View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11171_low_31 (Length: 208)

Name: NF11171_low_31
Description: NF11171
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11171_low_31
NF11171_low_31
[»] chr7 (35 HSPs)
chr7 (40-178)||(3061586-3061724)
chr7 (42-178)||(5090866-5091002)
chr7 (42-166)||(7890695-7890819)
chr7 (42-166)||(13400704-13400828)
chr7 (40-178)||(29954188-29954338)
chr7 (90-178)||(22004461-22004549)
chr7 (97-178)||(3600150-3600231)
chr7 (90-178)||(22004270-22004358)
chr7 (90-177)||(7891238-7891325)
chr7 (42-166)||(22003463-22003587)
chr7 (101-178)||(22004563-22004640)
chr7 (78-166)||(20959400-20959487)
chr7 (78-166)||(45112702-45112789)
chr7 (101-178)||(7891340-7891417)
chr7 (105-178)||(13927402-13927475)
chr7 (78-166)||(5091023-5091110)
chr7 (78-166)||(7884928-7885015)
chr7 (42-165)||(7889201-7889324)
chr7 (87-178)||(31097954-31098045)
chr7 (98-176)||(13927128-13927206)
chr7 (97-166)||(32656697-32656766)
chr7 (42-155)||(32035186-32035299)
chr7 (97-166)||(32656797-32656866)
chr7 (80-152)||(26161916-26161987)
chr7 (79-156)||(27712689-27712765)
chr7 (87-146)||(3600053-3600112)
chr7 (42-156)||(16718985-16719099)
chr7 (42-156)||(17693195-17693309)
chr7 (40-86)||(31095118-31095164)
chr7 (121-174)||(13927271-13927324)
chr7 (121-155)||(16719122-16719156)
chr7 (121-155)||(17693332-17693366)
chr7 (121-155)||(27712788-27712822)
chr7 (51-119)||(22004135-22004203)
chr7 (51-127)||(7891099-7891175)
[»] chr5 (29 HSPs)
chr5 (87-178)||(20842299-20842390)
chr5 (87-178)||(20844450-20844541)
chr5 (94-178)||(20844704-20844788)
chr5 (90-178)||(23179487-23179575)
chr5 (42-166)||(10037141-10037265)
chr5 (87-178)||(20844941-20845032)
chr5 (40-166)||(23178365-23178491)
chr5 (40-166)||(34757288-34757414)
chr5 (42-166)||(23178625-23178749)
chr5 (42-166)||(32671941-32672065)
chr5 (101-178)||(32672849-32672926)
chr5 (90-174)||(23179296-23179380)
chr5 (87-178)||(20842448-20842539)
chr5 (101-178)||(23179589-23179666)
chr5 (97-178)||(32672754-32672835)
chr5 (78-166)||(12651281-12651368)
chr5 (78-166)||(39874161-39874248)
chr5 (87-177)||(20845090-20845180)
chr5 (97-166)||(23180083-23180152)
chr5 (97-166)||(23184351-23184420)
chr5 (90-154)||(30094369-30094433)
chr5 (97-156)||(3611844-3611903)
chr5 (97-156)||(20109130-20109189)
chr5 (97-156)||(20109898-20109957)
chr5 (121-155)||(3611787-3611821)
chr5 (121-155)||(30094310-30094344)
chr5 (121-155)||(20109073-20109107)
chr5 (121-155)||(20109708-20109742)
chr5 (121-155)||(20109841-20109875)
[»] chr8 (14 HSPs)
chr8 (42-178)||(22732208-22732344)
chr8 (42-166)||(37985456-37985580)
chr8 (42-166)||(18489883-18490007)
chr8 (42-166)||(24014126-24014250)
chr8 (42-166)||(24011222-24011345)
chr8 (42-155)||(18278552-18278665)
chr8 (78-166)||(19958058-19958145)
chr8 (78-166)||(21637051-21637138)
chr8 (42-138)||(37985586-37985682)
chr8 (87-153)||(18489794-18489860)
chr8 (114-166)||(41377822-41377874)
chr8 (79-156)||(410098-410174)
chr8 (40-83)||(18492665-18492708)
chr8 (121-155)||(410041-410075)
[»] chr4 (40 HSPs)
chr4 (42-178)||(53285595-53285731)
chr4 (42-166)||(16905788-16905912)
chr4 (90-178)||(41862213-41862301)
chr4 (44-166)||(42345071-42345193)
chr4 (42-166)||(21380272-21380396)
chr4 (42-166)||(52679693-52679817)
chr4 (90-178)||(22673789-22673877)
chr4 (90-177)||(52680215-52680302)
chr4 (101-178)||(22673893-22673970)
chr4 (101-178)||(41861940-41862017)
chr4 (101-178)||(41862031-41862108)
chr4 (101-178)||(41862122-41862199)
chr4 (101-178)||(41946548-41946625)
chr4 (78-166)||(29363856-29363943)
chr4 (78-166)||(35756412-35756499)
chr4 (78-166)||(42345227-42345314)
chr4 (90-178)||(41946730-41946820)
chr4 (42-166)||(41863165-41863289)
chr4 (101-178)||(41946639-41946716)
chr4 (101-178)||(52680317-52680394)
chr4 (78-166)||(28380247-28380334)
chr4 (78-166)||(29363528-29363615)
chr4 (78-166)||(29363735-29363822)
chr4 (42-166)||(22673246-22673370)
chr4 (90-178)||(41862404-41862492)
chr4 (78-166)||(53285752-53285839)
chr4 (97-166)||(30390829-30390898)
chr4 (121-178)||(41946489-41946546)
chr4 (79-156)||(14148570-14148646)
chr4 (79-156)||(14148424-14148500)
chr4 (79-156)||(19518506-19518582)
chr4 (79-156)||(21585322-21585398)
chr4 (79-156)||(25819673-25819749)
chr4 (47-127)||(22673646-22673726)
chr4 (121-155)||(14148513-14148547)
chr4 (121-155)||(19518449-19518483)
chr4 (121-155)||(21585265-21585299)
chr4 (121-155)||(25819772-25819806)
chr4 (51-127)||(52680076-52680152)
chr4 (78-131)||(29363649-29363701)
[»] chr6 (8 HSPs)
chr6 (90-178)||(3589246-3589334)
chr6 (42-166)||(29374249-29374373)
chr6 (40-166)||(33049731-33049857)
chr6 (42-166)||(29371697-29371821)
chr6 (78-166)||(2271841-2271928)
chr6 (78-166)||(24456418-24456505)
chr6 (42-166)||(33007296-33007419)
chr6 (79-156)||(29921016-29921092)
[»] chr1 (38 HSPs)
chr1 (87-178)||(45507255-45507346)
chr1 (42-166)||(22194827-22194951)
chr1 (42-166)||(22194997-22195121)
chr1 (42-178)||(49791613-49791749)
chr1 (90-178)||(39514208-39514296)
chr1 (87-178)||(45507404-45507495)
chr1 (90-176)||(35598159-35598245)
chr1 (42-166)||(48958517-48958641)
chr1 (42-178)||(49791889-49792025)
chr1 (42-166)||(50704538-50704662)
chr1 (90-177)||(2052067-2052154)
chr1 (42-166)||(2052573-2052697)
chr1 (78-166)||(36455211-36455298)
chr1 (101-178)||(2051975-2052052)
chr1 (42-166)||(2585368-2585491)
chr1 (42-166)||(45507086-45507210)
chr1 (97-166)||(48647758-48647827)
chr1 (78-166)||(7476013-7476100)
chr1 (78-166)||(7476574-7476661)
chr1 (78-166)||(9530040-9530127)
chr1 (78-166)||(42492459-42492546)
chr1 (97-166)||(15689394-15689463)
chr1 (101-178)||(35598066-35598143)
chr1 (78-166)||(13929144-13929231)
chr1 (78-166)||(15689214-15689301)
chr1 (42-156)||(2051777-2051891)
chr1 (42-156)||(36871037-36871151)
chr1 (90-168)||(35597733-35597810)
chr1 (101-159)||(39514136-39514194)
chr1 (101-178)||(35597689-35597765)
chr1 (40-88)||(26209153-26209201)
chr1 (79-156)||(49791079-49791155)
chr1 (79-156)||(49791456-49791532)
chr1 (121-155)||(49791022-49791056)
chr1 (121-155)||(49791399-49791433)
chr1 (51-127)||(2052217-2052293)
chr1 (123-155)||(2051720-2051752)
chr1 (123-155)||(36870980-36871012)
[»] chr3 (52 HSPs)
chr3 (42-166)||(35713093-35713217)
chr3 (42-166)||(47724504-47724628)
chr3 (90-178)||(18199299-18199387)
chr3 (90-178)||(36093965-36094053)
chr3 (87-178)||(6953292-6953383)
chr3 (87-178)||(36947726-36947817)
chr3 (87-178)||(36947865-36947956)
chr3 (87-176)||(6953676-6953765)
chr3 (42-166)||(11823906-11824030)
chr3 (42-166)||(43509713-43509837)
chr3 (42-166)||(49566006-49566130)
chr3 (90-174)||(36094160-36094244)
chr3 (35-172)||(52419528-52419677)
chr3 (97-178)||(6953813-6953894)
chr3 (97-166)||(18199154-18199223)
chr3 (101-178)||(18199401-18199478)
chr3 (42-166)||(36094925-36095049)
chr3 (101-178)||(36948004-36948081)
chr3 (87-178)||(855069-855160)
chr3 (87-178)||(6953431-6953522)
chr3 (97-178)||(26943657-26943738)
chr3 (97-166)||(31483608-31483677)
chr3 (42-166)||(33006068-33006191)
chr3 (101-178)||(36093874-36093951)
chr3 (78-166)||(26943925-26944012)
chr3 (8-166)||(851176-851328)
chr3 (44-166)||(26942979-26943101)
chr3 (87-178)||(36947587-36947678)
chr3 (40-178)||(38662177-38662314)
chr3 (42-166)||(35860543-35860667)
chr3 (42-166)||(36095140-36095264)
chr3 (78-166)||(1883354-1883441)
chr3 (87-166)||(18256787-18256866)
chr3 (101-174)||(26949097-26949170)
chr3 (78-166)||(36091019-36091106)
chr3 (78-151)||(18256681-18256753)
chr3 (120-178)||(6953570-6953628)
chr3 (79-156)||(17657165-17657241)
chr3 (122-178)||(854955-855011)
chr3 (90-154)||(16647453-16647517)
chr3 (97-156)||(13458625-13458684)
chr3 (79-156)||(4585523-4585599)
chr3 (101-166)||(38662154-38662219)
chr3 (97-156)||(12257890-12257949)
chr3 (122-178)||(26949027-26949083)
chr3 (121-155)||(4585622-4585656)
chr3 (121-155)||(12257972-12258006)
chr3 (121-155)||(13458568-13458602)
chr3 (121-155)||(16647542-16647576)
chr3 (42-119)||(35860375-35860452)
chr3 (51-119)||(36094309-36094377)
chr3 (87-119)||(851166-851198)
[»] chr2 (51 HSPs)
chr2 (42-166)||(19640858-19640982)
chr2 (42-166)||(19839451-19839575)
chr2 (42-166)||(26452847-26452971)
chr2 (42-166)||(36440114-36440238)
chr2 (90-178)||(13905753-13905841)
chr2 (87-178)||(35433140-35433231)
chr2 (42-166)||(5001131-5001255)
chr2 (42-166)||(5012801-5012925)
chr2 (90-178)||(13899855-13899943)
chr2 (40-166)||(980487-980613)
chr2 (90-177)||(26453390-26453477)
chr2 (90-177)||(40603226-40603313)
chr2 (97-178)||(32287279-32287360)
chr2 (42-166)||(40602683-40602807)
chr2 (78-166)||(19641057-19641144)
chr2 (78-166)||(19839650-19839737)
chr2 (87-178)||(32287408-32287499)
chr2 (99-178)||(40603325-40603404)
chr2 (97-178)||(1925644-1925725)
chr2 (101-178)||(13905855-13905932)
chr2 (101-178)||(26453492-26453569)
chr2 (42-166)||(42111679-42111803)
chr2 (78-166)||(180195-180282)
chr2 (78-166)||(980034-980121)
chr2 (78-166)||(2444108-2444195)
chr2 (42-166)||(21591195-21591319)
chr2 (78-166)||(1501779-1501866)
chr2 (78-166)||(13899085-13899172)
chr2 (87-159)||(35433010-35433082)
chr2 (87-174)||(27999659-27999746)
chr2 (87-174)||(28090393-28090480)
chr2 (87-174)||(28096716-28096803)
chr2 (97-166)||(204367-204436)
chr2 (87-159)||(1925514-1925586)
chr2 (78-166)||(14039702-14039789)
chr2 (97-178)||(32287015-32287096)
chr2 (120-178)||(32287142-32287200)
chr2 (79-156)||(2296966-2297042)
chr2 (79-156)||(25643727-25643803)
chr2 (121-166)||(980282-980327)
chr2 (79-156)||(6120827-6120903)
chr2 (121-155)||(2297065-2297099)
chr2 (121-155)||(6120926-6120960)
chr2 (121-155)||(25643826-25643860)
chr2 (51-127)||(26453251-26453327)
chr2 (44-88)||(1271945-1271989)
chr2 (97-156)||(13900059-13900121)
chr2 (40-88)||(30915407-30915455)
chr2 (121-155)||(13900144-13900178)
chr2 (51-119)||(13899720-13899788)
chr2 (51-127)||(40603087-40603163)
[»] scaffold0121 (5 HSPs)
scaffold0121 (90-178)||(41187-41275)
scaffold0121 (42-166)||(40777-40901)
scaffold0121 (101-178)||(41289-41366)
scaffold0121 (101-178)||(41380-41457)
scaffold0121 (51-119)||(41047-41115)
[»] scaffold0160 (3 HSPs)
scaffold0160 (87-178)||(36076-36167)
scaffold0160 (87-178)||(36225-36315)
scaffold0160 (87-159)||(36373-36445)
[»] scaffold0097 (3 HSPs)
scaffold0097 (78-166)||(44644-44731)
scaffold0097 (42-131)||(48739-48828)
scaffold0097 (51-119)||(51517-51585)
[»] scaffold1113 (1 HSPs)
scaffold1113 (97-166)||(2488-2557)
[»] scaffold0642 (2 HSPs)
scaffold0642 (79-156)||(293-369)
scaffold0642 (121-155)||(392-426)
[»] scaffold0374 (2 HSPs)
scaffold0374 (79-156)||(107-183)
scaffold0374 (121-155)||(50-84)
[»] scaffold0345 (2 HSPs)
scaffold0345 (79-156)||(10204-10280)
scaffold0345 (121-155)||(10303-10337)
[»] scaffold0105 (2 HSPs)
scaffold0105 (79-156)||(28700-28776)
scaffold0105 (121-155)||(28643-28677)
[»] scaffold0119 (2 HSPs)
scaffold0119 (44-88)||(29248-29292)
scaffold0119 (44-88)||(35501-35545)


