View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF11179_high_9 (Length: 344)

Name: NF11179_high_9
Description: NF11179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF11179_high_9
NF11179_high_9
[»] chr5 (15 HSPs)
chr5 (1-251)||(32463613-32463863)
chr5 (1-146)||(32457272-32457417)
chr5 (255-338)||(18033982-18034065)
chr5 (255-338)||(22512305-22512388)
chr5 (255-338)||(7617133-7617216)
chr5 (255-338)||(2614666-2614749)
chr5 (255-338)||(33801469-33801552)
chr5 (255-330)||(33855068-33855143)
chr5 (255-338)||(41334680-41334763)
chr5 (257-337)||(25915006-25915085)
chr5 (255-338)||(38470579-38470662)
chr5 (257-338)||(5256997-5257078)
chr5 (255-338)||(32473411-32473494)
chr5 (255-338)||(17208074-17208157)
chr5 (254-306)||(15409527-15409579)
[»] scaffold0161 (1 HSPs)
scaffold0161 (3-149)||(23139-23285)
[»] chr4 (37 HSPs)
chr4 (255-338)||(1771283-1771366)
chr4 (255-335)||(12496956-12497036)
chr4 (254-335)||(27550308-27550389)
chr4 (257-338)||(43514703-43514784)
chr4 (255-338)||(25051693-25051776)
chr4 (255-338)||(27864564-27864647)
chr4 (255-338)||(28982839-28982922)
chr4 (255-338)||(33703141-33703224)
chr4 (255-338)||(55966363-55966446)
chr4 (255-338)||(23035980-23036063)
chr4 (255-338)||(35017733-35017815)
chr4 (255-338)||(48463467-48463550)
chr4 (255-337)||(27316731-27316813)
chr4 (257-338)||(43949818-43949900)
chr4 (257-338)||(27893859-27893940)
chr4 (258-338)||(23204795-23204875)
chr4 (255-338)||(55272393-55272476)
chr4 (257-338)||(39631102-39631184)
chr4 (257-338)||(31680904-31680985)
chr4 (255-338)||(711960-712043)
chr4 (255-338)||(17619169-17619252)
chr4 (255-337)||(21687006-21687088)
chr4 (255-337)||(28988473-28988555)
chr4 (256-338)||(41878407-41878489)
chr4 (257-338)||(3756263-3756344)
chr4 (257-338)||(35037007-35037088)
chr4 (257-338)||(43735744-43735825)
chr4 (255-335)||(960890-960970)
chr4 (255-338)||(32728357-32728440)
chr4 (255-312)||(46827749-46827806)
chr4 (255-306)||(30189273-30189324)
chr4 (255-338)||(45490330-45490413)
chr4 (297-335)||(51512285-51512323)
chr4 (250-307)||(50526084-50526141)
chr4 (255-322)||(41847971-41848038)
chr4 (255-338)||(48435596-48435679)
chr4 (259-313)||(54473455-54473509)
[»] chr3 (24 HSPs)
chr3 (255-338)||(54246165-54246248)
chr3 (255-338)||(24688419-24688502)
chr3 (255-338)||(42100688-42100771)
chr3 (256-338)||(42394436-42394518)
chr3 (255-338)||(25413681-25413764)
chr3 (255-338)||(40808865-40808948)
chr3 (255-338)||(46941053-46941136)
chr3 (256-338)||(54237097-54237179)
chr3 (255-338)||(45126945-45127028)
chr3 (255-338)||(47191043-47191125)
chr3 (257-338)||(53581875-53581956)
chr3 (255-338)||(4190282-4190365)
chr3 (255-338)||(9434124-9434207)
chr3 (255-338)||(36150130-36150213)
chr3 (256-338)||(40480750-40480832)
chr3 (255-338)||(53273701-53273784)
chr3 (257-338)||(1078229-1078309)
chr3 (257-338)||(27748565-27748646)
chr3 (255-338)||(10457909-10457992)
chr3 (255-338)||(25996268-25996351)
chr3 (259-338)||(29558251-29558330)
chr3 (255-338)||(34791829-34791912)
chr3 (255-338)||(51757593-51757676)
chr3 (255-338)||(52627994-52628077)
[»] scaffold0157 (1 HSPs)
scaffold0157 (255-335)||(23441-23521)
[»] chr6 (18 HSPs)
chr6 (255-338)||(7273352-7273435)
chr6 (255-338)||(9698350-9698433)
chr6 (255-338)||(26670026-26670109)
chr6 (255-338)||(26466799-26466882)
chr6 (257-338)||(24204004-24204085)
chr6 (257-338)||(30735984-30736065)
chr6 (255-338)||(13743238-13743321)
chr6 (255-338)||(13748738-13748821)
chr6 (255-338)||(21279929-21280012)
chr6 (255-338)||(30014343-30014426)
chr6 (255-338)||(7292747-7292830)
chr6 (255-338)||(7367549-7367632)
chr6 (255-338)||(3213400-3213483)
chr6 (255-338)||(21293694-21293777)
chr6 (257-338)||(27441544-27441625)
chr6 (255-338)||(33242403-33242486)
chr6 (255-322)||(31109255-31109322)
chr6 (255-338)||(33253913-33253996)
[»] chr2 (30 HSPs)
chr2 (255-338)||(1750414-1750497)
chr2 (256-338)||(19047158-19047240)
chr2 (255-338)||(12302270-12302353)
chr2 (255-338)||(16096747-16096830)
chr2 (257-337)||(43490419-43490499)
chr2 (255-338)||(30838632-30838715)
chr2 (255-338)||(4764743-4764826)
chr2 (255-338)||(43335780-43335863)
chr2 (257-334)||(33229303-33229381)
chr2 (255-338)||(43114557-43114640)
chr2 (257-338)||(11825671-11825752)
chr2 (257-338)||(6518486-6518566)
chr2 (257-338)||(41281991-41282072)
chr2 (255-338)||(12415477-12415560)
chr2 (255-338)||(12427537-12427620)
chr2 (255-338)||(16803968-16804051)
chr2 (255-338)||(16843250-16843333)
chr2 (255-312)||(966877-966934)
chr2 (257-338)||(8896600-8896681)
chr2 (255-338)||(18491705-18491788)
chr2 (256-307)||(34817824-34817875)
chr2 (255-294)||(42849907-42849946)
chr2 (255-337)||(14285676-14285758)
chr2 (255-338)||(42026767-42026852)
chr2 (257-338)||(4299437-4299518)
chr2 (255-338)||(13780752-13780835)
chr2 (255-338)||(34895758-34895841)
chr2 (257-298)||(7070418-7070459)
chr2 (293-334)||(39149313-39149354)
chr2 (255-307)||(20700945-20700997)
[»] chr1 (26 HSPs)
chr1 (255-338)||(43571103-43571186)
chr1 (255-338)||(5489776-5489859)
chr1 (255-338)||(48498979-48499062)
chr1 (257-338)||(4401329-4401411)
chr1 (255-331)||(24769523-24769599)
chr1 (255-335)||(50448280-50448360)
