View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11171A_low_278 (Length: 210)
Name: NF11171A_low_278
Description: NF11171A
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11171A_low_278 |
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Alignment Details
Target: chr1 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 79 - 137
Target Start/End: Complemental strand, 43285481 - 43285423
Alignment:
| Q |
79 |
catgccttggtgtcagatatacccacgtgaggcctcactgccacccccatgtcaaagac |
137 |
Q |
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| T |
43285481 |
catgccttggtgtcagatatacccacgtgaggcctcactgccacccccatgtcaaagac |
43285423 |
T |
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