View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11171_low_11 (Length: 385)

Name: NF11171_low_11
Description: NF11171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11171_low_11
NF11171_low_11
[»] chr3 (55 HSPs)
chr3 (102-378)||(34119630-34119906)
chr3 (183-373)||(4557224-4557414)
chr3 (182-372)||(4015962-4016152)
chr3 (183-342)||(49580074-49580233)
chr3 (182-342)||(7469696-7469856)
chr3 (201-341)||(54317155-54317295)
chr3 (182-373)||(29284315-29284506)
chr3 (182-373)||(39655191-39655382)
chr3 (182-361)||(39728662-39728841)
chr3 (215-342)||(52198165-52198292)
chr3 (213-342)||(53631914-53632043)
chr3 (182-342)||(22535759-22535919)
chr3 (182-342)||(34025964-34026124)
chr3 (182-342)||(52572619-52572779)
chr3 (182-373)||(42758353-42758544)
chr3 (225-342)||(23580837-23580954)
chr3 (213-342)||(48390766-48390895)
chr3 (225-373)||(44252726-44252874)
chr3 (225-373)||(44953396-44953544)
chr3 (215-341)||(19111745-19111871)
chr3 (225-342)||(23154026-23154142)
chr3 (202-343)||(43582587-43582727)
chr3 (225-342)||(44639284-44639401)
chr3 (182-373)||(23546866-23547051)
chr3 (214-342)||(29842318-29842445)
chr3 (202-338)||(48305579-48305715)
chr3 (225-373)||(830988-831129)
chr3 (225-342)||(34154424-34154541)
chr3 (225-321)||(42243418-42243514)
chr3 (245-361)||(44172617-44172733)
chr3 (245-361)||(44179317-44179433)
chr3 (211-342)||(3385803-3385934)
chr3 (18-85)||(34121584-34121651)
chr3 (225-342)||(44106755-44106870)
chr3 (227-342)||(30616244-30616359)
chr3 (212-354)||(30904766-30904905)
chr3 (202-299)||(6738343-6738440)
chr3 (225-342)||(10043243-10043360)
chr3 (182-265)||(31126749-31126832)
chr3 (295-372)||(31126826-31126903)
chr3 (225-301)||(23910213-23910289)
chr3 (208-313)||(3414481-3414586)
chr3 (233-342)||(4553200-4553309)
chr3 (267-378)||(49025655-49025765)
chr3 (211-277)||(27252639-27252705)
chr3 (246-312)||(35687473-35687539)
chr3 (214-299)||(20087050-20087135)
chr3 (182-263)||(29858493-29858574)
chr3 (226-342)||(1772361-1772477)
chr3 (214-286)||(40890406-40890478)
chr3 (183-258)||(10371192-10371267)
chr3 (246-299)||(2490358-2490411)
chr3 (215-342)||(17146105-17146228)
chr3 (212-276)||(34593214-34593279)
chr3 (182-258)||(49025762-49025838)
[»] chr4 (68 HSPs)
chr4 (182-373)||(26564816-26565007)
chr4 (182-375)||(7608953-7609146)
chr4 (182-342)||(11028089-11028249)
chr4 (184-361)||(47550274-47550451)
chr4 (182-361)||(55826542-55826721)
chr4 (215-336)||(37107433-37107553)
chr4 (182-361)||(6382191-6382370)
chr4 (182-361)||(44317532-44317711)
chr4 (202-356)||(15987201-15987355)
chr4 (182-373)||(5902539-5902724)
chr4 (201-373)||(21423846-21424018)
chr4 (182-373)||(11122788-11122979)
chr4 (183-342)||(31752472-31752631)
chr4 (182-361)||(31918477-31918656)
chr4 (182-373)||(43893213-43893403)
chr4 (182-368)||(6481954-6482140)
chr4 (260-373)||(1724307-1724420)
chr4 (211-338)||(19883004-19883131)
chr4 (183-342)||(21956734-21956893)
chr4 (182-299)||(37349171-37349288)
chr4 (201-333)||(39375303-39375435)
chr4 (226-342)||(3737792-3737908)
chr4 (202-342)||(42299806-42299944)
chr4 (183-342)||(4741137-4741295)
chr4 (226-361)||(10302081-10302216)
chr4 (227-313)||(43309528-43309614)
chr4 (212-342)||(36919139-36919269)
chr4 (183-332)||(8843725-8843874)
chr4 (183-332)||(8856689-8856838)
chr4 (225-361)||(32585486-32585616)
chr4 (225-342)||(48459497-48459614)
chr4 (226-342)||(1866512-1866628)
chr4 (274-342)||(47239396-47239464)
chr4 (226-340)||(31415894-31416008)
chr4 (264-373)||(12825462-12825571)
chr4 (233-342)||(25941154-25941263)
chr4 (241-342)||(47103754-47103855)
chr4 (182-258)||(53906257-53906333)
chr4 (182-325)||(7334116-7334258)
chr4 (208-302)||(1724215-1724308)
chr4 (202-299)||(12505479-12505577)
chr4 (215-368)||(19534445-19534592)
chr4 (267-368)||(9230272-9230373)
chr4 (246-342)||(14605908-14606004)
chr4 (246-337)||(9929150-9929241)
chr4 (267-342)||(29527828-29527903)
chr4 (226-329)||(41914959-41915062)
chr4 (225-368)||(7985087-7985226)
chr4 (225-307)||(30673012-30673094)
chr4 (273-331)||(32596194-32596252)
chr4 (252-329)||(33615318-33615395)
chr4 (225-342)||(39046968-39047085)
chr4 (274-342)||(21544595-21544663)
chr4 (225-299)||(12075594-12075667)
chr4 (224-326)||(25265126-25265227)
chr4 (225-327)||(39086188-39086290)
chr4 (264-345)||(43351376-43351457)
chr4 (226-342)||(18423606-18423722)
chr4 (183-311)||(19548858-19548985)
chr4 (226-342)||(45065265-45065381)
chr4 (304-344)||(53906346-53906386)
chr4 (226-345)||(29035495-29035614)
chr4 (226-345)||(29047628-29047747)
chr4 (250-368)||(42907876-42907994)
chr4 (315-368)||(37349113-37349166)
chr4 (274-342)||(30266341-30266409)
chr4 (274-342)||(30285779-30285847)
chr4 (246-342)||(50684483-50684579)
[»] chr1 (56 HSPs)
chr1 (182-342)||(19572430-19572590)
chr1 (182-371)||(23490689-23490878)
chr1 (182-342)||(24236679-24236839)
chr1 (183-373)||(12494990-12495180)
chr1 (182-356)||(44615393-44615567)
chr1 (182-356)||(44793002-44793176)
chr1 (182-342)||(5181050-5181210)
chr1 (182-373)||(9982808-9982999)
chr1 (201-373)||(49250710-49250882)
chr1 (182-361)||(36187138-36187317)
chr1 (183-329)||(24710871-24711017)
chr1 (201-375)||(51421836-51422010)
chr1 (225-342)||(10778528-10778645)
chr1 (183-342)||(16408953-16409111)
chr1 (183-361)||(29936408-29936592)
chr1 (183-361)||(34611065-34611243)
chr1 (182-342)||(42707755-42707914)
chr1 (211-338)||(18354027-18354154)
chr1 (211-342)||(34673229-34673360)
chr1 (212-339)||(35936777-35936904)
chr1 (182-342)||(17134958-17135118)
chr1 (225-368)||(29871246-29871389)
chr1 (201-345)||(42439607-42439751)
chr1 (227-342)||(34085246-34085361)
chr1 (202-329)||(39616316-39616443)
chr1 (227-329)||(33293494-33293596)
chr1 (260-361)||(28297926-28298027)
chr1 (225-321)||(13798270-13798366)
chr1 (214-342)||(40087414-40087541)
chr1 (182-342)||(45866104-45866263)
chr1 (183-342)||(3627916-3628063)
chr1 (264-342)||(48125683-48125761)
chr1 (244-341)||(17091939-17092036)
chr1 (212-368)||(41476900-41477056)
chr1 (226-339)||(19003628-19003741)
chr1 (182-311)||(23968621-23968750)
chr1 (246-342)||(16237286-16237382)
chr1 (246-342)||(23058477-23058573)
chr1 (246-342)||(35069871-35069967)
chr1 (315-373)||(49741058-49741116)
chr1 (182-291)||(13390459-13390567)
chr1 (267-373)||(16433170-16433273)
chr1 (245-332)||(36617381-36617469)
chr1 (282-342)||(50426679-50426739)
chr1 (182-265)||(20774654-20774737)
chr1 (270-342)||(34060031-34060103)
chr1 (182-265)||(34059066-34059149)
chr1 (264-343)||(38686672-38686751)
chr1 (213-361)||(16903515-16903663)
chr1 (225-325)||(27867231-27867331)
chr1 (307-342)||(23966884-23966919)
chr1 (267-342)||(39219269-39219344)
chr1 (233-300)||(46740321-46740388)
chr1 (225-307)||(13692675-13692757)
chr1 (201-250)||(28298049-28298098)
chr1 (228-299)||(2514811-2514883)
[»] chr7 (66 HSPs)
chr7 (183-361)||(30650627-30650805)
chr7 (182-373)||(21702643-21702834)
chr7 (182-361)||(35074466-35074645)
chr7 (211-373)||(18125175-18125337)
chr7 (182-342)||(10072481-10072641)
chr7 (214-373)||(5377069-5377228)
chr7 (182-361)||(45885683-45885862)
chr7 (182-368)||(18825784-18825976)
chr7 (201-361)||(16866165-16866325)
chr7 (182-361)||(7780004-7780183)
chr7 (182-342)||(17885480-17885640)
chr7 (225-368)||(12980366-12980509)
chr7 (212-342)||(45380122-45380251)
chr7 (182-373)||(17851838-17852027)
chr7 (202-338)||(39455953-39456089)
chr7 (183-368)||(2630493-2630677)
chr7 (182-338)||(16079032-16079188)
chr7 (201-373)||(27850269-27850435)
chr7 (182-342)||(41103671-41103825)
chr7 (225-342)||(43507460-43507577)
chr7 (202-342)||(44734297-44734435)
chr7 (182-342)||(3226864-3227024)
chr7 (202-342)||(38139730-38139870)
chr7 (202-342)||(38152902-38153041)
chr7 (202-342)||(39317010-39317150)
chr7 (182-329)||(24753192-24753338)
chr7 (225-326)||(37182305-37182406)
chr7 (186-373)||(37579246-37579432)
chr7 (205-356)||(3774070-3774222)
chr7 (226-342)||(33841093-33841208)
chr7 (214-333)||(23329012-23329131)
chr7 (182-300)||(44658385-44658503)
chr7 (208-313)||(37218049-37218154)
chr7 (182-343)||(41741368-41741528)
chr7 (226-337)||(30839095-30839207)
chr7 (211-356)||(3157084-3157228)
chr7 (203-368)||(3920527-3920680)
chr7 (182-342)||(25905644-25905803)
chr7 (226-342)||(27063153-27063269)
chr7 (226-342)||(27063349-27063465)
chr7 (266-373)||(25782909-25783016)
chr7 (240-307)||(29014928-29014995)
chr7 (226-329)||(42908003-42908106)
chr7 (236-342)||(44845107-44845213)
chr7 (246-342)||(31426023-31426119)
chr7 (226-345)||(8906551-8906670)
chr7 (282-373)||(24425364-24425455)
chr7 (182-342)||(26004404-26004552)
chr7 (241-342)||(32546207-32546311)
chr7 (241-342)||(22973403-22973504)
chr7 (213-361)||(11472664-11472810)
chr7 (267-342)||(26622966-26623041)
chr7 (260-342)||(10995830-10995912)
chr7 (288-342)||(44794052-44794105)
chr7 (288-342)||(45708889-45708943)
chr7 (241-342)||(18683989-18684090)
chr7 (225-342)||(27896436-27896553)
chr7 (267-361)||(23475266-23475360)
chr7 (226-342)||(5565269-5565385)
chr7 (276-368)||(46127195-46127287)
chr7 (246-313)||(2472027-2472094)
chr7 (211-258)||(23533563-23533610)
chr7 (202-265)||(44985856-44985919)
chr7 (267-361)||(19440013-19440107)
chr7 (273-351)||(25979926-25980004)
chr7 (273-342)||(21750797-21750866)
[»] chr6 (44 HSPs)
chr6 (182-373)||(3483841-3484032)
chr6 (182-361)||(12141376-12141555)
chr6 (182-373)||(27534663-27534854)
chr6 (182-361)||(5863301-5863480)
chr6 (211-361)||(27738763-27738913)
chr6 (182-361)||(32853835-32854014)
chr6 (182-342)||(10142436-10142596)
chr6 (182-361)||(2367317-2367496)
chr6 (225-342)||(32532550-32532667)
chr6 (211-341)||(9442441-9442570)
chr6 (182-342)||(10187998-10188151)
chr6 (201-356)||(12678031-12678186)
chr6 (182-321)||(30986284-30986423)
chr6 (212-368)||(30816244-30816398)
chr6 (225-368)||(13769056-13769199)
chr6 (227-342)||(28079659-28079774)
chr6 (226-336)||(20610944-20611054)
chr6 (267-355)||(14410858-14410946)
chr6 (267-378)||(14506060-14506171)
chr6 (183-341)||(24225709-24225873)
chr6 (225-373)||(11762424-11762572)
chr6 (226-342)||(18908903-18909019)
chr6 (182-361)||(15498315-15498494)
chr6 (225-355)||(32053085-32053209)
chr6 (255-353)||(20349063-20349161)
chr6 (226-351)||(9458664-9458789)
chr6 (182-322)||(31496464-31496604)
chr6 (182-322)||(31501850-31501990)
chr6 (225-368)||(29341240-29341383)
chr6 (209-342)||(256437-256570)
chr6 (243-363)||(14254947-14255066)
chr6 (241-337)||(9458873-9458969)
chr6 (267-333)||(14034521-14034587)
chr6 (252-361)||(12309563-12309672)
chr6 (264-368)||(34346005-34346109)
chr6 (267-342)||(24602859-24602934)
chr6 (228-311)||(32054189-32054271)
chr6 (250-342)||(5108917-5109009)
chr6 (215-341)||(21875600-21875727)
chr6 (283-342)||(32959870-32959929)
chr6 (201-258)||(14506168-14506225)
chr6 (274-342)||(7393897-7393965)
chr6 (182-258)||(14034584-14034660)
chr6 (274-342)||(29199895-29199963)
[»] chr2 (44 HSPs)
chr2 (182-373)||(24414050-24414241)
chr2 (182-356)||(30846943-30847117)
chr2 (182-373)||(9632366-9632557)
chr2 (202-342)||(7314586-7314726)
chr2 (202-342)||(37106703-37106843)
chr2 (211-342)||(37472706-37472837)
chr2 (203-345)||(12193766-12193908)
chr2 (182-342)||(8915856-8916015)
chr2 (183-342)||(13830747-13830905)
chr2 (182-361)||(36128024-36128203)
chr2 (212-342)||(45115569-45115701)
chr2 (182-342)||(10208349-10208508)
chr2 (183-373)||(31942104-31942295)
chr2 (182-342)||(13705273-13705439)
chr2 (182-373)||(19104755-19104950)
chr2 (236-342)||(45256834-45256940)
chr2 (182-361)||(10920637-10920809)
chr2 (246-342)||(38342501-38342597)
chr2 (183-342)||(6027820-6027967)
chr2 (273-342)||(25210388-25210457)
chr2 (182-361)||(37999475-37999648)
chr2 (246-342)||(43371564-43371660)
chr2 (202-330)||(44746047-44746175)
chr2 (226-329)||(26755764-26755867)
chr2 (182-342)||(42797919-42798066)
chr2 (226-342)||(22900805-22900921)
chr2 (215-331)||(37309695-37309810)
chr2 (226-313)||(10212446-10212533)
chr2 (268-345)||(3547174-3547251)
chr2 (212-305)||(12341648-12341741)
chr2 (226-342)||(15546755-15546871)
chr2 (252-347)||(24051612-24051707)
chr2 (246-368)||(35248367-35248489)
chr2 (226-342)||(14331538-14331648)
chr2 (246-342)||(30978938-30979032)
chr2 (226-342)||(44057893-44058010)
chr2 (213-312)||(40734533-40734632)
chr2 (225-305)||(34214619-34214698)
chr2 (246-296)||(13954802-13954852)
chr2 (246-296)||(14096009-14096059)
chr2 (183-300)||(18106037-18106155)
chr2 (280-330)||(33175252-33175302)
chr2 (281-342)||(18485659-18485720)
chr2 (267-368)||(35965320-35965420)
[»] chr8 (46 HSPs)
chr8 (201-373)||(43113563-43113735)
chr8 (182-361)||(32303052-32303231)
chr8 (212-342)||(29108770-29108900)
chr8 (202-342)||(27932423-27932563)
chr8 (182-373)||(24927928-24928119)
chr8 (182-368)||(20399576-20399762)
chr8 (203-361)||(37960901-37961059)
chr8 (182-318)||(5858570-5858706)
chr8 (183-342)||(24869943-24870102)
chr8 (183-373)||(24568917-24569106)
chr8 (225-361)||(40248332-40248468)
chr8 (225-345)||(45236072-45236192)
chr8 (181-329)||(4230647-4230795)
chr8 (225-333)||(35215555-35215662)
chr8 (201-368)||(1012603-1012769)
chr8 (212-342)||(27777146-27777276)
chr8 (182-373)||(17469234-17469413)
chr8 (212-342)||(39445524-39445654)
chr8 (208-341)||(29416131-29416263)
chr8 (183-345)||(17084032-17084188)
chr8 (182-356)||(1063503-1063683)
chr8 (227-342)||(28345501-28345616)
chr8 (211-342)||(30481368-30481499)
chr8 (225-368)||(34139432-34139573)
chr8 (212-361)||(34777057-34777200)
chr8 (225-321)||(14155563-14155659)
chr8 (213-339)||(17220725-17220851)
chr8 (183-342)||(11254934-11255086)
chr8 (226-311)||(15173842-15173927)
chr8 (226-342)||(15068550-15068665)
chr8 (226-342)||(27056517-27056633)
chr8 (211-342)||(29918617-29918748)
chr8 (267-368)||(14186304-14186405)
chr8 (225-329)||(6388477-6388581)
chr8 (295-342)||(2075868-2075915)
chr8 (212-361)||(5700347-5700484)
chr8 (208-332)||(32392330-32392454)
chr8 (260-342)||(8545345-8545427)
chr8 (225-342)||(14687409-14687526)
chr8 (267-367)||(36131920-36132020)
chr8 (225-303)||(2075795-2075873)
chr8 (246-342)||(2183588-2183684)
chr8 (226-342)||(10297468-10297584)
chr8 (209-253)||(33631856-33631900)
chr8 (267-342)||(9642354-9642429)
chr8 (252-338)||(34021490-34021576)
[»] chr5 (57 HSPs)
chr5 (182-342)||(12866470-12866630)
chr5 (182-361)||(4920817-4920996)
chr5 (182-342)||(40517816-40517976)
chr5 (183-342)||(15890217-15890375)
chr5 (227-342)||(38972932-38973047)
chr5 (182-340)||(13401923-13402081)
chr5 (182-342)||(20973415-20973575)
chr5 (182-373)||(18206998-18207188)
chr5 (182-337)||(30996611-30996765)
chr5 (202-342)||(4583129-4583269)
chr5 (183-361)||(10127072-10127243)
chr5 (182-361)||(5908607-5908786)
chr5 (183-342)||(29245871-29246030)
chr5 (184-342)||(12834495-12834653)
chr5 (226-342)||(28568984-28569100)
chr5 (182-361)||(22694821-22694999)
chr5 (182-333)||(33727920-33728071)
chr5 (182-342)||(6155839-6155997)
chr5 (214-343)||(16311244-16311373)
chr5 (212-361)||(42987428-42987577)
chr5 (202-342)||(17853232-17853371)
chr5 (183-342)||(6369706-6369864)
chr5 (225-342)||(28045666-28045782)
chr5 (226-342)||(23044954-23045070)
chr5 (202-361)||(6092468-6092616)
chr5 (267-361)||(27900405-27900499)
chr5 (267-361)||(38006473-38006567)
chr5 (225-342)||(2681226-2681343)
chr5 (284-373)||(35194010-35194099)
chr5 (263-342)||(6810168-6810247)
chr5 (226-299)||(43523801-43523874)
chr5 (225-373)||(2412688-2412836)
chr5 (282-373)||(12447360-12447451)
chr5 (280-342)||(35311832-35311894)
chr5 (182-304)||(39422394-39422516)
chr5 (226-299)||(18116480-18116553)
chr5 (184-265)||(42717551-42717632)
chr5 (264-368)||(17153153-17153257)
chr5 (295-342)||(1218765-1218812)
chr5 (211-265)||(3564687-3564740)
chr5 (280-342)||(10822543-10822605)
chr5 (201-286)||(33420285-33420370)
chr5 (246-342)||(20634192-20634288)
chr5 (246-342)||(20650306-20650402)
chr5 (274-342)||(27302746-27302814)
chr5 (214-361)||(29664962-29665106)
chr5 (182-265)||(1218812-1218895)
chr5 (267-342)||(2985157-2985232)
chr5 (267-345)||(34259262-34259340)
chr5 (227-313)||(40187621-40187707)
chr5 (276-333)||(8453386-8453443)
chr5 (241-342)||(12915483-12915584)
chr5 (182-258)||(12447463-12447538)
chr5 (264-320)||(15564668-15564724)
chr5 (236-300)||(24207736-24207800)
chr5 (182-305)||(27088292-27088413)
chr5 (213-340)||(32574887-32575015)
[»] scaffold0036 (1 HSPs)
scaffold0036 (225-373)||(33372-33526)
[»] scaffold0014 (1 HSPs)
scaffold0014 (183-311)||(14103-14230)
[»] scaffold0519 (1 HSPs)
scaffold0519 (183-342)||(10307-10459)
[»] scaffold0184 (1 HSPs)
scaffold0184 (246-342)||(2979-3075)
[»] scaffold0022 (1 HSPs)
scaffold0022 (225-368)||(90581-90718)
[»] scaffold0294 (1 HSPs)
scaffold0294 (215-368)||(14759-14912)
[»] scaffold0008 (2 HSPs)
scaffold0008 (226-335)||(67766-67875)
scaffold0008 (226-335)||(75609-75718)
[»] scaffold0027 (1 HSPs)
scaffold0027 (183-311)||(7738-7865)
[»] scaffold0157 (1 HSPs)
scaffold0157 (202-299)||(14900-14998)
[»] scaffold0135 (1 HSPs)
scaffold0135 (267-368)||(36138-36239)
[»] scaffold0059 (1 HSPs)
scaffold0059 (261-342)||(70105-70186)
[»] scaffold0009 (1 HSPs)
scaffold0009 (246-343)||(107373-107470)
[»] scaffold0182 (1 HSPs)
scaffold0182 (269-345)||(16974-17050)
[»] scaffold0013 (2 HSPs)
scaffold0013 (246-342)||(128103-128199)
scaffold0013 (226-342)||(105431-105547)
[»] scaffold0005 (1 HSPs)
scaffold0005 (246-342)||(211374-211470)
[»] scaffold0244 (1 HSPs)
scaffold0244 (225-342)||(4543-4659)
[»] scaffold0007 (1 HSPs)
scaffold0007 (267-373)||(197330-197436)
[»] scaffold0795 (1 HSPs)
scaffold0795 (228-309)||(267-348)
[»] scaffold0189 (1 HSPs)
scaffold0189 (273-330)||(4280-4337)


Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-117; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 102 - 378
Target Start/End: Complemental strand, 34119906 - 34119630
Alignment:
Q  102 cccaactatgatccagctttctcatttttacataaaatcgagggctttatttcaaggtttataaccaagcaagctaacaagcaacaaaacccatacatat 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |    
T  34119906 cccaactatgatccagctttctcatttttacataaaatcgagggctttatttcaaggtttataaccaagcaagctaacaagcaacaaaacccatccatgt 34119807  T
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||||||||||||||||||| |||||||||||||||| ||| |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  34119806 ggttaaccacccgaaccaaatctaatttgacgggttttccccattttgattgggtttgggtatgagtttgagtttttcccgattttaaaacacgggtatg 34119707  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactactctgtg 378  Q
     ||||| ||||  |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||| ||||    
T  34119706 agacggataacaggtatataggtacccaccccgaacccatacccaaatccgtcccaaatgcagaaaactactttgtg 34119630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 183 - 373
Target Start/End: Original strand, 4557224 - 4557414
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| |||||   |||||| |||||||||| |||   |||||||||||||||||||||||||||||||||| |||||| ||||| ||||| ||||    
T  4557224 caacaaaactcatacccgtggttacccacccgaacaaaacccaatttgacgggtttttcccgttttgactgggtttgggtatgggtttgggttttccccg 4557323  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
     ||| |||| | |||||||||||||||||||||||||||||||||||||||||||||||| || ||||  |||| ||||||||||| ||||    
T  4557324 ttttcaaaacatgggtatgggacgggtaacgagtatataggtacccaccccgaacccatacccaaatctatcccgaatgcagaaaattact 4557414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 182 - 372
Target Start/End: Original strand, 4015962 - 4016152
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| |||||||||| |||   |||||||||||||||||||||||||||| ||||| |||||| ||||| ||||| |||    
T  4015962 gcaacaaaacccatacccgtggttacccacccgaacgaaactcaatttgacgggtttttcccgttttgactaggtttgggtatgggtttgggttttcccc 4016061  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactac 372  Q
    ||||| |||| | ||||||||||||| ||||| |||||||||||||||| ||||||||||| || ||  |||||| |||||||||||||||    
T  4016062 gatttcaaaacatgggtatgggacggataacgggtatataggtacccactccgaacccatacccaaactcgtcccgaatgcagaaaactac 4016152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 49580233 - 49580074
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||   |||||| || ||||||||||||  ||||||||||||||| |||||||||||||||||| |||||| || || ||||| ||||    
T  49580233 caacaaaacccatacccgtggttatccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttccccg 49580134  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    || | |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  49580133 atctcaaaacacgggtatgggacgggtaacgagtatataggtacccacctcgaacccata 49580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 7469696 - 7469856
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| ||     
T  7469696 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttccct 7469795  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||| |  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7469796 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccata 7469856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 201 - 341
Target Start/End: Complemental strand, 54317295 - 54317155
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| || ||||||||||||  ||||||||||||||| ||||||||||||||||||  ||||| ||||||||||| |||||||| |||| ||  ||||    
T  54317295 tggttacccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgagtatgtgtttgagttttccccgatttcaaaacacaagtat 54317196  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccat 341  Q
     |||||||||||| |||||||||||||||||||||||||||    
T  54317195 aggacgggtaacgggtatataggtacccaccccgaacccat 54317155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 29284506 - 29284315
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| |||||   |||||| || |||||||||||   |||||||||||||||  ||||||||||||||||| |||||| || || |||||||||    
T  29284506 gcaacaaaactcatacccgtggttacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttgggtatgggtatgggtttttccc 29284407  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| || || |||||||  ||| | |||||||||    
T  29284406 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccagcccgaacccatacccaaacccgtcccagatgtaaaaaactact 29284315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 39655191 - 39655382
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   ||||||||||||||| |||||||||| ||||||| |||||| || || ||||| |||    
T  39655191 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggtatgggtatgggttttcccc 39655290  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| | |||| ||||||||||||||||||||  ||||||||||||||||||| |||||||| || || ||||| | |||| | |||||||||    
T  39655291 gatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaacccatacccaaacccgtctcaaatgtaaaaaactact 39655382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 39728841 - 39728662
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||  |||||||||||  |||||||||| |||| |||||||||||||||||| ||||||||| |  ||||| | |    
T  39728841 gcaacaaaacccatacccgtggttacccgtccgaaccaaatccaatttgacggattttccccgttttgactgggtttgggtatgagtataggttttcctc 39728742  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| |||||||||||| |||||||| ||||||| |||||||||||||||||||| || || ||||||| ||||    
T  39728741 gatctcaaaatacgggtatgggatgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatg 39728662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 215 - 342
Target Start/End: Complemental strand, 52198292 - 52198165
Alignment:
Q  215 aaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacga 314  Q
    |||||||  ||||||||||||||||| | ||||||||||||||| |||||| || || |||||||||||| | |||| || ||||||||||||||||||     
T  52198292 aaccaaacctaatttgacgggttttttctgttttgactgggtttgggtatgggtatgggtttttcccgatctcaaaacacaggtatgggacgggtaacgg 52198193  T
Q  315 gtatataggtacccaccccgaacccata 342  Q
    ||||||||||||||||||||||||||||    
T  52198192 gtatataggtacccaccccgaacccata 52198165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 213 - 342
Target Start/End: Complemental strand, 53632043 - 53631914
Alignment:
Q  213 cgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaac 312  Q
    |||||||||  |||||||||||||||| | |||||||| ||||| |||||||| ||||||||||| ||  ||||||||| ||| ||||| ||||||||||    
T  53632043 cgaaccaaacttaatttgacgggttttcctcgttttgaatgggtataggtatgggtttgagttttcccaaattttaaaacacgtgtatgagacgggtaac 53631944  T
Q  313 gagtatataggtacccaccccgaacccata 342  Q
    | ||||||||||||||||||||||||||||    
T  53631943 gggtatataggtacccaccccgaacccata 53631914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 22535759 - 22535919
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || |||||||||||   ||||||| ||||||| |||||||||||||||||| |||||| || |||||||| |||    
T  22535759 gcaacaaaacccatacccgcggttatccgcccgaaccaaactcaatttgatgggttttccccgttttgactgggtttgggtatgggtatgagttttcccc 22535858  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
     |||| |||| |||| |||||||||||||||| ||||| ||| ||||||||||||||||||    
T  22535859 aatttcaaaacacggatatgggacgggtaacgggtatacaggcacccaccccgaacccata 22535919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 34026124 - 34025964
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || |||||||||||   |||||||||| ||||||||||||||||||||||| | |||| || || ||||| |||    
T  34026124 gcaacaaaacccatacccgcggttaccctcccgaaccaaaaccaatttgacggttttttcccgttttgactgggtttggatatgggtatgggttttcccc 34026025  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| || |||||||||||||||||||||||||||||  ||||||||||| ||||    
T  34026024 gatttcaaaacacaggtatgggacgggtaacgagtatataggtttccaccccgaactcata 34025964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 52572779 - 52572619
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   |||||||| |||||| ||| |||||||||||||| |||||| || |||||||| | |    
T  52572779 gcaacaaaacccatacccgtggttatccgcccgaaccaaactcaatttgacaggttttccccattttgactgggtttgggtatgggtatgagttttcctc 52572680  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||| | |||| ||||||||||||||||||||| ||||||||| |||||||||||| |||||    
T  52572679 gatctcaaaacacgggtatgggacgggtaacgggtatatagggacccaccccgaatccata 52572619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 42758544 - 42758353
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || ||||| |||||   |||||||||| |||| |||||||| ||||||||| |||||||||||| ||||  |||    
T  42758544 gcaacaaaacccatacccgtggttacccgcccgatccaaacccaatttgacggattttccccgttttaactgggtttgggtatgagtttgggtttccccc 42758445  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||| |||| || |||||||||||||||||  |||||||||||  ||||||||||||||| || || ||||||| || | |||||| ||||    
T  42758444 gatttcaaaacacaggtatgggacgggtaacaggtatataggtatgcaccccgaacccatacccaaacccgtcccgaacgaagaaaattact 42758353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 23580954 - 23580837
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||||||||||||||||||||||||||| |||||| || |||||||| ||| |||| |||| ||| |||||  |||||||||| ||||||||||    
T  23580954 aatttgacgggtttttcccgttttgactgggtttgggtatgggtatgagttttccccaatttcaaaacacgagtatgaaacgggtaacgggtatataggt 23580855  T
Q  325 acccaccccgaacccata 342  Q
    |||||| |||||||||||    
T  23580854 acccactccgaacccata 23580837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 213 - 342
Target Start/End: Original strand, 48390766 - 48390895
Alignment:
Q  213 cgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaac 312  Q
    ||||||||||  |||||||||| |||| |||||||||||||||||| |||||| || || ||||| |||||||| |||| ||||||||||||||||||||    
T  48390766 cgaaccaaatccaatttgacggattttccccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacacgggtatgggacgggtaac 48390865  T
Q  313 gagtatataggtacccaccccgaacccata 342  Q
    | | ||||||||||||| || |||||||||    
T  48390866 gggaatataggtacccatcctgaacccata 48390895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 225 - 373
Target Start/End: Complemental strand, 44252874 - 44252726
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||||| |  ||| |||||||||||||| |||||  ||||||||||    
T  44252874 aatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttccccgatctcgaaacacgggtatgggacgtgtaacaggtatataggt 44252775  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||||||||||||||||| || || ||||||| |||  | |||||||||    
T  44252774 acccaccccgaacccatacccaaacccgtcccaaatataaaaaactact 44252726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 225 - 373
Target Start/End: Original strand, 44953396 - 44953544
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| |||||||||||||||||| ||| || || || ||||| |||||| | |||| ||||||||||||||||||||| ||||||||||    
T  44953396 aatttgacgggttttccccgttttgactgggtttgggtttgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataggt 44953495  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    || |||||||||| ||||  | || ||||||| |||| | |||||||||    
T  44953496 actcaccccgaactcatactcaaacccgtcccaaatgtaaaaaactact 44953544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 215 - 341
Target Start/End: Complemental strand, 19111871 - 19111745
Alignment:
Q  215 aaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacga 314  Q
    ||||||||  |||||||||| |||||||| |||||| ||||||| ||||||||||||||||||||||||||| |||| ||||||| |||| || |||||     
T  19111871 aaccaaatccaatttgacggatttttccctttttgattgggtttgggtatgagtttgagtttttcccgatttcaaaacacgggtacgggatggataacgg 19111772  T
Q  315 gtatataggtacccaccccgaacccat 341  Q
    ||||||| ||||||||||  |||||||    
T  19111771 gtatataagtacccaccctaaacccat 19111745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 23154026 - 23154142
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||||||||||||||||| |||| |||| |||||| || || ||||| |||||||| ||| | ||||||||| |||||||||||||||||||||    
T  23154026 aatttgacgggtttttcccgttttaactgagtttgggtatgggtatgggttttccccgatttcaaaca-cgggtatggaacgggtaacgagtatataggt 23154124  T
Q  325 acccaccccgaacccata 342  Q
    |||||| |||||||||||    
T  23154125 acccactccgaacccata 23154142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 343
Target Start/End: Complemental strand, 43582727 - 43582587
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || ||||||||||||  ||||||| |||||||  ||||||| |||||||||  ||||| || |||||||| |||||||| |||| |||||||||    
T  43582727 ggttacccgcccgaaccaaatccaatttgatgggttttctccgtttttactgggtttgagtatgtgtatgagttttccccgatttcaaaacacgggtatg 43582628  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccatat 343  Q
     ||||||||||| |||| |||||||||| |||||||||||||    
T  43582627 agacgggtaacgtgtatgtaggtaccca-cccgaacccatat 43582587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 44639401 - 44639284
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||| |||||| ||| |||||||||||||| |||||| || || ||||| ||  || | |||| ||||||||||||||||||||| ||||||||||    
T  44639401 aatttgactggttttccccattttgactgggtttgggtatgggtatgggttttcccatatctcaaaacacgggtatgggacgggtaacgggtatataggt 44639302  T
Q  325 acccaccccgaacccata 342  Q
    ||||||||||||||||||    
T  44639301 acccaccccgaacccata 44639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 23546866 - 23547051
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |  ||||||||   ||||| ||||||||| |||||||||||||||||| |||||| ||||      | |||    
T  23546866 gcaacaaaacccatacccgtggttacccgcatgaaccaaacccaatttaacgggttttccccgttttgactgggtttgggtatgggttt------tcccc 23546959  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || ||  |||||| |||| | |||||||||    
T  23546960 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaactcgtcccaaatgtaaaaaactact 23547051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 214 - 342
Target Start/End: Complemental strand, 29842445 - 29842318
Alignment:
Q  214 gaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    ||||||||| ||||||||||||||||||  |||  || ||||||| |||||  || || ||||| ||||||||||||| ||||||||||||| |||||||    
T  29842445 gaaccaaatctaatttgacgggtttttcatgttcggattgggtttgggtataggtatgggtttt-cccgattttaaaacacgggtatgggactggtaacg 29842347  T
Q  314 agtatataggtacccaccccgaacccata 342  Q
     | ||||||||||||||||||||||||||    
T  29842346 ggaatataggtacccaccccgaacccata 29842318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 48305579 - 48305715
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| ||||||||||||||   ||| ||||||||||| ||| |||||||||||||| | |||| || |||||||| ||| |||| |||| |||||||||    
T  48305579 ggttacccacccgaaccaaacccaatctgacgggttttccccattttgactgggtttggttatgggtatgagttttccccaatttcaaaacacgggtatg 48305678  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacc 338  Q
    | ||| ||| || ||||||||||||||||||||||||    
T  48305679 gaacgagtatcgggtatataggtacccaccccgaacc 48305715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 373
Target Start/End: Complemental strand, 831129 - 830988
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| |||||||||||||||||| |||||| || |      |||||| ||| |||| ||||||||| ||||| |||||||||||| |||    
T  831129 aatttgacgggttttccccgttttgactgggtttgggtatgggtat------ttcccgttttcaaaacacgggtatgagacggataacgagtatat-ggt 831037  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||||||| ||||||||| || ||| |||||| ||||||||||| ||||    
T  831036 acccaccctgaacccatacccaaattcgtcccgaatgcagaaaattact 830988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 34154541 - 34154424
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||| |||| |||||||||||||||||| | |||| || || ||||| |||||||| |||| | |||||||  ||||||||| || ||||||||    
T  34154541 aatttgacggattttccccgttttgactgggtttggatatgggtatgtgttttccccgatttcaaaacatgggtatgaaacgggtaacaagaatataggt 34154442  T
Q  325 acccaccccgaacccata 342  Q
    ||||||||||||||||||    
T  34154441 acccaccccgaacccata 34154424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 42243514 - 42243418
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatata 321  Q
    ||||||||||||||| |||| ||||||||||||| |||||||||||| |||||||||||||| || | ||||||||| || |||||||||| |||||    
T  42243514 aatttgacgggttttccccggtttgactgggtttgggtatgagtttgggtttttcccgatttcaatacacgggtatgagatgggtaacgaggatata 42243418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 245 - 361
Target Start/End: Complemental strand, 44172733 - 44172617
Alignment:
Q  245 ttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatc 344  Q
    ||||||||||||||  ||||| || || ||||| |||||| | |||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| |    
T  44172733 ttttgactgggtttgagtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacc 44172634  T
Q  345 ctaatccgtccccaatg 361  Q
    | || ||||||| ||||    
T  44172633 caaacccgtcccaaatg 44172617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 245 - 361
Target Start/End: Complemental strand, 44179433 - 44179317
Alignment:
Q  245 ttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatc 344  Q
    ||||||||||||||  ||||| || || ||||| |||||| | |||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| |    
T  44179433 ttttgactgggtttgagtatgggtatgggttttccccgatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacc 44179334  T
Q  345 ctaatccgtccccaatg 361  Q
    | || ||||||| ||||    
T  44179333 caaacccgtcccaaatg 44179317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 3385803 - 3385934
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    |||||||||||   |||| |||||||||| |||| ||||||||||||||||||||  ||||| ||||| || |||| |||| ||||||| ||||| ||||    
T  3385803 cccgaaccaaacccaattcgacgggttttccccgctttgactgggtttaggtatggatttgaatttttacccatttcaaaacacgggtacgggacaggta 3385902  T
Q  311 acgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||||||| ||||| |||| |||||    
T  3385903 acgaggatataggtagccaccacgaatccata 3385934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 34121651 - 34121584
Alignment:
Q  18 ggtttttggttattttttcctaaccctaacaaaaatggtaataatacaataaatctcaattatatgta 85  Q
    ||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  34121651 ggtttttagttatttttgcccaaccctaacaaaaatggtaataatacaataaatctcaattatatgta 34121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 44106755 - 44106870
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||| |||| |||||||||||||||||| ||||||||| || ||||| ||| || |||||| |||||||||||||| ||||||  |||||||||    
T  44106755 aatttgacgg-ttttccccgttttgactgggtttgggtatgagtatg-gttttccccaatcttaaaacacgggtatgggacgcgtaacggatatataggt 44106852  T
Q  325 acccaccccgaacccata 342  Q
    | | ||||||||||||||    
T  44106853 atctaccccgaacccata 44106870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 30616244 - 30616359
Alignment:
Q  227 tttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtac 326  Q
    ||||| |||||||||||||||||||||  |||  ||||| ||||| ||||| |||||||| |||| |||| ||||||||||||||||||  ||||  ||     
T  30616244 tttgaggggtttttcccgttttgactgaatttgagtatgggtttgggttttccccgatttcaaaacacggatatgggacgggtaacgaggttatatataa 30616343  T
Q  327 ccaccccgaacccata 342  Q
    ||||||||||||||||    
T  30616344 ccaccccgaacccata 30616359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 212 - 354
Target Start/End: Original strand, 30904766 - 30904905
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    |||||| ||||  ||||||||||||||  |||| ||| ||||| ||| ||||||||||||  ||||| | ||||| |||| ||||||| ||||||||||     
T  30904766 ccgaactaaatccaatttgacgggtttc-cccgcttttactgg-tttgggtatgagtttggcttttttctgatttcaaaacacgggtacgggacgggta- 30904862  T
Q  312 cgagtatataggtacccaccccgaacccatatcctaatccgtc 354  Q
    || | |||||||||||||||||||||||||| || ||||||||    
T  30904863 cggggatataggtacccaccccgaacccatacccaaatccgtc 30904905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 202 - 299
Target Start/End: Original strand, 6738343 - 6738440
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    ||||| || |||||||||||   |||||||| ||||||||||||||||||||||||| |||||| || || ||||| |||||||| |||| |||||||    
T  6738343 ggttacccgcccgaaccaaacccaatttgacaggtttttcccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacacgggta 6738440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 10043243 - 10043360
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||||||||  ||  ||||||||||||| |||||| ||||| ||||| || | ||| |||| | ||||||||||||||||||| |  |||| |     
T  10043243 aatttgacgggttttctccactttgactgggtttgggtatgggtttgggttttccctggtttcaaaacatgggtatgggacgggtaacggggttatatgc 10043342  T
Q  325 acccaccccgaacccata 342  Q
    ||||||||||||||||||    
T  10043343 acccaccccgaacccata 10043360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 31126749 - 31126832
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatg 265  Q
    |||||||||||||||||  |||||||||||||||||||||  ||| |||| ||||||| |||||||||| | ||||| ||||||    
T  31126749 gcaacaaaacccatacacgtggttaaccacccgaaccaaacttaaattgatgggttttccccgttttgatttggtttgggtatg 31126832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 31126826 - 31126903
Alignment:
Q  295 gggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactac 372  Q
    ||||||||||||||||||  ||||||||||| ||||||||||| |||| || ||  |||||| |||||||||||||||    
T  31126826 gggtatgggacgggtaacatgtatataggtatccaccccgaactcatacccaaactcgtcccaaatgcagaaaactac 31126903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 301
Target Start/End: Original strand, 23910213 - 23910289
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    |||||||||| ||||| |||||||||||||||||  ||||||||||||||||| | |||||| |||| |||| ||||    
T  23910213 aatttgacggattttttccgttttgactgggtttgtgtatgagtttgagttttcctcgatttcaaaacacggatatg 23910289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 313
Target Start/End: Original strand, 3414481 - 3414586
Alignment:
Q  208 ccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgg 307  Q
    ||||||||||||||   |||| ||  |||||| |||| ||||| ||||||| | |||| ||||||||||||||||||||| ||| ||| ||| ||||| |    
T  3414481 ccacccgaaccaaacccaattcgataggttttccccgctttgattgggtttggttatgggtttgagtttttcccgattttcaaacacgagtacgggacag 3414580  T
Q  308 gtaacg 313  Q
    ||||||    
T  3414581 gtaacg 3414586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 233 - 342
Target Start/End: Complemental strand, 4553309 - 4553200
Alignment:
Q  233 gggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccc 332  Q
    |||||||  ||| |||||||||| ||||||||| |||||||||||||||||||| |||| | ||||  || ||||||||   | |||||  ||| |||||    
T  4553309 gggttttctccgctttgactgggcttaggtatgcgtttgagtttttcccgatttcaaaacatgggtgcggaacgggtaatagggatataaatacacaccc 4553210  T
Q  333 cgaacccata 342  Q
    ||||||||||    
T  4553209 cgaacccata 4553200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 49025765 - 49025655
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    ||||| ||||| |||||| | |||| ||||||||||||||||||||  |||||||||||| ||  ||||||||||| || || ||||||| |||| | ||    
T  49025765 gtttgggttttccccgatctcaaaacacgggtatgggacgggtaacaggtatataggtacaca-tccgaacccatacccaaacccgtcccaaatgtaaaa 49025667  T
Q  367 aactactctgtg 378  Q
    || |||| ||||    
T  49025666 aattactttgtg 49025655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 27252705 - 27252639
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttt 277  Q
    ||||||| |||| ||||||||||||||||  | | ||||| ||||||| ||||||||||||||||||    
T  27252705 cccgaactaaatctaatttgacgggttttatcggatttgattgggtttgggtatgagtttgagtttt 27252639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 312
Target Start/End: Original strand, 35687473 - 35687539
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaac 312  Q
    |||||||||||||  ||||||||||||||||| |||||||| | || ||||||| | ||||||||||    
T  35687473 tttgactgggtttgagtatgagtttgagttttccccgatttcataatacgggtacgagacgggtaac 35687539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 214 - 299
Target Start/End: Complemental strand, 20087135 - 20087050
Alignment:
Q  214 gaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    |||||||||  |||||||||| ||||  ||||||||||||||||| | |||| || || ||||| |||||||| |||| |||||||    
T  20087135 gaaccaaatccaatttgacggattttctccgttttgactgggtttggatatgggtatgggttttccccgatttcaaaacacgggta 20087050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 29858493 - 29858574
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggta 263  Q
    ||||||||||||||||   |||||| || |||||||||||   ||||| |||| |||| |||||||||||||||||| ||||    
T  29858493 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttaacggattttccccgttttgactgggtttgggta 29858574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 1772361 - 1772477
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| |||| |||| ||||||||||| | ||||||  |||| |||||   ||||||||||| |||||||  || || |||| | | ||||| |||    
T  1772361 atttgacggattttccccgatttgactgggtctgggtatggttttgggttttcttcgattttaaaatacgggtacagggcgagtaatgcggatatatgta 1772460  T
Q  326 cccaccccgaacccata 342  Q
    |||||||||||| ||||    
T  1772461 cccaccccgaactcata 1772477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 286
Target Start/End: Complemental strand, 40890478 - 40890406
Alignment:
Q  214 gaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattt 286  Q
    ||||||||  ||||| |||||||||||| |||||||||| ||||| | ||||||| |||||||| | ||||||    
T  40890478 gaaccaaacctaattggacgggtttttctcgttttgactaggtttggatatgagtatgagttttcctcgattt 40890406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 183 - 258
Target Start/End: Original strand, 10371192 - 10371267
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggttt 258  Q
    |||||||||||| ||   |||||| || | |||||||||   ||||||||||||||| ||||||||||||||||||    
T  10371192 caacaaaacccagacccgtggttacccgctcgaaccaaacccaatttgacgggttttccccgttttgactgggttt 10371267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 299
Target Start/End: Complemental strand, 2490411 - 2490358
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    ||||||||||||| | |||| ||||||||||| |||||||| |||| |||||||    
T  2490411 tttgactgggtttggatatgggtttgagttttccccgatttcaaaatacgggta 2490358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 215 - 342
Target Start/End: Original strand, 17146105 - 17146228
Alignment:
Q  215 aaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacga 314  Q
    ||||||||  ||||||||||||||  |||||||||||    ||| |||||| || || |||||| || || | |||| | |||||||| |||||||||      
T  17146105 aaccaaatccaatttgacgggtttc-cccgttttgaca---tttgggtatgggtatgggttttttccaatctcaaaacatgggtatggaacgggtaacag 17146200  T
Q  315 gtatataggtacccaccccgaacccata 342  Q
     |||||||||| ||||||||||||||||    
T  17146201 ttatataggtatccaccccgaacccata 17146228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 276
Target Start/End: Complemental strand, 34593279 - 34593214
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttc-ccgttttgactgggtttaggtatgagtttgagttt 276  Q
    ||||||||||   |||||||||| |||||  ||||||||||||| |||||||||| ||||||||||    
T  34593279 ccgaaccaaacccaatttgacggatttttttccgttttgactggatttaggtatgggtttgagttt 34593214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 49025838 - 49025762
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggttt 258  Q
    ||||||||| ||||||   |||||| || || ||||||||   ||||||| |||||||||| |||||||||||||||    
T  49025838 gcaacaaaatccatacccgtggttacccgcctgaaccaaacccaatttgatgggtttttcctgttttgactgggttt 49025762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 9e-52; HSPs: 68)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 26565007 - 26564816
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| |||||||||||||||  |||||||||| ||||   |||||||||||||||| |||||||||||||| ||| |||    
T  26565007 gcaacaaaacccatacccgtggttacccacccgaaccaaatccaatttgacggattttcttcgttttgactgggtttgggtatgagtttgagctttcccc 26564908  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||| ||||  |||||||||||||||||||| |||||||||||||||||||||| ||||| || || ||||||| ||||||||||||||||    
T  26564907 gatttcaaaacgcgggtatgggacgggtaacgggtatataggtacccaccccgaaaccatacccaaacccgtcccaaatgcagaaaactact 26564816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 375
Target Start/End: Complemental strand, 7609146 - 7608953
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| |||||||||| |||   ||||||||||||||| |||||||||||||| ||| |||||| || || ||||| |||    
T  7609146 gcaacaaaacccatactcgtggttacccacccgaactaaacccaatttgacgggttttccccgttttgactggatttgggtatgggtatgggttttcccc 7609047  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactactct 375  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| |||| | |||||||||||    
T  7609046 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactactct 7608953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 11028249 - 11028089
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||||  |||||| ||||||||||||||   |||||||||||||||  ||||||||||||| ||| |||||| || || ||||| |||    
T  11028249 gcaacaaaacccatacacgtggttacccacccgaaccaaacccaatttgacgggttttctccgttttgactggatttgggtatgggtatgggttttcccc 11028150  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||| | |||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  11028149 gatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaactcata 11028089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 184 - 361
Target Start/End: Original strand, 47550274 - 47550451
Alignment:
Q  184 aacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccga 283  Q
    |||||||||||||||| |||||| || |||||||||||   |||||| ||| |||| ||| |||||||||||||| |||||  || |||||||| |||||    
T  47550274 aacaaaacccatacatgtggttacccgcccgaaccaaactcaatttggcggattttccccattttgactgggtttgggtataggtatgagttttccccga 47550373  T
Q  284 ttttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    | | |||| ||||||||||||||||||||  |||||||||||||||||||||||||||| || || ||||||| ||||    
T  47550374 tctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 47550451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 55826542 - 55826721
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||  |||||||||||  |||||||||| |||| || ||||||||||||||| | ||||||| || ||||| |||    
T  55826542 gcaacaaaacccatacccgtggttacccgtccgaaccaaatccaatttgacggattttccctgttttgactgggtttggatatgagtatgggttttcccc 55826641  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| |  ||| || |||||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||||    
T  55826642 gatctcgaaacacaggtatgggacgggtaacgggtatataggtacccaccccgaacccatatccaaacccgtcccaaatg 55826721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 215 - 336
Target Start/End: Complemental strand, 37107553 - 37107433
Alignment:
Q  215 aaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacga 314  Q
    |||||||| |||||||||||||||||||| ||||||||||||||  ||||||||||| ||||| ||| |||| |||| |||||||||||||||||||||     
T  37107553 aaccaaatttaatttgacgggtttttcccattttgactgggtttgtgtatgagtttgggtttt-cccaatttcaaaacacgggtatgggacgggtaacgg 37107455  T
Q  315 gtatataggtacccaccccgaa 336  Q
    ||||||||||||||||||||||    
T  37107454 gtatataggtacccaccccgaa 37107433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 6382191 - 6382370
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||| |||||||||||   |||||| || |||||| ||||   ||||||||||||||| |||| ||||||||||||| |||||| || || |||||  ||    
T  6382191 gcaataaaacccatacccgtggttacccgcccgaatcaaacccaatttgacgggttttccccgctttgactgggtttgggtatgggtatgggttttctcc 6382290  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| ||||    
T  6382291 gatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 6382370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 44317711 - 44317532
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   ||||||  | |||||| ||||   |||||||||| |||| |||||||||||||||||| |||||| || || ||||| |||    
T  44317711 gcaacaaaacccatacccgtggttactcgcccgaatcaaacccaatttgacggattttccccgttttgactgggtttgggtatgggtatgggttttcccc 44317612  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| ||||    
T  44317611 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 44317532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 202 - 356
Target Start/End: Original strand, 15987201 - 15987355
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| ||||||||||||||   |||||||||||||||  || |||||| ||||||| |||||| || |||||||| || |||||||||| |||||||||    
T  15987201 ggttacccacccgaaccaaacccaatttgacgggttttctccattttgattgggtttgggtatgggtatgagttttcccagattttaaaacacgggtatg 15987300  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccc 356  Q
    ||| |||||||| |||||||| ||||||||||||||||||| || || |||||||    
T  15987301 ggatgggtaacgggtatatagatacccaccccgaacccatacccaaacccgtccc 15987355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 5902539 - 5902724
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||| ||||   |||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| ||||      | |||    
T  5902539 gcaacaaaacctatacccgtggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgggttt------tcccc 5902632  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| |||| | |||||||||    
T  5902633 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 5902724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 201 - 373
Target Start/End: Complemental strand, 21424018 - 21423846
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| || ||||||||||||  |||||||||| ||||||||||||||||||||||| |||||| || || ||||| ||| || |  ||| ||||||||    
T  21424018 tggttacccgcccgaaccaaatccaatttgacggatttttcccgttttgactgggtttgggtatgggtatgggttttccccaatctcgaaacacgggtat 21423919  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    | ||||||||||| ||||||||||||||||||| ||||||||  | || ||||||| |||| | |||||||||    
T  21423918 gagacgggtaacgggtatataggtacccaccccaaacccatacacaaacccgtcccaaatgtaaaaaactact 21423846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 11122788 - 11122979
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| |||||   |||||| || |||||||||||   |||||||||| ||||| |||||||||||| |||| |||||| || || |||||  ||    
T  11122788 gcaacaaaactcatacccgtggttacccgcccgaaccaaactcaatttgacggattttttccgttttgactgagtttgggtatgggtatgggttttctcc 11122887  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  | || ||||||| |||| | |||||||||    
T  11122888 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatactcaaacccgtcccaaatgtaaaaaactact 11122979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 31752631 - 31752472
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||    ||||| || |||||| |||||  |||||||||||||||| ||||||||| ||||||| | |||| || || ||||| ||||    
T  31752631 caacaaaacccatacccgcggttacccgcccgaatcaaatccaatttgacgggtttttaccgttttgattgggtttggatatgggtatgggttttccccg 31752532  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||| ||||||||| |||| ||||||||||||||||| |||||||||||||||||    
T  31752531 atttcaaaacacgggtatgagacgagtaacgagtatataggttcccaccccgaacccata 31752472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 31918477 - 31918656
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||    |||||| |  |||||||||||   ||||||||||||||| |||||||||||||||||| ||||||||| || ||||| |||    
T  31918477 gcaacaaaacccatatccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgagtatgggttttcccc 31918576  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| |  ||| |||||||||||||| |||| | |||||||| ||||||||||||||||||| || || ||||||| ||||    
T  31918577 gatctcgaaacacgggtatgggacgagtaatgggtatatagttacccaccccgaacccatacccaaacccgtcccaaatg 31918656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 43893403 - 43893213
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || ||||| |||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||  |||    
T  43893403 gcaacaaaacccatacccgtggttacccgcccgagccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttc-ccc 43893305  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||||||||||||||| ||||||||||| ||||||||||  |||| || || ||||||| |||| | |||||||||    
T  43893304 gatctcgaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaattcatacccaaacccgtcccaaatgtaaaaaactact 43893213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 368
Target Start/End: Original strand, 6481954 - 6482140
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||| ||||   |||||| ||||||||| ||||   |||||||||| ||||  | ||||||| ||||||| |||||| ||||| ||||| |||    
T  6481954 gcaacaaaacctatacccgtggttatccacccgaatcaaactcaatttgacggattttctctgttttgattgggtttgggtatgggtttgggttttcccc 6482053  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
     |||| |||| |||||||||||||| |||| | ||||||| |||||||||||||||||||| || || ||||||| |||||| ||||    
T  6482054 aatttaaaaacacgggtatgggacgagtaaagggtatatatgtacccaccccgaacccatacccaaacccgtcccaaatgcaaaaaa 6482140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 260 - 373
Target Start/End: Original strand, 1724307 - 1724420
Alignment:
Q  260 ggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaa 359  Q
    |||||| ||||| ||||| |||||||| |||| | |||||||||||||||||||  ||||||||||||||||||||||||||| || || ||||||| ||    
T  1724307 ggtatgggtttgggttttccccgatttcaaaacatgggtatgggacgggtaacggttatataggtacccaccccgaacccatacccaaacccgtcccgaa 1724406  T
Q  360 tgcagaaaactact 373  Q
    ||||||||||||||    
T  1724407 tgcagaaaactact 1724420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 211 - 338
Target Start/End: Original strand, 19883004 - 19883131
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    |||||||||||   |||||||||||||||||||| ||||| |||||||  ||||||||||| ||||| ||||||||||||| |||| || |||| |||||    
T  19883004 cccgaaccaaacccaatttgacgggtttttcccgctttgattgggtttgagtatgagtttgggttttccccgattttaaaacacggatacgggaagggta 19883103  T
Q  311 acgagtatataggtacccaccccgaacc 338  Q
    ||| | ||||||||| ||||||||||||    
T  19883104 acggggatataggtatccaccccgaacc 19883131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 21956734 - 21956893
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||  | || || || ||||||||||||  |||||||| |||||||||| |||| | ||| ||| |||||||||||| |||||| |||    
T  21956734 caacaaaacccataccaacgggtacccgcccgaaccaaatcaaatttgacaggtttttcccattttaattggatttgggtatgagtttgggttttttccg 21956833  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||| ||||||| || | | |||||| | |||||||| |||||||||||||||||    
T  21956834 attttaaaacacgggtacggaatgagtaacggggatataggtgcccaccccgaacccata 21956893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 299
Target Start/End: Complemental strand, 37349288 - 37349171
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   |||||||| |||||| |||||||||||||||||| |||||||||||||||||| |||    
T  37349288 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacaggttttccccgttttgactgggtttgggtatgagtttgagttttcccc 37349189  T
Q  282 gattttaaaaaacgggta 299  Q
    ||||| |||| |||||||    
T  37349188 gatttcaaaacacgggta 37349171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 201 - 333
Target Start/End: Complemental strand, 39375435 - 39375303
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| || ||||||||||||  ||||||||||||||||||  ||||||||| |||| | ||||||||||  |||| |||||||| |||| ||||||||    
T  39375435 tggttacccgcccgaaccaaattcaatttgacgggtttttcctattttgactgagtttggatatgagtttggcttttccccgatttcaaaatacgggtat 39375336  T
Q  301 gggacgggtaacgagtatataggtacccacccc 333  Q
     |||||||||||| |||||||| || |||||||    
T  39375335 aggacgggtaacgggtatatagatatccacccc 39375303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 3737908 - 3737792
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| ||||| ||| ||||||| ||||||||| || ||| | ||||||||| |||| |||| |||||||||||||||||||||||  |||| |||    
T  3737908 atttgacggattttttccgctttgacttggtttaggtgtgggttagggtttttcccaatttcaaaacacgggtatgggacgggtaacgaggttatatgta 3737809  T
Q  326 cccaccccgaacccata 342  Q
    |||| ||||||||||||    
T  3737808 cccatcccgaacccata 3737792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 202 - 342
Target Start/End: Complemental strand, 42299944 - 42299806
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| ||| ||||||||||   |||||||||||||||| ||| |||||||| ||||||||||| || ||  |||| |||||||| |||| || |||||     
T  42299944 ggttacccatccgaaccaaactcaatttgacgggttttttccggtttgactgagtttaggtatgggtatggattttccccgatttcaaaacac-ggtat- 42299847  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||| |||||||||||||||||| |||||||||    
T  42299846 ggacgggtaacgggtatataggtacccaccctgaacccata 42299806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 4741137 - 4741295
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| |||||||  || || ||  |||||||||| |||| |||||  ||||| ||||||| ||||| |||| | |||||||||||||||| | ||    
T  4741137 caacaaaactcatacatgcgggtatccgtccgaaccaaacataaattgacaagttttccccgttt-gactgagtttggatatgagtttgagttttcctcg 4741235  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||| | ||||||||||||| ||||  | ||||| ||||||||||||||||||||    
T  4741236 attttaaaacatgggtatgggacggataacagggatataagtacccaccccgaacccata 4741295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 226 - 361
Target Start/End: Complemental strand, 10302216 - 10302081
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||| ||||||| |||||||||| ||||||| |||||| ||||  ||||| |||||||| |||  ||||||||| ||||||||||| |  |||| |||    
T  10302216 atttgatgggttttccccgttttgattgggtttgggtatgggtttaggttttccccgatttcaaagtacgggtatgagacgggtaacggggttatatgta 10302117  T
Q  326 cccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||||||||||||||||| ||  ||||||||| ||||    
T  10302116 cccaccccgaacccatacccatatccgtcccaaatg 10302081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 313
Target Start/End: Complemental strand, 43309614 - 43309528
Alignment:
Q  227 tttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    |||||||||||||  ||| |||||||||||||  ||||||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  43309614 tttgacgggttttctccgctttgactgggtttgagtatgagtttgggtttttcccgatttcaaaacacgggtatgggacgggtaacg 43309528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 36919269 - 36919139
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||   ||||||||||||||||| || ||| ||||||||| |||||||||||||||||| ||||| ||||||| | | |||| ||||| ||||    
T  36919269 ccgaaccaaactcaatttgacgggtttttctcgctttaactgggtttgggtatgagtttgagttttccccgactttaaaacatgtgtataggacgagtaa 36919170  T
Q  312 cgagtatataggtacccaccccgaacccata 342  Q
    || | ||||||||| ||| ||  ||||||||    
T  36919169 cgtggatataggtatccatccttaacccata 36919139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 332
Target Start/End: Original strand, 8843725 - 8843874
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| |||||||  || ||  || |||||||||||  ||||||||||||||| |  | ||||||||||||| | |||| |||||| |||||||||    
T  8843725 caacaaaactcatacatgcgggtattcatccgaaccaaattaaatttgacgggttttccgtgctttgactgggtttggatatgtgtttgaatttttcccg 8843824  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccc 332  Q
    ||||||||| || |||  |||||||||| || | |||||| |||||||||    
T  8843825 attttaaaacacaggtgcgggacgggtagcggggatatagatacccaccc 8843874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 332
Target Start/End: Original strand, 8856689 - 8856838
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| |||||||  || ||  || |||||||||||  ||||||||||||||| |  | ||||||||||||| | |||| |||||| |||||||||    
T  8856689 caacaaaactcatacatgcgggtattcatccgaaccaaattaaatttgacgggttttccgtgctttgactgggtttggatatgtgtttgaatttttcccg 8856788  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccc 332  Q
    ||||||||| || |||  |||||||||| || | |||||| |||||||||    
T  8856789 attttaaaacacaggtgcgggacgggtagcggggatatagatacccaccc 8856838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 361
Target Start/End: Complemental strand, 32585616 - 32585486
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||| |||||| ||| |||||||||||||| ||||||| |||      |  ||||||| |||| ||||||||||||| ||||||| ||||||||||    
T  32585616 aatttgaccggttttcccctttttgactgggtttgggtatgaattt------tctccgatttcaaaacacgggtatgggacaggtaacgggtatataggt 32585523  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatg 361  Q
    |||||||| ||||||||| || || ||||||| ||||    
T  32585522 acccaccctgaacccatacccaaacccgtcccaaatg 32585486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 48459614 - 48459497
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||| ||||||||||| |||||| ||| |||  |||||  | || ||||| |||||||| |||| | |||||||| |||||||||  ||||||||||    
T  48459614 aatttgatgggtttttcccattttgattggatttgagtatggatatgggttttccccgatttcaaaacatgggtatggaacgggtaacaggtatataggt 48459515  T
Q  325 acccaccccgaacccata 342  Q
    ||||||||||||||||||    
T  48459514 acccaccccgaacccata 48459497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 1866512 - 1866628
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| |||| |||| ||||||| ||| | ||||||||| || |||||||||||||| |||| ||||||| | ||||||||| | | ||||| |||    
T  1866512 atttgacggattttccccgatttgactaggtctgggtatgagtatgggtttttcccgatttcaaaatacgggtacgagacgggtaatgcggatatatgta 1866611  T
Q  326 cccaccccgaacccata 342  Q
     ||||||||||||||||    
T  1866612 tccaccccgaacccata 1866628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 47239396 - 47239464