chr1 (257-338)||(2497579-2497660)
chr1 (257-338)||(7447828-7447908)
chr1 (255-338)||(44112677-44112760)
chr1 (255-338)||(48119628-48119711)
chr1 (255-337)||(750323-750405)
chr1 (255-338)||(23989540-23989624)
chr1 (254-338)||(37814777-37814861)
chr1 (255-338)||(35003294-35003377)
chr1 (255-338)||(38113212-38113295)
chr1 (255-338)||(38335918-38336001)
chr1 (255-338)||(41065153-41065236)
chr1 (254-338)||(46168382-46168466)
chr1 (255-338)||(45427762-45427845)
chr1 (255-338)||(45639749-45639832)
chr1 (255-312)||(14427347-14427404)
chr1 (255-336)||(26585462-26585543)
chr1 (255-307)||(51898601-51898653)
chr1 (255-322)||(35000146-35000213)
chr1 (255-338)||(45705825-45705908)
chr1 (255-288)||(4888055-4888088)
[»] scaffold0038 (1 HSPs)
scaffold0038 (256-338)||(112656-112738)
[»] chr7 (31 HSPs)
chr7 (253-338)||(42972850-42972935)
chr7 (255-338)||(5015395-5015478)
chr7 (255-338)||(24001029-24001112)
chr7 (255-338)||(42538448-42538531)
chr7 (255-338)||(35069721-35069804)
chr7 (255-338)||(5810941-5811024)
chr7 (257-338)||(4638216-4638297)
chr7 (255-338)||(9216302-9216384)
chr7 (257-338)||(43343641-43343722)
chr7 (257-338)||(44326180-44326261)
chr7 (257-338)||(44416951-44417032)
chr7 (255-338)||(27535248-27535331)
chr7 (255-338)||(41861674-41861759)
chr7 (257-338)||(10573751-10573832)
chr7 (257-338)||(16180374-16180454)
chr7 (258-335)||(26898422-26898499)
chr7 (278-338)||(38160596-38160656)
chr7 (264-335)||(32029837-32029908)
chr7 (255-338)||(40236919-40237002)
chr7 (255-338)||(45326020-45326103)
chr7 (256-338)||(31408650-31408732)
chr7 (253-338)||(27393277-27393361)
chr7 (255-338)||(5194248-5194331)
chr7 (255-338)||(24280613-24280696)
chr7 (255-338)||(31513287-31513370)
chr7 (255-323)||(39998408-39998476)
chr7 (255-338)||(43317443-43317526)
chr7 (255-288)||(38160661-38160694)
chr7 (255-308)||(47279744-47279797)
chr7 (255-338)||(33384870-33384954)
chr7 (255-307)||(41423812-41423864)
[»] chr8 (24 HSPs)
chr8 (253-337)||(2165981-2166065)
chr8 (255-338)||(2546996-2547079)
chr8 (255-338)||(11582766-11582849)
chr8 (255-338)||(29705362-29705445)
chr8 (255-338)||(36743500-36743583)
chr8 (257-338)||(42295197-42295278)
chr8 (256-338)||(45397317-45397399)
chr8 (257-338)||(26125637-26125718)
chr8 (257-338)||(30912579-30912660)
chr8 (257-338)||(42699259-42699340)
chr8 (255-335)||(30660762-30660842)
chr8 (255-338)||(5754903-5754986)
chr8 (255-338)||(42197452-42197535)
chr8 (257-338)||(29800967-29801048)
chr8 (255-338)||(18066735-18066818)
chr8 (263-338)||(31384672-31384747)
chr8 (257-338)||(20148762-20148843)
chr8 (255-338)||(35181516-35181599)
chr8 (255-338)||(1375542-1375625)
chr8 (255-338)||(34304788-34304871)
chr8 (257-338)||(33630010-33630091)
chr8 (255-338)||(16603643-16603726)
chr8 (255-289)||(28977146-28977180)
chr8 (255-307)||(37038609-37038661)
[»] scaffold0119 (1 HSPs)
scaffold0119 (255-338)||(685-768)
[»] scaffold0187 (2 HSPs)
scaffold0187 (255-338)||(14205-14288)
scaffold0187 (255-338)||(24533-24616)
[»] scaffold0385 (1 HSPs)
scaffold0385 (255-338)||(11251-11334)
[»] scaffold0003 (1 HSPs)
scaffold0003 (257-338)||(45736-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (255-338)||(35473-35556)


Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 32463863 - 32463613
Alignment:
Q  1 tgtgggtttgagaccaagtgaatgaagtgttgttgtatatgatggaaatggagttgccatagacagtggctgctctgtctaagaaggtgagtggggttag 100  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32463863 tgtgggtttgagaccaagtgaatgaggtattgttgtatatgattgaaatggagttgccatagacagtggctgctctttctaagaaggtgagtggggttag 32463764  T
Q  101 agatgttgaatttgcttggtttctggttaactggtccattgtatatgaatggttttttgttctggttagtacactctgcactgcactgagtcgtcacatt 200  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  32463763 agctgttgaatttgcttggtttctggttaactggtccattgtatatgaatggttttttgttctggttagtacactctgcactgcattgagtcgtcacatt 32463664  T
Q  201 taaatagtaatgagtgtaaccaacctgaagtaacattagtggtagatactc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32463663 taaatagtaatgagtgtaaccaacctgaagtaacattagtggtagatactc 32463613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 32457272 - 32457417
Alignment:
Q  1 tgtgggtttgagaccaagtgaatgaagtgttgttgtatatgatggaaatggagttgccatagacagtggctgctctgtctaagaaggtgagtggggttag 100  Q
    ||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32457272 tgtgggtttgagaccaagtgaatgaggtattgttgtatatgattgaaatggagttgccatagacagtggctgctctttctaagaaggtgagtggggttag 32457371  T
Q  101 agatgttgaatttgcttggtttctggttaactggtccattgtatat 146  Q
    ||  ||||||||||||||||||||||||||||||| ||||||||||    
T  32457372 agccgttgaatttgcttggtttctggttaactggttcattgtatat 32457417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 18033982 - 18034065
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcac 18034065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 22512305 - 22512388
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  22512305 ggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcac 22512388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 7617133 - 7617216
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||    
