View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11172_low_14 (Length: 271)
Name: NF11172_low_14
Description: NF11172
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11172_low_14 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 51196395 - 51196649
Alignment:
| Q |
1 |
agaatgttcaaactttttagaaaaatacactatcaatttattgactttttgaatagttggttaattatgctcttgtatcaacggttatggttattctcat |
100 |
Q |
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| T |
51196395 |
agaatgttcaaactttttagaaaaatacactatcaatttattgactttttgaatagttggttaattatgctcttgtatcaacggttatggttattctcat |
51196494 |
T |
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| Q |
101 |
cacttgcaattatttttattaatccataacaacatacaaagagaaacactatgaatcttaaaatccatgaacaaaaggatgaatgaagtttatttagtta |
200 |
Q |
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| T |
51196495 |
cacttgcaattattgttattaatccataacaacatacaaagagaaacactatgaatcttaaaatccatgaacaaaaggatgaatgaagtttatttagtta |
51196594 |
T |
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| Q |
201 |
ctctactaacacagttgctgcatttttaaaatttagtaatatgatctcaggtttt |
255 |
Q |
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| T |
51196595 |
ctctactaacacagttgctgcattttcaaaatttagtaatatgatctcaggtttt |
51196649 |
T |
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