Alignment:
Q  274 tttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||||||||||| ||||||||||||||||||||| |||||||||| ||||||| |||||||||    
T  47239396 ttttttccgattttaaaacacgggtatgggacgggtaacgggtatataggttcccaccctgaacccata 47239464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 226 - 340
Target Start/End: Original strand, 31415894 - 31416008
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||| ||||||||| |||| ||||||||||||||||||| ||||||  ||||  ||||||| |||| ||||||| |||| || ||||  | ||||| |||    
T  31415894 atttaacgggttttccccgatttgactgggtttaggtataagtttggattttctccgatttcaaaatacgggtacgggatggataacagggatatatgta 31415993  T
Q  326 cccaccccgaaccca 340  Q
    |||||||||||||||    
T  31415994 cccaccccgaaccca 31416008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 373
Target Start/End: Original strand, 12825462 - 12825571
Alignment:
Q  264 tgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgca 363  Q
    |||||||| ||||| |||||||| |||| |||||||||||||||||||||  |||||| |||||||||| ||||| ||| || || | ||||| | ||||    
T  12825462 tgagtttgggttttccccgatttcaaaacacgggtatgggacgggtaacggatatatacgtacccaccctgaacctatacccaaacctgtcccgagtgca 12825561  T
Q  364 gaaaactact 373  Q
    ||||| ||||    
T  12825562 gaaaattact 12825571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 233 - 342
Target Start/End: Complemental strand, 25941263 - 25941154
Alignment:
Q  233 gggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccc 332  Q
    ||||||| |||  ||||| | ||||| || ||| ||||| |||||||||||||| |||| ||||||| ||||| ||||||| | | ||||||||||||||    
T  25941263 gggttttccccactttgatttggtttgggcatgtgtttgggtttttcccgatttcaaaacacgggtacgggacaggtaacgggaagataggtacccaccc 25941164  T
Q  333 cgaacccata 342  Q
    ||||||||||    
T  25941163 cgaacccata 25941154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 47103855 - 47103754
Alignment:
Q  241 cccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaaccca 340  Q
    |||| |||||||||||||  ||||| ||||| ||||| ||| |||| |||| ||||||| ||| ||||||||| | ||||| ||||||||||||||||||    
T  47103855 cccgatttgactgggtttttgtatgggtttgggttttccccaatttcaaaatacgggtacggggcgggtaacgcggatatatgtacccaccccgaaccca 47103756  T
Q  341 ta 342  Q
    ||    
T  47103755 ta 47103754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 258
Target Start/End: Original strand, 53906257 - 53906333
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggttt 258  Q
    ||||||||||||||||  | ||||| || |||||||||||   ||||||||||||||||||||||||||||||||||    
T  53906257 gcaacaaaacccatacccacggttatccgcccgaaccaaacccaatttgacgggtttttcccgttttgactgggttt 53906333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 325
Target Start/End: Original strand, 7334116 - 7334258
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||| |  || || || || ||||||||  ||||||||||||||||||||| ||||||||||||| ||||||  ||||  |||| |||    
T  7334116 gcaacaaaacccatacttgcgggtatccgcctgaaccaaacctaatttgacgggtttttcccgctttgactgggtttgggtatggatttggattttcccc 7334215  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||| |||| || |||| ||||||| ||| | | |||||||||    
T  7334216 gatttcaaaacac-ggtacgggacggataatggggatataggta 7334258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 208 - 302
Target Start/End: Original strand, 1724215 - 1724308
Alignment:
Q  208 ccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgg 302  Q
    ||||||||||||||   ||||||||| ||||| ||||||| |||||||||| |||||| ||||| |||||||||||||| |||| | ||||||||    
T  1724215 ccacccgaaccaaactcaatttgacgtgttttccccgttt-gactgggtttgggtatgggtttgggtttttcccgatttcaaaacatgggtatgg 1724308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 299
Target Start/End: Original strand, 12505479 - 12505577
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggttta-ggtatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    ||||| || |||||||||||| ||| ||||||||||||  ||| ||||| |||||||| |||||||||||| ||||| |||||||| |||| |||||||    
T  12505479 ggttaccctcccgaaccaaatttaaattgacgggttttctccgctttgattgggtttagggtatgagtttgggttttccccgatttcaaaacacgggta 12505577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 215 - 368
Target Start/End: Complemental strand, 19534592 - 19534445
Alignment:
Q  215 aaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacga 314  Q
    ||||||||  |||||||||||||||  ||||||| | ||||||| |||||||||||      |  ||||||||||||   ||||||||||||||||||      
T  19534592 aaccaaatccaatttgacgggttttctccgttttcattgggtttgggtatgagttt------tctccgattttaaaatctgggtatgggacgggtaacag 19534499  T
Q  315 gtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    ||||||||||||||||| ||||| |||| || || ||||| | |||| ||||||    
T  19534498 gtatataggtacccacctcgaactcatacccaaacccgtcacgaatgtagaaaa 19534445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 368
Target Start/End: Complemental strand, 9230373 - 9230272
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    ||||| ||||||||| | |||| || |||||||| |||||| ||||||||||||||||| ||| ||| ||| |||| || || ||||||| |||||||||    
T  9230373 gtttgggtttttcccaaatttataacacgggtataggacggataacgagtatataggtatccatcccaaactcataaccaaacccgtcccgaatgcagaa 9230274  T
Q  367 aa 368  Q
    ||    
T  9230273 aa 9230272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 14605908 - 14606004
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||| |||| |||||| ||||| |||||  ||||||| |||| ||||||| | ||||||||||  | ||||| ||||||||||||||||||||    
T  14605908 tttgactgagtttgggtatgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccata 14606004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 337
Target Start/End: Original strand, 9929150 - 9929241
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaac 337  Q
    ||||||| | ||| |||||| || ||||||||||| ||||| |||| |||||||| | |||||||||  | |||||||||||||||||||||    
T  9929150 tttgactagatttgggtatgggtatgagtttttcctgatttcaaaatacgggtatagtacgggtaacatggatataggtacccaccccgaac 9929241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 342
Target Start/End: Complemental strand, 29527903 - 29527828
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||| |||||||| |||| ||||||| | ||||||||||| | ||||| ||||||||||||||||||||    
T  29527903 gtttgggttttccccgatttcaaaatacgggtacgtgacgggtaacggggatatatgtacccaccccgaacccata 29527828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 226 - 329
Target Start/End: Original strand, 41914959 - 41915062
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||| || |||| |||| ||||||||||||  |||||||||||| ||||| |||||||| |||| | ||||| |||| |||||||| | ||||| |||    
T  41914959 atttgatggattttccccgatttgactgggttcgggtatgagtttgggttttccccgatttcaaaatatgggtacgggaagggtaacggggatatatgta 41915058  T
Q  326 ccca 329  Q
    ||||    
T  41915059 ccca 41915062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 368
Target Start/End: Original strand, 7985087 - 7985226
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| |  ||||||| ||||||| ||||| ||||||  ||||  ||||||| |||| | ||||||||||||| ||||    || || ||    
T  7985087 aatttgacgggttttcctggttttgattgggtttgggtataagtttggattttctccgatttcaaaacatgggtatgggacggataac----atgtatgt 7985182  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    || || |||||||||||| || || ||||||| |||||||||||    
T  7985183 actcatcccgaacccatacccaaacccgtcccgaatgcagaaaa 7985226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 30673094 - 30673012
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgg 307  Q
    ||||||||||||||| || | ||||| ||||||| ||||||||||||  ||||  |||||||||||| ||||||| |||||||    
T  30673094 aatttgacgggttttccctgatttgattgggtttgggtatgagtttggattttctccgattttaaaatacgggtacgggacgg 30673012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 273 - 331
Target Start/End: Original strand, 32596194 - 32596252
Alignment:
Q  273 gtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccacc 331  Q
    ||||| |||||||| |||| ||||||||||||||||||||| |||||||||| ||||||    
T  32596194 gttttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtccccacc 32596252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 329
Target Start/End: Original strand, 33615318 - 33615395
Alignment:
Q  252 tgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtaccca 329  Q
    ||||||| |||||| |||| |||||| | |||||| | ||||| |||||||||||||||||| | |||||||||||||    
T  33615318 tgggtttgggtatgggtttaagttttcctcgatttaataaaacaggtatgggacgggtaacggggatataggtaccca 33615395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 39047085 - 39046968
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||| |||||||  ||||||||||||  |||  ||||| || || ||||| ||| ||||  ||| |||||||||||||  |||||| ||||||||||    
T  39047085 aatttgatgggttttctccgttttgactgaatttgagtatgggtatgggttttccccaatttccaaacacgggtatgggacatgtaacgggtatataggt 39046986  T
Q  325 acccaccccgaacccata 342  Q
    |||||| || ||||||||    
T  39046985 acccactccaaacccata 39046968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 21544663 - 21544595
Alignment:
Q  274 tttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||||| |||| ||||||| ||||| ||||| | | ||||| ||||||||||||||||||||    
T  21544663 tttttcccgatttcaaaatacgggtacgggacaggtaatggggatatatgtacccaccccgaacccata 21544595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 299
Target Start/End: Original strand, 12075594 - 12075667
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    |||||||||||||||||| | |||||  |||||| ||||||||||||||||||| || |||| |||| |||||||    
T  12075594 aatttgacgggtttttcc-gctttgatcgggtttgggtatgagtttgagttttttccaatttcaaaacacgggta 12075667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 326
Target Start/End: Original strand, 25265126 - 25265227
Alignment:
Q  224 taatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatatagg 323  Q
    ||||||||||||||||| ||| |||||||| |||| |||||| | ||| ||||| ||||||||||||| | ||||| ||||  ||||||| | || ||||    
T  25265126 taatttgacgggttttttccgctttgactgcgtttgggtatg-gcttgggttttccccgattttaaaacatgggtacgggataggtaacgtggatgtagg 25265224  T
Q  324 tac 326  Q
    |||    
T  25265225 tac 25265227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 327
Target Start/End: Complemental strand, 39086290 - 39086188
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||| ||||  ||||||||| ||||||| | ||||||||||||||||  ||||||| | || | ||||  || |||||||||| | ||||||||    
T  39086290 aatttgacggattttctccgttttgattgggtttggatatgagtttgagttttctccgatttcacaacatgggtgcggtacgggtaacggggatataggt 39086191  T
Q  325 acc 327  Q
    |||    
T  39086190 acc 39086188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 345
Target Start/End: Original strand, 43351376 - 43351457
Alignment:
Q  264 tgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaac-gagtatataggtacccaccccgaacccatatcc 345  Q
    |||||||||||||||  ||||||||||| ||| || ||||||| ||||| ||| |||||| |||| |||||||||||||||||    
T  43351376 tgagtttgagtttttttcgattttaaaatacgagtttgggacgagtaacagag-atatagatacctaccccgaacccatatcc 43351457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 18423722 - 18423606
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||| |||||| |||  ||||| |||||||  |||| |||| | |||||| || |||| | || |||| || ||||||||||||||| ||||| |||    
T  18423722 atttgacaggttttcccctatttgattgggtttgagtataagttcgggttttttccaatttcataatacggatacgggacgggtaacgaggatatatgta 18423623  T
Q  326 cccaccccgaacccata 342  Q
    | || ||||||||||||    
T  18423622 ctcatcccgaacccata 18423606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 19548858 - 19548985
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| ||||| ||||| || | ||||||||||||   |||||||| |||||| |||  ||||||||||||| ||||||  |  | ||||| ||||    
T  19548858 caacaaaactcatacctatgggtacctacccgaaccaaacccaatttgac-ggttttcccctctttgactgggtttgggtatggataagggttttccccg 19548956  T
Q  283 attttaaaaaacgggtatgggacgggtaa 311  Q
    |||| |||| || |||| |||||||||||    
T  19548957 atttcaaaacacaggtacgggacgggtaa 19548985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 45065381 - 45065265
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||| ||||| |||  ||||||||||||| |||||  ||||  ||||| | |||||| |||| ||||||| |||||| |||||  | ||||| |||    
T  45065381 atttgacgagttttccccaatttgactgggtttgggtataggtttaggttttcctcgatttcaaaatacgggtacgggacgagtaacagggatatatgta 45065282  T
Q  326 cccaccccgaacccata 342  Q
    |||| ||||||| ||||    
T  45065281 cccatcccgaacgcata 45065265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 53906346 - 53906386
Alignment:
Q  304 acgggtaacgagtatataggtacccaccccgaacccatatc 344  Q
    |||||||||  ||||||||||||||||||||||||||||||    
T  53906346 acgggtaacaggtatataggtacccaccccgaacccatatc 53906386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 345
Target Start/End: Original strand, 29035495 - 29035614
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||| |||| |||||||||||||||| ||||  ||||| ||||| | ||| | | ||||||||| || |||| ||||||| ||| ||  ||||| |||    
T  29035495 atttgatgggtatttcccgttttgactgtgtttcagtatgggtttgggctttcctcaattttaaaacaccggtacgggacggataatgaagatataagta 29035594  T
Q  326 cccaccccgaacccatatcc 345  Q
    || ||| ||||| |||||||    
T  29035595 ccaacctcgaactcatatcc 29035614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 226 - 345
Target Start/End: Original strand, 29047628 - 29047747
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||| |||| |||||||||||||||| ||||  ||||| ||||| | ||| | | ||||||||| || |||| ||||||| ||| ||  ||||| |||    
T  29047628 atttgatgggtatttcccgttttgactgtgtttcagtatgggtttgggctttcctcaattttaaaacaccggtacgggacggataatgaagatataagta 29047727  T
Q  326 cccaccccgaacccatatcc 345  Q
    || ||| ||||| |||||||    
T  29047728 ccaacctcgaactcatatcc 29047747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 250 - 368
Target Start/End: Complemental strand, 42907994 - 42907876
Alignment:
Q  250 actgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaat 349  Q
    ||||| ||| ||||||| | ||||||||  |||| || |||| |||| || |||||| |||| | | ||||||||||||||||||| |||||| || ||     
T  42907994 actggatttgggtatgattatgagttttctccgaattcaaaacacggatacgggacgagtaatggggatataggtacccaccccgagcccatacccaaac 42907895  T
Q  350 ccgtccccaatgcagaaaa 368  Q
     |||||| |||| ||||||    
T  42907894 tcgtcccgaatgtagaaaa 42907876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 368
Target Start/End: Complemental strand, 37349166 - 37349113
Alignment:
Q  315 gtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    ||||||||||| |||||| ||||||||| || || ||||||| |||||||||||    
T  37349166 gtatataggtatccaccctgaacccatacccaaacccgtcccgaatgcagaaaa 37349113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 30266341 - 30266409
Alignment:
Q  274 tttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||||| | || |||||||  |||||||||||| | ||||| ||| ||||||||||||||||    
T  30266341 ttttttccgatttcataatacgggtacaggacgggtaacggggatatatgtatccaccccgaacccata 30266409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 30285847 - 30285779
Alignment:
Q  274 tttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||||| | || |||||||  |||||||||||| | ||||| ||| ||||||||||||||||    
T  30285847 ttttttccgatttcataatacgggtacaggacgggtaacggggatatatgtatccaccccgaacccata 30285779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 50684579 - 50684483
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||||||  ||||||| ||| ||||  ||||||||||||| |||| || |||||||||||||   |||||| |||||| || |||| ||||    
T  50684579 tttgagtgggtttgagtatgagcttgggtttaccccgattttaaaatacggatacgggacgggtaacggagatatagatacccatccggaactcata 50684483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 19572430 - 19572590
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||| | |||||| || |||||||||||  |||||||||||||||| ||| |||||||||||||| |||||| || || |||||||||    
T  19572430 gcaacaaaacccatacttgtggttacccgcccgaaccaaacctaatttgacgggttttccccattttgactgggtttgggtatgggtatgggtttttccc 19572529  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  19572530 gatttcaaaacacgggtatgggacaggtaacgggtatataggtacccaccccgaacccata 19572590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 182 - 371
Target Start/End: Original strand, 23490689 - 23490878
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||  || |||| || ||||||||||||  |||||||||||||||||| ||||||||||||||| |||||| || || ||||| |||    
T  23490689 gcaacaaaacccatactcatagttacccgcccgaaccaaatccaatttgacgggtttttcctgttttgactgggtttgggtatgggtatgggttttcccc 23490788  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaacta 371  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |  || ||||||| |||| | |||||||    
T  23490789 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccaaaacccgtcccaaatgtaaaaaacta 23490878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 24236679 - 24236839
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| |||||  ||||||| || |||||||||||   ||||||||||||||||||||||||||||||||||||||||| || || ||||| |||    
T  24236679 gcaacaaaactcatacccatggttacccgcccgaaccaaactcaatttgacgggtttttcccgttttgactgggtttaggtatgggtatgggttttcccc 24236778  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||| | |||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||    
T  24236779 gatctcaaaacacgggtatggaacggggaacgggtatataggtacccaccccgaacccata 24236839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 183 - 373
Target Start/End: Complemental strand, 12495180 - 12494990
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||  ||||||| |||||| ||||| |||||||||  |||||||||| |||| |||  ||||||||||||| |||||| ||||  ||||||||||    
T  12495180 caacaaaattcatacatgtggttacccacctgaaccaaatccaatttgacggattttccccactttgactgggtttcggtatgggttttggtttttcccg 12495081  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||| |||| |||| ||||||||| |||||| ||||||||||||||||| |||||||||| || || ||||||| |||| |||||||||||    
T  12495080 atttcaaaacacggatatgggacgtgtaacgggtatataggtacccacctcgaacccatacccaaacccgtcccaaatgtagaaaactact 12494990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 356
Target Start/End: Original strand, 44615393 - 44615567
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||||||  ||||||   |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||     
T  44615393 gcaacaaaacccatacccgtggttacccacccagaccaaactcaatttgacgggtttttcccgttttgactgggtttgggtatgagtttgggttttccct 44615492  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccc 356  Q
    ||||| |||| ||||||||||||||||||||  ||||||||||||||||||| ||| |||| || || |||||||    
T  44615493 gatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaacccgtccc 44615567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 356
Target Start/End: Complemental strand, 44793176 - 44793002
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||||||  ||||||   |||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||     
T  44793176 gcaacaaaacccatacccgtggttacccacccagaccaaactcaatttgacgggtttttcccgttttgactgggtttgggtatgagtttgggttttccct 44793077  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccc 356  Q
    ||||| |||| ||||||||||||||||||||  ||||||||||||||||||| ||| |||| || || |||||||    
T  44793076 gatttaaaaacacgggtatgggacgggtaacaggtatataggtacccaccccaaactcatacccaaacccgtccc 44793002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 5181210 - 5181050
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || ||||||||||||  ||||||||||||||| ||| ||||||||||||||||||||| || || ||||| |||    
T  5181210 gcaacaaaacccatacccgcggttacccgcccgaaccaaattcaatttgacgggttttccccattttgactgggtttaggtatgggtatgggttttcccc 5181111  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||    
T  5181110 gatttcaaaatacgggtatgggacgggtaacgggtatataggcacccaccccaaacccata 5181050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 9982808 - 9982999
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| |||||   ||||||  | ||||||||||||  ||||||| || ||||  ||||||||||||||||| ||||||||||||| |||| |||    
T  9982808 gcaacaaaactcatacccgtggttactctcccgaaccaaatccaatttgatggattttctccgttttgactgggtttgggtatgagtttgaattttcccc 9982907  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
     |||| |||| ||||| |||||| ||||||||||||||||||||||||||||||||||||| || || || |||| ||||||||||| ||||    
T  9982908 aatttcaaaacacgggaatgggatgggtaacgagtatataggtacccaccccgaacccatacccaaacccatcccgaatgcagaaaattact 9982999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 201 - 373
Target Start/End: Original strand, 49250710 - 49250882
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| || ||||||||||||  |||||||||||||||  ||||||||||||||||| |||||| || |||||||| |||||| | |||| ||||||||    
T  49250710 tggttatccgcccgaaccaaattcaatttgacgggttttctccgttttgactgggtttgggtatgggtatgagttttccccgatctcaaaacacgggtat 49250809  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||||||||| | ||||||||||| ||||| |||||||||| || || ||||||| |||| | |||||||||    
T  49250810 gggacgggtaatgggtatataggtatccacctcgaacccatacccaaacccgtcccaaatgtaaaaaactact 49250882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 36187138 - 36187317
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   | |||| || |||||||||||   |||||| |||||||| |||||||||||||||||| |||||| || || ||||| |||    
T  36187138 gcaacaaaacccatacccgtcgttacccgcccgaaccaaactcaatttggcgggttttccccgttttgactgggtttgggtatgggtatgggttttcccc 36187237  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||||||||||||||||||||| |||||||||||||||||| ||||||||| || || ||||||| ||||    
T  36187238 gatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaacccatacccaaacccgtcccaaatg 36187317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 329
Target Start/End: Complemental strand, 24711017 - 24710871
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||| ||   || ||| |||||||||||||||  ||||||||||||||| |||||||||||||||||| | ||||||| || ||||| ||||    
T  24711017 caacaaaacccacacccgtgattatccacccgaaccaaattcaatttgacgggttttccccgttttgactgggtttggatatgagtatgggttttccccg 24710918  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtaccca 329  Q
    || | |||| ||||||||||||||||||||| |||||||||||||||    
T  24710917 atctcaaaacacgggtatgggacgggtaacgggtatataggtaccca 24710871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 201 - 375
Target Start/End: Complemental strand, 51422010 - 51421836
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| || |||||||||||   ||||||| ||||||| ||| |||||||||||||| |||||| || || |||||||||||| | |||| ||||||||    
T  51422010 tggttacccgcccgaaccaaacccaatttgatgggttttccccattttgactgggtttgggtatgggtatgggtttttcccgatctcaaaacacgggtat 51421911  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactactct 375  Q
    ||||||||||||  ||||||| |||||||||||||||||||| || || ||||||| |||| | |||| ||||||    
T  51421910 gggacgggtaacatgtatatatgtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaattactct 51421836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 10778528 - 10778645
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||||||||| ||| ||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||||||||||||||||| |  ||||| |    
T  10778528 aatttgacgggttttttccgctttgactgggtttgggtatgagtttaagtttttcccgatttcaaaacacgggtatgggacgggtaacggggttatagat 10778627  T
Q  325 acccaccccgaacccata 342  Q
    | ||||||||||||||||    
T  10778628 atccaccccgaacccata 10778645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 16409111 - 16408953
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||| | ||||| || | |||| ||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||     
T  16409111 caacaaaacccatacacacggttaccc-ctcgaatcaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttcccca 16409013  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||| ||||||||||||||||||||  ||||||||||||| ||||||||||||||    
T  16409012 atttcaaaacacgggtatgggacgggtaacaggtatataggtaccgaccccgaacccata 16408953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 183 - 361
Target Start/End: Complemental strand, 29936592 - 29936408
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagt------tt 276  Q
    |||||||||||||||   |||||| || |||||||||||   ||||||||||||||| ||||||||||||  |||| ||||||||| || ||      ||    
T  29936592 caacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactaagtttgggtatgagtatgggtatgggttt 29936493  T
Q  277 ttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    | |||||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| ||||    
T  29936492 tccccgatctcaaaatacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 29936408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 183 - 361
Target Start/End: Complemental strand, 34611243 - 34611065
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||| ||||||   |||||| || || |||||||||  ||||||||||||||| |||||||||| ||  ||| |||||| || || ||||||||||    
T  34611243 caacaaaatccatacccgtggttacccgcctgaaccaaatccaatttgacgggttttccccgttttgattgaatttgggtatgggtatgggtttttcccg 34611144  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    || | |||| |||||||||||||  |||||| |||||||||||| ||||||||||||||| || || ||||||| ||||    
T  34611143 atctcaaaacacgggtatgggacatgtaacgtgtatataggtactcaccccgaacccatacccaaacccgtcccaaatg 34611065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 42707755 - 42707914
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||    |||||| ||  || ||| |||| ||||||||||| |||||||| |||||||||||||| ||||||||| ||||||||  ||    
T  42707755 gcaacaaaacccataatcgtggttatccgtccaaactaaatttaatttgacggatttttcccattttgactgggtttgggtatgagtatgagttttctcc 42707854  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| ||||||||||||||||||||| | ||||| |||| || ||||||||||||    
T  42707855 gatttcaaaacacgggtatgggacgggtaacgggaatataagtactca-cccgaacccata 42707914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 211 - 338
Target Start/End: Original strand, 18354027 - 18354154
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |||   |||| || || ||||| |||||||| |||| | ||||||||||||||||    
T  18354027 cccgaaccaaattcaatttgacgggtttttcccgttttgactggatttgaatatgggtatgggttttccccgatttcaaaacatgggtatgggacgggta 18354126  T
Q  311 acgagtatataggtacccaccccgaacc 338  Q
    ||| ||||||| || |||||||||||||    
T  18354127 acgggtatataagttcccaccccgaacc 18354154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 34673229 - 34673360
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    |||||||||||   ||||| |||| |||| ||| |||| ||||||||| |||||| ||||| ||||||||| |||| |||| ||||||||| ||| ||||    
T  34673229 cccgaaccaaacccaatttaacggattttccccattttaactgggtttgggtatgggtttgggtttttcccaatttcaaaacacgggtatgagactggta 34673328  T
Q  311 acgagtatataggtacccaccccgaacccata 342  Q
    ||| ||||||||||||||||||||||||||||    
T  34673329 acgggtatataggtacccaccccgaacccata 34673360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 212 - 339
Target Start/End: Original strand, 35936777 - 35936904
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    |||||||||||  ||| ||||||||||||| | |||||||| ||||| |||||||||||| ||||| |||||||| |||  ||| ||||||||||| |||    
T  35936777 ccgaaccaaattcaatctgacgggtttttctcattttgacttggtttgggtatgagtttgggttttccccgatttcaaatcacgagtatgggacggataa 35936876  T
Q  312 cgagtatataggtacccaccccgaaccc 339  Q
    || ||||||||||||||||||| |||||    
T  35936877 cgggtatataggtacccaccccaaaccc 35936904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 17135118 - 17134958
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || |||||||||||   |||||||||| ||||  | ||||||||||||||| ||| || || || ||||| |||    
T  17135118 gcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttctctgttttgactgggtttgggtgtgggtatgggttttcccc 17135019  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| ||||||||| ||||||||||| |||||||||||||  |||||||||||||    
T  17135018 gatttcaaaacacgggtatgagacgggtaacgggtatataggtaccatccccgaacccata 17134958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 225 - 368
Target Start/End: Original strand, 29871246 - 29871389
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| | ||||||||||  |||| |||||||||||| |||||  ||||||| |||| | ||||||||||| ||||||  ||||||||||    
T  29871246 aatttgacgggttttcctcgttttgactaagtttgggtatgagtttgggttttctccgatttcaaaacatgggtatgggacaggtaactggtatataggt 29871345  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    |||||||| |||| |||| || || ||||||| |||| ||||||    
T  29871346 acccaccctgaactcatacccaaacccgtcccgaatgtagaaaa 29871389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 201 - 345
Target Start/End: Original strand, 42439607 - 42439751
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| || |||||||||||   ||||||||   ||||| || ||||||||| |||| |||||| || ||| ||||| ||||| | |||| | ||||||    
T  42439607 tggttatccgcccgaaccaaactcaatttgacaaattttttccattttgactgagtttgggtatgggtatgaattttttccgatctcaaaacatgggtat 42439706  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcc 345  Q
    |||||| |||||| |||||||||||||||||||||||||||||||    
T  42439707 gggacgagtaacgggtatataggtacccaccccgaacccatatcc 42439751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 227 - 342
Target Start/End: Complemental strand, 34085361 - 34085246
Alignment:
Q  227 tttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtac 326  Q
    |||||||||||||  ||| ||||||||||||  | |||||||||| |||||||||||||| |||| ||| |||||||| |||||||| |  |||| ||||    
T  34085361 tttgacgggttttctccgctttgactgggttaggatatgagtttgggtttttcccgatttcaaaacacgagtatgggatgggtaacggggttatatgtac 34085262  T
Q  327 ccaccccgaacccata 342  Q
    ||||||||||||||||    
T  34085261 ccaccccgaacccata 34085246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 202 - 329
Target Start/End: Complemental strand, 39616443 - 39616316
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   ||||||||| ||||| ||||||||||||| |||| ||||||||| || ||||| ||| |||| |||| ||||||||     
T  39616443 ggttacccgcccgaaccaaactcaatttgacgagttttccccgttttgactgagtttgggtatgagtatgggttttcccctatttcaaaacacgggtata 39616344  T
Q  302 ggacgggtaacgagtatataggtaccca 329  Q
    ||||||||||| |||||||||| |||||    
T  39616343 ggacgggtaacaagtatataggcaccca 39616316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 227 - 329
Target Start/End: Original strand, 33293494 - 33293596
Alignment:
Q  227 tttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtac 326  Q
    |||||||  ||||| ||||||||| ||||||| |||||||||||| |||||||||||||| |||| ||||||||||||||||||| | | ||||||| ||    
T  33293494 tttgacgaattttttccgttttgattgggtttgggtatgagtttgggtttttcccgatttcaaaacacgggtatgggacgggtaatggggatataggaac 33293593  T
Q  327 cca 329  Q
    |||    
T  33293594 cca 33293596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 260 - 361
Target Start/End: Complemental strand, 28298027 - 28297926
Alignment:
Q  260 ggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaa 359  Q
    |||||| || |||||||| |||||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| ||    
T  28298027 ggtatgggtatgagttttccccgatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaa 28297928  T
Q  360 tg 361  Q
    ||    
T  28297927 tg 28297926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 13798366 - 13798270
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatata 321  Q
    ||||| ||||||||| |||| | ||||||||||| |||||||||||| |||||||||||||| |||| ||||||||| || |||||||||| |||||    
T  13798366 aatttaacgggttttccccggtatgactgggtttgggtatgagtttgggtttttcccgatttcaaaacacgggtatgagatgggtaacgaggatata 13798270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 214 - 342
Target Start/End: Original strand, 40087414 - 40087541
Alignment:
Q  214 gaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    |||||||||  |||||||||| |||| ||||||||||||| |||| |||||| || |||||||| ||||| || |||| || ||||||||| | ||||||    
T  40087414 gaaccaaattcaatttgacggattttccccgttttgactgagtttgggtatgggtatgagttttccccga-ttcaaaacacaggtatgggatgagtaacg 40087512  T
Q  314 agtatataggtacccaccccgaacccata 342  Q
     | ||||||||||||||||||||| ||||    
T  40087513 ggaatataggtacccaccccgaactcata 40087541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 45866104 - 45866263
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || ||||| |||||  ||| ||||||||||||  || |||||||| ||||| |||||| || || ||||| |||    
T  45866104 gcaacaaaacccatactcgcggttacccgcccgagccaaacctaaattgacgggttttctcc-ttttgactaggtttgggtatgggtatgggttttcccc 45866202  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| ||||||||| ||| ||||| ||||||||||||||||||||| ||| ||||    
T  45866203 gatttcaaaacacgggtatgagacaggtaatgagtatataggtacccaccccaaactcata 45866263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 3627916 - 3628063
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| ||||||   ||||| || |||||||||||   ||||||| | |||||||||||||||||||||| |||||            ||| ||||    
T  3627916 caacaaaactcatacacgcggttacccgcccgaaccaaactcaatttgatgagtttttcccgttttgactgggtataggt------------tttccccg 3628003  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||| ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  3628004 atttcaaaacacgggtatgggacgggtaacgggtatgtaggtacccaccccgaacccata 3628063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 342
Target Start/End: Original strand, 48125683 - 48125761
Alignment:
Q  264 tgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||  ||||||| |||||||||| ||||||| ||||||||||||||| ||||||||| ||||||||||||||||    
T  48125683 tgagtttggatttttcctgattttaaaacacgggtacgggacgggtaacgaggatataggtatccaccccgaacccata 48125761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 341
Target Start/End: Original strand, 17091939 - 17092036
Alignment:
Q  244 gttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccat 341  Q
    |||||||||| |||| | ||||||| |||||||| |||||||||| || || ||||||||||| |||||| ||||||||| || ||||||||||||||    
T  17091939 gttttgactgagtttggatatgagtatgagttttccccgattttataacacaggtatgggacgcgtaacgggtatataggcactcaccccgaacccat 17092036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 212 - 368
Target Start/End: Original strand, 41476900 - 41477056
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||  || ||||| |||||||||||| |||||||| ||||   |||||||||| ||||||  |||||  |||| ||| ||| ||||||| |||    
T  41476900 ccgaaccaaacctattttgatgggtttttcccgctttgactgagtttgaatatgagtttgggtttttttcgattggaaaatacgagtacgggacggataa 41476999  T
Q  312 cgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    || | ||||| |||||||||||||| ||||| || || ||||||| || ||||||||    
T  41477000 cgtggatatatgtacccaccccgaatccatacccaaacccgtcccgaaagcagaaaa 41477056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 226 - 339
Target Start/End: Original strand, 19003628 - 19003741
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||||||||| |||| ||||||| ||||| |||||| ||| | ||||| |||||||  |||| ||||||||||||||| ||||| | ||||| |||    
T  19003628 atttgacgggttttccccgatttgactaggtttgggtatgggttcgggttttccccgattacaaaatacgggtatgggacggataacggggatatatgta 19003727  T
Q  326 cccaccccgaaccc 339  Q
     ||||||| |||||    
T  19003728 tccaccccaaaccc 19003741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 182 - 311
Target Start/End: Complemental strand, 23968750 - 23968621
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || |||||||||||   |||||||||| |||| ||| |||||| ||||||| |||||| || || ||||| |||    
T  23968750 gcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttccccattttgattgggtttgggtatgggtatgggttttcccc 23968651  T
Q  282 gattttaaaaaacgggtatgggacgggtaa 311  Q
    | ||| |||| |||||||||||||||||||    
T  23968650 ggtttcaaaacacgggtatgggacgggtaa 23968621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 16237286 - 16237382
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||| |||| | ||||| |||| ||||| |||||||| |||| ||||||| ||||||||||||||| ||||| ||||  ||||||||||||||    
T  16237286 tttgactgagtttggatatgaatttgggttttccccgatttcaaaatacgggtaagggacgggtaacgaggatatatgtactaaccccgaacccata 16237382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 23058573 - 23058477
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||||  ||||| |||||||||||  ||||||| ||||  || ||| | ||||||||||| | ||||||||||||||||||||||||||    
T  23058573 tttgactgggtttgagtatgggtttgagttttctccgatttcaaaatgcgagtacgagacgggtaacggggatataggtacccaccccgaacccata 23058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 35069871 - 35069967
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||| ||| |||||||||||||||||| |||||||| | || |||||||   ||||||||||  | ||||| ||||||||||||||||||||    
T  35069871 tttgactggatttgggtatgagtttgagttttccccgatttcataatacgggtacaagacgggtaacagggatatatgtacccaccccgaacccata 35069967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 315 - 373
Target Start/End: Original strand, 49741058 - 49741116
Alignment:
Q  315 gtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||||||||||||||||||||||||||| || || ||||||| ||||||||||||||||    
T  49741058 gtatataggtacccaccccgaacccatacccaaacccgtcccgaatgcagaaaactact 49741116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 182 - 291
Target Start/End: Complemental strand, 13390567 - 13390459
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||  | ||||| || |||||||||||   ||||||||||||||  |||||||||||||||||| |||||| || ||| |||| |||    
T  13390567 gcaacaaaacccatacccacggttacccgcccgaaccaaacccaatttgacgggtttc-cccgttttgactgggtttgggtatgggtatgaattttcccc 13390469  T
Q  282 gattttaaaa 291  Q
    ||||| ||||    
T  13390468 gatttcaaaa 13390459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 267 - 373
Target Start/End: Original strand, 16433170 - 16433273
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    |||||||||||  ||||||| |||| |||||||||||||||||||||  |||||||||||   ||||||||||||| || || ||  ||| |||||||||    
T  16433170 gtttgagttttctccgatttcaaaacacgggtatgggacgggtaacggatatataggtac---ccccgaacccatacccaaacccaccccaaatgcagaa 16433266  T
Q  367 aactact 373  Q
    || ||||    
T  16433267 aattact 16433273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 245 - 332
Target Start/End: Complemental strand, 36617469 - 36617381
Alignment:
Q  245 ttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaa-acgggtatgggacgggtaacgagtatataggtacccaccc 332  Q
    |||||| ||||||||| |||||||||||||||| | |||||| ||||| | ||||| ||||||  ||||||| ||||||||||||||||    
T  36617469 ttttgattgggtttagatatgagtttgagttttccacgatttcaaaaacatgggtacgggacgaataacgagaatataggtacccaccc 36617381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 50426679 - 50426739
Alignment:
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| ||||||||| ||||| ||||| ||||||||||||||||||||||||||||    
T  50426679 gatttcaaaacacgggtatgagacggataacgggtatataggtacccaccccgaacccata 50426739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 20774737 - 20774654
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatg 265  Q
    ||||||||||||||||   |||||| || |||||||||||   |||||||||| |||| |||||||||||||||||| ||||||    
T  20774737 gcaacaaaacccatactcgtggttacccgcccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggtatg 20774654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 34060031 - 34060103
Alignment:
Q  270 tgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||| | |||||| |||| ||||||||| ||||| ||||  |||||||||||||||| |||||||||||    
T  34060031 tgagttttcctcgatttcaaaacacgggtatgagacggataacaggtatataggtacccactccgaacccata 34060103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 182 - 265
Target Start/End: Original strand, 34059066 - 34059149
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatg 265  Q
    ||||||||||||||||  | ||||| ||  |||||||||||  ||||||||||||| |||||||||||||| | ||| ||||||    
T  34059066 gcaacaaaacccatacccacggttatccgtccgaaccaaattcaatttgacgggttattcccgttttgactagatttgggtatg 34059149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 343
Target Start/End: Complemental strand, 38686751 - 38686672
Alignment:
Q  264 tgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatat 343  Q
    ||||||||  |||| ||||||||||||| ||||||||||||||  ||||  |  |||| |||||||||||||||||||||    
T  38686751 tgagtttggattttccccgattttaaaatacgggtatgggacgaataacatggttatatgtacccaccccgaacccatat 38686672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 213 - 361
Target Start/End: Complemental strand, 16903663 - 16903515
Alignment:
Q  213 cgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaac 312  Q
    ||||||||||  || ||||||| |||| | |  ||||| ||||||| || ||| ||||   |||||||| ||||||||| ||| ||| ||||  |||||     
T  16903663 cgaaccaaatccaagttgacggattttcctcactttgattgggtttgggcatgggtttagatttttcccaattttaaaacacgagtacgggataggtaat 16903564  T
Q  313 gagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    | | ||||||||||||||||||||| |||| || || ||||||| ||||    
T  16903563 ggggatataggtacccaccccgaactcatacccaaacccgtcccgaatg 16903515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 325
Target Start/End: Complemental strand, 27867331 - 27867231
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||  ||||||  ||||||||||||||||||  |||| ||| |||||||||| ||||| |||| | ||||| | |||| |||||||  ||||||||    
T  27867331 aatttgataggttttctccgttttgactgggtttaaatatgtgttcgagtttttcctgatttcaaaacatgggtacgagacgagtaacgaagatataggt 27867232  T
Q  325 a 325  Q
    |    
T  27867231 a 27867231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 342
Target Start/End: Complemental strand, 23966919 - 23966884
Alignment:
Q  307 ggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||| ||||||||||||||||||||||||||||    
T  23966919 ggtaacgggtatataggtacccaccccgaacccata 23966884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 342
Target Start/End: Complemental strand, 39219344 - 39219269
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||| ||||||||||||| ||||||| || ||  |||||| | ||| | ||||||||||||||||||||    
T  39219344 gtttgggttttccccgattttaaaacacgggtacggaacaagtaacggggatacatgtacccaccccgaacccata 39219269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 46740321 - 46740388
Alignment:
Q  233 gggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||||| ||||||||||||  |||  |||||||||||| ||||||| |||||||||| ||| ||||    
T  46740321 gggttttttccgttttgactgaatttgagtatgagtttgaatttttcctgattttaaaacacgagtat 46740388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 225 - 307
Target Start/End: Complemental strand, 13692757 - 13692675
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgg 307  Q
    ||||||| ||||||| |||| ||  | |||||||  |||||||||||||||||||||||||| | || | ||||| |||||||    
T  13692757 aatttgatgggttttacccgcttaaattgggtttgagtatgagtttgagtttttcccgatttcataacatgggtacgggacgg 13692675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 28298098 - 28298049
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttga 250  Q
    |||||| |||||||||||||||  ||||||||||||||| || |||||||    
T  28298098 tggttacccacccgaaccaaatccaatttgacgggttttccctgttttga 28298049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 2514883 - 2514811
Alignment:
Q  228 ttgacgggtttttcccgttttgactgggtttagg-tatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    |||| ||||||| |||||||||| ||||||| || |||||||||| ||||| ||| |||| |||| |||||||    
T  2514883 ttgatgggttttccccgttttgattgggtttggggtatgagtttgggttttccccaatttcaaaacacgggta 2514811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 2e-46; HSPs: 66)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 183 - 361
Target Start/End: Complemental strand, 30650805 - 30650627
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| |||||   |||||| || |||||||||||   ||||||||||||||| ||||||||||||||||||||||||| || |||||||| |||     
T  30650805 caacaaaactcatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttaggtatgggtatgagttttcccca 30650706  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    || | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||| ||||    
T  30650705 atctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatg 30650627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 21702834 - 21702643
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||    |||||| || |||||||||||   |||||||||| ||||||||||||||||||||||| ||||||||| || ||||| |||    
T  21702834 gcaacaaaacccatatccgtggttacccgcccgaaccaaacccaatttgacggatttttcccgttttgactgggtttgggtatgagtatgggttttcccc 21702735  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| |||| | |||||||||    
T  21702734 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccataccccaacccgtcccaaatgtaaaaaactact 21702643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 35074645 - 35074466
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   |||| |||||||||| |||||||||||||||||| |||||| || || ||||| |||    
T  35074645 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaattagacgggttttccccgttttgactgggtttgggtatgggtatgggttttcccc 35074546  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| |||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| || || ||||||| ||||    
T  35074545 gatcttaaaacacgggtatgggacgggtaacgggtatataggtacccaacccgaacccatacccaaacccgtcccaaatg 35074466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 211 - 373
Target Start/End: Original strand, 18125175 - 18125337
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||||  |||||||| || |||||||||||| |  ||| ||||||||||||||||||    
