View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11171A_low_141 (Length: 259)
Name: NF11171A_low_141
Description: NF11171A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11171A_low_141 |
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Alignment Details
Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 276275 - 276355
Alignment:
| Q |
10 |
atatgaatgcatggttcacattaccactagattgtatggtagtaaggaattgatatgtaatggttttcaattttttcgtgg |
90 |
Q |
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| T |
276275 |
atatgaatgcatggttcacattaccactagattgtatggtagtaaggaattgatatgtaatggttttcaatttttttgtgg |
276355 |
T |
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