View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11171A_low_150 (Length: 254)
Name: NF11171A_low_150
Description: NF11171A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11171A_low_150 |
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Alignment Details
Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 5 - 242
Target Start/End: Complemental strand, 41404394 - 41404157
Alignment:
| Q |
5 |
cacatatttcatatggtttctgttcaatcgacttagaaggaagtcaaggaacgcaattgcttgcgagtagagcacatgccaaaaatgactcaaattgact |
104 |
Q |
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| T |
41404394 |
cacatatttcatatggtttctgttcaatcgacttagaaggaagtcaaggaacacaattgcttgcgagtagagcacatgccaaaaatgactctaattgact |
41404295 |
T |
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| Q |
105 |
cgtaatctatcaaacatgtcttacagggtctgattcctactttcatacacatcatttcattgcagccacacgattgaaggtcttttgactgccaaaacca |
204 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |
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| T |
41404294 |
cgtaatctatcaaacatgtcttatagggtctgattcctactttcatacacatcatttcattgcagccacacgattgaaggtcttttgactgcgaatacca |
41404195 |
T |
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| Q |
205 |
gaatctactatttatagcttcaacgtaaatgtgatatt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
41404194 |
gaatctactatttatagcttcaacgtaaatgtgatatt |
41404157 |
T |
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