T  18125175 cccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgtgtatgagtatgggtttttcccgatctcgaaacacgggtatgggacgggta 18125274  T
Q  311 acgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| ||||||||||||||||||||||| |||| || || ||||||| |||| | |||||||||    
T  18125275 acgggtatataggtacccaccccgaacgcatacccaaacccgtcccaaatgtaaaaaactact 18125337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 10072641 - 10072481
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||    
T  10072641 gcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttcccc 10072542  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| |||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  10072541 gatttcaaaacacgggtatggaacgggtaacgggtatataggtacccaccccgaacccata 10072481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 214 - 373
Target Start/End: Complemental strand, 5377228 - 5377069
Alignment:
Q  214 gaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    ||||||||| |||||| |||| ||||||||||||||| |||| ||  ||||||||||| ||||| |||||||| |||| || |||||||||||||||| |    
T  5377228 gaaccaaatctaatttaacggatttttcccgttttgattggggttgagtatgagtttgggttttccccgatttcaaaacacaggtatgggacgggtaaag 5377129  T
Q  314 agtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
     |||||||||||||||||||||||||||| || |||| ||||| ||||||||||| ||||    
T  5377128 ggtatataggtacccaccccgaacccatacccaaatctgtcccgaatgcagaaaattact 5377069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 45885683 - 45885862
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || | |||||||||   ||||| |||||||||  ||||||||||||||||| |||||| || |||||||| |||    
T  45885683 gcaacaaaacccatacccgtggttacccgctcgaaccaaacccaatttaacgggttttctccgttttgactgggtttgggtatgggtatgagttttcccc 45885782  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |  |||||||||| ||||    
T  45885783 gatctcaaaacacgggtatgggacgggtaacaagtatataggtacccaccccgaacccataccaaaatccgtcccaaatg 45885862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 182 - 368
Target Start/End: Original strand, 18825784 - 18825976
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggta------tgagtttgagtt 275  Q
    ||||||||||||||||  ||||||||||  ||||||||||   ||||||||||||||| |||||||||||||||||| |||       || ||||| |||    
T  18825784 gcaacaaaacccatacccatggttaaccgtccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtgagggtgtgggtttgggtt 18825883  T
Q  276 tttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    || |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| || || || || |||| ||| |||||||    
T  18825884 ttccccgatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccgtacccaaacccatcccaaatacagaaaa 18825976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 201 - 361
Target Start/End: Complemental strand, 16866325 - 16866165
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| | |||| || || ||||| |||||| | |||| ||||||||    
T  16866325 tggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttggttatgggtatgggttttccccgatctcaaaacacgggtat 16866226  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    |||||| |||||| |||||||||||||||||||||||||||| || || ||||||| ||||    
T  16866225 gggacgagtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 16866165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 7780183 - 7780004
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||| ||||||||||   |||||||||| |||| |||||||||||||||||| |||||| || || ||||| |||    
T  7780183 gcaacaaaacccatacccgtggttacccatccgaaccaaactcaatttgacggattttccccgttttgactgggtttgggtatgggtatgggttttcccc 7780084  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||||||||||||||| ||| | |||||||||||||||||||||||| ||| || || ||||||| ||||    
T  7780083 gatctcaaaacacgggtatgggacggataatgggtatataggtacccaccccgaacctatacccaaacccgtcccaaatg 7780004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 17885640 - 17885480
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| |  |||||||||||   ||||||||||||||| ||||||||||||||||||   |||| || || ||||| |||    
T  17885640 gcaacaaaacccatacccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgaatatgggtatgggttttcccc 17885541  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||| | ||||||||||||||||||| |||||||||| || ||||||||||||||    
T  17885540 gattttaaaacatgggtatgggacgggtaacgggtatataggttccaaccccgaacccata 17885480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 368
Target Start/End: Complemental strand, 12980509 - 12980366
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||| ||||||||| ||| |||||||||||||| |||||| ||||  ||||| |||||||| |||| ||||||||||||||||||| | ||||||| ||    
T  12980509 aatttaacgggttttccccattttgactgggtttgggtatgggttttggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataagt 12980410  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    |||||||||||||||||| || || ||||||| |||||| ||||    
T  12980409 acccaccccgaacccatacccaaacccgtcccaaatgcaaaaaa 12980366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 45380251 - 45380122
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||   |||||||||| |||| || ||||||||||||||| | |||| || || |||||||||||||| |||| |||||||||||||||||||    
T  45380251 ccgaaccaaacccaatttgacgg-ttttccctgttttgactgggtttggatatgggtatgggtttttcccgatttcaaaatacgggtatgggacgggtaa 45380153  T
Q  312 cgagtatataggtacccaccccgaacccata 342  Q
    || ||||||||||||||||||||||||||||    
T  45380152 cgggtatataggtacccaccccgaacccata 45380122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 17852027 - 17851838
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||| | |||||| || |||||||||||   ||||||| || ||||  ||||||||||||||||| |||||| || || ||||| |||    
T  17852027 gcaacaaaacccatacttgtggttacccgcccgaaccaaacccaatttgatggattttctccgttttgactgggtttgggtatgggtatgggttttcccc 17851928  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |||| |  ||||||||||||||||||||  |||||||||||||| |||||||||||| || || || |||| |||| | |||||||||    
T  17851927 gatcttaaca--cgggtatgggacgggtaacggatatataggtacccatcccgaacccatacccaaacccatcccaaatgtaaaaaactact 17851838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 202 - 338
Target Start/End: Original strand, 39455953 - 39456089
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   ||||||||| ||||| |||||||||||||||||| ||||||  | || ||||| |||||||| |||| | |||||||    
T  39455953 ggttacccgcccgaaccaaacccaatttgacgagttttccccgttttgactgggtttgggtatggatatgggttttccccgatttcaaaacatgggtatg 39456052  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacc 338  Q
    |||||||||||| ||||||||||||||||||||||||    
T  39456053 ggacgggtaacgggtatataggtacccaccccgaacc 39456089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 183 - 368
Target Start/End: Original strand, 2630493 - 2630677
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||| ||||  |||| || | |||| |||||||   ||||||||| ||||| ||| |||| ||||||||| |||||| ||||| ||||| ||||    
T  2630493 caacaaaaccgatacccatggatacctacccaaaccaaacccaatttgacgtgttttacccatttttactgggtttgggtatgggtttgggttttccccg 2630592  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    |||| |||| | ||||||||||||||| ||| |||||||| ||||||||||||||||||| || || ||||||| |||||| ||||    
T  2630593 attt-aaaacatgggtatgggacgggtgacgggtatatagatacccaccccgaacccatacccaaacccgtcccgaatgcaaaaaa 2630677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 338
Target Start/End: Complemental strand, 16079188 - 16079032
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||| ||||  |||||||||| |||||| | |||||||||| |||| ||||| |||||| |||||  ||    
T  16079188 gcaacaaaacccatactcgtggttacccgcccgaagcaaacctaatttgacgagttttttcggttttgactgagtttgggtataagtttgggttttctcc 16079089  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacc 338  Q
    ||| | |||| ||||||||||||||||||||| |||||||||| |||||||| ||||    
T  16079088 gatctcaaaacacgggtatgggacgggtaacgggtatataggtgcccaccccaaacc 16079032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 201 - 373
Target Start/End: Original strand, 27850269 - 27850435
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| || |||||||||||   |||||||||| |||| |||||||||| ||||||| |||||| ||||      | |||||||| |||| ||||||||    
T  27850269 tggttacccgcccgaaccaaacccaatttgacggtttttccccgttttgattgggtttgggtatgggttt------tccccgatttcaaaacacgggtat 27850362  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||||||||||| || |||||||||||| |||||||||||| || || ||||||| |||| |||||| ||||    
T  27850363 gggacgggtaacgggtgtataggtacccatcccgaacccatacccaaacccgtcccgaatgtagaaaattact 27850435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 41103825 - 41103671
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| ||||| | |||||| || | ||||||||||   ||||||||| ||||||||||||||||||||| | |||||| ||||      | |||    
T  41103825 gcaacaaaactcatacctgtggttacccgcgcgaaccaaatccgatttgacggatttttcccgttttgactgggtgtgggtatgggttt------tcccc 41103732  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| ||||||||||||||| ||||| ||||||| ||||||||||||||||||||    
T  41103731 gatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaacccata 41103671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 43507577 - 43507460
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||| ||||||| |||||||||||||||||| ||||| ||| || ||||| |||||||| |||| | ||||||| ||||||||||| |||||||||     
T  43507577 aatttgatgggttttccccgttttgactgggtttgggtataagtatgggttttccccgatttcaaaacatgggtatgagacgggtaacgggtatataggc 43507478  T
Q  325 acccaccccgaacccata 342  Q
    |||||||| |||||||||    
T  43507477 acccaccctgaacccata 43507460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 202 - 342
Target Start/End: Original strand, 44734297 - 44734435
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   ||||||||||||||| ||  |||||||||||||| || ||| || || ||||||| |||||| |||| |||||||||    
T  44734297 ggttacccgcccgaaccaaacccaatttgacgggttttccc--ttttgactgggtttgggaatgtgtatgtgtttttctcgatttcaaaacacgggtatg 44734394  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| ||||| | ||||||||||||||||||||||||||||    
T  44734395 ggaccggtaatgggtatataggtacccaccccgaacccata 44734435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 3226864 - 3227024
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||| ||||||||  ||||| ||  ||||||||||   |||||||||| |||| | |||||| |||| ||||  ||||| || || ||||| |||    
T  3226864 gcaacaaaatccatacatgcggttacccgtccgaaccaaacccaatttgacggattttcctcgttttaactgagtttgagtatgggtatgggttttcccc 3226963  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| ||||||||||||||||||||  | ||||||||||||||||||||||||||    
T  3226964 gatttcaaaacacgggtatgggacgggtaacaggaatataggtacccaccccgaacccata 3227024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 342
Target Start/End: Original strand, 38139730 - 38139870
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   ||||||| || |||| |||||||||||||||||| | |||| || || ||||| ||| |||| |||| ||| |||||    
T  38139730 ggttacccgcccgaaccaaacccaatttgatggattttccccgttttgactgggtttggatatgggtatgggttttccccaatttcaaaacacgagtatg 38139829  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  38139830 ggacgggtaatgagtatataagtacccaccccgaacccata 38139870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 342
Target Start/End: Complemental strand, 38153041 - 38152902
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   |||||||||| |||| |||||||||||||||||| |||||| || || ||||| |||||||| |||| | |||||||    
T  38153041 ggttacccgcccgaaccaaactcaatttgacggatttt-cccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacatgggtatg 38152943  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    | |||| |||||  |||||||||||||||||||||||||||    
T  38152942 gaacggataacggctatataggtacccaccccgaacccata 38152902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 342
Target Start/End: Complemental strand, 39317150 - 39317010
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| | ||||||| |||||||| | |||||| |||| |||||||||    
T  39317150 ggttatccgcccgaaccaaactcaatttgacgggttttccccgttttgactgggtttggatatgagtatgagttttcctcgatttcaaaacacgggtatg 39317051  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||| || ||||||| ||| ||| || |||| ||||    
T  39317050 ggacgggtagcgggtatatatgtatccatcctgaactcata 39317010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 329
Target Start/End: Complemental strand, 24753338 - 24753192
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||  |||||||||||  |||||||||| ||||  ||||||||||||||||| | |||| || || ||||| |||    
T  24753338 gcaacaaaacccatacccgtggttacccgtccgaaccaaattcaatttgacggattttctccgttttgactgggtttggatatgggtatgggtttt-ccc 24753240  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtaccca 329  Q
    ||| | |||| ||||||||||||||||||||| |||||||||||||||    
T  24753239 gatctcaaaacacgggtatgggacgggtaacgggtatataggtaccca 24753192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 225 - 326
Target Start/End: Complemental strand, 37182406 - 37182305
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| |||||||||||||||||| ||||||||| || |||||  |||| || |||| |||||||||||||||||| || ||||||||||    
T  37182406 aatttgacgggttttccccgttttgactgggtttgggtatgagtatgggttttctccgaattcaaaacacgggtatgggacgggtagcgggtatataggt 37182307  T
Q  325 ac 326  Q
    ||    
T  37182306 ac 37182305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 186 - 373
Target Start/End: Complemental strand, 37579432 - 37579246
Alignment:
Q  186 caaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgatt 285  Q
    ||||||||||||   |||||| || |||||||||||   |||| |||||||||| |||||||||||| ||||| |||||| |||||  ||||||||||||    
T  37579432 caaaacccatacgcgtggttacccgcccgaaccaaacccaattagacgggttttccccgttttgactaggtttgggtatgggtttggatttttcccgatt 37579333  T
Q  286 ttaaaaaacgggtatggg-acgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |  ||| ||||  ||||| | |||||||| |||||||||||||||||||||||| ||| || || | ||| | ||||||||||| ||||    
T  37579332 tcgaaacacgg--atgggtaagggtaacgggtatataggtacccaccccgaacctatacccaaagctgtctcaaatgcagaaaattact 37579246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 205 - 356
Target Start/End: Complemental strand, 3774222 - 3774070
Alignment:
Q  205 taaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggt-atgagtttgagtttttcccgattttaaaaaacgggtatggg 303  Q
    |||||||||||||||||  |||||||| || ||||||| | |||||||| |||| ||| ||| ||||||||||| ||| | |||| |||| ||| | | |    
T  3774222 taaccacccgaaccaaacctaatttgatggatttttcctgctttgactgagtttgggttatgggtttgagttttccccaactttataaaatgggcacgag 3774123  T
Q  304 acgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccc 356  Q
    |||||||||||| |||||||||||||||| |||||||||  | ||||||||||    
T  3774122 acgggtaacgaggatataggtacccaccctgaacccatactcaaatccgtccc 3774070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 33841208 - 33841093
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||||||||||||| ||||||||| || || ||||| |||||||||| |||||||| |||| ||||||||||||||||||||  |  |||| |||    
T  33841208 atttgacgggtttttcccgctttgactggtttgag-tatgaatttgagttttccccgatttcaaaacacgggtatgggacgggtaacatggttatatgta 33841110  T
Q  326 cccaccccgaacccata 342  Q
    | |||||||||||||||    
T  33841109 ctcaccccgaacccata 33841093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 23329131 - 23329012
Alignment:
Q  214 gaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    |||||||||  |||||||||||||||||| |||||  ||||| || ||||||||||| ||||||||| |||||||||| |   |||||||||||||| ||    
T  23329131 gaaccaaattcaatttgacgggtttttcctgttttagctgggattgggtatgagtttaagtttttcctgattttaaaacatctgtatgggacgggtagcg 23329032  T
Q  314 agtatataggtacccacccc 333  Q
     |||||||||||| ||||||    
T  23329031 ggtatataggtactcacccc 23329012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 182 - 300
Target Start/End: Original strand, 44658385 - 44658503
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| |  ||||||||||||  ||||||||||||||| | |||||||||||||||| |||||| || ||||||||||||    
T  44658385 gcaacaaaacccatacccgcggttacctgcccgaaccaaatccaatttgacgggttttcctcgttttgactgggtttgggtatgggtatgagtttttccc 44658484  T
Q  282 gattttaaaaaacgggtat 300  Q
    ||||| |||| ||||||||    
T  44658485 gatttcaaaacacgggtat 44658503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 208 - 313
Target Start/End: Complemental strand, 37218154 - 37218049
Alignment:
Q  208 ccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgg 307  Q
    ||||||||||||||   ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||  || |||| |||| || |||| |||||||    
T  37218154 ccacccgaaccaaactcaatttgatgggttttccccgttttgactgggtttgggtatgagtttgagttttatcctatttcaaaacacaggtacgggacgg 37218055  T
Q  308 gtaacg 313  Q
    ||||||    
T  37218054 gtaacg 37218049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 343
Target Start/End: Original strand, 41741368 - 41741528
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||  |  ||||| || |||||||||||   ||||||| | ||||| ||| |||| ||||| ||| ||||||||| || ||||| |||    
T  41741368 gcaacaaaacccatatttgcggttacccgcccgaaccaaacccaatttgatgagttttccccatttttactggatttgggtatgagtatgggttttcccc 41741467  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatat 343  Q
    ||||| |||| ||||||||| ||||| ||||| |||| |||||||||| |||||||||||||    
T  41741468 gatttcaaaacacgggtatgagacggataacgggtatgtaggtaccca-cccgaacccatat 41741528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 337
Target Start/End: Original strand, 30839095 - 30839207
Alignment:
Q  226 atttgacgggtttt-tcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||||||| | ||| ||||||||||||| |||||||||||||||||| || ||||| |||| |||||||||||||| |||||| | ||||| ||    
T  30839095 atttgacgggttttcttccgatttgactgggtttgggtatgagtttgagttttccctgatttcaaaatacgggtatgggacgagtaacgtggatatatgt 30839194  T
Q  325 acccaccccgaac 337  Q
    | | |||||||||    
T  30839195 atctaccccgaac 30839207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 211 - 356
Target Start/End: Complemental strand, 3157228 - 3157084
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    |||||||||||  ||||||| ||| |||| |||| ||||||| ||||| |||||| ||||  ||||| |||||||| |||| | ||||||||||||| ||    
T  3157228 cccgaaccaaacctaatttgtcgg-ttttccccgctttgacttggtttgggtatgggtttaggttttccccgatttcaaaatatgggtatgggacggata 3157130  T
Q  311 acgagtatataggtacccaccccgaacccatatcctaatccgtccc 356  Q
    ||| | |||||||||||||| ||||||| ||| || || |||||||    
T  3157129 acggggatataggtacccacaccgaacctatacccaaacccgtccc 3157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 203 - 368
Target Start/End: Complemental strand, 3920680 - 3920527
Alignment:
Q  203 gttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgg 302  Q
    |||| ||||||||||||||   ||||||| |||||||||||||||||||||||||| |||            ||| |||||||| |||| || |||||||    
T  3920680 gttacccacccgaaccaaacccaatttgatgggtttttcccgttttgactgggtttgggt------------tttccccgatttcaaaacactggtatgg 3920593  T
Q  303 gacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    ||||| ||||  |||||||||||||||||||||||||||| || || | ||||| |||| ||||||    
T  3920592 gacggataacaggtatataggtacccaccccgaacccatacccaaaactgtcccgaatgtagaaaa 3920527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 25905803 - 25905644
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || | ||||| |||   |||||||| |||||| ||| |||||||||||||| |||||| || || ||||| |||    
T  25905803 gcaacaaaacccatacccgtggttacccgctcgaactaaacccaatttgacaggttttcccctttttgactgggtttgggtatgggtatgggttttcccc 25905704  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
     || | |||| || |||||||||||||||||| ||| ||||||| ||||||||||| ||||    
T  25905703 aatctcaaaacacaggtatgggacgggtaacgggtacataggta-ccaccccgaactcata 25905644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 27063269 - 27063153
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| |||| || | ||||||||||||| |||||||||||||||||| | |||||| |||| |||||||  |||||| ||||| | ||||| |||    
T  27063269 atttgacggattttccctgatttgactgggtttgggtatgagtttgagttttcctcgatttcaaaatacgggtacaggacggataacggggatatatgta 27063170  T
Q  326 cccaccccgaacccata 342  Q
    | |||||||||| ||||    
T  27063169 ctcaccccgaactcata 27063153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 27063465 - 27063349
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| ||||||||  ||||||||||||| |||||| || |  ||||| |||||||| | || ||||||| ||||||||||||| | ||||| |||    
T  27063465 atttgacggatttttcccaatttgactgggtttgggtatgggtctcggttttccccgatttaataatacgggtacgggacgggtaacgggaatatatgta 27063366  T
Q  326 cccaccccgaacccata 342  Q
    |||||||||||| ||||    
T  27063365 cccaccccgaactcata 27063349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 266 - 373
Target Start/End: Original strand, 25782909 - 25783016
Alignment:
Q  266 agtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcaga 365  Q
    |||||| |||||  |||||| ||||| ||||||||| ||||| ||| | ||||||||||||||||||||||| |||| |  |||||||||| ||||||||    
T  25782909 agtttgggttttctccgattataaaacacgggtatgagacggataatgggtatataggtacccaccccgaactcataccaaaatccgtcccgaatgcaga 25783008  T
Q  366 aaactact 373  Q
    ||| ||||    
T  25783009 aaattact 25783016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 29014928 - 29014995
Alignment:
Q  240 tcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgg 307  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||    
T  29014928 tcccgatttgattgggtttaggtatgagtttgagtttttcccgatttcaaaatacgggtacgggacgg 29014995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 329
Target Start/End: Original strand, 42908003 - 42908106
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| ||||||||  ||||| ||||||| |||||||||||| ||||| |||||||| |||| ||||||| ||||||||||| | | ||||| |||    
T  42908003 atttgacggttttttcccaatttgattgggtttgggtatgagtttgggttttccccgatttcaaaatacgggtacgggacgggtaatggggatatatgta 42908102  T
Q  326 ccca 329  Q
    ||||    
T  42908103 ccca 42908106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 342
Target Start/End: Original strand, 44845107 - 44845213
Alignment:
Q  236 tttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccga 335  Q
    ||||| |||||||||||| |||| |||||| ||||| ||||| |||||||| | || ||||||| ||||||| ||| ||| |||||  ||||||||||||    
T  44845107 ttttttccgttttgactgagttttggtatgggtttgggttttccccgatttcataatacgggtacgggacggttaatgaggatatatttacccaccccga 44845206  T
Q  336 acccata 342  Q
    |||||||    
T  44845207 acccata 44845213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 31426119 - 31426023
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||||| |||||  ||||| ||||| |||||||| |||| ||||||||| ||||||||||| | ||||| ||| ||||||||||| ||||    
T  31426119 tttgactgggttttggtattggtttgggttttccccgatttaaaaatacgggtatgagacgggtaacggggatatatgtatccaccccgaacgcata 31426023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 226 - 345
Target Start/End: Original strand, 8906551 - 8906670
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||||||||  ||| ||||| ||| ||| |||||| |||||||||||  ||||||| |||| ||| ||||| ||||  ||||| |  |||| |||    
T  8906551 atttgacgggttttctccgctttgattggatttgggtatgggtttgagttttctccgatttcaaaacacgagtatgagacgaataacggggttatatgta 8906650  T
Q  326 cccaccccgaacccatatcc 345  Q
    ||||||||||||||||||||    
T  8906651 cccaccccgaacccatatcc 8906670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 24425455 - 24425364
Alignment:
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||| || ||||| ||| || |||| || |||||| |||| ||||    
T  24425455 gatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccctgaccccatttccaaacccgttccaaatgcataaaattact 24425364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 26004404 - 26004552
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| |||||   |||||| || ||||||||||| | ||||||| ||||||||||||||||||||||            ||||| ||||| | |    
T  26004404 gcaacaaaactcatacccgtggttacccgcccgaaccaaacacaatttgatgggtttttcccgttttgactgg------------gtttgggttttcctc 26004491  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||   ||||||||||||||||||  |||||||| |||||||||||||||||||    
T  26004492 gatttcaaaacttgggtatgggacgggtaacaggtatatagatacccaccccgaacccata 26004552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 32546311 - 32546207
Alignment:
Q  241 cccgttttgactgggtttagg---tatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaac 337  Q
    |||| ||||||||||||| ||   |||| |||||  ||||||||||||| |||| ||||||| || |||||||||| | ||||| |||||||||||||||    
T  32546311 cccgatttgactgggtttggggcgtatgggtttggatttttcccgatttcaaaatacgggtacggaacgggtaacggggatatatgtacccaccccgaac 32546212  T
Q  338 ccata 342  Q
    |||||    
T  32546211 ccata 32546207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 22973504 - 22973403
Alignment:
Q  241 cccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaaccca 340  Q
    |||| ||||||||||||| |||||| ||||| ||||| | |||||| |||| ||||||| ||||||||||| | | ||||  ||||||||| ||||||||    
T  22973504 cccgatttgactgggtttgggtatgggtttgggttttccacgatttcaaaatacgggtacgggacgggtaatggggatatctgtacccacctcgaaccca 22973405  T
Q  341 ta 342  Q
    ||    
T  22973404 ta 22973403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 213 - 361
Target Start/End: Original strand, 11472664 - 11472810
Alignment:
Q  213 cgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaac 312  Q
    |||||| ||| |||||||||||||||| ||| |||| | ||| ||| ||||||||||||||||||||||||||| |||| |  |||||  || || ||||    
T  11472664 cgaaccgaatttaatttgacgggttttaccc-ttttaattggattttggtatgagtttgagtttttcccgatttcaaaacagaggtataagatggataac 11472762  T
Q  313 gagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    | | |||||||||| || || |||| |||| || |||||||||| ||||    
T  11472763 gggaatataggtactca-cctgaactcatacccaaatccgtcccaaatg 11472810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 342
Target Start/End: Complemental strand, 26623041 - 26622966
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||| || ||||| |||| |||||||||||| |||||| | ||||||| ||||||||||||||||||||    
T  26623041 gtttgggttttccctgatttcaaaacacgggtatgggatgggtaatgggtatataagtacccaccccgaacccata 26622966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 342
Target Start/End: Original strand, 10995830 - 10995912
Alignment:
Q  260 ggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||| ||||| |||||||| || | ||||||||||||||||||||  |  ||||  |||||||||||||||||||    
T  10995830 ggtatgagtttgggttttccccgatttcaagacacgggtatgggacgggtaacagggttatatatacccaccccgaacccata 10995912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 44794052 - 44794105
Alignment:
Q  288 aaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  44794052 aaaacacgggtatgagacgggtaacgagtata-aggtacccaccccgaacccata 44794105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 288 - 342
Target Start/End: Original strand, 45708889 - 45708943
Alignment:
Q  288 aaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||||||| |||||||||||| ||||||||||||||||||||||| ||||    
T  45708889 aaaacacgggtattggacgggtaacgggtatataggtacccaccccgaactcata 45708943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 18684090 - 18683989
Alignment:
Q  241 cccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaaccca 340  Q
    |||| ||||||| ||||| |||||| ||| | ||||| |||||||| |||| ||||||| ||||||||||||  | ||||| ||| ||||| ||||||||    
T  18684090 cccgatttgactaggtttgggtatgggttcgggttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatccacctcgaaccca 18683991  T
Q  341 ta 342  Q
    ||    
T  18683990 ta 18683989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 27896436 - 27896553
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||| ||||||||| || ||||| ||||||| |||||| ||||| ||||| ||  |||| |||| | ||||||||||||||||||| |  |||| |     
T  27896436 aatttgatgggtttttctcgctttgattgggtttgggtatgggtttgggttttcccttatttcaaaacatgggtatgggacgggtaacggggttatatgc 27896535  T
Q  325 acccaccccgaacccata 342  Q
    ||| ||||||||| ||||    
T  27896536 accaaccccgaactcata 27896553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 23475266 - 23475360
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||||| |||||||||||||| |||| |||||| ||||| |||||| | | ||||| ||||||||  |||||||||| || || ||||||| ||||    
T  23475266 gtttgggtttttcccgatttcaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatg 23475360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 5565269 - 5565385
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| |||| |||| ||||||||| ||| | |||  ||||| ||||| || ||||| |||  |||| ||||||| |||||||| |  |||| |||    
T  5565269 atttgacggattttccccgctttgactggatttggttataggtttgggttttccctgatttcaaagtacggatatgggatgggtaacggggttatatgta 5565368  T
Q  326 cccaccccgaacccata 342  Q
    |||||||| ||||||||    
T  5565369 cccacccctaacccata 5565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 368
Target Start/End: Original strand, 46127195 - 46127287
Alignment:
Q  276 tttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    ||||||||||| |||  ||||||||||||||| ||||  || ||||||||||||| |||| | ||||  | || ||||||| |||||||||||    
T  46127195 tttcccgatttaaaatcacgggtatgggacggataacaggtgtataggtacccacaccgatctcatactcaaacccgtcccaaatgcagaaaa 46127287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 246 - 313
Target Start/End: Complemental strand, 2472094 - 2472027
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    ||||| ||||||| ||||||||||||||||||| ||||||| | || |||||||   |||||||||||    
T  2472094 tttgattgggtttgggtatgagtttgagttttttccgatttcataatacgggtactagacgggtaacg 2472027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 211 - 258
Target Start/End: Original strand, 23533563 - 23533610
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggttt 258  Q
    |||||||||||   |||||||||||||||||||| |||||||||||||    
T  23533563 cccgaaccaaacccaatttgacgggtttttcccgatttgactgggttt 23533610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 265
Target Start/End: Original strand, 44985856 - 44985919
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatg 265  Q
    ||||| ||| ||||||||||| ||||||||||| ||||  ||||||||| ||||||| ||||||    
T  44985856 ggttacccatccgaaccaaatctaatttgacggattttctccgttttgattgggtttgggtatg 44985919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 19440013 - 19440107
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||||||||||| || ||||| |||| |||||| ||||| |||||| | | ||||| ||||||||  |||||||||| || || ||||||| ||||    
T  19440013 gtttgagttttccctgatttgaaaacacgggtttgggatgggtaatggggatatatgtacccacttcgaacccatacccaaacccgtcccgaatg 19440107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 273 - 351
Target Start/End: Original strand, 25979926 - 25980004
Alignment:
Q  273 gtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatcc 351  Q
    ||||| |||||||| |||| || |||||| |||||||||||  |||||| ||||||||||| ||| |||| || |||||    
T  25979926 gttttccccgatttcaaaacacaggtatgagacgggtaacggatatatatgtacccaccccaaactcatacccaaatcc 25980004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 21750866 - 21750797
Alignment:
Q  273 gtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||||| |||| |||| |||| ||||||| ||| | ||||| ||||||||| ||||| ||||    
T  21750866 gtttttcccgatttcaaaatacggatatgagacgggtgacggggatatatgtacccacctcgaactcata 21750797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 1e-44; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 3483841 - 3484032
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||  ||||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||    
T  3483841 gcaacaaaacccatactcatggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgtgtatgggttttcccc 3483940  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| |||||||||||| |||||||| |||||||||||||||||||||||||||| || || ||||||| |||| | |||||||||    
T  3483941 gatctcgaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 3484032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 12141555 - 12141376
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||| |||||||| || ||||||||||||  ||||||||||||||| |||||||||||||||||| |||| | || || ||||| |||    
T  12141555 gcaacaaaacccatacctatggttacccgcccgaaccaaattcaatttgacgggttttccccgttttgactgggtttgggtacgggtatgggttttcccc 12141456  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
     || | |||| |||| |||||||||||| ||| |||||||||||||||||||||||||||| || || ||||||| ||||    
T  12141455 aatctcaaaacacggatatgggacgggtgacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 12141376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 27534854 - 27534663
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||||||  ||||||||||   ||||||||||||||| |||||||||| ||||||| |||||| || |||||||| |||    
T  27534854 gcaacaaaacccatacccgtggttaaccgtccgaaccaaactcaatttgacgggttttccccgttttgattgggtttgggtatgggtatgagttttcccc 27534755  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||| ||||| || || ||||||| |||| | |||||||||    
T  27534754 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaatccatacccaaacccgtcccaaatgtaaaaaactact 27534663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 5863301 - 5863480
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| |  |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||    
T  5863301 gcaacaaaacccatacccgtggttacctgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttcccc 5863400  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||||| |||| ||||||||||||||||||||| |||||||| |||||||| |||||||||| || || ||||||| ||||    
T  5863401 gatttcaaaacacgggtatgggacgggtaacgggtatatagatacccacctcgaacccatacccaaacccgtcccaaatg 5863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 211 - 361
Target Start/End: Complemental strand, 27738913 - 27738763
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    ||||||||||||  ||||||| ||||||||||||||||||||||||||||||||| || || ||||| |||||||| |||| ||||||||||||||||||    
T  27738913 cccgaaccaaattcaatttgatgggtttttcccgttttgactgggtttaggtatgggtatgggttttccccgatttcaaaacacgggtatgggacgggta 27738814  T
Q  311 acgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||   |||||| |||||||||||||||||||| || || ||||||| ||||    
T  27738813 acagatatatatgtacccaccccgaacccatacccaaacccgtcccaaatg 27738763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 32854014 - 32853835
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||  ||||||||||   |||||||||||||||  ||||||||||||||||| | |||| || || ||||| |||    
T  32854014 gcaacaaaacccatacccgtggttatccgaccgaaccaaacccaatttgacgggttttctccgttttgactgggtttggttatgggtatgggttttcccc 32853915  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| ||||    
T  32853914 gatctcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 32853835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 10142436 - 10142596
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||| | |||||| || | |||||||||   |||||| |||||||| | |||||||||||||||| |||||| || || ||||| |||    
T  10142436 gcaacaaaacccatacttgtggttatccgctcgaaccaaactcaatttggcgggttttcctcgttttgactgggtttgggtatgggtatgggttttcccc 10142535  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||| | |||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||    
T  10142536 gatctcaaaaaacgggtatgggacaggtaacgggtatataggtacccaccccgaactcata 10142596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 2367496 - 2367317
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||    |||||| ||  ||||||||||   ||||||| |||||||||||||||||||| ||||| |||||| || || ||||| |||    
T  2367496 gcaacaaaacccatatccgtggttacccgtccgaaccaaacccaatttgatgggtttttcccgttttgactaggtttgggtatgggtatgggttttcccc 2367397  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||||||||||||||||||||| ||||||| |||||||||||||||||||| || || ||||||| ||||    
T  2367396 gatctcaaaacacgggtatgggacgggtaacgggtatataagtacccaccccgaacccatacccaaacccgtcccaaatg 2367317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 32532667 - 32532550
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||||||||| ||||||| | |||||||  |||||||| || ||||| |||||||| |||| ||||||||||||||||||| | ||||||||||    
T  32532667 aatttgacgggttttttccgttttcattgggtttgagtatgagtatgggttttccccgatttcaaaacacgggtatgggacgggtaatgggtatataggt 32532568  T
Q  325 acccaccccgaacccata 342  Q
    ||||||||||||||||||    
T  32532567 acccaccccgaacccata 32532550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 211 - 341
Target Start/End: Complemental strand, 9442570 - 9442441
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    |||||||||||   ||||||||||||||| |||||||||||||| ||| |||||| || || | |||||||||||| |||| ||||||||||||||||||    
T  9442570 cccgaaccaaactcaatttgacgggttttccccgttttgactgg-tttgggtatgggtatgggattttcccgatttcaaaacacgggtatgggacgggta 9442472  T
Q  311 acgagtatataggtacccaccccgaacccat 341  Q
    ||| ||||| |||||||||| ||||||||||    
T  9442471 acgggtatagaggtacccactccgaacccat 9442441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 10187998 - 10188151
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||    
T  10187998 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttcccc 10188097  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||| | |||| |||||||||||||||       ||||||||||||||||||||||||||||    
T  10188098 gatctcaaaacacgggtatgggacgg-------gtatataggtacccaccccgaacccata 10188151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 201 - 356
Target Start/End: Original strand, 12678031 - 12678186
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| ||||| ||||||||  ||  | ||| ||||||  ||||||||||||||||| |||||||||||| ||||| |||||||| || | || |||||    
T  12678031 tggttacccacctgaaccaaacctatctcgacaggttttcgccgttttgactgggtttgggtatgagtttgcgttttccccgatttcaagacacaggtat 12678130  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccc 356  Q
    ||||||||||| | |||||||||||||||||| ||||||||| || || |||||||    
T  12678131 gggacgggtaaagggtatataggtacccaccctgaacccatacccaaacccgtccc 12678186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 182 - 321
Target Start/End: Complemental strand, 30986423 - 30986284
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   ||||||||||||||| ||||||||||||| |||| |||||| || || ||||| |||    
T  30986423 gcaacaaaacccatacccgtggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactgagtttgggtatgggtatgggttttcccc 30986324  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatata 321  Q
    ||| | |||| ||||||||||||||||||||| |||||||    
T  30986323 gatctcaaaacacgggtatgggacgggtaacgggtatata 30986284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 212 - 368
Target Start/End: Complemental strand, 30816398 - 30816244
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||   ||||||| || |||| |||||||||| ||||||| | |||| ||||||||||| ||| |||||||| | ||||||||||| ||||||    
T  30816398 ccgaaccaaacccaatttgatggattttccccgttttgattgggtttggatatgggtttgagttttcccc-attttaaaca-cgggtatgggatgggtaa 30816301  T
Q  312 cgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
     | ||||||||| ||||||||||||||||||||| || ||||||| |||||| ||||    
T  30816300 tgggtatataggaacccaccccgaacccatatccaaacccgtcccgaatgcaaaaaa 30816244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 225 - 368
Target Start/End: Complemental strand, 13769199 - 13769056
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||| ||||||||| | || |||||||||||||||||||| ||||  ||||| ||||| || |||| | |||||||||||||||||||   ||||||||    
T  13769199 aatttcacgggttttactcgctttgactgggtttaggtatgggtttcggttttccccgacttcaaaacatgggtatgggacgggtaacggacatataggt 13769100  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    |||||||| |||||||||||| || ||||||  |||| ||||||    
T  13769099 acccacccagaacccatatccaaacccgtcctgaatgtagaaaa 13769056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 227 - 342
Target Start/End: Original strand, 28079659 - 28079774
Alignment:
Q  227 tttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtac 326  Q
    |||||||||| ||||||| |||| ||| |||| |||||| ||||| ||||| |||||||| |||| | ||||| ||||||||||||| | ||||||||||    
T  28079659 tttgacgggtatttcccgctttggctgagtttgggtatgggtttgggttttccccgatttcaaaacatgggtacgggacgggtaacggggatataggtac 28079758  T
Q  327 ccaccccgaacccata 342  Q
    ||||||||||||||||    
T  28079759 ccaccccgaacccata 28079774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 226 - 336
Target Start/End: Original strand, 20610944 - 20611054
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||||||||||||| ||| |||||||||||||||| ||||| | ||| |||||||| |||| ||||||| ||||||||||||| | ||||| |||    
T  20610944 atttgacgggtttttcccgatttaactgggtttaggtatgggtttggggtttccccgatttcaaaatacgggtaggggacgggtaacgggaatatatgta 20611043  T
Q  326 cccaccccgaa 336  Q
     ||||||||||    
T  20611044 tccaccccgaa 20611054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 267 - 355
Target Start/End: Original strand, 14410858 - 14410946
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtcc 355  Q
    ||||||||||| || ||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||    
T  14410858 gtttgagttttcccagatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcc 14410946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 267 - 378
Target Start/End: Complemental strand, 14506171 - 14506060
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    ||||| ||||| |||||||| |||| || ||||||||||||||||| ||||| |||||||||||||||||||||||    || ||||||| |||||||||    
T  14506171 gtttgggttttccccgatttcaaaacacaggtatgggacgggtaacaagtatttaggtacccaccccgaacccatacttaaacccgtcccaaatgcagaa 14506072  T
Q  367 aactactctgtg 378  Q
    ||||||| ||||    
T  14506071 aactactttgtg 14506060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 183 - 341
Target Start/End: Complemental strand, 24225873 - 24225709
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagt------tt 276  Q
    ||||||||| |||||  ||||||| ||  |||||||||||  |||||||| |||||| |||||||||| ||||||| ||| || || || ||      ||    
T  24225873 caacaaaactcatacccatggttacccgtccgaaccaaattcaatttgacaggttttccccgttttgattgggtttgggtttgggtatgggtatggattt 24225774  T
Q  277 ttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccat 341  Q
    | |||||| | |||| |||| |||||||||||||||| |||||||||||||||||||||||||||    
T  24225773 tccccgatctcaaaacacggatatgggacgggtaacgggtatataggtacccaccccgaacccat 24225709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 225 - 373
Target Start/End: Complemental strand, 11762572 - 11762424
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| ||| |||| ||||||||| | ||||  |||  ||||||||||||||  ||| | ||||||||||||||||||| ||||||||||    
T  11762572 aatttgacgggttttccccatttttactgggtttggatatggatttaggtttttcccgatttctaaacaagggtatgggacgggtaacgggtatataggt 11762473  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
      ||||||||||| |||| || || || |||| |||| |||||| ||||    
T  11762472 gtccaccccgaactcatacccaaacccatcccaaatgtagaaaattact 11762424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 18909019 - 18908903
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| ||||||||| | |||||| ||||  ||||||||||| ||||| |||||||| |||| |||| ||||||||||||||| || ||||| |||    
T  18909019 atttgacggatttttcccgatgtgactgagtttgagtatgagtttgggttttccccgatttcaaaatacggatatgggacgggtaacaaggatatatgta 18908920  T
Q  326 cccaccccgaacccata 342  Q
    |||||||| ||| ||||    
T  18908919 cccaccccaaactcata 18908903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 15498494 - 15498315
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||| ||||||  | ||||| || |||||| ||||   ||||| |||||||||  ||||||||| ||||||| ||||||  | || ||||| |||    
T  15498494 gcaacaaaatccatactcacggttatccgcccgaatcaaacccaatttaacgggttttctccgttttgaatgggtttgggtatggatatgggttttcccc 15498395  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||||| |||| ||||||||| ||| ||||| | ||||||||||||||| |||||||||| | || || ||||||| ||||    
T  15498394 gatttcaaaacacgggtatgagacaggtaatgggtatataggtacccatcccgaacccacacccaaacccgtcccaaatg 15498315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 225 - 355
Target Start/End: Complemental strand, 32053209 - 32053085
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| |||||||||||||||||| |||||| ||||      | |||||||| |||| | || |||||||||||||||| ||||||| ||    
T  32053209 aatttgacgggttttccccgttttgactgggtttgggtatgggttt------tccccgatttcaaaacatggatatgggacgggtaacgggtatatatgt 32053116  T
Q  325 acccaccccgaacccatatcctaatccgtcc 355  Q
    ||||||||| |||||||| || || ||||||    
T  32053115 acccaccccaaacccatacccaaacccgtcc 32053085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 255 - 353
Target Start/End: Complemental strand, 20349161 - 20349063
Alignment:
Q  255 gtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgt 353  Q
    |||| ||||||||||||  |||| |||||||| |||| |||||||||||||| |||||| | ||||||||||||||||||||| |||| || |||||||    
T  20349161 gttttggtatgagtttggattttccccgatttcaaaacacgggtatgggacgagtaacggggatataggtacccaccccgaactcatacccaaatccgt 20349063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 351
Target Start/End: Complemental strand, 9458789 - 9458664
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||| |||| |||| ||||||||||||| |||||||||||||| ||| ||| |||| |||| ||||||| ||||| | ||||| | ||||| |||    
T  9458789 atttgacggattttccccgatttgactgggtttgggtatgagtttgagatttccccaatttcaaaatacgggtacgggacagataacggggatatatgta 9458690  T
Q  326 cccaccccgaacccatatcctaatcc 351  Q
    |||||| ||||| |||| || |||||    
