View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11175_high_22 (Length: 332)

Name: NF11175_high_22
Description: NF11175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11175_high_22
NF11175_high_22
[»] chr4 (15 HSPs)
chr4 (1-323)||(570010-570332)
chr4 (30-151)||(55505252-55505373)
chr4 (30-158)||(1524630-1524758)
chr4 (37-161)||(8187245-8187369)
chr4 (30-77)||(553384-553431)
chr4 (39-86)||(7226039-7226086)
chr4 (31-78)||(7307764-7307811)
chr4 (106-218)||(3438786-3438898)
chr4 (30-85)||(644728-644783)
chr4 (106-161)||(6006148-6006203)
chr4 (36-78)||(659615-659657)
chr4 (30-96)||(8184177-8184243)
chr4 (38-79)||(1513559-1513600)
chr4 (30-79)||(12121604-12121653)
chr4 (30-78)||(558402-558450)
[»] chr8 (4 HSPs)
chr8 (1-95)||(21235445-21235539)
chr8 (38-150)||(34936318-34936430)
chr8 (121-215)||(32151068-32151162)
chr8 (36-85)||(28246446-28246495)
[»] chr6 (6 HSPs)
chr6 (34-128)||(12102160-12102254)
chr6 (150-190)||(12102120-12102160)
chr6 (14-77)||(28934954-28935017)
chr6 (36-77)||(6394769-6394810)
chr6 (4-64)||(6603323-6603383)
chr6 (4-64)||(7119075-7119135)
[»] chr2 (2 HSPs)
chr2 (30-158)||(45245232-45245360)
chr2 (3-151)||(44575615-44575763)
[»] chr3 (2 HSPs)
chr3 (30-161)||(51113928-51114059)
chr3 (30-94)||(51121040-51121104)
[»] chr1 (1 HSPs)
chr1 (30-78)||(29719070-29719118)


Alignment Details
Target: chr4 (Bit Score: 315; Significance: 1e-177; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 1 - 323
Target Start/End: Complemental strand, 570332 - 570010
Alignment:
Q  1 agcattgttattatgttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  570332 agcattgttattatgttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataa 570233  T
Q  101 aaatattgttgactcgatgatattatcaagaccatcattgagaaagataactgttccacctcgttaccgtttcaacaacaacaagagggagctcttcttg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  570232 aaatattgttgactcgatgatattatcaagaccatcattgagaaagataactgttccacctcgttaccgtttcaacaacaacaagagggagctcttcttg 570133  T
Q  201 ggtcatgtatgccttctcggctagtattttgcaactcttctgccgaagttttccttctctgcttgtattttgcaacttttctgctgaagtttgaatgttg 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  570132 ggtcatgtatgccttctcggctagtattttgcaactcttctgccgaagttttccttctctgcttgtattttgcaacttttctgctgaagtttgaattttg 570033  T
Q  301 aaataaaatgtttttgttctctg 323  Q
    |||||||||||||||||| ||||    
T  570032 aaataaaatgtttttgttttctg 570010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 55505252 - 55505373
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataaaaatattgttgactcgatgatattatcaa 129  Q
    ||||| || ||| ||||||||||||||||||| || |||||||| |||||    ||  ||||||||||||  | | |||||||||| ||| |||| ||||    
T  55505252 gtgaaacacgtgttagaaaactgcacacaactaagagagatcaacttgaacggttgtgataaagtgcatactagtgttgttgactcaatggtattttcaa 55505351  T
Q  130 gaccatcattgagaaagataac 151  Q
    | ||||||||||||||||||||    
T  55505352 ggccatcattgagaaagataac 55505373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 1524630 - 1524758
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataaaaatattgttgactcgatgatattatcaa 129  Q
    |||||| ||||| |||||||||||||||||||||| ||||| ||||||| |   || | |||||| |||   |   |||||| ||| ||| |||||||||    
T  1524630 gtgaattatgtgatagaaaactgcacacaactgagagagattaatttgaggggttgttgtaaagttcatgctagctttgttgcctcaatgctattatcaa 1524729  T
Q  130 gaccatcattgagaaagataactgttcca 158  Q
    |||||||||||||| |||||| |||||||    
T  1524730 gaccatcattgagagagataattgttcca 1524758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 37 - 161
Target Start/End: Original strand, 8187245 - 8187369
Alignment:
Q  37 atgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataaaaatattgttgactcgatgatattatcaagaccatc 136  Q
    |||||||| |||||||||| |||||||  ||  ||||| ||| |  ||||||||| ||||||    || ||||||||||||||||||| ||||| |||||    
T  8187245 atgtggtaaaaaactgcacgcaactgacagaagtcaatctgaggcgctgctataatgtgcatcctgatgttgttgactcgatgatattttcaaggccatc 8187344  T
Q  137 attgagaaagataactgttccacct 161  Q
      |||||||||||| ||| ||||||    
T  8187345 gctgagaaagataattgtcccacct 8187369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 77
Target Start/End: Complemental strand, 553431 - 553384
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttg 77  Q
    |||||||||||||||||||||||||||||||| || |||||| |||||    
T  553431 gtgaatcatgtggtagaaaactgcacacaacttagagagatcgatttg 553384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 39 - 86
Target Start/End: Original strand, 7226039 - 7226086
Alignment:
Q  39 gtggtagaaaactgcacacaactgagggagatcaatttgaagaactgc 86  Q
    ||||||||||||||||  |||||||| |||||||||||||||||||||    