Alignment Details
Target: chr7 (Bit Score: 119; Significance: 5e-61; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 3061724 - 3061586
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctc 139  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  3061724 tctcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccactttttcctccttcaaaacctaaccatatttcctaattcccctc 3061625  T
Q  140 ctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||||||||| ||||||||| ||||||||    
T  3061624 ctccaaaccctaaccatgatctcctaatttccctcctcc 3061586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 5090866 - 5091002
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  5090866 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tatcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 5090964  T
Q  141 tccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||||||||||||||||||  |||||||    
T  5090965 tccaaaccctaaccatgatttcctaatttcactcctcc 5091002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 7890695 - 7890819
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  7890695 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 7890793  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  7890794 tccaaaccctaaccatgatttcctaa 7890819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 13400828 - 13400704
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  13400828 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 13400730  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  13400729 tccaaaccctaaccatgatttcctaa 13400704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 40 - 178
Target Start/End: Original strand, 29954188 - 29954338
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt------------gtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    |||||||||||||||||||||| ||||| ||||||||||||||||||||            ||||||| ||||||||||||||||||||||| |||||||    
T  29954188 tctcttattcttaaacaaagcattgtcgtcctaattatacctaatattttaacctaaaattgtagccacttttccctccttcaaaacctaaccatatttc 29954287  T
Q  128 ctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
     ||| ||||||||||||||||||||||||||| ||||||||| ||||||||    
T  29954288 ataactcccctcctccaaaccctaaccatgatctcctaatttccctcctcc 29954338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 22004461 - 22004549
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22004461 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 22004549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 3600231 - 3600150
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3600231 ttttccctccttcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 3600150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 22004270 - 22004358
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  22004270 tagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctccaaaccctaaccatgatttcctaatttccctcctcc 22004358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 7891238 - 7891325
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctc 177  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7891238 tagctatttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctc 7891325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 22003463 - 22003587
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  22003463 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcc 22003561  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  22003562 tccaaaccctaaccatgatttcctaa 22003587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 22004563 - 22004640
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22004563 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 22004640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 20959487 - 20959400
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  20959487 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 20959400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 45112702 - 45112789
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45112702 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 45112789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 7891340 - 7891417
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7891340 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 7891417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 105 - 178
Target Start/End: Original strand, 13927402 - 13927475
Alignment:
Q  105 ccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13927402 ccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 13927475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 5091023 - 5091110
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5091023 acctaatattt-tagcaactttttcctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 5091110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 7884928 - 7885015
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  7884928 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 7885015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 42 - 165
Target Start/End: Complemental strand, 7889324 - 7889201
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||  ||||||||||  ||| ||||||||| || ||||||||||  ||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  7889324 tcttatttctaaacaaagctttgttgccctaattttaacctaatatttc-agcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 7889226  T
Q  141 tccaaaccctaaccatgatttccta 165  Q
    |||||||||||||||||||||||||    
T  7889225 tccaaaccctaaccatgatttccta 7889201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 31097954 - 31098045
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||| ||||||||| ||||||||    
T  31097954 ttgtagccattttttcctccttcaaaacctaaccatatttcttaactcccctcctccaaaccctaactatgatctcctaatttccctcctcc 31098045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 13927128 - 13927206
Alignment:
Q  98 tttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcct 176  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||||    
T  13927128 tttccctccttcaaaacctaactatatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctcct 13927206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 32656697 - 32656766
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  32656697 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaa 32656766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 42 - 155
Target Start/End: Original strand, 32035186 - 32035299
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||  |||||||||||||    
T  32035186 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattctctaattcccctcc 32035284  T
Q  141 tccaaaccctaacca 155  Q
    |||||||||| ||||    
T  32035285 tccaaaccctcacca 32035299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 32656797 - 32656866
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  32656797 ttttccctcattcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaa 32656866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 26161916 - 26161987
Alignment:
Q  80 ctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaa 152  Q
    ||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  26161916 ctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaa 26161987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 27712689 - 27712765
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  27712689 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 27712765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 146
Target Start/End: Complemental strand, 3600112 - 3600053
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaa 146  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||||||||||||||||||    
T  3600112 ttgtagccacttttccttccttcaaaacctaaccatatttcctaattcccctcctccaaa 3600053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 16718985 - 16719099
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| |||||    
T  16718985 tcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcc 16719083  T
Q  141 tccaaaccctaaccat 156  Q
    |||||||| |||||||    
T  16719084 tccaaaccttaaccat 16719099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 17693195 - 17693309
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| |||||    
T  17693195 tcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcc 17693293  T
Q  141 tccaaaccctaaccat 156  Q
    |||||||| |||||||    
T  17693294 tccaaaccttaaccat 17693309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 40 - 86
Target Start/End: Original strand, 31095118 - 31095164
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatat 86  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  31095118 tctcttattcttaaacaaagcactgtcgccctaattatacctaatat 31095164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 174
Target Start/End: Original strand, 13927271 - 13927324
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctc 174  Q
    ||||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  13927271 atatttcctaatttccctcctccaaaccttaaccatgatttcctaatttccctc 13927324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 16719122 - 16719156
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  16719122 atatttcctaattcccctcctccaaaccctaacca 16719156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 17693332 - 17693366
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  17693332 atatttcctaattcccctcctccaaaccctaacca 17693366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 27712788 - 27712822
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  27712788 atatttcctaattcccctcctccaaaccctaacca 27712822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 22004135 - 22004203
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| |||||||||||||||||||||||||    
T  22004135 taaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaac 22004203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 7891099 - 7891175
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  7891099 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 7891175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 84; Significance: 4e-40; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 20842299 - 20842390
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  20842299 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttcccttctcc 20842390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 20844450 - 20844541
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  20844450 ttgtagccatttttccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 20844541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 94 - 178
Target Start/End: Original strand, 20844704 - 20844788
Alignment:
Q  94 catttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20844704 catttttccctcattcaaaacctaacgatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 20844788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 23179487 - 23179575
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23179487 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 23179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 10037141 - 10037265
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  10037141 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 10037239  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    |||||||||||||||| |||||||||    
T  10037240 tccaaaccctaaccatcatttcctaa 10037265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 20844941 - 20845032
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||    
T  20844941 ttgtagccactttttcctccttcaaaacctaacaatatttcctaattcccttcctccaaaccctaactatgatttcctaatttacctcctcc 20845032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 23178365 - 23178491
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  23178365 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 23178463  T
Q  139 cctccaaaccctaaccatgatttcctaa 166  Q
    |||| |||||||||||||||||||||||    
T  23178464 cctcgaaaccctaaccatgatttcctaa 23178491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 166
Target Start/End: Original strand, 34757288 - 34757414
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  34757288 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 34757386  T
Q  139 cctccaaaccctaaccatgatttcctaa 166  Q
    |||| |||||||||||||||||||||||    
T  34757387 cctcgaaaccctaaccatgatttcctaa 34757414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 23178625 - 23178749
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  23178625 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 23178723  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  23178724 tccaaaccctaaccatgatttcctaa 23178749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 32671941 - 32672065
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| |||||||||||| |||||||||||| ||||||||||||| ||||||    
T  32671941 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccatcaaaacctaaccatatttcctaatttccctcc 32672039  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||| ||||||||||||    
T  32672040 tccaaaccctaactatgatttcctaa 32672065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 32672849 - 32672926
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32672849 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 32672926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 90 - 174
Target Start/End: Original strand, 23179296 - 23179380
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctc 174  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  23179296 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctcccaaccctaaccatgatttcctaatttccctc 23179380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 20842448 - 20842539
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| |||||||| |||| ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  20842448 ttgtagccatttttccctcattcaaaacataaccatatttcataattcccctcctccaaaccctaaccatgattttctaatttccctcctcc 20842539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 23179589 - 23179666
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  23179589 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 23179666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 32672754 - 32672835
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||| ||||||||    
T  32672754 ttttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaatttccctcctcc 32672835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 12651281 - 12651368
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  12651281 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 12651368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 39874161 - 39874248