T  9458689 cccacctcgaactcatacccaaatcc 9458664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 322
Target Start/End: Complemental strand, 31496604 - 31496464
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||  || |||||||   ||||||||||||||| |||||||||||||||||| |||||| || |||||||| |||    
T  31496604 gcaacaaaacccatacccgtggttacccgtccaaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgggtatgagttttcccc 31496505  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatatag 322  Q
    ||| |  ||| | ||||||||||||||  ||| ||||||||    
T  31496504 gatctcgaaacatgggtatgggacgggggacgggtatatag 31496464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 322
Target Start/End: Complemental strand, 31501990 - 31501850
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| ||  || |||||||   ||||||||||||||| |||||||||||||||||| |||||| || |||||||| |||    
T  31501990 gcaacaaaacccatacccgtggttacccgtccaaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgggtatgagttttcccc 31501891  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatatag 322  Q
    ||| |  ||| | ||||||||||||||  ||| ||||||||    
T  31501890 gatctcgaaacatgggtatgggacgggggacgggtatatag 31501850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 225 - 368
Target Start/End: Complemental strand, 29341383 - 29341240
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||| | |||||  ||||||||| ||||||| | |||||||||| ||||||||||||||| ||| | ||| ||| |||||||||||   ||||||||    
T  29341383 aatttgatgagttttctccgttttgattgggtttggatatgagtttgggtttttcccgattttcaaacatgggcatgagacgggtaacggagatataggt 29341284  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    ||||| ||| ||| |||| || || ||||||| |||| ||||||    
T  29341283 acccatcccaaactcatacccaaacccgtcccgaatgtagaaaa 29341240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 209 - 342
Target Start/End: Original strand, 256437 - 256570
Alignment:
Q  209 cacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacggg 308  Q
    |||||||||||||   ||||| | || |||| |||| ||||  || |||| |||||||||||||||||| |||||||| |||| | ||||| | ||||||    
T  256437 cacccgaaccaaactcaatttaatggattttccccgctttggttgtgtttgggtatgagtttgagttttccccgatttcaaaacatgggtacgagacggg 256536  T
Q  309 taacgagtatataggtacccaccccgaacccata 342  Q
    ||| | | ||||||||||||||||| ||||||||    
T  256537 taatgggcatataggtacccaccccaaacccata 256570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 243 - 363
Target Start/End: Complemental strand, 14255066 - 14254947
Alignment:
Q  243 cgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||||||| |||||| |||||||||||  | ||||| ||| | ||||||||||||| ||||||   |||||||||||||||  |||||||||    
T  14255066 cgttttgactgggtttgggtatgggtttgagttttctctgatttcaaaca-cgggtatgggacgtgtaacggaaatataggtacccaccatgaacccata 14254968  T
Q  343 tcctaatccgtccccaatgca 363  Q
     || ||| |||||| ||||||    
T  14254967 cccaaattcgtcccaaatgca 14254947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 241 - 337
Target Start/End: Complemental strand, 9458969 - 9458873
Alignment:
Q  241 cccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaac 337  Q
    |||| ||||||||||||| |||||| || || ||||| |||||||| | || ||||||| |||| |||||||| | ||||| |||||||||||||||    
T  9458969 cccgatttgactgggtttgggtatgggtctgggttttccccgatttaataatacgggtacgggatgggtaacgggaatatatgtacccaccccgaac 9458873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 267 - 333
Target Start/End: Complemental strand, 14034587 - 14034521
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccacccc 333  Q
    ||||||||||| ||||||||||| | ||  ||||| ||||||||||| |||||||||||||||||||    
T  14034587 gtttgagttttccccgattttaagacacaagtatgagacgggtaacgggtatataggtacccacccc 14034521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 252 - 361
Target Start/End: Complemental strand, 12309672 - 12309563
Alignment:
Q  252 tgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatcc 351  Q
    ||||||| |||||| || || || || || ||||| |||| |||||||||| |||||||||  ||||||| |||||||||||||||| ||| || || ||    
T  12309672 tgggtttgggtatgggtatgggtattccctgatttcaaaacacgggtatggaacgggtaacaggtatatatgtacccaccccgaaccgatacccaaaccc 12309573  T
Q  352 gtccccaatg 361  Q
    ||||| ||||    
T  12309572 gtcccaaatg 12309563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 368
Target Start/End: Original strand, 34346005 - 34346109
Alignment:
Q  264 tgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgca 363  Q
    ||||| || ||||||||||||||||||| ||||||  ||  || |||||| | |||||||||||||||||||| | ||| || ||||||| || |||| |    
T  34346005 tgagtatgggtttttcccgattttaaaatacgggttcggagcgagtaacggggatataggtacccaccccgaatctatacccaaatccgttccgaatgta 34346104  T
Q  364 gaaaa 368  Q
    |||||    
T  34346105 gaaaa 34346109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 267 - 342
Target Start/End: Original strand, 24602859 - 24602934
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||| || ||||| |||| | ||||||| ||||||||||  |||||||| |||||||||||||||||||    
T  24602859 gtttgggttttcccagatttcaaaacatgggtatgtgacgggtaacaggtatatagatacccaccccgaacccata 24602934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 228 - 311
Target Start/End: Original strand, 32054189 - 32054271
Alignment:
Q  228 ttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||| |||||||  ||||| |||| | ||||||| |||| ||||    
T  32054189 ttgacgggtttttcccgcttttactgggtt-aggtatgagtttgggtttttcttgatttcaaaacatgggtatgagacgagtaa 32054271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 250 - 342
Target Start/End: Original strand, 5108917 - 5109009
Alignment:
Q  250 actgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||| |||||| |||||||||||||||||||| |||| | | |||||||| |  | ||  | ||||| ||||||||||||||| ||||    
T  5108917 actgggtttcggtatgggtttgagtttttcccgatttcaaaacatgtgtatgggatgaatgacagggatataagtacccaccccgaactcata 5109009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 215 - 341
Target Start/End: Original strand, 21875600 - 21875727
Alignment:
Q  215 aaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacga 314  Q
    |||||||  ||||||||| ||||||   ||| |||||||||||| ||| || |||||||||||  || |||||| || ||||||| ||||||| ||||      
T  21875600 aaccaaacttaatttgacaggttttcttcgtattgactgggttttggtttgggtttgagttttctccaattttataacacgggtacgggacggataacat 21875699  T
Q  315 gtatataggtacccacccc-gaacccat 341  Q
    | | |||| |||||||||| ||||||||    
T  21875700 ggagatagatacccacccctgaacccat 21875727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 32959929 - 32959870
Alignment:
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||| ||||||| || |||||||||| | ||||||||| ||||||||||||||||    
T  32959929 atttcaaaacacgggtacggaacgggtaacggggatataggtatccaccccgaacccata 32959870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 258
Target Start/End: Complemental strand, 14506225 - 14506168
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggttt 258  Q
    |||||||||| |||||| |||   ||||||||||||||| ||| ||||||||||||||    
T  14506225 tggttaaccatccgaacgaaactcaatttgacgggttttccccattttgactgggttt 14506168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 7393897 - 7393965
Alignment:
Q  274 tttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||||||| |||| ||| ||| | ||||| ||| | ||||||||||| ||||||||||||||||    
T  7393897 ttttccccgatttcaaaacacgagtaagagacggataatgggtatataggtatccaccccgaacccata 7393965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 14034660 - 14034584
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggttt 258  Q
    |||||||||||||||    |||||| |||||||||| |||   | ||||| ||||||| ||||||||||||||||||    
T  14034660 gcaacaaaacccataaccgtggttacccacccgaactaaacccattttgatgggttttacccgttttgactgggttt 14034584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 29199895 - 29199963
Alignment:
Q  274 tttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||||||| |||| ||||||| ||||||||||||  | ||||| ||| | ||||||||||||||    
T  29199895 ttttccccgatttcaaaatacgggtacgggacgggtaacagggatatatgtatctaccccgaacccata 29199963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 88; Significance: 3e-42; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 24414050 - 24414241
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||| | |||||| || |||||||||||   ||||||||||||||| |||||||||| ||||||| |||||| || |  ||||| |||    
T  24414050 gcaacaaaacccatacctgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggtatgggtatcggttttcccc 24414149  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| | |||| ||||||||||||||||||||  |||||||||||||||||||||||||||| || || ||||||| |||| | |||||||||    
T  24414150 gatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 24414241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 182 - 356
Target Start/End: Complemental strand, 30847117 - 30846943
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||    
T  30847117 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttcccc 30847018  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccc 356  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || |||||||    
T  30847017 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtccc 30846943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 9632557 - 9632366
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   |||||||||||||||||||||||||| |||||||  ||||| || || ||||| |||    
T  9632557 gcaacaaaacccatacccgtggttacccgcccgaaccaaactcaatttgacgggtttttcccgttttgaatgggtttgagtatgggtatgggttttcccc 9632458  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||||||||||||| | ||||||||||| |||||||||||||||| || || ||||||| |||| | |||||||||    
T  9632457 gatctcgaaacacgggtatgggacgggtaatgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 9632366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 342
Target Start/End: Original strand, 7314586 - 7314726
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    |||||||| |||||||||||   |||||||||| |||| |||||||||||||||||| | |||| || || ||||| ||||||||||||| ||| |||||    
T  7314586 ggttaaccgcccgaaccaaactcaatttgacggattttccccgttttgactgggtttggatatgggtatgggttttccccgattttaaaatacgagtatg 7314685  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  7314686 ggacgggtaacgggtatataggttcccaccccgaacccata 7314726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 202 - 342
Target Start/End: Complemental strand, 37106843 - 37106703
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   ||||||||||||||| ||||||||||||| |||| |||||| || || ||||| |||||||| |||| |||||||||    
T  37106843 ggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgagtttgggtatgggtatgggttttccccgatttcaaaacacgggtatg 37106744  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||| |||||||||||||||| |||||||||||    
T  37106743 ggacgggtaacgggtatataggtacccactccgaacccata 37106703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 37472706 - 37472837
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    |||||||||||   ||||||||||||||| |||||||||||||||||| ||||||||| ||  |||| |||||||| |||| ||||||||||||||||||    
T  37472706 cccgaaccaaactcaatttgacgggttttccccgttttgactgggtttgggtatgagtatggattttccccgatttcaaaacacgggtatgggacgggta 37472805  T
Q  311 acgagtatataggtacccaccccgaacccata 342  Q
    ||| |||| |||||||||||  ||||||||||    
T  37472806 acgggtatttaggtacccacttcgaacccata 37472837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 203 - 345
Target Start/End: Original strand, 12193766 - 12193908
Alignment:
Q  203 gttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgg 302  Q
    |||| |||||||| |||||   ||||||||||||||||||  |||||||||||||| ||||||||| || |||||||||||||| | || ||||||||||    
T  12193766 gttacccacccgagccaaacccaatttgacgggtttttccgattttgactgggtttgggtatgagtatgtgtttttcccgatttcagaacacgggtatgg 12193865  T
Q  303 gacgggtaacgagtatataggtacccaccccgaacccatatcc 345  Q
    ||||||||| | |||||||| |||||||| |||| ||||||||    
T  12193866 gacgggtaatgggtatatagatacccacctcgaatccatatcc 12193908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 8915856 - 8916015
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||| | |||||| || ||| || |||||  |||||||||| |||||||||||||||||| |||| | |||| || || ||||| | |    
T  8915856 gcaacaaaacccatacctgtggttatccgcccaaatcaaattcaatttgacggatttttcccgttttgactgagtttggatatgggtatgggtttt-ctc 8915954  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||| | |||| ||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  8915955 gatctcaaaacacgggtatgggacgggtaacaggtatataggtacccaccccgaacccata 8916015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 13830905 - 13830747
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||   |||||| || |||||||||||   ||||||||||||||| ||| |||||||||||||| |||||| || || ||||| | ||    
T  13830905 caacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttccccattttgactgggtttgggtatgggtatgggttttcctcg 13830806  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    || | |||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||||    
T  13830805 atctcaaaacacgggtatgggac-ggtaacgggtatataagtacccaccccgaacccata 13830747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 36128024 - 36128203
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   ||||||  |  ||||||||||  ||||||||||| |||| |||||||||||||||||| |||||| || || | ||| |||    
T  36128024 gcaacaaaacccatacccgtggttactcgtccgaaccaaacctaatttgacggattttccccgttttgactgggtttgggtatgggtatgtggtttcccc 36128123  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| |  ||| |||||||||||| |||||||| |||||||||||| ||||||||||||||| || || ||||||| ||||    
T  36128124 gatctcgaaacacgggtatgggatgggtaacgggtatataggtactcaccccgaacccatacccaaacccgtcccaaatg 36128203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 212 - 342
Target Start/End: Complemental strand, 45115701 - 45115569
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagttt--gagtttttcccgattttaaaaaacgggtatgggacgggt 309  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||| |||||| || |  ||||||| | |||||| |||| ||||||||| |||||||    
T  45115701 ccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggtatgggtatatgagttttcctcgatttcaaaacacgggtatgagacgggt 45115602  T
Q  310 aacgagtatataggtacccaccccgaacccata 342  Q
    |||  ||||||||||||||| ||||||||||||    
T  45115601 aacaggtatataggtacccatcccgaacccata 45115569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 10208349 - 10208508
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| |||||   || ||| || |||||||||||  ||||||||||| |||| |||||||||||||||||| |||||| || || ||||| |||    
T  10208349 gcaacaaaactcatacccgtgattatccgcccgaaccaaagttaatttgacgg-ttttccccgttttgactgggtttgggtatgggtatgggttttcccc 10208447  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
     || |||||| ||||||||||||||||||| |  |||||||||||| ||||||||||||||    
T  10208448 aatcttaaaacacgggtatgggacgggtaatggatatataggtacctaccccgaacccata 10208508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 183 - 373
Target Start/End: Original strand, 31942104 - 31942295
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||   |||||| || ||| |||||||   ||||||| |||||||||||| ||||||||||||| | |||| ||||| ||| | | ||    
T  31942104 caacaaaacccatacccgtggttacccgcccaaaccaaactcaatttgatgggtttttcccgctttgactgggtttggatatgggtttgggttatcctcg 31942203  T
Q  283 attttaaaaa-acgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||| ||||| ||||||||| ||||||||||  ||||||| ||||||||||| |||||||| || || | ||| | ||||||||||||||||    
T  31942204 atttcaaaaacacgggtatgagacgggtaacaggtatataagtacccaccccaaacccataaccaaacctgtcacaaatgcagaaaactact 31942295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 13705273 - 13705439
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttg------agtt 275  Q
    |||||||||| |||||  ||||||| ||  |||||||| |   ||||||||||||||| ||||||||||| |||||| |||||| || ||      ||||    
T  13705273 gcaacaaaactcatacccatggttacccgtccgaaccatacccaatttgacgggttttccccgttttgacagggtttgggtatgggtatgggtatgagtt 13705372  T
Q  276 tttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    || |||||||| |||| ||||||||| ||| ||||||| ||||||||||||||||||||||||||||    
T  13705373 ttccccgatttcaaaacacgggtatgagacaggtaacgggtatataggtacccaccccgaacccata 13705439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 182 - 373
Target Start/End: Original strand, 19104755 - 19104950
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||| |||||| |||||| | | ||||| ||||   ||||||| |||||||| ||||||||| ||||||| |||||||||||| ||||| |||    
T  19104755 gcaacaaaacctatacatgtggttaccaatccgaatcaaacccaatttgatgggttttttccgttttgattgggtttgggtatgagtttgggttttcccc 19104854  T
Q  282 gattttaaaaaacgg----gtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||||  ||| ||||    |||||||| | |||||| ||||||||||| ||||| |||| |||||  | || ||||||| ||||||||||| ||||    
T  19104855 gatttccaaacacgggcctgtatgggatgtgtaacgggtatataggtatccacctcgaatccatactcaaacccgtcccgaatgcagaaaattact 19104950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 236 - 342
Target Start/End: Complemental strand, 45256940 - 45256834
Alignment:
Q  236 tttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccga 335  Q
    ||||||||||||||||||||| | | ||||||| |||||||| |||||||| |||| ||||||||| ||||| ||| | ||||||| |||||||||||||    
T  45256940 tttttcccgttttgactgggtgtggatatgagtatgagttttccccgatttcaaaacacgggtatgagacggttaatgggtatataagtacccaccccga 45256841  T
Q  336 acccata 342  Q
    |||||||    
T  45256840 acccata 45256834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 10920809 - 10920637
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || ||||||||||||  |||||||  |||||| |||||||||||||||||| |||||| || ||  ||||| ||    
T  10920809 gcaacaaaacccatacccgtggttacccgcccgaaccaaatccaatttgataggttttccccgttttgactgggtttgggtatgggtatggattttttcc 10920710  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||| |||||||||||        |||||||||| |||||||||||||||| || |||||||||| ||||    
T  10920709 gatctcaaaacacgagtatgggacgg-------atatataggtatccaccccgaacccatacccaaatccgtcccaaatg 10920637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 38342501 - 38342597
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||||| | |||| ||||||||||| ||||||||||||| |||| || ||||||||||||| | ||||| ||||||||||||||||||||    
T  38342501 tttgattgggtttggatatgggtttgagttttccccgattttaaaatacggatacgggacgggtaacggggatatatgtacccaccccgaacccata 38342597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 6027820 - 6027967
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||   |||||| || |||||||||||   ||||||||||||||| |||||||||| ||||||| |||            ||| ||||    
T  6027820 caacaaaacccatactcgtggttatccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttgggt------------tttccccg 6027907  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||| | ||||||| ||||||||||  ||||||||||||||||||||||||||||    
T  6027908 attttaaaacatgggtatgagacgggtaacaggtatataggtacccaccccgaacccata 6027967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 342
Target Start/End: Complemental strand, 25210457 - 25210388
Alignment:
Q  273 gtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||    
T  25210457 gtttttcccgactttaaaacacgggtatgggacgggtaacgaggatatatgtacccaccccaaacccata 25210388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 37999648 - 37999475
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||    ||||||  | ||||||||||||  ||||||||||||||  ||| |||||||||||| | |||||| ||||      | |||    
T  37999648 gcaacaaaacccatatccgtggttagtcgcccgaaccaaattcaatttgacgggtttcccccattttgactgggtatgggtatgggttt------tcccc 37999555  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||||||||| ||||||||||| ||||||| ||||||||||||||| |||| || || ||||||| ||||    
T  37999554 gatctcaaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaactcatacccaaacccgtcccaaatg 37999475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 43371660 - 43371564
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||| |||| |||||  ||||||||||| ||||||||||||| ||||||| ||||||||||||| | ||||| ||||||||||| ||| ||||    
T  43371660 tttgactgagtttgggtattggtttgagttttccccgattttaaaatacgggtacgggacgggtaacggggatatatgtacccaccccaaactcata 43371564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 202 - 330
Target Start/End: Original strand, 44746047 - 44746175
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| ||||||| ||||||   ||||||||||||||| |||||||||| || |||| ||||||  |||| ||||| |||||||| |||| |||  ||||    
T  44746047 ggttacccacccgtaccaaacccaatttgacgggttttccccgttttgattgagtttgggtatggatttgggttttccccgatttcaaaacacgaatatg 44746146  T
Q  302 ggacgggtaacgagtatataggtacccac 330  Q
    |||||||||| | ||||||| ||||||||    
T  44746147 ggacgggtaatgggtatatatgtacccac 44746175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 226 - 329
Target Start/End: Complemental strand, 26755867 - 26755764
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||| |||||   ||||||||||| | |||||| |||||  ||||| | ||||| |||    
T  26755867 atttgacgggtttttcccgatttgactgggtttgggtatgagtttgggttttcttcgattttaaaatatgggtatcggacgattaacggggatatatgta 26755768  T
Q  326 ccca 329  Q
    ||||    
T  26755767 ccca 26755764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 42797919 - 42798066
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||| ||||||||||||||||| | |||||||||||||||  |||||       | |||||||    
T  42797919 gcaacaaaacccatacccgtggttacccgcccgaaccaaatctaatttgacgggttttt-ctgttttgactgggtttgagtatg-------gattttccc 42798010  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
          |||| ||||||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  42798011 -----caaaacacgggtatgagacgggtaacgggtatataagtacccaccccgaacccata 42798066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 22900921 - 22900805
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||||||||| | |  ||||||| ||| | |||||| ||||| |||||||||||||| |||| |||||||||||||| |||||| |  ||||  ||    
T  22900921 atttgacgggttttcctcactttgacttggtctgggtatgggtttgggtttttcccgatttcaaaacacgggtatgggacgagtaacggggttatatata 22900822  T
Q  326 cccaccccgaacccata 342  Q
    |||||||||||| ||||    
T  22900821 cccaccccgaactcata 22900805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 215 - 331
Target Start/End: Original strand, 37309695 - 37309810
Alignment:
Q  215 aaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacga 314  Q
    ||||||||  ||||||| |||||||||||| |||||||  |||| |||||||||||||||||||| | |||| || | | ||||||||||| | ||||||    
T  37309695 aaccaaattcaatttgatgggtttttcccgctttgactaagtttgggtatgagtttgagtttttctcaatttcaatacatgggtatgggac-gataacga 37309793  T
Q  315 gtatataggtacccacc 331  Q
    | ||||| |||||||||    
T  37309794 ggatatatgtacccacc 37309810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 226 - 313
Target Start/End: Complemental strand, 10212533 - 10212446
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    |||||||| |||||||| ||||||||||||||| |||||||||||| ||||| ||||||||  ||| |||| || ||||| |||||||    
T  10212533 atttgacgagtttttcctgttttgactgggttttggtatgagtttgggttttccccgatttccaaacacggttacgggacaggtaacg 10212446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 268 - 345
Target Start/End: Complemental strand, 3547251 - 3547174
Alignment:
Q  268 tttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcc 345  Q
    |||| |||||| ||||||| |||| ||||||| |||||||||||||   ||||| |||||||||||||||||||||||    
T  3547251 tttgggtttttaccgatttcaaaatacgggtacgggacgggtaacggagatatatgtacccaccccgaacccatatcc 3547174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 212 - 305
Target Start/End: Complemental strand, 12341741 - 12341648
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggac 305  Q
    ||||||||||   ||||||||||||||| ||||||||||||| |||| |||||| || || ||||| |||||||| |||| || ||||||||||    
T  12341741 ccgaaccaaacccaatttgacgggttttccccgttttgactgagtttgggtatgggtatgggttttccccgatttcaaaacacaggtatgggac 12341648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 15546871 - 15546755
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||| ||||| |||| ||||||||| | | || ||| ||||| ||||| |||||||| |||| ||||||||||||||||||||  |  ||||  ||    
T  15546871 atttgacgagttttccccgctttgactggatctgggcatgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacatggttatatata 15546772  T
Q  326 cccaccccgaacccata 342  Q
    ||||||| |||||||||    
T  15546771 cccaccctgaacccata 15546755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 252 - 347
Target Start/End: Original strand, 24051612 - 24051707
Alignment:
Q  252 tgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatccta 347  Q
    ||||||| |||||| ||||| | |||  |||||||||||| ||| ||||||||||||||||  | ||||| ||||| |||||||||||||| ||||    
T  24051612 tgggtttgggtatgggtttgggatttctccgattttaaaatacgagtatgggacgggtaacagggatatatgtacctaccccgaacccatacccta 24051707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 246 - 368
Target Start/End: Original strand, 35248367 - 35248489
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcc 345  Q
    ||||| || |||| |||| | ||||| ||||| | |||||  |||| ||||||||||||||||||| | | ||| |||||||||||||||||||||| ||    
T  35248367 tttgattgagtttgggtacgggtttgggttttccacgattacaaaacacgggtatgggacgggtaaaggggataaaggtacccaccccgaacccataccc 35248466  T
Q  346 taatccgtccccaatgcagaaaa 368  Q
     || ||||||  |||| ||||||    
T  35248467 aaacccgtcctgaatgtagaaaa 35248489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 14331648 - 14331538
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||||||||| |||| ||||||| ||||| |||||| ||||      | ||| |||| |||| || |||||||||||||||||| | ||||| |||    
T  14331648 atttgacgggttttccccggtttgactaggtttgggtatgggttt------tcccctatttaaaaatacaggtatgggacgggtaacggggatatatgta 14331555  T
Q  326 cccaccccgaacccata 342  Q
    ||||| |||||||||||    
T  14331554 cccactccgaacccata 14331538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 30979032 - 30978938
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||||   |||||||||| |||||||||||||| |||| ||||||| ||   || ||||||| ||||| ||| ||||||||||||||||    
T  30979032 tttgactgggtttgaatatgagtttgggtttttcccgatttcaaaatacgggtacgg--aggataacgaggatatatgtatccaccccgaacccata 30978938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 44058010 - 44057893
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||| |||||| ||  ||||||||||||| |||| |||||||  |||| || ||||| |||| || |||| ||||||||||| | | ||||| |||    
T  44058010 atttgacgagttttttccaatttgactgggtttgggtacgagtttggattttccctgatttcaaaataccggtacgggacgggtaatggggatatatgta 44057911  T
Q  326 ccca-ccccgaacccata 342  Q
    |||| |||||||||||||    
T  44057910 cccacccccgaacccata 44057893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 312
Target Start/End: Original strand, 40734533 - 40734632
Alignment:
Q  213 cgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaac 312  Q
    ||||||||||  |||||||||||||||  ||| ||||| | ||||| ||||||| |||| |||||   ||||||| ||| ||||||||| ||||||||||    
T  40734533 cgaaccaaattcaatttgacgggttttatccgctttgatttggtttgggtatgaatttgggttttcagcgattttcaaacacgggtatgagacgggtaac 40734632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 305
Target Start/End: Original strand, 34214619 - 34214698
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggac 305  Q
    |||||||||| ||||||| | ||||| |||||||  ||||||||||||||||||| | |||| |||| ||||||| |||||    
T  34214619 aatttgacggttttttcc-gctttgattgggtttttgtatgagtttgagtttttctcaatttcaaaacacgggtacgggac 34214698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 13954852 - 13954802
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgg 296  Q
    ||||||||||||| |||||| |||||| |||| ||||||||||||| ||||    
T  13954852 tttgactgggtttgggtatgtgtttgaattttccccgattttaaaacacgg 13954802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 296
Target Start/End: Complemental strand, 14096059 - 14096009
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgg 296  Q
    ||||||||||||| |||||| |||||| |||| ||||||||||||| ||||    
T  14096059 tttgactgggtttgggtatgtgtttgaattttccccgattttaaaacacgg 14096009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 300
Target Start/End: Original strand, 18106037 - 18106155
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataattt-gacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||| |||| || |||||| || |||||| ||||   ||||| ||||| |||| |||||||||||||||||| | |||| || || ||||| |||    
T  18106037 caacaaaactcatatatgtggttacccgcccgaatcaaactcaattttgacggattttccccgttttgactgggtttggatatgggtatgggttttcccc 18106136  T
Q  282 gattttaaaaaacgggtat 300  Q
    ||| | |||| ||||||||    
T  18106137 gatctcaaaacacgggtat 18106155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 330
Target Start/End: Complemental strand, 33175302 - 33175252
Alignment:
Q  280 ccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccac 330  Q
    |||||||||||| ||||||| ||| |||||| || ||||||||||||||||    
T  33175302 ccgattttaaaacacgggtacgggtcgggtagcgtgtatataggtacccac 33175252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 281 - 342
Target Start/End: Complemental strand, 18485720 - 18485659
Alignment:
Q  281 cgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||| |||||||  | |||||||||| | ||||| |||||||||| |||||||||    
T  18485720 cgattttaaaatacgggtacagtacgggtaacggggatatatgtacccaccctgaacccata 18485659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 368
Target Start/End: Complemental strand, 35965420 - 35965320
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    ||||||||||| |||||||| |||| |||||||||| | | |||| | | ||| | |||||||| ||||||||||| || || ||||||| |||| ||||    
T  35965420 gtttgagttttccccgatttcaaaacacgggtatgg-atgtgtaatggggatacatgtacccactccgaacccatacccaaacccgtcccgaatgtagaa 35965322  T
Q  367 aa 368  Q
    ||    
T  35965321 aa 35965320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 2e-40; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 201 - 373
Target Start/End: Original strand, 43113563 - 43113735
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| ||||||||||||||   ||||| ||||||||| || | |||||||||||||  ||||||| ||| |||||||||||||| |||| ||||| ||    
T  43113563 tggttacccacccgaaccaaacccaatttaacgggttttccctgctttgactgggtttgcgtatgagattgggtttttcccgatttcaaaacacgggcat 43113662  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||||||||||  ||||||||||||||||||||||| |||| || |||||||| | ||||||||||||||||    
T  43113663 gggacgggtaacaggtatataggtacccaccccgaactcatacccaaatccgtctcgaatgcagaaaactact 43113735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 32303231 - 32303052
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||| ||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||    
T  32303231 gcaacaaaacccatacccgtggttacccgcccgaaacaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttcccc 32303132  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| |  ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| || || ||||||| ||||    
T  32303131 gatctcgaaacacgggtatgggacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 32303052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 29108770 - 29108900
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||||||||||||||||| | |||||||||||||||||    
T  29108770 ccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggtttttcccgattttaaaacatgggtatgggacgggtaa 29108869  T
Q  312 cgagtatataggtacccaccccgaacccata 342  Q
    || ||||||| ||||||||||||||||||||    
T  29108870 cgggtatatatgtacccaccccgaacccata 29108900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 202 - 342
Target Start/End: Complemental strand, 27932563 - 27932423
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| |||||||| |||| |||||||||    
T  27932563 ggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttccccgatttcaaaacacgggtatg 27932464  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||||| ||||||||||||||||||||||||||||    
T  27932463 ggacgagtaacgggtatataggtacccaccccgaacccata 27932423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 24928119 - 24927928
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || |||||||||||   ||||||||||||||| |||||||||||||||||| |||||| || || ||||| ||     
T  24928119 gcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttccct 24928020  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |  ||| ||||||||| ||||||||||| |||||||||||||||||||||||||||| || || ||||||| |||| | |||||||||    
T  24928019 gatctcgaaacacgggtatgagacgggtaacgggtatataggtacccaccccgaacccatacccaaacccgtcccaaatgtaaaaaactact 24927928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 182 - 368
Target Start/End: Complemental strand, 20399762 - 20399576
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||| ||||   |||||| || | |||||||||   ||||||||| ||||| |||||||||||||||||| |||||| ||||| |||||  ||    
T  20399762 gcaacaaaaccaatacccgtggttacccgctcgaaccaaacccaatttgacgagttttccccgttttgactgggtttgggtatgggtttgggttttctcc 20399663  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    ||||| |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||  || || ||||||| |||||| ||||    
T  20399662 gatttcaaaacacgggtatgggacgggtaacgggtatatagatacccaccccgaacccattcccaaacccgtcccgaatgcaaaaaa 20399576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 203 - 361
Target Start/End: Original strand, 37960901 - 37961059
Alignment:
Q  203 gttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgg 302  Q
    |||| ||||||||||| ||  |||||||| |||||||||||||||||||| ||||| |||||||||||| ||||| |||||||| |||| ||||||||||    
T  37960901 gttacccacccgaaccgaacctaatttgatgggtttttcccgttttgactaggtttgggtatgagtttgggttttccccgatttaaaaacacgggtatgg 37961000  T
Q  303 gacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| ||||||  |||||||||||| |||||||||| |||| || || ||||||| ||||    
T  37961001 gacaggtaacaggtatataggtacacaccccgaactcatacccaaacccgtcccaaatg 37961059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 318
Target Start/End: Original strand, 5858570 - 5858706
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||| |||||| | |||||| | |||||||||||||  ||||||||||||||| |||||||||| ||||||| |||||| ||||| |||||||||    
T  5858570 gcaacaaaatccatacctgtggttacctacccgaaccaaatccaatttgacgggttttccccgttttgattgggtttgggtatgggtttgggtttttccc 5858669  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtat 318  Q
    ||||| |||| ||||||||||||||||||||| ||||    
T  5858670 gatttaaaaacacgggtatgggacgggtaacgggtat 5858706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 24869943 - 24870102
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||| ||  | ||||| || | |||| |||||  |||||||||||||||||||||||||||||  ||| ||||||  | |||||||| ||||    
T  24869943 caacaaaacccacacccacggttatccgctcgaatcaaatccaatttgacgggtttttcccgttttgactgaatttgggtatggctatgagttttccccg 24870042  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||| ||||||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  24870043 attttaaaacacgggtatgtgacgggtaacgggtatataggtacccaccccgagcccata 24870102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 183 - 373
Target Start/End: Complemental strand, 24569106 - 24568917
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| ||||||| || ||| | | ||||||||||  |||||||||||||||| ||||||| || |||||||||||||| || ||  |||||||||    
T  24569106 caacaaaacacatacatgtgattatctatccgaaccaaacctaatttgacgggttttccccgttt-gattgggtttaggtatgggtatggatttttcccg 24569008  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||| | || | ||||||||||| |||| || ||||||||||| ||||||||||||||||  | |||||||||| |||| |||||||||||    
T  24569007 atttcacaacatgggtatgggacaggtagcgggtatataggtatccaccccgaacccatactcaaatccgtcccgaatggagaaaactact 24568917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 361
Target Start/End: Original strand, 40248332 - 40248468
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||||||||||||||||||||||||||| |||||| || |  ||||| |||||||| |||| ||||||||| ||||| ||||| ||||||||||    
T  40248332 aatttgacgggtttttcccgttttgactgggtttgggtatgggtatatgttttccccgatttcaaaacacgggtatgagacggataacgggtatataggt 40248431  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||||| |||||||||||| ||  ||||||||| ||||    
T  40248432 acccatcccgaacccatacccatatccgtcccaaatg 40248468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 225 - 345
Target Start/End: Complemental strand, 45236192 - 45236072
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| ||||||||||||| ||||  ||||| || |||||||| || ||||| |||| ||||||||||||||||||| | ||||||||||    
T  45236192 aatttgacgggttttccccgttttgactgagtttgagtatgggtatgagttttccctgatttcaaaacacgggtatgggacgggtaatgggtatataggt 45236093  T
Q  325 acccaccccgaacccatatcc 345  Q
    |||||||||||||||||||||    
T  45236092 acccaccccgaacccatatcc 45236072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 181 - 329
Target Start/End: Original strand, 4230647 - 4230795
Alignment:
Q  181 agcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcc 280  Q
    |||||||||| |||||||| |||||| || |||||||||||   ||||||||||||||| ||| |||||||||||||| |||||| || || ||||| ||    
T  4230647 agcaacaaaatccatacatgtggttacccgcccgaaccaaacccaatttgacgggttttccccattttgactgggtttgggtatgggtatgggttttccc 4230746  T
Q  281 cgattttaaaaaacgggtatgggacgggtaacgagtatataggtaccca 329  Q
    |||| | |||| || ||||||||||| |||||| |||||||||||||||    
T  4230747 cgatctcaaaacacaggtatgggacgagtaacgggtatataggtaccca 4230795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 225 - 333
Target Start/End: Complemental strand, 35215662 - 35215555
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||| |||||||||||||||||| |||||| ||||||| |||| ||||| |||||||| |||| ||||||||| ||||||||||||||||||||||    
T  35215662 aatttgaccggtttttcccgttttgaccgggtttgggtatgattttgggtttt-cccgatttcaaaacacgggtatgagacgggtaacgagtatataggt 35215564  T
Q  325 acccacccc 333  Q
    |||||||||    
T  35215563 acccacccc 35215555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 201 - 368
Target Start/End: Complemental strand, 1012769 - 1012603
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    |||||| ||||||||| ||||   ||||||||||||||| | |||||||| || |||| |||||||||||| ||||| |||||||| |||| | | ||||    
T  1012769 tggttacccacccgaatcaaacccaatttgacgggttttcctcgttttgattgagtttgggtatgagtttgggttttccccgattt-aaaacatgagtat 1012671  T
Q  301 gggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    ||||||||||| | |||||||||||||||||||||||||||| || ||  |||||| |||||| ||||    
T  1012670 gggacgggtaatgggtatataggtacccaccccgaacccatacccaaactcgtcccgaatgcaaaaaa 1012603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 27777146 - 27777276
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||  ||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||||| |||| || |||| ||||| |||||    
T  27777146 ccgaaccaaacttaatttgacgggttttctccgttttgactgggtttgggtatgtgtttgagtttttcccgatttcaaaacacaggtacgggacaggtaa 27777245  T
Q  312 c-gagtatataggtacccaccccgaacccata 342  Q
    | ||| ||| ||||||||||||||||||||||    
T  27777246 cagag-atacaggtacccaccccgaacccata 27777276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 17469413 - 17469234
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   | |||| ||||||||||||||   |||||||||| |||| |||||||||||||||||| |||            ||| |||    
T  17469413 gcaacaaaacccatacccgtagttacccacccgaaccaaacccaatttgacggattttccccgttttgactgggtttgggt------------tttcccc 17469326  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||| |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||| || || ||||||| | ||||||||||||||    
T  17469325 gatttcaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaacccatacccaaacccgtcccaactgcagaaaactact 17469234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 212 - 342
Target Start/End: Original strand, 39445524 - 39445654
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||   |||||||||| |||| |||||||||||| ||||| |||||| || || |||||||||||||| |||| ||||||||||||| |||||    
T  39445524 ccgaaccaaactcaatttgacggattttccccgttttgactaggtttgggtatgggtatgggtttttcccgatttcaaaacacgggtatgggacaggtaa 39445623  T
Q  312 cgagtatataggtacccaccccgaacccata 342  Q
    || || |||||||||||||||||||| ||||    
T  39445624 cgggtttataggtacccaccccgaactcata 39445654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 208 - 341
Target Start/End: Original strand, 29416131 - 29416263
Alignment:
Q  208 ccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgg 307  Q
    |||||||||||||||  ||||||||||||||| ||||||||||||| |||| ||||||||||||| |||||| | | ||||||| ||| |||  ||| ||    
T  29416131 ccacccgaaccaaatccaatttgacgggttttccccgttttgactgagtttgggtatgagtttgactttttctcta-tttaaaacacgagtaaaggatgg 29416229  T
Q  308 gtaacgagtatataggtacccaccccgaacccat 341  Q
    |||||||| ||||| |||||||||||||||||||    
T  29416230 gtaacgaggatatatgtacccaccccgaacccat 29416263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 183 - 345
Target Start/End: Original strand, 17084032 - 17084188
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||||||||| | ||| || |||||||||||||||  || |||||||||||| |||| |||||||||||||     ||| |||| |||||  |||    
T  17084032 caacaaaacccatacttgtgggtacccacccgaaccaaattcaagttgacgggttttccccgctttgactgggttt-----tga-tttgggttttctccg 17084125  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcc 345  Q
    ||||||||| ||||||| | ||||||||||| | |||||| |||||||||||||| |||||||    
T  17084126 attttaaaacacgggtacgagacgggtaacggggatatagatacccaccccgaactcatatcc 17084188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 356
Target Start/End: Complemental strand, 1063683 - 1063503
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggt------atgagtttgagtt 275  Q
    |||||||||| |||||   |||||| || |||||||||||    |||||||||||||| |||||||||||||||| | |||      ||| || || |||    
T  1063683 gcaacaaaactcatacccgtggttacccgcccgaaccaaacccgatttgacgggttttccccgttttgactgggtgtgggtgtgggtatgggtatgggtt 1063584  T
Q  276 tttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccc 356  Q
    ||||||||||| |||| ||||||||||||||| ||||| ||||||| ||||||||||||||| |||| || ||||| ||||    
T  1063583 tttcccgatttcaaaacacgggtatgggacggttaacgggtatataagtacccaccccgaactcatacccaaatccatccc 1063503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 227 - 342
Target Start/End: Complemental strand, 28345616 - 28345501
Alignment:
Q  227 tttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtac 326  Q
    |||||||||||||||||| ||||||||||||| |||||  |||||  |||| |||||||  |||| |||||||  ||| |||||||||| ||||||| ||    
T  28345616 tttgacgggtttttcccgctttgactgggtttcggtataggtttggattttacccgattccaaaacacgggtacaggatgggtaacgaggatataggcac 28345517  T
Q  327 ccaccccgaacccata 342  Q
    ||||||||||||||||    
T  28345516 ccaccccgaacccata 28345501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 30481368 - 30481499
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    |||||||||||  ||| |||| || |||| || ||||||| |||||||  ||||||||||| |||||||| ||||| |||| ||| ||||| |||| |||    
T  30481368 cccgaaccaaacctaaattgatggattttccctgttttgattgggtttgagtatgagtttgggtttttcctgatttcaaaatacgagtatgagacgagta 30481467  T
Q  311 acgagtatataggtacccaccccgaacccata 342  Q
    | ||| ||||||||||||||||||||||||||    
T  30481468 atgaggatataggtacccaccccgaacccata 30481499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 225 - 368
Target Start/End: Complemental strand, 34139573 - 34139432
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| | |||||||||||||||| |||||| ||||| ||||| |||||||| |||| |||| ||| ||||  |||||  ||||||||||    
T  34139573 aatttgacgggttttcctcgttttgactgggtttgggtatgtgtttg-gttttccccgatttaaaaacacggatataggacatgtaacaggtatataggt 34139475  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    |||||||||||| ||||| || || ||||||| |||||| ||||    
T  34139474 acccaccccgaa-ccatacccaaacccgtcccgaatgcaaaaaa 34139432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 212 - 361
Target Start/End: Complemental strand, 34777200 - 34777057
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||   ||||| |||||||||||||||||||||||||||| |||||| ||||      |||||||| | |||| |||||||||| ||| ||||    
T  34777200 ccgaaccaaacccaatttaacgggtttttcccgttttgactgggtttgggtatgggttt------ttcccgatctcaaaacacgggtatggaacgagtaa 34777107  T
Q  312 cgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    |  |||| ||||||||||||||||||||||| || ||||| |||| ||||    
T  34777106 caggtatttaggtacccaccccgaacccatacccaaatccatcccaaatg 34777057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 225 - 321
Target Start/End: Complemental strand, 14155659 - 14155563
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatata 321  Q
    ||||||||||||||| |||| | ||||||||||| |||||||||||| |||||||||||||| |||| ||||||||  || |||||||||| |||||    
T  14155659 aatttgacgggttttccccggtatgactgggtttgggtatgagtttgggtttttcccgatttcaaaacacgggtataagatgggtaacgaggatata 14155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 213 - 339
Target Start/End: Complemental strand, 17220851 - 17220725
Alignment:
Q  213 cgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaac 312  Q
    ||||||||||  ||||||||||||||| ||| ||||||||| |||| |||||| || ||  |||| |||||||| |||| |||||||||||| || | |     
T  17220851 cgaaccaaatccaatttgacgggttttccccattttgactgagtttgggtatgggtatggattttccccgatttcaaaacacgggtatgggatggatgat 17220752  T
Q  313 gagtatataggtacccaccccgaaccc 339  Q
    |  ||||||||||||||||||||||||    
T  17220751 ggttatataggtacccaccccgaaccc 17220725  T