T  7226039 gtggtagaaaactgcaagcaactgagagagatcaatttgaagaactgc 7226086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 78
Target Start/End: Complemental strand, 7307811 - 7307764
Alignment:
Q  31 tgaatcatgtggtagaaaactgcacacaactgagggagatcaatttga 78  Q
    |||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  7307811 tgaagcatgtggtagaaaactgcacgcaactgagggaaatcaatttga 7307764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 218
Target Start/End: Original strand, 3438786 - 3438898
Alignment:
Q  106 ttgttgactcgatgatattatcaagaccatcattgagaaagataactgttccacctcgttaccgtttcaacaacaacaagagggagctcttcttgggtca 205  Q
    ||||||||  |||| |||| ||||  ||||||||||||||| |||||| |||||||||||| | |||||  | ||| |||||||| || ||| || |||     
T  3438786 ttgttgacgagatggtattttcaaagccatcattgagaaaggtaactgctccacctcgttatcatttcagtagcaaaaagagggaacttttcctgcgtcg 3438885  T
Q  206 tgtatgccttctc 218  Q
    || ||||||||||    
T  3438886 tggatgccttctc 3438898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 85
Target Start/End: Complemental strand, 644783 - 644728
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactg 85  Q
    ||||| |||||||| ||||| |||||||||||||| |||||| |||||||| ||||    
T  644783 gtgaaacatgtggttgaaaaatgcacacaactgagagagatcgatttgaagtactg 644728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 161
Target Start/End: Complemental strand, 6006203 - 6006148
Alignment:
Q  106 ttgttgactcgatgatattatcaagaccatcattgagaaagataactgttccacct 161  Q
    ||||||||| |||| ||||  |||| |||||||||||||||||||||| |||||||    
T  6006203 ttgttgacttgatggtatttacaaggccatcattgagaaagataactgctccacct 6006148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 659657 - 659615
Alignment:
Q  36 catgtggtagaaaactgcacacaactgagggagatcaatttga 78  Q
    |||| ||||||||||||||| || |||||||||||||||||||    
T  659657 catgcggtagaaaactgcacgcagctgagggagatcaatttga 659615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 96
Target Start/End: Original strand, 8184177 - 8184243
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgc 96  Q
    ||||| |||||| ||||||| |||||||||||||  | ||||||||||| ||||||  |||||||||    
T  8184177 gtgaagcatgtgctagaaaattgcacacaactgaaagtgatcaatttgaggaactgtgataaagtgc 8184243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 1513559 - 1513600
Alignment:
Q  38 tgtggtagaaaactgcacacaactgagggagatcaatttgaa 79  Q
    |||| ||||||| |||||||||||||| ||||||||||||||    
T  1513559 tgtgctagaaaaatgcacacaactgagagagatcaatttgaa 1513600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 12121604 - 12121653
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaa 79  Q
    ||||| |||||||||||||| ||||||||||| || |||||| |||||||    
T  12121604 gtgaagcatgtggtagaaaaatgcacacaactaagagagatcgatttgaa 12121653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 558450 - 558402
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttga 78  Q
    ||||| |||||| ||||||||||||||||| |||| || ||||||||||    
T  558450 gtgaagcatgtgctagaaaactgcacacaaatgagagaaatcaatttga 558402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 5e-44; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 21235539 - 21235445
Alignment:
Q  1 agcattgttattatgttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtg 95  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21235539 agcattgttattatgtcactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtg 21235445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 38 - 150
Target Start/End: Original strand, 34936318 - 34936430
Alignment:
Q  38 tgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataaaaatattgttgactcgatgatattatcaagaccatca 137  Q
    |||||| ||||| ||||||||| |||||||||||||||||| ||||||| |||||||| ||   ||| |||||  ||||||||||   ||||| ||||      
T  34936318 tgtggttgaaaattgcacacaattgagggagatcaatttgaggaactgccataaagtggatgctaatgttgttacctcgatgataacttcaaggccattg 34936417  T
Q  138 ttgagaaagataa 150  Q
    |||||||||||||    
T  34936418 ttgagaaagataa 34936430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 32151162 - 32151068
Alignment:
Q  121 tattatcaagaccatcattgagaaagataactgttccacctcgttaccgtttcaacaacaacaagagggagctcttcttgggtcatgtatgcctt 215  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||   |||||   |||| || ||| | ||||||||| |||||| |||||||    
T  32151162 tattttcaaggccatcattgagaaagataactgctccacctcgttatgatttcagtgacaaaaaaaggaaactcttcttgcgtcatggatgcctt 32151068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 28246446 - 28246495
Alignment:
Q  36 catgtggtagaaaactgcacacaactgagggagatcaatttgaagaactg 85  Q
    |||||||| ||||| |||||||||||||| ||| ||||||||||| ||||    
T  28246446 catgtggttgaaaaatgcacacaactgagagaggtcaatttgaagtactg 28246495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 128