T  7617133 ggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcac 7617216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 2614749 - 2614666
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  2614749 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 2614666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 33801469 - 33801552
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| |||||||| |||||| ||||||||||| ||||||||||| |||||||| |||||||||||||||    
T  33801469 ggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcac 33801552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 330
Target Start/End: Complemental strand, 33855143 - 33855068
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagtt 330  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  | ||||| |||||||    
T  33855143 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagtt 33855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 41334763 - 41334680
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||| |||||  |||| ||||||| ||||||||| |||||||| |||||||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 41334680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 25915085 - 25915006
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 337  Q
    |||||||||||||||||||||||||||||||||  |||||||||||| |||||||||| ||||||| ||| ||||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattaga-atatttttgtaggttcatctca 25915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 38470579 - 38470662
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||  |||||||| |||| ||||| ||||    
T  38470579 ggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcac 38470662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 5256997 - 5257078
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 5257078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 32473494 - 32473411
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || |||||   |||||||||| |||| ||||| |||||||| |||| ||||||||||    
T  32473494 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcac 32473411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 17208074 - 17208157
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| ||||||||||||| || ||||||  ||||||||||||||| ||||  || ||||| |||| ||||||||||    
T  17208074 ggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcac 17208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 306
Target Start/End: Original strand, 15409527 - 15409579
Alignment:
Q  254 gggaaaatgttacatgaacaccctttattcctacactccattgtacaccccat 306  Q
    ||||||||||||||| ||||||||||||||  | || || |||||||||||||    
T  15409527 gggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccat 15409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 23285 - 23139
Alignment:
Q  3 tgggtttgagaccaagtgaatgaagtgttgttgtatatgatggaaatggagttgccatagacagtggctgctctgtctaagaaggtgagtggggttagag 102  Q
    ||||||||| |||| |||||||||||| ||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23285 tgggtttgaaaccatgtgaatgaagtgctgttgtatatgattgatatggagttgccatagacagtagctgctctgtctaagaaggtgagtggggttagag 23186  T
Q  103 atgttgaatttgcttggtttctggttaactggtccattgtatatgaa 149  Q
     ||| || ||||||||||||||||||| ||||| |||||||||||||    
T  23185 gtgtcgagtttgcttggtttctggttatctggttcattgtatatgaa 23139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 1e-32; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 1771366 - 1771283
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcac 1771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 255 - 335
Target Start/End: Original strand, 12496956 - 12497036
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 335  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  12496956 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 12497036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 254 - 335
Target Start/End: Original strand, 27550308 - 27550389
Alignment:
Q  254 gggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 335  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||| ||||||||||||    
T  27550308 gggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 27550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 43514784 - 43514703
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||| | |||||| |||||||||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcac 43514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 25051693 - 25051776
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||| |||||||||| |||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcac 25051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 27864564 - 27864647
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  27864564 ggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 27864647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 28982922 - 28982839
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| |||||| | |||||||| ||||| |||||| |||||||| |||||||||||||||    
T  28982922 ggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcac 28982839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 33703141 - 33703224
