View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF11175_low_29 (Length: 273)
Name: NF11175_low_29
Description: NF11175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF11175_low_29 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 22470109 - 22469855
Alignment:
| Q |
1 |
gaaatataaatgcaccctgacccacaagtacagtaacaattcagaaaacatagcacagaaacacaagttgtagagacaaacgaatccaatgagaagcata |
100 |
Q |
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| T |
22470109 |
gaaatataaatgcaccctgacccacaagtacagtaacaattcagaaaacatagcacagaaacacaagttgtagagacaaacgaatccaatgagaagcata |
22470010 |
T |
|
| Q |
101 |
tgaatttattgatataattaatgtgttcacgcaggaaggggtgatctttctcatcttcatttccttagctactatgaatgctgaatctttgctcagtggt |
200 |
Q |
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||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
22470009 |
cgaatttattgatatagttaatgtgttcacgcaggatggggtgatctttctcatcttcatttccttagctactataaatgctgaatctttgctcagtggt |
22469910 |
T |
|
| Q |
201 |
atgattttcaatttaatgctaaaaatgagccacaatgttccacagaaattactta |
255 |
Q |
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||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
22469909 |
atgattttcaatttaatgctaaaaatgtgccacaatgttccacagaaattactta |
22469855 |
T |
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