatttt |
23971288 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 551
Target Start/End: Complemental strand, 6803366 - 6803308
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgacc-aattttacttatattttgggac |
551 |
Q |
| |
|
|||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||| |
|
|
| T |
6803366 |
caaattttaaactaaatacattaacttttgttgaccaaattttgcttatattttgggac |
6803308 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 47967972 - 47967913
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgacc-aattttacttatattttgggacg |
552 |
Q |
| |
|
|||||||| |||||||||||| |||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
47967972 |
caaattttaaactaaatacataaatttttgttgaccgaattttgtttatattttgggacg |
47967913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 18732042 - 18732099
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaattttacttatattttgggacg |
552 |
Q |
| |
|
||||||||||| ||||||||||| |||| |||||||||||| |||| ||||| ||||| |
|
|
| T |
18732042 |
aaattttgaaccaaatacattaacttttattgaccaatttttcttacattttaggacg |
18732099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 551
Target Start/End: Complemental strand, 5026199 - 5026141
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttta-cttatattttgggac |
551 |
Q |
| |
|
||||||||| |||||||| ||||| ||||||| ||||||||| ||||||||||||||| |
|
|
| T |
5026199 |
caaattttggactaaatatattaacttttgttaaccaatttttgcttatattttgggac |
5026141 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 16866452 - 16866493
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
16866452 |
caaatttttaaccaaatacattaacttttgttgaccaatttt |
16866493 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 546
Target Start/End: Complemental strand, 30794500 - 30794447
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgacc-aattttacttatatttt |
546 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
30794500 |
caaattttgaatcaaatatattaaattttgttgaccaaattttacttatatttt |
30794447 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 44816526 - 44816485
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||| |||||||| |
|
|
| T |
44816526 |
caaattttgaaccaaatacattaacttttgttggccaatttt |
44816485 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 495 - 550
Target Start/End: Original strand, 16180487 - 16180543
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgacc-aattttacttatattttggga |
550 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
16180487 |
aaattttgaaccaaatacattaacttttgttgaccaaattttacttatattttggga |
16180543 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 17437177 - 17437236
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| |
|
|
| T |
17437177 |
caaattttgaactaaatacattaatttttgttgacaaatttttgtttatattttgggacg |
17437236 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 552
Target Start/End: Complemental strand, 2884314 - 2884256
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| || ||||||||||||||| ||||| |
|
|
| T |
2884314 |
aaattttgaaccaaatacattaatttttgttgacaaatttttacttatattttaggacg |
2884256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 556
Target Start/End: Original strand, 44726834 - 44726896
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacgaaat |
556 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| ||| |||| |||||||||| ||||||||| |
|
|
| T |
44726834 |
aaattttaaactaaatacattaatttttgttgatcaattttttcttatatttttggacgaaat |
44726896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 494 - 550
Target Start/End: Complemental strand, 10459325 - 10459268
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttggga |
550 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||||| |
|
|
| T |
10459325 |
caaattttgaaccaaatacattaacttttgttgaccaatttttgcttatattttggga |
10459268 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 31469130 - 31469071
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
|||||||| ||| ||||||||||| ||||||||||||| |||| |||||||||||||||| |
|
|
| T |
31469130 |
caaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttgggacg |
31469071 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 33829448 - 33829389
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
||||||||| || ||||| ||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
33829448 |
caaattttgtaccaaatatattaatttttgttgaccaatttttgtttatattttgggacg |
33829389 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 546
Target Start/End: Original strand, 5713276 - 5713329
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgacc-aattttacttatatttt |
546 |
Q |
| |
|
||||||||||| ||||||| |||||||| ||||||| ||||||| ||||||||| |
|
|
| T |
5713276 |
caaattttgaattaaatacgttaattttggttgaccaaattttatttatatttt |
5713329 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 11386368 - 11386327
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||||| |||||| ||||||||||||||| ||||||| |
