View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11171A_low_128 (Length: 267)
Name: NF11171A_low_128
Description: NF11171A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11171A_low_128 |
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Alignment Details
Target: chr7 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 18 - 255
Target Start/End: Complemental strand, 43669759 - 43669522
Alignment:
| Q |
18 |
aaatatgatagtactaaatcatcatgcaatgcttaaccataaatatgcaatcattataatgtgnnnnnnnnnnnnngcaagacaacttgggatctgaatg |
117 |
Q |
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| T |
43669759 |
aaatatgatagtactaaatcatcatgcaatgcttaaccataaatatgcaatcattataatgtgttttttcatttttgcaagacaacttgggatctgaatg |
43669660 |
T |
|
| Q |
118 |
aattggatgcaaaacatggtcggtacatttaagggtatccgattaagatcaatccatttaaatttcttaatggaacagtcacgtatacatcaatgagtaa |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
43669659 |
aattggatgcaaaacatggtcggtacatttaagggtatccgattaagatcaatccatttaaatttcttaatggaacagtcacatatacatcaatgagtaa |
43669560 |
T |
|
| Q |
218 |
accaccaatttgaaccaagtctttgtaagccactttca |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
43669559 |
accaccaatttgaaccaagtctttgtaagccactttca |
43669522 |
T |
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