View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11171A_low_198 (Length: 238)
Name: NF11171A_low_198
Description: NF11171A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11171A_low_198 |
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Alignment Details
Target: chr8 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8683499 - 8683394
Alignment:
| Q |
1 |
gtaagcacataatggaatacgattcagaaagcaatgaatcaagaatcctttgattcctagctaaccaacgtgatctgaagtcactttctctgagtccttg |
100 |
Q |
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| T |
8683499 |
gtaagcacataatggaagacgattcagaaagcaatgaatcaagaatcctttgattcctagctaaccaacgtgatctgaagtcactttctctgagtccttg |
8683400 |
T |
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| Q |
101 |
attctg |
106 |
Q |
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|||||| |
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| T |
8683399 |
attctg |
8683394 |
T |
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