|
|
| T |
11386368 |
caaattttgaattaaatatattaatttttgttgatcaatttt |
11386327 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 30517918 - 30517959
Alignment:
| Q |
507 |
aaatacattaatttttgttgaccaa-ttttacttatattttg |
547 |
Q |
| |
|
|||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
30517918 |
aaatacattaatttttgttgacaaatttttacttatattttg |
30517959 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 41912128 - 41912169
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||| ||||||| |
|
|
| T |
41912128 |
caaattttgaaccagatacattaatttttgttgaacaatttt |
41912169 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 7)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 494 - 548
Target Start/End: Original strand, 3694038 - 3694093
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaattt-tacttatattttgg |
548 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3694038 |
caaattttgaatcaaatacattaatttttgttgaccaatttctacttatattttgg |
3694093 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 507 - 549
Target Start/End: Original strand, 35310316 - 35310359
Alignment:
| Q |
507 |
aaatacattaatttttgttgaccaa-ttttacttatattttggg |
549 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
35310316 |
aaatacattaatttttgttgaccaatttttacttatattttggg |
35310359 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 546
Target Start/End: Original strand, 19758322 - 19758375
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatatttt |
546 |
Q |
| |
|
|||||| | ||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
19758322 |
caaattataaactaaatacattaacttttgttgaccaatttttacttatatttt |
19758375 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 47543658 - 47543617
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
47543658 |
caaattttgaaccaaattcattaatttttgttgaccaatttt |
47543617 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 3739865 - 3739924
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
|||||||| ||| ||||||||||| ||||||||||||| |||| |||||||||| ||||| |
|
|
| T |
3739865 |
caaatttttaaccaaatacattaacttttgttgaccaatttttgcttatattttaggacg |
3739924 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 30693394 - 30693335
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||| ||||| ||||||||| ||||| |
|
|
| T |
30693394 |
caaattttgaatcaaatacattaatttttgttgatcaatttttatttatattttcggacg |
30693335 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 530
Target Start/End: Original strand, 10498377 - 10498413
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgacca |
530 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
10498377 |
caaattttaaactaaatatattaatttttgttgacca |
10498413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 494 - 547
Target Start/End: Original strand, 968333 - 968387
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgac-caattttacttatattttg |
547 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| || |||||||||||||||| |
|
|
| T |
968333 |
caaattttgaactaaatatattaatttttgttgactcatttttacttatattttg |
968387 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 552
Target Start/End: Complemental strand, 34252775 - 34252717
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||| |||| |||| ||||||||||| |
|
|
| T |
34252775 |
aaattttgaaccaaatacattaacttttgttgaccaatttttgcttacattttgggacg |
34252717 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 495 - 546
Target Start/End: Original strand, 19644450 - 19644502
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaatt-ttacttatatttt |
546 |
Q |
| |
|
||||||||||| |||||| |||||||||||||| ||||| ||||||||||||| |
|
|
| T |
19644450 |
aaattttgaaccaaatacgttaatttttgttgatcaattcttacttatatttt |
19644502 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 495 - 527
Target Start/End: Complemental strand, 23344939 - 23344907
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttga |
527 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
23344939 |
aaattttgaactaaatacattaatttttgttga |
23344907 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 495 - 554
Target Start/End: Complemental strand, 20219554 - 20219495
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaattttacttatattttgggacgaa |
554 |
Q |
| |
|
|||||||||| ||||| ||||| ||||||||| |||||||||||| ||||| ||||||| |
|
|
| T |
20219554 |
aaattttgaatcaaatatattaacttttgttgatcaattttacttacattttaggacgaa |
20219495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 552
Target Start/End: Original strand, 9956550 - 9956608
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
|||||||||| ||||||||||| ||||||| ||||| ||||||||| ||||||||||| |
|
|
| T |
9956550 |
aaattttgaatcaaatacattaacttttgttaaccaatttttacttacattttgggacg |
9956608 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 39030622 - 39030581