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| |||||    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  33703141 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 33703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 55966446 - 55966363
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||||||||||| ||||  |||||||||| |||||||||||| |||||||| |||||||||||||||    
T  55966446 ggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcac 55966363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 23035980 - 23036063
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||  ||||||||||||||| | ||||||||||| || |||||| |||||||| |||||||||||||||    
T  23035980 ggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcac 23036063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 35017733 - 35017815
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||| |   |||||||||||||||||| ||| |||||||| |||||||||||||||    
T  35017733 ggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcac 35017815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 48463550 - 48463467
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||| ||||||| |||| | ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  48463550 ggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcac 48463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 27316813 - 27316731
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 337  Q
    ||||||||||| | |||||||||||||||||||||  |||| ||||||||||||||||  |||||||| ||||||||||||||    
T  27316813 ggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctca 27316731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 43949900 - 43949818
Alignment:
Q  257 aaaatgttacatgaacacccttt-attcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||| |||||||||||||||| |||||| |||  |||||||||||||||||||||| |||||||| |||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 27893940 - 27893859
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 27893859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 258 - 338
Target Start/End: Complemental strand, 23204875 - 23204795
Alignment:
Q  258 aaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||| |||||||||||||  |||||||||| || ||||||||| |||||||| |||||||||| ||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcac 23204795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 55272476 - 55272393
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| |||||| || ||||||| ||||||||||||||| ||||  |||||||| |||| ||||||||||    
T  55272476 ggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 55272393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 39631102 - 39631184
Alignment:
Q  257 aaaatgttacatgaacacccttt-attcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||| ||||||||| |||||| ||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 39631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 31680904 - 31680985
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||| | |||||| ||||||| |||| ||||||||||||||| | |||||| |||||||| |||||||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcac 31680985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 711960 - 712043
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||| ||| ||||  |||||||| |||| ||||||||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcac 712043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 17619252 - 17619169
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| |||| || ||||| | ||||||||||||||| ||||  |||||||| |||| ||||||||||    
T  17619252 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 17619169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 21687006 - 21687088
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 337  Q
    ||||||||||||||||||| ||||||||  ||||| ||||| |||| |  |||||||||| ||||||| ||||||||||||||    
T  21687006 ggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctca 21687088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 28988473 - 28988555
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 337  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||| | ||| || |||||  ||| |||||||||    
T  28988473 ggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctca 28988555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 41878407 - 41878489
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| |||||||| |||||  |||||||||||| ||  ||||| ||||||||  ||||||||||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcac 41878489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 3756344 - 3756263
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||  |||||||| |||| || |||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcac 3756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 35037007 - 35037088
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||||||  | ||||||| ||||||||||||||| ||||  |||||||| |||| ||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 35037088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 43735744 - 43735825
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||| ||||||||||| ||||||||||||||   |||| ||||  ||||||||||||||||||||  ||||||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcac 43735825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 960970 - 960890