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Target: chr8; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 11254934 - 11255086
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||||  ||||| |   |||||||||||  |||||||||||||||| ||||||||||| ||||| ||||||       | ||||||||    
T  11254934 caacaaaacccatacatgcggttacctgtccgaaccaaatccaatttgacgggttttttccgttttgactaggtttgggtatg-------ggttttcccg 11255026  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
     |||  ||| ||||||||||||||| ||||  ||||||||||||||||  ||||||||||    
T  11255027 ctttccaaacacgggtatgggacggataacaggtatataggtacccactacgaacccata 11255086  T

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Target: chr8; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 226 - 311
Target Start/End: Original strand, 15173842 - 15173927
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||||||  | | ||||||||||||| |||||| |||||||||||||||||||| |||| ||||||| |||||||||||    
T  15173842 atttgacgggttttctctgatttgactgggtttgggtatgtgtttgagtttttcccgatttcaaaatacgggtacgggacgggtaa 15173927  T

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Target: chr8; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 15068550 - 15068665
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||||||||| |||| ||||||||||| | |||||| ||| | ||||| |||||||| |||| ||||||| ||||| ||||||| | ||||| |||    
T  15068550 atttgacgggttttccccgatttgactgggtctgggtatgggttcgggttttccccgatttcaaaatacgggtacgggacaggtaacg-ggatatatgta 15068648  T
Q  326 cccaccccgaacccata 342  Q
     ||||||||||||||||    
T  15068649 tccaccccgaacccata 15068665  T