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  39874161 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 39874248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 20845090 - 20845180
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctc 177  Q
    |||| |||| ||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||| |||||| |||||||    
T  20845090 ttgtggccacttttccctccttcaaaacctaactatatttcctaattctcctccttcaaaccctaaccatgatttcgtaatttccctcctc 20845180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 23180083 - 23180152
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  23180083 ttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 23180152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 23184351 - 23184420
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  23184351 ttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 23184420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 30094433 - 30094369
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaacc 154  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  30094433 tagcaatttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 30094369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 3611903 - 3611844
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  3611903 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 3611844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 20109189 - 20109130
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  20109189 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 20109957 - 20109898
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  20109957 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 20109898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 3611821 - 3611787
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  3611821 atatttcctaattcccctcctccaaaccctaacca 3611787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 30094344 - 30094310
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  30094344 atatttcctaattcccctcctccaaaccctaacca 30094310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109107 - 20109073
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109107 atattttctaattcccctcctccaaaccctaacca 20109073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109742 - 20109708
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109742 atattttctaattcccctcctccaaaccctaacca 20109708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 20109875 - 20109841
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  20109875 atattttctaattcccctcctccaaaccctaacca 20109841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 6e-39; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 22732344 - 22732208
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||| ||||||||||||||    
T  22732344 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatattccctaattcccctcc 22732246  T
Q  141 tccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||||||||||||||||||  |||||||    
T  22732245 tccaaaccctaaccatgatttcctaatttcactcctcc 22732208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 37985580 - 37985456
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || || ||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  37985580 tcttattcctaaacaaagctttgttgccctaattttaacttaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcc 37985482  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  37985481 tccaaaccctaaccatgatttcctaa 37985456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 18489883 - 18490007
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  18489883 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 18489981  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  18489982 tccaaaccctaaccatgatttcctaa 18490007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 24014250 - 24014126
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  24014250 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 24014152  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    |||||||||||||||| |||||||||    
T  24014151 tccaaaccctaaccatcatttcctaa 24014126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 24011345 - 24011222
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcct 141  Q
    |||||||| ||||||||||  ||| |||||||||  ||||||||||| |||| ||||||||||||||||||| ||||| ||||||| |||||| ||||||    
T  24011345 tcttattcctaaacaaagctttgttgccctaatttaacctaatattt-tagcaatttttccctccttcaaaatctaaccatatttcataattctcctcct 24011247  T
Q  142 ccaaaccctaaccatgatttcctaa 166  Q
    |||||||||||||||||||||||||    
T  24011246 ccaaaccctaaccatgatttcctaa 24011222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 42 - 155
Target Start/End: Complemental strand, 18278665 - 18278552
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  18278665 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 18278567  T
Q  141 tccaaaccctaacca 155  Q
    |||||||||||||||    
T  18278566 tccaaaccctaacca 18278552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 19958058 - 19958145
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  19958058 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgatttcctaa 19958145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 21637051 - 21637138
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||||    
T  21637051 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcctctcctccaaaccctaaccatgatttcctaa 21637138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 42 - 138
Target Start/End: Complemental strand, 37985682 - 37985586
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||    
T  37985682 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccct 37985586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 87 - 153
Target Start/End: Complemental strand, 18489860 - 18489794
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaac 153  Q
    |||||| || |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  18489860 ttgtagtcacttttccctccttcaaaacataaccatatttcctaattcccctcctccaaaccctaac 18489794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 41377874 - 41377822
Alignment:
Q  114 cctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  41377874 cctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 41377822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 410174 - 410098
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||    
T  410174 cctaatattt-tagcaacttttccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 410098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 83
Target Start/End: Complemental strand, 18492708 - 18492665
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaa 83  Q
    |||||||||||||||||||||| | |||||||||||||||||||    
T  18492708 tctcttattcttaaacaaagcattatcgccctaattatacctaa 18492665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 410075 - 410041
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  410075 atatttcctaattcccctcctccaaaccctaacca 410041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 6e-39; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 42 - 178
Target Start/End: Original strand, 53285595 - 53285731
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | ||||||||||||||||||||||||| ||||||||||||||||||||    
T  53285595 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tatcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 53285693  T
Q  141 tccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||||||||||||||||||  |||||||    
T  53285694 tccaaaccctaaccatgatttcctaatttcactcctcc 53285731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 16905788 - 16905912
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  16905788 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 16905886  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  16905887 tccaaaccctaaccatgatttcctaa 16905912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 41862301 - 41862213
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41862301 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41862213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 44 - 166
Target Start/End: Original strand, 42345071 - 42345193
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctc 142  Q
    |||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42345071 ttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctc 42345169  T
Q  143 caaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||    
T  42345170 caaaccctaaccatgatttcctaa 42345193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 21380272 - 21380396
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||  | ||||||||||||||||||||||| ||||||||||||||||||||    
T  21380272 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagaaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 21380370  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  21380371 tccaaaccctaaccatgatttcctaa 21380396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 52679693 - 52679817
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||| ||||||||||||||||| ||||||||||||| ||||||    
T  52679693 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttctctccttcaaaacctaaccatatttcctaatttccctcc 52679791  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  52679792 tccaaaccctaaccatgatttcctaa 52679817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 22673789 - 22673877
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  22673789 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccataatttcctaatttccctcctcc 22673877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 52680215 - 52680302
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctc 177  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  52680215 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctc 52680302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 22673893 - 22673970
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22673893 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 22673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 41862017 - 41861940
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41862017 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41861940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 41862108 - 41862031
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41862108 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41862031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 41862199 - 41862122
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41862199 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41862122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 41946625 - 41946548
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41946625 ccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcc 41946548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 29363943 - 29363856
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29363943 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 29363856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 35756412 - 35756499
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  35756412 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 35756499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 42345227 - 42345314
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  42345227 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 42345314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 41946820 - 41946730
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatat--ttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41946820 tagccacttttccctccttcaaaacctaaccatatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41946730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 41863289 - 41863165
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || || ||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  41863289 tcttattcctaaacaaagctttgttgccctaattttaacttaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 41863191  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  41863190 tccaaaccctaaccatgatttcctaa 41863165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 41946716 - 41946639
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41946716 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41946639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 52680317 - 52680394
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  52680317 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 52680394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 28380247 - 28380334
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  28380247 acctaatattt-tagcaacttttccccccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 28380334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 29363615 - 29363528
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29363615 acctaatattt-tagcaacttttccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 29363528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 29363822 - 29363735
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  29363822 acctaatattt-tagcaacttttccatccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 29363735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 22673246 - 22673370
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||  ||| ||||||||||||| ||||||||||||| ||||||    
T  22673246 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttatctctttcaaaacctaaccatatttcctaatttccctcc 22673344  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    |||||||| |||||||||||||||||    
T  22673345 tccaaaccttaaccatgatttcctaa 22673370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 41862492 - 41862404
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||| ||||| ||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  41862492 tagccactttaccctctttcaaaacctaaccatattttctatttcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41862404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 53285752 - 53285839
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  53285752 acctaatattt-tagcaactttttcctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 53285839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 30390898 - 30390829
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||| ||||||||||||    
T  30390898 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaactatgatttcctaa 30390829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 41946546 - 41946489