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||| ||| ||||||||||| ||||||||||||||||| |
|
|
| T |
39030622 |
caaatttttaaccaaatacattaacttttgttgaccaatttt |
39030581 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 547
Target Start/End: Original strand, 42324944 - 42324985
Alignment:
| Q |
507 |
aaatacattaatttttgttgaccaa-ttttacttatattttg |
547 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
42324944 |
aaatacattaacttttgttgaccaatttttacttatattttg |
42324985 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 534
Target Start/End: Original strand, 14611071 - 14611107
Alignment:
| Q |
498 |
ttttgaactaaatacattaatttttgttgaccaattt |
534 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
14611071 |
ttttgaactaaatacataaattttagttgaccaattt |
14611107 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 535
Target Start/End: Complemental strand, 16500615 - 16500575
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||||| || |||||||||||||||||| ||||||| |
|
|
| T |
16500615 |
aaattttgaaccaattacattaatttttgttgaacaatttt |
16500575 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2113 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold2113
Description:
Target: scaffold2113; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 494 - 550
Target Start/End: Original strand, 627 - 684
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt-acttatattttggga |
550 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||| |||||| ||||||||||||||| |
|
|
| T |
627 |
caaattttgaactaaatacaataacttttgttgactaattttcacttatattttggga |
684 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 554
Target Start/End: Original strand, 31522659 - 31522719
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaattttacttatattttgggacgaa |
554 |
Q |
| |
|
||||||||||| |||| |||||| ||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
31522659 |
caaattttgaatcaaatgcattaacttttgttgaccaattttgcttacattttgggacgaa |
31522719 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Original strand, 8437825 - 8437884
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgac-caattttacttatattttgggacg |
552 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
8437825 |
caaattttgaatcaaatacattaatttttgttgactaaattttacttatattttgagacg |
8437884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 9829950 - 9829891
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
|||||||| ||| |||||||||||||||||||||| || |||||||||||||| |||||| |
|
|
| T |
9829950 |
caaattttaaacaaaatacattaatttttgttgactaatttttacttatatttagggacg |
9829891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 552
Target Start/End: Complemental strand, 1986262 - 1986204
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
1986262 |
aaattttaaactaaatgcattaatttttattgaccaacttttacttatattttaggacg |
1986204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 498 - 535
Target Start/End: Complemental strand, 2282453 - 2282416
Alignment:
| Q |
498 |
ttttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
2282453 |
ttttgaactaaatacattaacttttgttgaccaatttt |
2282416 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 31323873 - 31323832
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||||||||||| |
|
|
| T |
31323873 |
caaattttgaacaaaatacattaacttttgttgaccaatttt |
31323832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 28596131 - 28596080
Alignment:
| Q |
497 |
attttgaactaaatacattaatttttgttgaccaa-ttttacttatattttg |
547 |
Q |
| |
|
||||||||| ||||| ||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
28596131 |
attttgaaccaaatatattaatttttgttgaccaatttttacttacattttg |
28596080 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 552
Target Start/End: Complemental strand, 35003818 - 35003759
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggacg |
552 |
Q |
| |
|
||||||||||| |||||||||||||||| || ||||| ||||||||||||||| ||||| |
|
|
| T |
35003818 |
caaattttgaatcaaatacattaatttttattaaccaatttttacttatattttaggacg |
35003759 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 552
Target Start/End: Original strand, 7343294 - 7343351
Alignment:
| Q |
496 |
aattttgaactaaatacattaatttttgttgaccaatttt-acttatattttgggacg |
552 |
Q |
| |
|
||||||||| |||||| ||||| ||||||||| ||||||| ||||||||||| ||||| |
|
|
| T |
7343294 |
aattttgaaataaatatattaacttttgttgatcaatttttacttatattttaggacg |
7343351 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 551
Target Start/End: Complemental strand, 14446754 - 14446697
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggac |
551 |
Q |
| |
|
||||||||||| | ||||||||| ||||||||||||| |||| |||| |||||||||| |
|
|
| T |
14446754 |
aaattttgaacaacatacattaacttttgttgaccaacttttgcttacattttgggac |
14446697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 495 - 547
Target Start/End: Original strand, 24640142 - 24640195
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttg |