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 335  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||| ||  ||||| || ||||| |||| |||||||    
T  960970 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 32728357 - 32728440
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| |||||| || ||||| | ||||||||||||||| ||||  || ||||| |||| ||||||||||    
T  32728357 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcac 32728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 46827806 - 46827749
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtatta 312  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||| ||| ||||    
T  46827806 ggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcatta 46827749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 306
Target Start/End: Original strand, 30189273 - 30189324
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccat 306  Q
    ||||||||||||||||||||| |||||||  ||||||||| |||||||||||    
T  30189273 ggaaaatgttacatgaacaccatttattcacacactccatcgtacaccccat 30189324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 45490413 - 45490330
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||  ||||||  ||||  | |||||||||| |||||||||| |||| ||| |||| ||||||||||    
T  45490413 ggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcac 45490330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 51512323 - 51512285
Alignment:
Q  297 tacaccccatgtattagagatattttcgtaagttcatct 335  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  51512323 tacaccccatgtattagagatattttggtaagttcatct 51512285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 250 - 307
Target Start/End: Original strand, 50526084 - 50526141
Alignment:
Q  250 tcatgggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 307  Q
    |||| |||||||||||||| ||||||||||||| ||| || || ||||||||||||||    
T  50526084 tcataggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 50526141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 322
Target Start/End: Original strand, 41847971 - 41848038
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatatttt 322  Q
    ||||||||||||| ||||| ||||| |||  ||||  |||||||||||||||| |||||||| |||||    
T  41847971 ggaaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacatttt 41848038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 48435679 - 48435596
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||| ||||||||||||||| |||| ||  |||| | ||||||||||||||| ||||| || || || |||| ||||||||||    
T  48435679 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 48435596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 313
Target Start/End: Original strand, 54473455 - 54473509
Alignment:
Q  259 aatgttacatgaacaccctttattcctacactccattgtacaccccatgtattag 313  Q
    |||| ||||||||||||||||||||| | || || |||||||| |||||||||||    
T  54473455 aatgatacatgaacaccctttattcccatacacccttgtacactccatgtattag 54473509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 1e-32; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 54246248 - 54246165
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcac 54246165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 24688502 - 24688419
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  24688502 ggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcac 24688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 42100688 - 42100771
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||||    
T  42100688 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 42100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 42394518 - 42394436
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 42394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 25413681 - 25413764
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||| |||||||| |||||||||||||||    
T  25413681 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcac 25413764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 40808865 - 40808948
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  40808865 ggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcac 40808948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 46941053 - 46941136
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||||||| |||||||| |||||||||||||||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcac 46941136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 54237097 - 54237179
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 54237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 45127028 - 45126945
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||||||||||| ||||  ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  45127028 ggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 45126945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 47191125 - 47191043
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||  ||||||||||||||    
T  47191125 ggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcac 47191043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 53581956 - 53581875