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41946546 atatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcc 41946489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 14148646 - 14148570
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  14148646 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 14148500 - 14148424
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||| |||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  14148500 cctaatattt-tagcaacttttctctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 14148424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 19518582 - 19518506
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  19518582 cctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 19518506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 21585398 - 21585322
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | ||||||||| || |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  21585398 cctaatattt-tagcaacttttccctcatttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 21585322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 25819673 - 25819749
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  25819673 cctaatattt-tagcaacttttccctcctttaaaacataaccatatttcctaattctcctcctccaaaccttaaccat 25819749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 47 - 127
Target Start/End: Original strand, 22673646 - 22673726
Alignment:
Q  47 ttcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  22673646 ttcttaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttc 22673726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 14148547 - 14148513
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  14148547 atatttcctaattcccctcctccaaaccctaacca 14148513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 19518483 - 19518449
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  19518483 atatttcctaattcccctcctccaaaccctaacca 19518449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 21585299 - 21585265
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  21585299 atatttcctaattcccctcctccaaaccctaacca 21585265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 25819772 - 25819806
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  25819772 atatttcctaattcccctcctccaaaccctaacca 25819806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 52680076 - 52680152
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| ||||||||||||||||||||||||| |||||||    
T  52680076 taaacaaagctttgttgccctaattttaaccttatattt-tagcaatttttccctccttcaaaacctaaccatatttc 52680152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 29363701 - 29363649
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaa 131  Q
    ||||||||||| |||| | ||||||||||||||||| ||||| |||||||||||    
T  29363701 acctaatattt-tagcaacttttccctccttcaaaatctaaccatatttcctaa 29363649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 3e-38; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 3589246 - 3589334
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3589246 tagccatttttccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 3589334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 29374373 - 29374249
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||||||||    
T  29374373 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatatttcctaattcccctcc 29374275  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||  ||||||||    
T  29374274 tccaaaccctaaccatcgtttcctaa 29374249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 33049857 - 33049731
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  33049857 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 33049759  T
Q  139 cctccaaaccctaaccatgatttcctaa 166  Q
    |||| |||||||||||||||||||||||    
T  33049758 cctcgaaaccctaaccatgatttcctaa 33049731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 29371821 - 29371697
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | | ||||||||||||||||| ||||| ||||||||||||||||||||    
T  29371821 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-taacaacttttccctccttcaaaatctaaccatatttcctaattcccctcc 29371723  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  29371722 tccaaaccctaaccatgatttcctaa 29371697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 2271841 - 2271928
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2271841 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 2271928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 24456418 - 24456505
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  24456418 acctaatattt-tagcaaattttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaa 24456505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 33007419 - 33007296
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattatacct-aatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| |||||||||   ||| ||||||||| || || ||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  33007419 tcttattcctaaacaaagttttgttgccctaattttaacttaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 33007321  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    | ||||||||| ||||||||||||||    
T  33007320 t-caaaccctagccatgatttcctaa 33007296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 29921016 - 29921092
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||| |||||||  ||||||||| |||||||||||||| |||||||||||||||||||||    
T  29921016 cctaatattt-tagcaactttttcctcctttgaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 29921092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 1e-37; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 45507346 - 45507255
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45507346 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 45507255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 22194827 - 22194951
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  22194827 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 22194925  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  22194926 tccaaaccctaaccatgatttcctaa 22194951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 22194997 - 22195121
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  22194997 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 22195095  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  22195096 tccaaaccctaaccatgatttcctaa 22195121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 49791749 - 49791613
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||| |||     
T  49791749 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacgatatttcctaattcctctct 49791651  T
Q  141 tccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  49791650 tccaaaccctaaccatgatttcctaatttccctcctcc 49791613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 39514296 - 39514208
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  39514296 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 39514208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 45507495 - 45507404
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  45507495 ttgtagccatttttcctttcttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 45507404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 90 - 176
Target Start/End: Complemental strand, 35598245 - 35598159
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcct 176  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  35598245 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcct 35598159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 48958517 - 48958641
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  48958517 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 48958615  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  48958616 tccaaaccctaaccatgatttcctaa 48958641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 178
Target Start/End: Complemental strand, 49792025 - 49791889
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||| |||     
T  49792025 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacgatatttcctaattcctctct 49791927  T
Q  141 tccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||| ||||||| ||||||||    
T  49791926 tccaaaccctaaccatgattttctaatttccctcctcc 49791889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 50704538 - 50704662
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  50704538 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 50704636  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||| ||||||||||||||||||    
T  50704637 tccaaactctaaccatgatttcctaa 50704662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 90 - 177
Target Start/End: Complemental strand, 2052154 - 2052067
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctc 177  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2052154 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctc 2052067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 2052697 - 2052573
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||| |||||| ||||||    
T  2052697 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattttctaatttccctcc 2052599  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    |||||||||||||||| |||||||||    
T  2052598 tccaaaccctaaccataatttcctaa 2052573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 36455211 - 36455298
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  36455211 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 36455298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 2052052 - 2051975
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  2052052 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 2051975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 2585368 - 2585491
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    ||||||||| |||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||    
T  2585368 tcttattct-aaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcc 2585465  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    || |||||||||||||||||||||||    
T  2585466 tctaaaccctaaccatgatttcctaa 2585491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 45507210 - 45507086
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||| | ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||| |||||||||| |||    
T  45507210 tcttatacctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccttcc 45507112  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  45507111 tccaaaccctaaccatgatttcctaa 45507086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 48647758 - 48647827
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  48647758 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 48647827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 7476013 - 7476100
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  7476013 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 7476100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 7476574 - 7476661
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  7476574 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 7476661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 9530040 - 9530127
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  9530040 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 9530127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 42492459 - 42492546
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  42492459 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 42492546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 15689394 - 15689463
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  15689394 ttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 15689463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 35598143 - 35598066
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||  || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  35598143 ccctccttcaaaacctaagcatgtttcctaatttccctcctccaaaccctaaccatgatttcctaattttcctcctcc 35598066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 13929231 - 13929144
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||    
T  13929231 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattaccaaattcccctcctccaaaccctaaccatgatttcctaa 13929144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 15689214 - 15689301
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||||||||    
T  15689214 acctaatattt-tagcaaattttccctccttcaaaacctaaccatatttcctaattctcctcctccaaaccctaactatgatttcctaa 15689301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 2051891 - 2051777
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||    
T  2051891 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcc 2051793  T
Q  141 tccaaaccctaaccat 156  Q
    ||||||||||||||||    
T  2051792 tccaaaccctaaccat 2051777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 42 - 156
Target Start/End: Complemental strand, 36871151 - 36871037
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||    
T  36871151 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcc 36871053  T
Q  141 tccaaaccctaaccat 156  Q
    ||||||||||||||||    
T  36871052 tccaaaccctaaccat 36871037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 90 - 168
Target Start/End: Complemental strand, 35597810 - 35597733
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaatt 168  Q
    |||||| ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||    
T  35597810 tagccacttttccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccat-atttcctaatt 35597733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 39514194 - 39514136
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  39514194 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgat 39514136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 35597765 - 35597689
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||| |||| |||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||    
T  35597765 ccctcctccaaaccctaaccatatttcctaattccc-tcctccaaatcctaaccatgatttcctaattttcctcctcc 35597689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 26209153 - 26209201
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  26209153 tctcttattcttaaacaaagcattgtcgccctaattatacctaatattt 26209201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 49791155 - 49791079
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  49791155 cctaatattt-tagcaacttttccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 49791532 - 49791456
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| ||||| |||| |||||||||||||| ||||||||||||| |||||||    