547 |
Q |
| |
|
||||||||||||||||| ||||| ||||||||| ||| ||||||| |||||||| |
|
|
| T |
24640142 |
aaattttgaactaaataaattaacttttgttgatcaacttttactaatattttg |
24640195 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 550
Target Start/End: Original strand, 28004674 - 28004731
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt-acttatattttggga |
550 |
Q |
| |
|
|||||||||| | ||||||||||| |||||||||| |||||| |||||||||||||| |
|
|
| T |
28004674 |
caaattttgagccaaatacattaacttttgttgactaattttcccttatattttggga |
28004731 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 34; Significance: 0.0000000008; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 15114676 - 15114635
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
15114676 |
caaattttgaatcaaatacattaatttttgttgaccaatttt |
15114635 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 494 - 542
Target Start/End: Original strand, 11196268 - 11196316
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaattttacttata |
542 |
Q |
| |
|
||||||||||| |||||||||||||||||||||| || |||| |||||| |
|
|
| T |
11196268 |
caaattttgaattaaatacattaatttttgttgatcagttttgcttata |
11196316 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 495 - 546
Target Start/End: Original strand, 44080727 - 44080779
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaa-ttttacttatatttt |
546 |
Q |
| |
|
||||||||| |||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
44080727 |
aaattttgagttaaatacattaatttttgttgatcaatttttacttatatttt |
44080779 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 551
Target Start/End: Original strand, 33557826 - 33557884
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgggac |
551 |
Q |
| |
|
|||||||||||||||||||||||| |||| |||| ||| |||||||||| |||| |||| |
|
|
| T |
33557826 |
caaattttgaactaaatacattaacttttattgatcaatttttacttatgttttaggac |
33557884 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 13210023 - 13209982
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||| ||||||| |
|
|
| T |
13210023 |
caaattttgaaccaaatacattaacttttgttgatcaatttt |
13209982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.0000000008; HSPs: 9)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 3956217 - 3956176
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
3956217 |
caaattttaaactaaatacatttatttttgttgaccaatttt |
3956176 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 26104277 - 26104236
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
26104277 |
caaattttgaactaaatacattagtttttgttaaccaatttt |
26104236 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 494 - 546
Target Start/End: Complemental strand, 31280214 - 31280161
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatatttt |
546 |
Q |
| |
|
|||||||||||| ||||||||||| ||||||||| ||| ||||||||||||||| |
|
|
| T |
31280214 |
caaattttgaaccaaatacattaaattttgttgatcaatttttacttatatttt |
31280161 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 548
Target Start/End: Complemental strand, 47783137 - 47783082
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaa-ttttacttatattttgg |
548 |
Q |
| |
|
|||||||||||| ||||||||||| |||| |||||||| ||||||||| ||||||| |
|
|
| T |
47783137 |
caaattttgaaccaaatacattaactttttttgaccaatttttacttacattttgg |
47783082 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 32221521 - 32221562
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||| ||||||||||| |||||||||| |||||| |
|
|
| T |
32221521 |
caaattttgaaccaaatacattaacttttgttgactaatttt |
32221562 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 40955837 - 40955796
Alignment:
| Q |
494 |
caaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
|||||||||||||||||||| |||||||| |||| ||||||| |
|
|
| T |
40955837 |
caaattttgaactaaatacaataatttttattgatcaatttt |
40955796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 535
Target Start/End: Original strand, 26914501 - 26914541
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||||| | ||||||||||||||||||| ||||||| |
|
|
| T |
26914501 |
aaattttgaaccacatacattaatttttgttgatcaatttt |
26914541 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 495 - 535
Target Start/End: Complemental strand, 40905860 - 40905820
Alignment:
| Q |
495 |
aaattttgaactaaatacattaatttttgttgaccaatttt |
535 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||||||||||| |
|
|
| T |
40905860 |
aaattttgaaccaaataaattaacttttgttgaccaatttt |
40905820 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 46829106 - 46829154
Alignment:
| Q |
507 |
aaatacattaatttttgttgaccaa-ttttacttatattttgggacgaa |
554 |
Q |
| |
|
||||||||||| ||||||||||||| |||| |||||||||| ||||||| |
|
|
| T |
46829106 |
aaatacattaacttttgttgaccaatttttgcttatattttaggacgaa |
46829154 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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