View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11171_low_30 (Length: 215)
Name: NF11171_low_30
Description: NF11171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11171_low_30 |
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Alignment Details
Target: chr7 (Bit Score: 128; Significance: 2e-66; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 6824062 - 6823927
Alignment:
| Q |
18 |
acccacatcatatcagttccagtatccacttgcaaataataatcctttgacggagttccaattccaattttggcataataaagcctacaatcacaaattc |
117 |
Q |
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| T |
6824062 |
acccacatcatatcagttccagtatccacttgcaaataataatcctttgacggagttccaattccaattttcgcataataaagcctacaatcacaaattg |
6823963 |
T |
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| Q |
118 |
acacaatttcaaaatcaatcaccaaattcttcaacc |
153 |
Q |
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| T |
6823962 |
acacaatttcaaaatcaatcaccaaattcttcaacc |
6823927 |
T |
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