T  49791532 cctaatattt-tagcaacttttccctcctttaaaacttaaccatatttcctaattctcctcctccaaaccttaaccat 49791456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 49791056 - 49791022
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  49791056 atatttcctaattcccctcctccaaaccctaacca 49791022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 49791433 - 49791399
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  49791433 atatttcctaattcccctcctccaaaccctaacca 49791399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Complemental strand, 2052293 - 2052217
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  2052293 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 2052217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 2051752 - 2051720
Alignment:
Q  123 atttcctaattcccctcctccaaaccctaacca 155  Q
    ||||| |||||||||||||||||||||||||||    
T  2051752 atttcataattcccctcctccaaaccctaacca 2051720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 155
Target Start/End: Complemental strand, 36871012 - 36870980
Alignment:
Q  123 atttcctaattcccctcctccaaaccctaacca 155  Q
    ||||| |||||||||||||||||||||||||||    
T  36871012 atttcataattcccctcctccaaaccctaacca 36870980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 35713093 - 35713217
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  35713093 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 35713191  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  35713192 tccaaaccctaaccatgatttcctaa 35713217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 47724504 - 47724628
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  47724504 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 47724602  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  47724603 tccaaaccctaaccatgatttcctaa 47724628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 18199299 - 18199387
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18199299 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 18199387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Complemental strand, 36094053 - 36093965
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36094053 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 36093965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 6953383 - 6953292
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6953383 ttgtaaccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 6953292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 36947817 - 36947726
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  36947817 ttgtagccacttttccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcc 36947726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 36947956 - 36947865
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  36947956 ttgtagccacttttccctccttcaaaacctaaccatatttcctaatacccctcctccaaaccctaaccatgatttcctaatttccctcctcc 36947865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 87 - 176
Target Start/End: Complemental strand, 6953765 - 6953676
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcct 176  Q
    ||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  6953765 ttgtaaccacttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcct 6953676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 11823906 - 11824030
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||| |    
T  11823906 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattccccttc 11824004  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  11824005 tccaaaccctaaccatgatttcctaa 11824030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 43509837 - 43509713
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  43509837 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaatttttccctccttcaaaacctaaccatatttcctaatttccctcc 43509739  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||| ||||||||||||||||    
T  43509738 tccaaaccccaaccatgatttcctaa 43509713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 49566130 - 49566006
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  49566130 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 49566032  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  49566031 tccaaaccctaaccatgatttcctaa 49566006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 174
Target Start/End: Complemental strand, 36094244 - 36094160
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctc 174  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  36094244 tagccacttttccctccttcaaaacctaacaatatttcctaattcccctcctcccaaccctaaccatgatttcctaatttccctc 36094160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 172
Target Start/End: Complemental strand, 52419677 - 52419528
Alignment:
Q  35 tctcttctcttattcttaaacaaagcactgtcgccctaattatacctaatattt------------gtagccatttttccctccttcaaaacctaacaat 122  Q
    |||| |||||||||| ||||||||||||||| ||| ||||||||||||||||||            ||||||| ||||||||||||||||||||||| ||    
T  52419677 tctcatctcttattcataaacaaagcactgttgccttaattatacctaatatttaacctaaaaatcgtagccacttttccctccttcaaaacctaaccat 52419578  T
Q  123 atttcctaattcccctcctccaaaccctaaccatgatttcctaattttcc 172  Q
    |||| ||||||||||| ||||||| |||||||||||||||||||||||||    
T  52419577 attttctaattccccttctccaaatcctaaccatgatttcctaattttcc 52419528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 6953894 - 6953813
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6953894 ttttccctccttcaaaatctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 6953813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 18199223 - 18199154
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18199223 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 18199154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 18199401 - 18199478
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  18199401 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcttaattttcctcctcc 18199478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 36095049 - 36094925
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  36095049 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaactatatttcctaatttccctcc 36094951  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  36094950 tccaaaccctaaccatgatttcctaa 36094925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 36948081 - 36948004
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36948081 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 36948004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 855069 - 855160
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||    
T  855069 ttgtagacacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaactatgatttcctaatttccctcctcc 855160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 6953522 - 6953431
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||| ||| |||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6953522 ttgtaaccacttttccctcccttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 6953431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 26943657 - 26943738
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  26943657 ttttccctccttcaaaacctaaccatatttactaattcccctcctccaaaccctaaccatgatttcttaatttccctcctcc 26943738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 31483608 - 31483677
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31483608 ttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 31483677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 33006191 - 33006068
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  33006191 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaacc-tatttcctaattcccctcc 33006094  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    |||||||||||||||| |||||||||    
T  33006093 tccaaaccctaaccatcatttcctaa 33006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Complemental strand, 36093951 - 36093874
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  36093951 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 36093874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 26943925 - 26944012
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  26943925 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 26944012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 851176 - 851328
Alignment:
Q  8 ttttccctctttcaaaacctaaccatatctcttctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctcc 106  Q
    ||||||||| |||||||||||||  |||||    |||||||||||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||    
T  851176 ttttccctccttcaaaacctaac--tatct----tcttattcttaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcc 851268  T
Q  107 ttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||| |||||  |||||||||||||||||||| |||||||| |||| ||||    
T  851269 ttcaaaacctaaccatattctctaattcccctcctccaaactctaaccataatttgctaa 851328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 166
Target Start/End: Original strand, 26942979 - 26943101
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctc 142  Q
    |||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||    
T  26942979 ttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctc 26943077  T
Q  143 caaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||| ||||    
T  26943078 caaaccctaaccatgattttctaa 26943101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 36947678 - 36947587
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||  |||||| ||||||||    
T  36947678 ttgtagccacttttccctccttcaaaacctaaccatatttccaaattcccctcctccaaaccctaactatgattttttaatttccctcctcc 36947587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 40 - 178
Target Start/End: Complemental strand, 38662314 - 38662177
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| |||||||||   ||| ||||||||| || |||||||||| |||| | ||||| ||||||||||||||||| ||||||||||||||||||    
T  38662314 tctcttattcctaaacaaagttttgttgccctaattttaacctaatattt-tagcaacttttctctccttcaaaacctaaccatatttcctaattcccct 38662216  T
Q  139 cctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||| ||||||||| |||||||||||  ||||||||    
T  38662215 cctccaaaacctaaccat-atttcctaattcccctcctcc 38662177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 35860667 - 35860543
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||| || |||    
T  35860667 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaatttccttcc 35860569  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||| ||||||||||||||||||    
T  35860568 tccaaacgctaaccatgatttcctaa 35860543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 36095264 - 36095140
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||| |||||||||| ||||||||||||| || |||    
T  36095264 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaatttccttcc 36095166  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||| ||||||||||||||||||    
T  36095165 tccaaacgctaaccatgatttcctaa 36095140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 1883441 - 1883354
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||    
T  1883441 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctaattcccctcctccaaaccctaactatgatttcctaa 1883354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 18256866 - 18256787
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  18256866 ttgtagtcacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaactatgattttctaa 18256787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 26949097 - 26949170
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctc 174  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||    
T  26949097 ccctccttcaaaacctaaccatatttcctaactcccctcctccaaactctaaccatgatttcctaatttccctc 26949170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 36091106 - 36091019
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||| |||| |||| ||||||||||||||||||||||||||||||    
T  36091106 acctaatattt-tagcaacttttccctccttcaaaacctaaccatattccctagttcctctcctccaaaccctaaccatgatttcctaa 36091019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 78 - 151
Target Start/End: Complemental strand, 18256753 - 18256681
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaacccta 151  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  18256753 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaacccta 18256681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 6953628 - 6953570
Alignment:
Q  120 aatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6953628 aatatttcctaattcccctcctccaaaccctaaccatgattttctaatttccctcctcc 6953570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 17657165 - 17657241
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  17657165 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 17657241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 854955 - 855011
Alignment:
Q  122 tatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  854955 tattttctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 855011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 16647453 - 16647517
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaacc 154  Q
    |||| |||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||    
T  16647453 tagcaatttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaacc 16647517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 13458684 - 13458625
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  13458684 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccctaaccat 13458625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 4585523 - 4585599
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  4585523 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 4585599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 101 - 166
Target Start/End: Complemental strand, 38662219 - 38662154
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||| ||||||||||| |||||||||||||||||||||||||||| |||| ||||||| ||||    
T  38662219 ccctcctccaaaacctaaccatatttcctaattcccctcctccaaaccataacaatgattttctaa 38662154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 12257890 - 12257949
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  12257890 ttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 12257949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 122 - 178
Target Start/End: Original strand, 26949027 - 26949083
Alignment:
Q  122 tatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| |||||||| |||||||||||||||||||||||| ||||||| ||||||||    
T  26949027 tatttcataattcccatcctccaaaccctaaccatgattttctaatttccctcctcc 26949083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 4585622 - 4585656