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||| |||||||| |||||||||||||||| || ||||||||| ||||||||  ||||||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcac 53581875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 4190365 - 4190282
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||  |||||||||||||||||| |||| ||||||||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcac 4190282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 9434124 - 9434207
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  9434124 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 9434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 36150130 - 36150213
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||| ||||||||||| ||||| ||||| ||||||| |||||| || |||||||| |||||||||||||||    
T  36150130 ggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcac 36150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 40480750 - 40480832
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| ||  | |||||||||| || ||||||||| |||||||| |||||||||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcac 40480832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 53273784 - 53273701
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||| ||||||| | |||||||||| ||  ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  53273784 ggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 53273701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 1078229 - 1078309
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||  ||||||||| |||||||| ||| |||||||||||    
T  1078229 aaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtattag-gatatttttgtaggttcatctcac 1078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 27748565 - 27748646
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| ||||||| |||||  |||| ||||||  ||||||||| |||||||| |||||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcac 27748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 10457992 - 10457909
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| |||| || ||||| | ||||||||||||||| ||||  |||||||| |||| || |||||||    
T  10457992 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcac 10457909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 25996268 - 25996351
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||    |||||||||||||| |||||  || ||||| |||| ||||||||||    
T  25996268 ggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcac 25996351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 259 - 338
Target Start/End: Complemental strand, 29558330 - 29558251
Alignment:
Q  259 aatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||| ||||||||||||||||| ||||   |||||||||||| || ||||||  |||| || |||| ||||||||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcac 29558251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 34791829 - 34791912
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || |||||   |||||| ||| |||| ||||| || |||||  ||| ||||||||||    
T  34791829 ggaaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcac 34791912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 51757593 - 51757676
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||| |||||| ||||||||||| || ||||| | |||||||||| |||| ||||  || ||||| |||| ||||||||||    
T  51757593 ggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcac 51757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 52628077 - 52627994
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| ||||||||||||| || ||||  | |||||||||| |||| ||||   ||||||| |||| ||||||||||    
T  52628077 ggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcac 52627994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 23521 - 23441
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 335  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  23521 ggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 23441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 3e-30; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 7273435 - 7273352
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||||||| |||||||||||||||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcac 7273352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 9698433 - 9698350
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 9698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 26670109 - 26670026
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 26670026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 26466799 - 26466882
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||| | |||||| |||||||||||||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcac 26466882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 24204085 - 24204004
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||||| |||||||| |||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcac 24204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 30735984 - 30736065
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||| |||||||||| |||||||| |||||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcac 30736065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 13743321 - 13743238