Target Start/End: Complemental strand, 12102254 - 12102160
Alignment:
Q  34 atcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataaaaatattgttgactcgatgatattatca 128  Q
    ||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||| | | ||| |||||||||||||||||||||||    
T  12102254 atcatgtggtagaaaactgcacacaactgagagagagcaatctgaagaactgctataaagtgcttcataatgttgttgactcgatgatattatca 12102160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 12102160 - 12102120
Alignment:
Q  150 actgttccacctcgttaccgtttcaacaacaacaagaggga 190  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  12102160 actgttccacctcgttatcgtttcaacaacaaaaagaggga 12102120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 14 - 77
Target Start/End: Complemental strand, 28935017 - 28934954
Alignment:
Q  14 tgttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttg 77  Q
    |||||| |||| ||| ||||| |||||||||||||| ||||||||||| || |||||| |||||    
T  28935017 tgttacaaaaaaaggagtgaagcatgtggtagaaaattgcacacaactaagagagatctatttg 28934954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 6394810 - 6394769
Alignment:
Q  36 catgtggtagaaaactgcacacaactgagggagatcaatttg 77  Q
    |||||||||||||||||||||||| |||| ||||| ||||||    
T  6394810 catgtggtagaaaactgcacacaattgagagagattaatttg 6394769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 6603323 - 6603383
Alignment:
Q  4 attgttattatgttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgag 64  Q
    ||||||||||||| ||  | | ||| ||||| ||||||||||||||||||| |||||||||    
T  6603323 attgttattatgtcacagagaaaggagtgaaacatgtggtagaaaactgcaaacaactgag 6603383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 64
Target Start/End: Complemental strand, 7119135 - 7119075
Alignment:
Q  4 attgttattatgttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgag 64  Q
    ||||||||||||| || |||| ||  ||||| ||||||| |||||||||||||||| ||||    
T  7119135 attgttattatgtcacaaaaaaagaagtgaaacatgtggaagaaaactgcacacaattgag 7119075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 45245232 - 45245360
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataaaaatattgttgactcgatgatattatcaa 129  Q
    ||||| |||||||||||||| ||||||||||| |  ||||||||||||| | |||||| | ||||||||   ||| || ||| ||||||| |||| ||||    
T  45245232 gtgaaacatgtggtagaaaattgcacacaacttacagagatcaatttgaggcactgctttcaagtgcatgctaatgttattgtctcgatggtattttcaa 45245331  T
Q  130 gaccatcattgagaaagataactgttcca 158  Q
    | ||||| |||| |||||||| |||||||    
T  45245332 ggccatcgttgaaaaagataaatgttcca 45245360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 151
Target Start/End: Original strand, 44575615 - 44575763
Alignment:
Q  3 cattgttattatgttactaaaagaggcgtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataaaa 102  Q
    |||||| ||||||||||  | | |||| |||||||||||||||||||||||||||||| ||| ||| |||||||||  || ||  |||| ||||||        
T  44575615 cattgtcattatgttaccgataaaggcttgaatcatgtggtagaaaactgcacacaaccgagagagctcaatttgagaaattgtgataatgtgcatcgtg 44575714  T
Q  103 atattgttgactcgatgatattatcaagaccatcattgagaaagataac 151  Q
    || || ||| |||| ||||| | ||||| ||||||||||||||| ||||    
T  44575715 atgttcttgcctcgttgatactttcaaggccatcattgagaaagttaac 44575763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 161
Target Start/End: Original strand, 51113928 - 51114059
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagtgcataaaaatattgttgactcgatgatattatcaa 129  Q
    ||||| |||||||||||||| |||||| |||| || ||||| ||||| |||   || | ||||||||||   ||| |||||| ||| |||||||| ||||    
T  51113928 gtgaagcatgtggtagaaaaatgcacaaaactaagagagattaatttaaagggttgttttaaagtgcatgctaattttgttgcctcaatgatattttcaa 51114027  T
Q  130 gaccatcattgagaaagataactgttccacct 161  Q
    | |||||||||||| | ||||| | |||||||    
T  51114028 ggccatcattgagagaaataacagctccacct 51114059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 94
Target Start/End: Original strand, 51121040 - 51121104
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttgaagaactgctataaagt 94  Q
    ||||| |||||||||||||||||||||||| |||| | |||||| |||| | | |||||||||||    
T  51121040 gtgaaacatgtggtagaaaactgcacacaattgagagtgatcaacttgaggtattgctataaagt 51121104  T

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Target: chr1 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 29719070 - 29719118
Alignment:
Q  30 gtgaatcatgtggtagaaaactgcacacaactgagggagatcaatttga 78  Q
    ||||| ||||||||  |||||||||  ||||||||||||||||||||||    
T  29719070 gtgaaacatgtggttcaaaactgcaagcaactgagggagatcaatttga 29719118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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