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  4585622 atatttcctaattcccctcctccaaaccctaacca 4585656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 12257972 - 12258006
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  12257972 atatttcctaattcccctcctccaaaccctaacca 12258006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 13458602 - 13458568
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  13458602 atatttcctaattcccctcctccaaaccctaacca 13458568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 16647542 - 16647576
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  16647542 atatttcctaattcccctcctccaaaccctaacca 16647576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 35860452 - 35860375
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| ||||||||||||    
T  35860452 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaac 35860375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 36094377 - 36094309
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  36094377 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 36094309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 119
Target Start/End: Original strand, 851166 - 851198
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||| |||||||||||||||||||||||    
T  851166 ttgtagccacttttccctccttcaaaacctaac 851198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 2e-36; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 19640858 - 19640982
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  19640858 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 19640956  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  19640957 tccaaaccctaaccatgatttcctaa 19640982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 19839451 - 19839575
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  19839451 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcc 19839549  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  19839550 tccaaaccctaaccatgatttcctaa 19839575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 26452847 - 26452971
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||| ||||||    
T  26452847 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaatttccctcc 26452945  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  26452946 tccaaaccctaaccatgatttcctaa 26452971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 36440238 - 36440114
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||    
T  36440238 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaactatatttcctaattcccctcc 36440140  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  36440139 tccaaaccctaaccatgatttcctaa 36440114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 13905753 - 13905841
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  13905753 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 13905841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 178
Target Start/End: Complemental strand, 35433231 - 35433140
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35433231 ttgtagccacttttccctccttcaaaacctaaccatatttcttaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 35433140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 5001255 - 5001131
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  5001255 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccttatttcctaattcccctcc 5001157  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  5001156 tccaaaccctaaccatgatttcctaa 5001131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 5012925 - 5012801
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||  |||||||||||||||||||    
T  5012925 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccttatttcctaattcccctcc 5012827  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  5012826 tccaaaccctaaccatgatttcctaa 5012801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 13899855 - 13899943
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  13899855 tagccacttttccctccttcaaaacctaaccatatttcctaattaccctcctccaaaccctaaccatgatttcctaatttccctcctcc 13899943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 40 - 166
Target Start/End: Complemental strand, 980613 - 980487
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccct 138  Q
    |||||||||| ||||||||||   || ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||    
T  980613 tctcttattcctaaacaaagcttggttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccct 980515  T
Q  139 cctccaaaccctaaccatgatttcctaa 166  Q
    |||| |||||||||||||||||||||||    
T  980514 cctcgaaaccctaaccatgatttcctaa 980487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 26453390 - 26453477
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctc 177  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  26453390 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctc 26453477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 90 - 177
Target Start/End: Original strand, 40603226 - 40603313
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctc 177  Q
    |||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  40603226 tagccacttttctctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctc 40603313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 32287279 - 32287360
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  32287279 ttttccctccttcaaaacctaactatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcc 32287360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 40602683 - 40602807
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||||||||||||| || |||||||||| |||| | ||||||||||||||||| ||||| |||||| |||||| ||||||    
T  40602683 tcttattcctaaacaaagctttgtcgccctaattttaacctaatattt-tagcaacttttccctccttcaaaatctaaccatattttctaatttccctcc 40602781  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  40602782 tccaaaccctaaccatgatttcctaa 40602807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 19641057 - 19641144
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19641057 acctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaa 19641144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 19839650 - 19839737
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  19839650 acctaatattt-tagcaacttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctagccatgatttcctaa 19839737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 32287408 - 32287499
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  32287408 ttgtaaccacttttccctccttcaaaacctaatcatatttcctaattcccctcctccaaaccctaaccatgatctcctaatttccctcctcc 32287499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 40603325 - 40603404
Alignment:
Q  99 ttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  40603325 ttccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 40603404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 97 - 178
Target Start/End: Complemental strand, 1925725 - 1925644
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  1925725 ttttccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccattatttcctaatttccctcctcc 1925644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 13905855 - 13905932
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  13905855 ccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatcatttcctaatttccctcctcc 13905932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 26453492 - 26453569
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26453492 ccctcctttaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 26453569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 42111803 - 42111679
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| || | | ||||||||||||||||||||||| |||||| |||||||||||||    
T  42111803 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-taacaacttttccctccttcaaaacctaaccatattttctaattcccctcc 42111705  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    |||||||||||||||| |||||||||    
T  42111704 tccaaaccctaaccatcatttcctaa 42111679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 180195 - 180282
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  180195 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 180282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 980121 - 980034
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  980121 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 980034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 2444108 - 2444195
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  2444108 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 2444195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 166
Target Start/End: Complemental strand, 21591319 - 21591195
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||  |||||||||||||    
T  21591319 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatattctctaattcccctcc 21591221  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    | |||| |||||||||||||||||||    
T  21591220 ttcaaagcctaaccatgatttcctaa 21591195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 1501779 - 1501866
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||    
T  1501779 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaacaatgattttctaa 1501866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 13899085 - 13899172
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  13899085 acctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaaccatgatttcctaa 13899172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 35433082 - 35433010
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  35433082 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaactctaaccatgat 35433010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 27999746 - 27999659
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctc 174  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||||||||||||| ||||    
T  27999746 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctc 27999659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 28090480 - 28090393
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctc 174  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||||||||||||| ||||    
T  28090480 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctc 28090393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 87 - 174
Target Start/End: Complemental strand, 28096803 - 28096716
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctc 174  Q
    ||||||||| |||||||||||||| |||||||| ||||||| | |||||||||||||||||||||| |||||||||||||||| ||||    
T  28096803 ttgtagccacttttccctccttcataacctaaccatatttcatgattcccctcctccaaaccctaatcatgatttcctaatttccctc 28096716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 204367 - 204436
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  204367 ttttccctccttcaaaacctaaccatattccctaattcacctcctccaaaccctaaccatgatttcctaa 204436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 87 - 159
Target Start/End: Complemental strand, 1925586 - 1925514
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||| ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  1925586 ttgtagccacttttctctccttcaaaacctaaccatatttcctaattccccttctccaaaccctaaccatgat 1925514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 78 - 166
Target Start/End: Original strand, 14039702 - 14039789
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14039702 acctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcctccaaaccctaacaatgatttcctaa 14039789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 97 - 178
Target Start/End: Original strand, 32287015 - 32287096
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||||||||| |||||||||| | ||||||| ||||| ||||||||||||||||||||||||| ||||||| ||||||||    
T  32287015 ttttccctcctttaaaacctaactacatttcctgattcctctcctccaaaccctaaccatgattttctaatttccctcctcc 32287096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 32287142 - 32287200
Alignment:
Q  120 aatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  32287142 aatattttctaattcccctcctccaaaccttaaccatgatttcctaatttccctcctcc 32287200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 2296966 - 2297042
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  2296966 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 2297042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 25643727 - 25643803
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  25643727 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 25643803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 980327 - 980282
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  980327 atatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 980282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 6120827 - 6120903
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||| ||||||| ||||||||||||| |||||||    
T  6120827 cctaatattt-tagcaacttttccctcctttaaaacctaaccatattttctaattctcctcctccaaaccttaaccat 6120903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 2297065 - 2297099
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  2297065 atatttcctaattcccctcctccaaaccctaacca 2297099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 6120926 - 6120960
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  6120926 atatttcctaattcccctcctccaaaccctaacca 6120960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 25643826 - 25643860
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  25643826 atatttcctaattcccctcctccaaaccctaacca 25643860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 26453251 - 26453327
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | ||||||||||||||||||||||| |||||||    
T  26453251 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaaccatatttc 26453327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 1271945 - 1271989
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  1271945 ttattcttaaacaaagcactgttgccctaattccacctaatattt 1271989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 97 - 156
Target Start/End: Original strand, 13900059 - 13900121
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaatt---cccctcctccaaaccctaaccat 156  Q
    |||||| ||||| |||||||||| |||||||||||||   | |||||||||||||||||||||    
T  13900059 ttttccatcctttaaaacctaaccatatttcctaattctcctcctcctccaaaccctaaccat 13900121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 30915407 - 30915455
Alignment:
Q  40 tctcttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||| ||||| |||||||||  |||||||||||    
T  30915407 tctcttattcttaaacaaagaactgttgccctaattccacctaatattt 30915455  T

