View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11174_high_5 (Length: 328)
Name: NF11174_high_5
Description: NF11174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11174_high_5 |
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Alignment Details
Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 16 - 293
Target Start/End: Original strand, 46630246 - 46630523
Alignment:
| Q |
16 |
aaggacccctaccccacaaacttcttctaattttctatagttcatgacccctacaataaaccttcaactcttaatacaaaattaattttgagtattttac |
115 |
Q |
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| T |
46630246 |
aaggacacctaccccacaaacttcttctaattttctatagttcatgacccctacaataaaccttcaactcttaatacaaaattaattttgagtattttac |
46630345 |
T |
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| Q |
116 |
aaggatgctgcatgttcttcacctattatcacatgctttctgatccaccccatcccatattaacccacatttgaaatcaccaaaacacccttgagtgaca |
215 |
Q |
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| T |
46630346 |
acggatgctgcatgttcttcacctattatcacatgctttctgatccaccccatcccatattaacccacatttgaaatcaccaaaacacccttgagtgaca |
46630445 |
T |
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| Q |
216 |
gtgatttattccctatactgtcaatgtggggacaattnnnnnnnttcttttacattttagagggtaaggaatcttttt |
293 |
Q |
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|| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
46630446 |
gtcatttattccctatactgtcaatgtggggacaattaaaaaaattcttttacattttagagggtaaggaatcttttt |
46630523 |
T |
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