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Target: chr8; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 27056517 - 27056633
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||||||||| | || |||| |||||||| | |||| ||||| |||||||||||||| |||  || |||||||||||||||||| |  ||||  ||    
T  27056517 atttgacgggttttcctcgctttggctgggtttggttatgggtttgggtttttcccgatttcaaagtacaggtatgggacgggtaacggggttatatcta 27056616  T
Q  326 cccaccccgaacccata 342  Q
    |||||||||||||||||    
T  27056617 cccaccccgaacccata 27056633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 211 - 342
Target Start/End: Complemental strand, 29918748 - 29918617
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggta 310  Q
    ||||||||||||  ||  ||||| |||||||| | ||||||||| ||| ||||||||||||||||||||||||||| |||| ||  |||  | |||||||    
T  29918748 cccgaaccaaattcaaactgacgagtttttcctgctttgactggttttgggtatgagtttgagtttttcccgatttcaaaacacatgtacagaacgggta 29918649  T
Q  311 acgagtatataggtacccaccccgaacccata 342  Q
    || |  ||||| |||||||||||||| |||||    
T  29918648 acaaagatatatgtacccaccccgaaaccata 29918617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 267 - 368
Target Start/End: Complemental strand, 14186405 - 14186304
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    ||||||||||||| |||||| |||| |||||||||||| ||||||||  ||||||||||| ||||| ||||||||| || || ||||||  |||| ||||    
T  14186405 gtttgagtttttctcgatttcaaaacacgggtatgggatgggtaacggatatataggtactcaccctgaacccatacccaaacccgtcctgaatgtagaa 14186306  T
Q  367 aa 368  Q
    ||    
T  14186305 aa 14186304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 225 - 329
Target Start/End: Original strand, 6388477 - 6388581
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||| |||  |||||||||||| |||| |||||| ||||| || || ||||||||||||| |||||||   ||||||||||| | ||||||||    
T  6388477 aatttgacgggctttctccgttttgactgagtttgggtatgggtttgggtcttccccgattttaaaacacgggtacaagacgggtaacggggatataggt 6388576  T
Q  325 accca 329  Q
    |||||    
T  6388577 accca 6388581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 2075915 - 2075868
Alignment:
Q  295 gggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2075915 gggtatgggacgggtaacgggtatataggtacccaccccgaacccata 2075868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 212 - 361
Target Start/End: Complemental strand, 5700484 - 5700347
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||  || |||||||||||||| ||||||||||||||||||            ||||||||||||||| |||| || |||||| ||| |||||    
T  5700484 ccgaaccaaacctattttgacgggttttttccgttttgactgggttta------------agtttttcccgatttcaaaacacaggtatgagactggtaa 5700397  T
Q  312 cgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    || | |||||| |||||||| |||||||||| || ||||| |||| ||||    
T  5700396 cggggatatagatacccacctcgaacccatacccaaatccatcccgaatg 5700347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 208 - 332
Target Start/End: Original strand, 32392330 - 32392454
Alignment:
Q  208 ccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgg 307  Q
    |||||||||||||    ||||||| |||||||||||| ||| | ||||||| ||||||  |||| ||||||| |||||| |||| ||| ||||||||| |    
T  32392330 ccacccgaaccaaccccaatttgatgggtttttcccgctttaaatgggttttggtatggatttgggtttttctcgatttcaaaacacgagtatgggacag 32392429  T
Q  308 gtaacgagtatataggtacccaccc 332  Q
     ||| ||| ||||| ||||||||||    
T  32392430 ataatgagaatatatgtacccaccc 32392454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 260 - 342
Target Start/End: Original strand, 8545345 - 8545427
Alignment:
Q  260 ggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||||| |||||  ||||||| |||| |||||||||| ||| |||||| | |||||| |||||||||||||||||||    
T  8545345 ggtataagtttgggttttctccgatttcaaaacacgggtatggaacgagtaacggggatatagatacccaccccgaacccata 8545427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 14687526 - 14687409
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||| |||||||| |||  ||||| ||||||| ||||||  |||| ||||| |||||||| |||| || ||||||||||| | |||  | ||||| ||    
T  14687526 aatttggcgggttttccccactttgattgggtttgggtatggatttgggttttccccgatttcaaaacacaggtatgggacgagaaacagggatatatgt 14687427  T
Q  325 acccaccccgaacccata 342  Q
    | ||||||||||||||||    
T  14687426 atccaccccgaacccata 14687409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 267 - 367
Target Start/End: Original strand, 36131920 - 36132020
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    ||||||||||| ||| |||| |||| ||| |||||||| |||||| | | ||| ||||| ||||||||||| ||||  | |||||||||| |||||||||    
T  36131920 gtttgagttttcccctatttcaaaacacgagtatgggatgggtaaagggcatacaggtatccaccccgaactcatacacaaatccgtcccgaatgcagaa 36132019  T
Q  367 a 367  Q
    |    
T  36132020 a 36132020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 303
Target Start/End: Original strand, 2075795 - 2075873
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatggg 303  Q
    |||||||||| ||||  ||||||||||||||||| |||||| || || |||||||||||| | |||| | |||||||||    
T  2075795 aatttgacggattttctccgttttgactgggtttgggtatgggtatgggtttttcccgatctcaaaacatgggtatggg 2075873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 2183588 - 2183684
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||||||||||||||||||  ||||  ||||||| |||| ||||||| | ||  ||||| |   ||||| ||||||||||||||| ||||    
T  2183588 tttgactgggtttaggtatgagtttggattttctccgatttcaaaatacgggtacgagagaggtaatggagatatatgtacccaccccgaactcata 2183684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 342
Target Start/End: Complemental strand, 10297584 - 10297468
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||||||||| || | ||| | ||||||| | | ||| |||| ||||| |||||||| |||| ||||| | ||||| ||||||| | ||||| |||    
T  10297584 atttgacgggttttccctgattttattgggtttggatgtgaatttgggttttccccgatttcaaaatacggggacgggacaggtaacggggatatatgta 10297485  T
Q  326 cccaccccgaacccata 342  Q
    || |||| |||||||||    
T  10297484 cctaccctgaacccata 10297468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 33631856 - 33631900
Alignment:
Q  209 cacccgaaccaaatataatttgacgggtttttcccgttttgactg 253  Q
    |||||||||||||| ||| ||||||||||||||||| ||||||||    
T  33631856 cacccgaaccaaatctaaattgacgggtttttcccgctttgactg 33631900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 342
Target Start/End: Original strand, 9642354 - 9642429
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| ||||| |||||||| |||| ||||||||||||||||||||| |  ||||  || ||| ||||||||||||    
T  9642354 gtttgggttttccccgatttcaaaacacgggtatgggacgggtaacggggttatatatatccatcccgaacccata 9642429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 338
Target Start/End: Complemental strand, 34021576 - 34021490
Alignment:
Q  252 tgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacc 338  Q
    |||||||  |||||||||| |||||| | ||||||||||| |||| ||||| ||| |||||  | |||||||||| |||||| ||||    
T  34021576 tgggtttgagtatgagtttaagttttccacgattttaaaatacggatatggaacgagtaacaggaatataggtacacaccccaaacc 34021490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 2e-40; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 12866470 - 12866630
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||||| |||||| ||  |||||||||||  ||||||||||||||| ||| |||||||||||||| |||||| || ||||||||  ||    
T  12866470 gcaacaaaacccatacatgtggttacccgtccgaaccaaatccaatttgacgggttttccccattttgactgggtttgggtatgggtatgagttttctcc 12866569  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| | ||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  12866570 gatttcaaaacatgggtatgggacgggtaacaggtatataggtacccaccgcgaacccata 12866630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 361
Target Start/End: Complemental strand, 4920996 - 4920817
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   |||||||||||||||  ||||||||||||||||| | |||| || || ||||| |||    
T  4920996 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacgggttttctccgttttgactgggtttggttatgggtatgggttttcccc 4920897  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||||||||||||||||||||| ||||||||||| |||||||||||||||| || || ||||||| ||||    
T  4920896 gatctcaaaacacgggtatgggacgggtaacgggtatataggtatccaccccgaacccatacccaaacccgtcccaaatg 4920817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 182 - 342
Target Start/End: Complemental strand, 40517976 - 40517816
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || || |||||||||  |||||||||| ||||||||||||||||||||||| |||||| || || ||||| |||    
T  40517976 gcaacaaaacccatacccgtggttacccgcctgaaccaaattcaatttgacggatttttcccgttttgactgggtttgggtatgggtatgggttttcccc 40517877  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||   |||| |||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  40517876 gatcccaaaacacgggtatgggatgggtaacgggtatatagttacccaccccgaacccata 40517816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 15890375 - 15890217
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||    ||||| || ||||||||||||  |||||||||||||||||||||||||||| ||||| | |||| || || |||||  |||    
T  15890375 caacaaaacccatactcgcggttacccgcccgaaccaaatccaatttgacgggtttttcccgttttgactaggtttggctatgtgtatgggttttctccg 15890276  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  15890275 atttcaaaacacgggtatgggacgggtaacgggtatataggtaccca-cccgaacccata 15890217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 227 - 342
Target Start/End: Complemental strand, 38973047 - 38972932
Alignment:
Q  227 tttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtac 326  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| | ||||||||||  ||||||| | ||||||||||    
T  38973047 tttgacaggttttccccgttttgactgggtttaggtatgagtttgggtttttcccgatttcaaaacatgggtatgggataggtaacgggaatataggtac 38972948  T
Q  327 ccaccccgaacccata 342  Q
    ||||||||||||||||    
T  38972947 ccaccccgaacccata 38972932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 182 - 340
Target Start/End: Original strand, 13401923 - 13402081
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || |||||||||||   |||||||||| ||||| ||||||||||| ||||| |||||| || ||||||||||||    
T  13401923 gcaacaaaacccatacccgcggttacccgcccgaaccaaacccaatttgacggattttttccgttttgactaggtttgggtatgggtatgagtttttccc 13402022  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaaccca 340  Q
    |||||| ||| |||||||||| |||||||||| |||| ||||||||||| |||||||||    
T  13402023 gattttcaaacacgggtatggaacgggtaacgggtatttaggtacccactccgaaccca 13402081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 20973415 - 20973575
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||    ||||| || |||||||||||   | | ||||||||||| |||||||||||||||||| | |||| || || ||||| |||    
T  20973415 gcaacaaaacccatacccgcggttacccgcccgaaccaaacccattctgacgggttttccccgttttgactgggtttggttatgggtatgggttttcccc 20973514  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||| ||| |||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  20973515 gattttcaaacacgggtatgggatgggtaacgggtatataggtacccaccccgaacccata 20973575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 373
Target Start/End: Complemental strand, 18207188 - 18206998
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| |||||   |||||| |||||| |||||||   ||||||||| |||||||||||||||||||||||| || ||||||||| ||||| | |    
T  18207188 gcaacaaaactcatacccgtggttacccacccaaaccaaacccaatttgacgtgtttttcccgttttgactgggtttgggcatgagtttgggttttcctc 18207089  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||| ||||  || ||||||||| ||||||  ||||||||||||||| ||||||||||||| | || ||||||| |||| |||||| ||||    
T  18207088 gatttcaaaactcgtgtatgggacaggtaacaggtatataggtaccca-cccgaacccatattcaaacccgtcccgaatgtagaaaattact 18206998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 337
Target Start/End: Complemental strand, 30996765 - 30996611
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||||||||  || ||||| ||  ||||||||||   |||||||||| |||| |||||||||||||||||| ||||||||| || |||||  ||    
T  30996765 gcaacaaaacccatatctacggttatccgtccgaaccaaacccaatttgacggatttt-cccgttttgactgggtttgggtatgagtatgggttttctcc 30996667  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaac 337  Q
    |||||||||| ||| ||||||||| ||||||| |||||||||||||||||||||||    
T  30996666 gattttaaaacacgagtatgggacaggtaacgggtatataggtacccaccccgaac 30996611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 202 - 342
Target Start/End: Complemental strand, 4583269 - 4583129
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || |||||||||||   ||||||||||||||| |||||||||| ||||||| | |||| || || ||||| |||||||| |||| |||||||||    
T  4583269 ggttacccgcccgaaccaaacccaatttgacgggttttccccgttttgattgggtttggatatgggtatgggttttccccgatttcaaaacacgggtatg 4583170  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||| |||||||||| |||||||| ||||||||    
T  4583169 ggacgggtaacgggtatataggttcccaccccaaacccata 4583129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 183 - 361
Target Start/End: Complemental strand, 10127243 - 10127072
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||| ||||||   |||||| || ||||||||||||  ||||||||||||||| |||||||||||||||||| |||||| || || ||||| ||||    
T  10127243 caacaaaatccatacccgtggttatccgcccgaaccaaatccaatttgacgggttttccccgttttgactgggtttgggtatgggtatgggttttccccg 10127144  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    || | |||| |||||||||||||||       |||||||||||||||||||||||||||| || || ||||||| ||||    
T  10127143 atctcaaaacacgggtatgggacgg-------gtatataggtacccaccccgaacccatacccaaacccgtcccaaatg 10127072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 5908607 - 5908786
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||| ||||||   |||||| || |||||||||||   ||||||||||||||| ||| |||||| ||||||| |||||| || |||||||| |||    
T  5908607 gcaacaaaatccatacccgtggttatccgcccgaaccaaacccaatttgacgggttttccccattttgattgggtttgggtatgggtatgagttttcccc 5908706  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| |  ||| ||||||||||||||||||||| ||||||| |||| |||||| |||||||| || || ||||||| ||||    
T  5908707 gatctcgaaacacgggtatgggacgggtaacgggtatatatgtacacaccccaaacccatacccaaacccgtcccaaatg 5908786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 183 - 342
Target Start/End: Original strand, 29245871 - 29246030
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||    ||||| || |||||||||||   ||||||||||||||| |||||||||||| ||||| |||||| || ||||||||  |||    
T  29245871 caacaaaacccatacccgcggttacccgcccgaaccaaactcaatttgacgggttttccccgttttgactaggtttgggtatgggtatgagttttctccg 29245970  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||| ||||||||||||||  ||||  ||||||||||||||||||| ||||||||    
T  29245971 atttcaaaacacgggtatgggacgaataacatgtatataggtacccaccccaaacccata 29246030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 184 - 342
Target Start/End: Original strand, 12834495 - 12834653
Alignment:
Q  184 aacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccga 283  Q
    |||||||||||||||| |||||| ||  ||||||||||   ||||||||||||||| ||| |||||||||||||| |||||| || || |||||  || |    
T  12834495 aacaaaacccatacatgtggttacccgtccgaaccaaactcaatttgacgggttttccccattttgactgggtttgggtatgggtatgggttttctccaa 12834594  T
Q  284 ttttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||| |||| | || |||||||||||||||  ||||||||||||| ||||||||||||||    
T  12834595 tttcaaaacatggatatgggacgggtaacaggtatataggtacctaccccgaacccata 12834653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 28568984 - 28569100
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||||||||||| || | ||||||||||||| ||||||||||||  |||| |||||||| ||||  |||||| ||||||||||||| | |||||||||    
T  28568984 atttgacgggttttccctgatttgactgggtttgggtatgagtttggattttccccgatttcaaaatgcgggtacgggacgggtaacggggatataggta 28569083  T
Q  326 cccaccccgaacccata 342  Q
    |||||||||||||||||    
T  28569084 cccaccccgaacccata 28569100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 182 - 361
Target Start/End: Original strand, 22694821 - 22694999
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   ||||||||||  |||||||||||| ||||||||| |||||| || || ||||  |||    
T  22694821 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacggaattttcccgttttaactgggtttgggtatgggtatgggtttc-ccc 22694919  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||| | |||| ||||||||||||||  ||||| ||||| |||||||||||||||||||||| || || ||||||| ||||    
T  22694920 gatctcaaaatacgggtatgggacgactaacgggtatagaggtacccaccccgaacccatacccaaacccgtcccaaatg 22694999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 182 - 333
Target Start/End: Original strand, 33727920 - 33728071
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||||||||||   |||||| || |||||||||||   |||||||||| |||| |||||||||| ||||||| | |||| || ||  |||| |||    
T  33727920 gcaacaaaacccatacccgtggttacccgcccgaaccaaacccaatttgacggattttccccgttttgattgggtttggatatgggtatggattttcccc 33728019  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccacccc 333  Q
    ||| | |||| ||||||||||||||||||||| |||||||||||||||||||    
T  33728020 gatctcaaaacacgggtatgggacgggtaacgggtatataggtacccacccc 33728071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 182 - 342
Target Start/End: Original strand, 6155839 - 6155997
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||||| ||||| |  ||||| ||||||| |||||||  ||||| |||||||||   |||||||||||||||| |||||| ||||| ||||| |||    
T  6155839 gcaacaaaactcatacctgcggttatccacccgtaccaaatcaaatttaacgggttttcttcgttttgactgggtttgggtatgtgtttgggttttcccc 6155938  T
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||| |||||||| |||| |||||   ||||||| ||||||||||||||||||||    
T  6155939 gatttcaaaacacgggtataggacaggtaa--ggtatatatgtacccaccccgaacccata 6155997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 214 - 343
Target Start/End: Original strand, 16311244 - 16311373
Alignment:
Q  214 gaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    ||||||||  ||||||||||| ||||||||| ||||| ||||||| | ||||||||||||||||| ||||||| |||| ||| ||| | ||||| ||||     
T  16311244 gaaccaaacctaatttgacggttttttcccgctttgattgggtttggatatgagtttgagttttttccgatttcaaaacacgagtacgagacggataaca 16311343  T
Q  314 agtatataggtacccaccccgaacccatat 343  Q
     | |||||||||||||||||||||||||||    
T  16311344 gggatataggtacccaccccgaacccatat 16311373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 212 - 361
Target Start/End: Original strand, 42987428 - 42987577
Alignment:
Q  212 ccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    |||||||||||  |||||| |||||||||||||||||||||| |||| |||| | || ||  |||| |||||| | |||| |||||||||||||| ||||    
T  42987428 ccgaaccaaattcaatttggcgggtttttcccgttttgactgagtttgggtacgggtatggattttccccgatctcaaaacacgggtatgggacgtgtaa 42987527  T
Q  312 cgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||  |||||||||||||| |||||||||||| || || ||||||| ||||    
T  42987528 cggatatataggtacccatcccgaacccatacccaaacccgtcccaaatg 42987577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 202 - 342
Target Start/End: Original strand, 17853232 - 17853371
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| ||||| ||||||||  |||||||||||||||| |||||||||| ||||||| ||||||  | || ||||| ||||| ||| ||| |||||||||    
T  17853232 ggttacccacctgaaccaaacctaatttgacgggttttccccgttttgattgggtttgggtatggatatgggttttccccga-tttcaaacacgggtatg 17853330  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||||  ||||||| ||||||| |||||||||||    
T  17853331 ggacgggtaacggatatatagatacccactccgaacccata 17853371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 6369864 - 6369706
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| ||||  |||||||| || | |||||||||  ||||||||||| |||||| |||||||| || |||| || ||| || |||||||| || |    
T  6369864 caacaaaactcatatttatggttacccgctcgaaccaaacctaatttgacggttttttctcgttttgattgagtttgggcatgggtatgagttttccctg 6369765  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||| ||| |||||||| |||||||| ||||||| ||||||||||||||||||||    
T  6369764 atttcaaaatacgagtatggga-gggtaacgtgtatatatgtacccaccccgaacccata 6369706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 28045782 - 28045666
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||  |||||||| ||||||||| ||||||||||| || || ||||||||| | || |||| |||  |||||||||||||||| ||||||||||    
T  28045782 aatttgacgtatttttcccattttgactgtgtttaggtatgggtatgggtttttccctaattcaaaacacgaatatgggacgggtaacgggtatataggt 28045683  T
Q  325 acccaccccgaacccata 342  Q
    ||||| ||||||||||||    
T  28045682 accca-cccgaacccata 28045666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 23044954 - 23045070
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||||||||||||||  |||||||| |||| |||||| ||||  ||||| |||||||| |||| ||||||| |||| ||||||||   ||||| |||    
T  23044954 atttgacgggtttttcccaatttgactgagtttgggtatgggtttaggttttccccgatttcaaaatacgggtacgggatgggtaacggagatatatgta 23045053  T
Q  326 cccaccccgaacccata 342  Q
    |||||||||||||||||    
T  23045054 cccaccccgaacccata 23045070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 202 - 361
Target Start/End: Original strand, 6092468 - 6092616
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatg 301  Q
    ||||| || ||||||||||||  ||||| ||||||||| |||||||||| ||||||| |||||| || || |||||||||||| | ||||              
T  6092468 ggttacccgcccgaaccaaattcaatttaacgggttttccccgttttgattgggtttgggtatgggtatgggtttttcccgatctcaaaa---------- 6092557  T
Q  302 ggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
      |||||||||| |||||||||||||||||||||||||||| || |||||||||| ||||    
T  6092558 -cacgggtaacgggtatataggtacccaccccgaacccatacccaaatccgtcccaaatg 6092616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 27900405 - 27900499
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    |||||||||||||||||||| |||| | ||||||||||||||||| | | ||||||||||||| | |||||||||| || |||||| ||| ||||    
T  27900405 gtttgagtttttcccgatttcaaaacatgggtatgggacgggtaatgtggatataggtacccatctcgaacccatacccaaatccgccccgaatg 27900499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 267 - 361
Target Start/End: Original strand, 38006473 - 38006567
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
    ||||| ||||| ||| |||| |||| |||||||||||||| |||||   ||||||||||||||||||||||||||| || |||||||||| ||||    
T  38006473 gtttgggttttccccaatttcaaaatacgggtatgggacgcgtaacagatatataggtacccaccccgaacccatacccaaatccgtcccgaatg 38006567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 225 - 342
Target Start/End: Complemental strand, 2681343 - 2681226
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    ||||||||||||||| |||| |||||||| |||| || ||||||||| ||||| |||||||| |||| || |||| |||| |||||| | | ||||  ||    
T  2681343 aatttgacgggttttccccgatttgactgagtttgggcatgagtttgggttttccccgatttcaaaatacaggtacgggatgggtaatggggatatgagt 2681244  T
Q  325 acccaccccgaacccata 342  Q
    | ||||||||||||||||    
T  2681243 atccaccccgaacccata 2681226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 35194010 - 35194099
Alignment:
Q  284 ttttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||||| ||| ||||  | || ||||||| |||| |||||| ||||    
T  35194010 ttttaaaacacgggtatgggacgggtaacgggtatataggtacccaccccaaactcatactcaaacccgtcccgaatgtagaaaattact 35194099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 263 - 342
Target Start/End: Complemental strand, 6810247 - 6810168
Alignment:
Q  263 atgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||| ||||| |||||||||| || ||||||| || |||||||||||| ||||| |||| |||||||||||||||    
T  6810247 atgagtttgggttttccccgattttagaacacgggtacggaacgggtaacgaggatataagtactcaccccgaacccata 6810168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 226 - 299
Target Start/End: Complemental strand, 43523874 - 43523801
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    ||||||||| ||||||||| |||||||| |||| |||||||||||| ||||| |||||||| |||| |||||||    
T  43523874 atttgacggatttttcccgatttgactgagtttgggtatgagtttgggttttccccgatttcaaaatacgggta 43523801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 225 - 373
Target Start/End: Original strand, 2412688 - 2412836
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||| |||| ||| |||||| || |||| |||||| |||||| |||||||| |||| |||| ||||||||||||    ||||| ||||||| ||    
T  2412688 aatttgacggattttccccattttgattgagtttgggtatgggtttgaatttttcccaatttcaaaacacgggtatgggataaataacgggtatatatgt 2412787  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||||| || ||||| ||| || ||  ||||||  |||||||||| ||||    
T  2412788 acccatcctgaaccaatacccaaactcgtcccgtatgcagaaaattact 2412836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 373
Target Start/End: Complemental strand, 12447451 - 12447360
Alignment:
Q  282 gattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    |||| ||||| || |||||||||| ||||| | |||||||||||||||||||||||| ||| || || ||||||| |||  |||||||||||    
T  12447451 gattgtaaaacacaggtatgggacaggtaatgggtatataggtacccaccccgaacctatacccaaacccgtcccaaatatagaaaactact 12447360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 35311894 - 35311832
Alignment:
Q  280 ccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||| |||| ||||||||||||||||||||   ||||||||||||||| |||||||||||    
T  35311894 ccgatttcaaaacacgggtatgggacgggtaacagatatataggtacccactccgaacccata 35311832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 182 - 304
Target Start/End: Complemental strand, 39422516 - 39422394
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    |||||||| | ||||| | ||| ||||| ||||||||| |   || ||||| |||||| |||| ||||| ||||||| | |||||||||| ||||||| |    
T  39422516 gcaacaaagctcatacctgtgggtaaccgcccgaaccacacccaaattgacaggttttccccgctttgattgggtttggatatgagtttgggtttttctc 39422417  T
Q  282 gattttaaaaaacgggtatggga 304  Q
    ||||| |||| ||||||||||||    
T  39422416 gatttcaaaacacgggtatggga 39422394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 226 - 299
Target Start/End: Original strand, 18116480 - 18116553
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    ||||||||| ||||||||| |||||||| |||| |||||||||||| |||||  ||||||| |||| |||||||    
T  18116480 atttgacggatttttcccgatttgactgagtttgggtatgagtttgggttttctccgatttcaaaatacgggta 18116553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 184 - 265
Target Start/End: Original strand, 42717551 - 42717632
Alignment:
Q  184 aacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatg 265  Q
    |||||||| ||||| | |||||| ||  ||||||||||   |||||||||||||||||||||||||||||| ||| ||||||    
T  42717551 aacaaaactcatacctgtggttacccgtccgaaccaaacccaatttgacgggtttttcccgttttgactggatttgggtatg 42717632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 264 - 368
Target Start/End: Complemental strand, 17153257 - 17153153
Alignment:
Q  264 tgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgca 363  Q
    ||||||||||||||| |||||||||||| | ||||| ||||||| |||| |  ||||| |||| || ||| |||||||| || || ||||||| |||| |    
T  17153257 tgagtttgagttttttccgattttaaaacatgggtacgggacggataactatgatatatgtactcatcccaaacccatacccaaacccgtcccgaatgta 17153158  T
Q  364 gaaaa 368  Q
    |||||    
T  17153157 gaaaa 17153153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 295 - 342
Target Start/End: Complemental strand, 1218812 - 1218765
Alignment:
Q  295 gggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||| ||||||| |||||||||||||||| |||||||||||    
T  1218812 gggtatgggacaggtaacgggtatataggtacccactccgaacccata 1218765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 265
Target Start/End: Original strand, 3564687 - 3564740
Alignment:
Q  211 cccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatg 265  Q
    ||||||||||||  ||||||||||||||| |||||||||||||||||| ||||||    
T  3564687 cccgaaccaaatccaatttgacgggtttt-cccgttttgactgggtttgggtatg 3564740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 10822543 - 10822605
Alignment:
Q  280 ccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||| |||| |||||||| |||||||||||| |  |||| ||||||||||||||||||||    
T  10822543 ccgatttcaaaacacgggtataggacgggtaacggggttatatgtacccaccccgaacccata 10822605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 286
Target Start/End: Original strand, 33420285 - 33420370
Alignment:
Q  201 tggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattt 286  Q
    |||||| ||| ||||||||||  || |||||||||| |||||| |||||| |||||||  |||||||||||  ||||||| |||||    
T  33420285 tggttatccatccgaaccaaacctattttgacgggtatttcccattttgattgggtttgagtatgagtttggatttttcctgattt 33420370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 20634288 - 20634192
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||  |||| ||||||||||| |||||| ||| ||||||||| |||| |||| |||||||||   | ||||| | || |||||||||||||||    
T  20634288 tttgacttagtttgggtatgagtttcagttttccccaattttaaaatacggatatgagacgggtaatagggatatatgcactcaccccgaacccata 20634192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 20650402 - 20650306
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||  |||| ||||||||||| |||||| ||| ||||||||| |||| |||| |||||||||   | ||||| | || |||||||||||||||    
T  20650402 tttgacttagtttgggtatgagtttcagttttccccaattttaaaatacggatatgagacgggtaatagggatatatgcactcaccccgaacccata 20650306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 27302746 - 27302814
Alignment:
Q  274 tttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||| |||||||| |||| |||| |||| ||||| |||| | ||||||||||||||||||||| |||||    
T  27302746 ttttccccgatttcaaaacacggatatgagacggataacaaatatataggtacccaccccgaatccata 27302814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 214 - 361
Target Start/End: Complemental strand, 29665106 - 29664962
Alignment:
Q  214 gaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    |||||||||  |||||||||||||||||| | ||||| || ||||  ||||||||||| ||| |  ||||||| |||| |||||||   || ||||||||    
T  29665106 gaaccaaattcaatttgacgggtttttcc-gctttgattgagtttgtgtatgagtttgggttct--ccgatttcaaaacacgggtacatgatgggtaacg 29665010  T
Q  314 agtatataggtacccaccccgaacccatatcctaatccgtccccaatg 361  Q
     | ||||||||||||||  ||||| |||| || || ||||||| ||||    
T  29665009 gggatataggtacccacttcgaactcatacccaaacccgtcccgaatg 29664962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 182 - 265
Target Start/End: Complemental strand, 1218895 - 1218812
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatg 265  Q
    ||||||||||||||||    ||||| || | ||||||||||  ||||||||| |||||| || |||||||||||||| ||||||    
T  1218895 gcaacaaaacccatacccgcggttacccgctcgaaccaaatccaatttgacgagttttttccattttgactgggtttgggtatg 1218812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 267 - 342
Target Start/End: Complemental strand, 2985232 - 2985157
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||  ||||||| || | | |||| |||||||||||||| |||||||||||| || |||||| |||||    
T  2985232 gtttgagttttctccgatttcaagacatgggtttgggacgggtaacgggtatataggtactcatcccgaaaccata 2985157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 345
Target Start/End: Complemental strand, 34259340 - 34259262
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcc 345  Q
    |||||| |||| | |||||| |||| | |||||  |||||||||||||| ||||| |||||||||| ||||| ||||||    
T  34259340 gtttgaattttcctcgatttcaaaatatgggtaccggacgggtaacgaggatatatgtacccaccctgaacctatatcc 34259262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 313
Target Start/End: Original strand, 40187621 - 40187707
Alignment:
Q  227 tttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacg 313  Q
    ||||||||||||| | || ||||||||||||| |  ||||||||| ||||| ||| |||| |||| ||||||  | |||||||||||    
T  40187621 tttgacgggttttcctcgctttgactgggtttggaaatgagtttgggttttccccaatttcaaaacacgggtgcgagacgggtaacg 40187707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 8453386 - 8453443
Alignment:
Q  276 tttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccacccc 333  Q
    ||||||||||| |||| |||||||||||| |||||||   ||||||||||| ||||||    
T  8453386 tttcccgatttcaaaacacgggtatgggatgggtaacagatatataggtacacacccc 8453443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 342
Target Start/End: Complemental strand, 12915584 - 12915483
Alignment:
Q  241 cccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaaccca 340  Q
    |||| |||||||||| || |||||| ||||| |||||||||||||| | || || || ||||||| ||||| | | ||| | |||||||| ||||| |||    
T  12915584 cccgatttgactggggttgggtatgggtttgggtttttcccgatttcataatacaggcatgggacaggtaatggggatacatgtacccactccgaagcca 12915485  T
Q  341 ta 342  Q
    ||    
T  12915484 ta 12915483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 258
Target Start/End: Complemental strand, 12447538 - 12447463
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggttt 258  Q
    ||||||||||||||||   |||||| ||||||||||||||   |||||||| || ||| ||| ||||||||||||||    
T  12447538 gcaacaaaacccatacccgtggttacccacccgaaccaaacccaatttgac-ggatttccccattttgactgggttt 12447463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 15564724 - 15564668
Alignment:
Q  264 tgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatat 320  Q
    |||||||| |||||||||||||| || ||| | |||||||| |||||||| ||||||    
T  15564724 tgagtttgggtttttcccgatttcaagaaatgcgtatgggatgggtaacgggtatat 15564668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 236 - 300
Target Start/End: Complemental strand, 24207800 - 24207736
Alignment:
Q  236 tttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtat 300  Q
    ||||||||| ||||| || |||| |||||| ||||||||||| |||||||| |||| || |||||    
T  24207800 tttttcccgctttgattgagtttgggtatgggtttgagttttccccgatttcaaaacacaggtat 24207736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 27088292 - 27088413
Alignment:
Q  182 gcaacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttccc 281  Q
    ||||||||| ||||||   || ||| ||||||||||||||   | ||||||||  ||| |||||||| ||| ||||| |||||| ||||  ||||| | |    
T  27088292 gcaacaaaatccatacccgtgattatccacccgaaccaaactcattttgacgg--tttccccgttttaactaggtttgggtatgtgtttaggttttcctc 27088389  T
Q  282 gattttaaaaaacgggtatgggac 305  Q
    |||||||| | |||||||||||||    
T  27088390 gattttaagacacgggtatgggac 27088413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 213 - 340
Target Start/End: Original strand, 32574887 - 32575015
Alignment:
Q  213 cgaaccaaatataatttgacgggtttttcccgttttga-ctgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaa 311  Q
    ||||||||||  | |||||| ||||||||||| ||||| |||||||| || |   ||||| ||||| |||||||| |||| || | || |||| ||||||    
T  32574887 cgaaccaaatccattttgacaggtttttcccgctttgacctgggtttggggacaggtttgggttttccccgatttcaaaacacagatacgggatgggtaa 32574986  T
Q  312 cgagtatataggtacccaccccgaaccca 340  Q
    |  | ||||| ||||||| ||||||||||    
T  32574987 catggatatatgtacccatcccgaaccca 32575015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 225 - 373
Target Start/End: Complemental strand, 33526 - 33372
Alignment:
Q  225 aatttgacgggtttttcccgttttgac------tgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtat 318  Q
    ||||||||||||||| ||||||||||       ||||||| |||||| ||||| ||||| |||||||| |||| ||||||||||||||||||||| ||||    
T  33526 aatttgacgggttttacccgttttgatcgggtttgggtttgggtatgggtttgggttttccccgatttcaaaacacgggtatgggacgggtaacgggtat 33427  T
Q  319 ataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaactact 373  Q
    ||| |||||||||||||||||||| || ||  |||||| ||||||||||||||||    
T  33426 atatgtacccaccccgaacccatacccaaactcgtcccgaatgcagaaaactact 33372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 183 - 311
Target Start/End: Original strand, 14103 - 14230
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    ||||||||| |||||   |||||| |||||| |||||||   |||||||||||||||||||||||||  ||||||| |||||||||||||||||| ||||    
T  14103 caacaaaactcatactcgtggttacccacccaaaccaaacccaatttgacgggtttttcccgttttgtttgggtttgggtatgagtttgagttttccccg 14202  T
Q  283 attttaaaaaacgggtatgggacgggtaa 311  Q
    | ||||||| |||||||||| ||||||||    
T  14203 a-tttaaaacacgggtatggaacgggtaa 14230  T