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Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 13900144 - 13900178
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||| ||||||||||||||||||||||||||||    
T  13900144 atattttctaattcccctcctccaaaccctaacca 13900178  T

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Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 13899720 - 13899788
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  13899720 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 13899788  T

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Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 127
Target Start/End: Original strand, 40603087 - 40603163
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttc 127  Q
    ||||||||||  ||| ||||||||| || ||| |||||| |||| | ||||||||||||||||||||||| |||||||    
T  40603087 taaacaaagctttgttgccctaattttaaccttatattt-tagcaacttttccctccttcaaaacctaaccatatttc 40603163  T

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Target: scaffold0121 (Bit Score: 77; Significance: 6e-36; HSPs: 5)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 90 - 178
Target Start/End: Original strand, 41187 - 41275
Alignment:
Q  90 tagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41187 tagccacttttccctccttcaaaacctaaccatatttcctaattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41275  T

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Target: scaffold0121; HSP #2
Raw Score: 70; E-Value: 9e-32
Query Start/End: Original strand, 42 - 166
Target Start/End: Original strand, 40777 - 40901
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcc 140  Q
    |||||||| ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||||||    
T  40777 tcttattcctaaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccatcaaaacctaaccatatttcctaatttccctcc 40875  T
Q  141 tccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||||||    
T  40876 tccaaaccctaaccatgatttcctaa 40901  T

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Target: scaffold0121; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 41289 - 41366
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  41289 ccctccttcaaaacctaaccatatttcataattcccctcctccaaaccctaaccatgatttcctaatttccctcctcc 41366  T

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Target: scaffold0121; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 101 - 178
Target Start/End: Original strand, 41380 - 41457
Alignment:
Q  101 ccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  41380 ccctccttcaaaacctaaccatattttctaattcccctcctccaaaccctaaccatgatttcctaatttccatcctcc 41457  T

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Target: scaffold0121; HSP #5
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 41047 - 41115
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  41047 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 41115  T

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Target: scaffold0160 (Bit Score: 76; Significance: 2e-35; HSPs: 3)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 36076 - 36167
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||||||| ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  36076 ttgtagccacttttccctccttcaaaacctaaccatatttcctaattcccatcctccaaaccctaaccatgatttcctaatttccctcctcc 36167  T

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Target: scaffold0160; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 178
Target Start/End: Original strand, 36225 - 36315
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaattttcctcctcc 178  Q
    ||||| ||| |||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  36225 ttgtacccacttttccctcctttaaaacctaaccatatttcctaattcccctcctccaaa-cctaaccatgatttcctaatttccctcctcc 36315  T

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Target: scaffold0160; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 87 - 159
Target Start/End: Original strand, 36373 - 36445
Alignment:
Q  87 ttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgat 159  Q
    ||||||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  36373 ttgtagccacttttccctccttcaaaacctaaccatatatcctaattcccctcctccaaaccctaaccatgat 36445  T

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Target: scaffold0097 (Bit Score: 65; Significance: 9e-29; HSPs: 3)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 78 - 166
Target Start/End: Complemental strand, 44731 - 44644
Alignment:
Q  78 acctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  44731 acctaatattt-tagcaacttttccctccttcaaaacctaaccatatttcctaattcccctcctcgaaaccctaaccatgatttcctaa 44644  T

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Target: scaffold0097; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 48739 - 48828
Alignment:
Q  42 tcttattcttaaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaa 131  Q
    |||||||| |||||||||   ||| ||||||||| || |||||||||| |||| |||||||||| |||||||||||||| |||||||||||    
T  48739 tcttattcctaaacaaagttttgttgccctaattttaacctaatattt-tagcaatttttcccttcttcaaaacctaaccatatttcctaa 48828  T

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Target: scaffold0097; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Complemental strand, 51585 - 51517
Alignment:
Q  51 taaacaaagcactgtcgccctaattata-cctaatatttgtagccatttttccctccttcaaaacctaac 119  Q
    ||||||||||  ||| ||||||||| || |||||||||| |||| | |||||||||||||||||||||||    
T  51585 taaacaaagctttgttgccctaattttaacctaatattt-tagcaacttttccctccttcaaaacctaac 51517  T

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Target: scaffold1113 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold1113
Description:

Target: scaffold1113; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 97 - 166
Target Start/End: Complemental strand, 2557 - 2488
Alignment:
Q  97 ttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccatgatttcctaa 166  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  2557 ttttccctccttcaaaacctaaccatatttcctaattcccctcctctaaaccctaaccatgatttcctaa 2488  T

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Target: scaffold0642 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0642
Description:

Target: scaffold0642; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 293 - 369
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  293 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 369  T

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Target: scaffold0642; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 392 - 426
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  392 atatttcctaattcccctcctccaaaccctaacca 426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 183 - 107
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||  |||||||||||||| |||||||||||||||||||||    
T  183 cctaatattt-tagcaacttttccctcctttaaaacctaagcatatttcctaattctcctcctccaaaccctaaccat 107  T

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Target: scaffold0374; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 84 - 50
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  84 atatttcctaattcccctcctccaaaccctaacca 50  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Original strand, 10204 - 10280
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  10204 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 10280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Original strand, 10303 - 10337
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  10303 atatttcctaattcccctcctccaaaccctaacca 10337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 28776 - 28700
Alignment:
Q  79 cctaatatttgtagccatttttccctccttcaaaacctaacaatatttcctaattcccctcctccaaaccctaaccat 156  Q
    |||||||||| |||| | |||||||||||| |||||||||| |||||||||||||| ||||||||||||| |||||||    
T  28776 cctaatattt-tagcaacttttccctcctttaaaacctaaccatatttcctaattctcctcctccaaaccttaaccat 28700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 121 - 155
Target Start/End: Complemental strand, 28677 - 28643
Alignment:
Q  121 atatttcctaattcccctcctccaaaccctaacca 155  Q
    |||||||||||||||||||||||||||||||||||    
T  28677 atatttcctaattcccctcctccaaaccctaacca 28643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 29292 - 29248
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  29292 ttattcttaaacaaagcactgttgccctaattccacctaatattt 29248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 35545 - 35501
Alignment:
Q  44 ttattcttaaacaaagcactgtcgccctaattatacctaatattt 88  Q
    |||||||||||||||||||||| |||||||||  |||||||||||    
T  35545 ttattcttaaacaaagcactgttgccctaattccacctaatattt 35501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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