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Target: scaffold0519 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 183 - 342
Target Start/End: Complemental strand, 10459 - 10307
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||||||||||||  ||||| |   |||||||||||  |||||||||||||||| ||||||||||| ||||| ||||||       | ||||||||    
T  10459 caacaaaacccatacatgcggttacctgtccgaaccaaatccaatttgacgggttttttccgttttgactaggtttgggtatg-------ggttttcccg 10367  T
Q  283 attttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
     |||  ||| ||||||||||||||| ||||  ||||||||||||||||  ||||||||||    
T  10366 ctttccaaacacgggtatgggacggataacaggtatataggtacccactacgaacccata 10307  T

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Target: scaffold0184 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 3075 - 2979
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||||||||||| |||||||||||| ||||| |||||||| |||| |||||||  |||||| ||||  | ||||| ||||||||||||||||||||    
T  3075 tttgactgggtttgggtatgagtttgggttttccccgatttcaaaatacgggtacaggacggataactgggatatatgtacccaccccgaacccata 2979  T

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Target: scaffold0022 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 225 - 368
Target Start/End: Complemental strand, 90718 - 90581
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||||| |||| |||||||||||||||||| |||||| ||||      | |||||||| |||| ||||||||| ||||| ||||| |||||| |||    
T  90718 aatttgacggattttccccgttttgactgggtttgggtatgggttt------tccccgatttcaaaacacgggtatgagacggttaacgggtatattggt 90625  T
Q  325 acccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    |||| |||||||||||||  | ||| |||||  |||||||||||    
T  90624 accctccccgaacccatacacaaattcgtcctgaatgcagaaaa 90581  T

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Target: scaffold0294 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 215 - 368
Target Start/End: Complemental strand, 14912 - 14759
Alignment:
Q  215 aaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacga 314  Q
    |||||||| |||||||||||| |||| | ||||| ||||| ||| |||||||||||| |||||  ||||||| |||| ||  | ||||||||| ||| |     
T  14912 aaccaaatttaatttgacggggtttttcagttttcactggatttgggtatgagtttgggttttctccgatttcaaaacacatgcatgggacggataatgg 14813  T
Q  315 gtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaaaa 368  Q
    |||||||||||||||||  |||| |||| || ||  |||||| |||| ||||||    
T  14812 gtatataggtacccaccttgaacacatacccaaactcgtcccaaatgtagaaaa 14759  T

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Target: scaffold0008 (Bit Score: 46; Significance: 4e-17; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 67875 - 67766
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||| |||||| |||| |||||||||||||  ||||| |||||  |||| ||||||||||||| |||| || ||||||| ||||| | ||||| |||    
T  67875 atttgacaggttttccccgatttgactgggtttgagtatgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgta 67776  T
Q  326 cccaccccga 335  Q
    ||||||||||    
T  67775 cccaccccga 67766  T

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Target: scaffold0008; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 226 - 335
Target Start/End: Complemental strand, 75718 - 75609
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    ||||||| |||||| |||| |||||||||||||  ||||| |||||  |||| ||||||||||||| |||| || ||||||| ||||| | ||||| |||    
T  75718 atttgacaggttttccccgatttgactgggtttgagtatgggtttggattttccccgattttaaaatacggatacgggacggataacggggatatatgta 75619  T
Q  326 cccaccccga 335  Q
    ||||||||||    
T  75618 cccaccccga 75609  T

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Target: scaffold0027 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 7865 - 7738
Alignment:
Q  183 caacaaaacccatacatatggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccg 282  Q
    |||||||| ||||||   |||||| |||||||||| |||| |||||||||||||||| |||||||||| || |||| |||||| ||| || ||||  ||     
T  7865 caacaaaatccatacccgtggttacccacccgaactaaatttaatttgacgggttttccccgttttgattgagtttgggtatgtgttaga-ttttctcca 7767  T
Q  283 attttaaaaaacgggtatgggacgggtaa 311  Q
    |||| |||| ||||||||| |||||||||    
T  7766 atttcaaaacacgggtatgagacgggtaa 7738  T

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Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 14998 - 14900
Alignment:
Q  202 ggttaaccacccgaaccaaatataatttgacgggtttttcccgttttgactgggttta-ggtatgagtttgagtttttcccgattttaaaaaacgggta 299  Q
    ||||| || |||||||||||| ||| ||||||||||||  ||| ||||| |||||||| |||||||||||| ||||| |||||||| |||| |||||||    
T  14998 ggttaccctcccgaaccaaatttaaattgacgggttttctccgctttgattgggtttagggtatgagtttgggttttccccgatttcaaaacacgggta 14900  T

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Target: scaffold0135 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 267 - 368
Target Start/End: Complemental strand, 36239 - 36138
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    ||||| ||||||||| | |||| || |||||||| |||||| ||||||||||||||||| ||| ||| ||| |||| || || ||||||| |||||||||    
T  36239 gtttgggtttttcccaaatttataacacgggtataggacggataacgagtatataggtatccatcccaaactcataaccaaacccgtcccgaatgcagaa 36140  T
Q  367 aa 368  Q
    ||    
T  36139 aa 36138  T

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Target: scaffold0059 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 261 - 342
Target Start/End: Complemental strand, 70186 - 70105
Alignment:
Q  261 gtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||||||  ||||||| ||||| | || ||||||| ||||||||||||||| ||||| ||||||||||| ||||||||    
T  70186 gtatgagtttggatttttcctgatttcataatacgggtacgggacgggtaacgaggatatatgtacccaccccaaacccata 70105  T

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Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 246 - 343
Target Start/End: Original strand, 107373 - 107470
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatat 343  Q
    ||||| |||||||||||||  ||||||||||||| |||||| |||| || ||||||||||||||| |    ||||| ||||||||||||||| |||||    
T  107373 tttgattgggtttaggtataggtttgagtttttctcgatttcaaaacacaggtatgggacgggtagcatagatataagtacccaccccgaactcatat 107470  T

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Target: scaffold0182 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 269 - 345
Target Start/End: Complemental strand, 17050 - 16974
Alignment:
Q  269 ttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcc 345  Q
    ||||| |||||||||||| |||| ||| ||||||||||||| ||| | ||||| ||||||||||||||| |||||||    
T  17050 ttgagcttttcccgatttcaaaatacgtgtatgggacgggtgacggggatatatgtacccaccccgaactcatatcc 16974  T

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Target: scaffold0013 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 342
Target Start/End: Original strand, 128103 - 128199
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    ||||| |||||||  ||||||||||| |||||| || |||| | || ||||||| ||||||||||| | | ||||| ||||||||||||||||||||    
T  128103 tttgattgggtttgagtatgagtttgggttttttccaatttcataatacgggtacgggacgggtaatggggatatatgtacccaccccgaacccata 128199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 226 - 342
Target Start/End: Original strand, 105431 - 105547
Alignment:
Q  226 atttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggta 325  Q
    |||||| ||||||||  || ||||| |||||||  ||||| | |||  ||||| |||||||   || ||||||| ||||||||||||  | ||||| |||    
T  105431 atttgatgggtttttttcgatttgattgggtttgagtatgggattggattttttccgatttcttaatacgggtacgggacgggtaacagggatatatgta 105530  T
Q  326 cccaccccgaacccata 342  Q
    |||||||||||||||||    
T  105531 cccaccccgaacccata 105547  T

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Target: scaffold0005 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 246 - 342
Target Start/End: Complemental strand, 211470 - 211374
Alignment:
Q  246 tttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccata 342  Q
    |||||||| |||| |||||| ||||| |||||  ||||||| |||| ||||||| | ||||||||||  | ||||| ||||||||||||||||||||    
T  211470 tttgactgagtttgggtatgggtttgggttttctccgatttcaaaatacgggtacgagacgggtaacagggatatatgtacccaccccgaacccata 211374  T

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Target: scaffold0244 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 342
Target Start/End: Original strand, 4543 - 4659
Alignment:
Q  225 aatttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggt 324  Q
    |||||||  ||||||  ||||||| |||| ||||  ||||||||||| ||||| ||| |||| |||| ||||||||||||| ||||||  | |||||| |    
T  4543 aatttgattggttttatccgttttaactgagtttgagtatgagtttg-gttttccccaatttcaaaatacgggtatgggacaggtaacagggatatagct 4641  T
Q  325 acccaccccgaacccata 342  Q
    ||||||| ||||||||||    
T  4642 acccaccacgaacccata 4659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 373
Target Start/End: Original strand, 197330 - 197436
Alignment:
Q  267 gtttgagtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccaccccgaacccatatcctaatccgtccccaatgcagaa 366  Q
    ||||||||||||||| |||| |||| |||| |||| |||  |||||  | |||||||||||||  ||||| | ||| || || ||||||| |||||||||    
T  197330 gtttgagtttttccctatttcaaaacacggatatgagacaagtaacaggcatataggtacccaaaccgaatctatacccaaacccgtcccgaatgcagaa 197429  T
Q  367 aactact 373  Q
    || ||||    
T  197430 aattact 197436  T

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Target: scaffold0795 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0795
Description:

Target: scaffold0795; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 309
Target Start/End: Complemental strand, 348 - 267
Alignment:
Q  228 ttgacgggtttttcccgttttgactgggtttaggtatgagtttgagtttttcccgattttaaaaaacgggtatgggacgggt 309  Q
    ||||||||||||  |||||||||||| |||| |||||| || | |||||| | | || | |||| |||||||||||||||||    
T  348 ttgacgggttttctccgttttgactgagtttgggtatgggtatcagttttcctcaatctcaaaacacgggtatgggacgggt 267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 273 - 330
Target Start/End: Complemental strand, 4337 - 4280
Alignment:
Q  273 gtttttcccgattttaaaaaacgggtatgggacgggtaacgagtatataggtacccac 330  Q
    ||||||| |||||| |||| ||||||||| ||| ||||||||||||||  ||||||||    
T  4337 gtttttctcgatttcaaaacacgggtatgagactggtaacgagtatatttgtacccac 4280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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