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| ||||||| ||||  | ||||||||||||||||||||| |||||||| |||||||||||||||    
T  13743321 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 13748821 - 13748738
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| ||||||| ||||  | ||||||||||||||||||||| |||||||| |||||||||||||||    
T  13748821 ggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 21279929 - 21280012
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| ||||| ||||||| ||| |||||||||||| |||||||| |||| ||||||||||    
T  21279929 ggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcac 21280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 30014343 - 30014426
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||| ||||||||||||  ||||||| |||||||||||||||    
T  30014343 ggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcac 30014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 7292747 - 7292830
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||| ||||||| ||||||| |||||  |||| ||||||| ||||||||| |||||||| |||||||||||||||    
T  7292747 ggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 7292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 7367549 - 7367632
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||| ||||||| | ||||||| |||||  ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  7367549 ggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 7367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 3213400 - 3213483
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||||||||||| ||||   |||||||||||||||||||||  |||||||| |||| ||||| ||||    
T  3213400 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 3213483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 21293777 - 21293694
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||||||||||| |||| | || ||||||||||||||||||  |||||||| |||| ||||| ||||    
T  21293777 ggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcac 21293694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 27441544 - 27441625
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||| || ||||| | |||||||| || ||||||||  |||||||| |||| ||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 27441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 33242403 - 33242486
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| |||| || |||||   ||||||||||||||||||||  || ||||| |||| ||||||||||    
T  33242403 ggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcac 33242486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 31109322 - 31109255
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatatttt 322  Q
    |||||||||||||||||||||||||| || ||||  ||||| ||||||||||| | ||| ||||||||    
T  31109322 ggaaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatatttt 31109255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 33253913 - 33253996
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| |||| ||  |||| | ||||||||||||||| ||||| || || || |||| ||||||||||    
T  33253913 ggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 33253996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 3e-30; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 1750414 - 1750497
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  1750414 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 1750497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 19047158 - 19047240
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 19047240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 12302353 - 12302270
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 12302270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 16096747 - 16096830
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| || |||| |||||||    
T  16096747 ggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcac 16096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 257 - 337
Target Start/End: Complemental strand, 43490499 - 43490419
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 337  Q
    ||||||||||||||||||||||||||||||||  ||||||||||| | ||||||||| |||||||| ||||||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctca 43490419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 30838632 - 30838715
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| |||||    ||||||||||||||||||||| |||||||| |||||||||||||||    
T  30838632 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 30838715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 4764826 - 4764743
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||| ||||||||||||| | |||||||||||||||||||| | ||||||| |||| ||||||||||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcac 4764743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 43335863 - 43335780
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||| ||||||| | |||||||||||||  ||||||||| |||||||||||| |||||||| |||||||||||||||    
T  43335863 ggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 43335780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 257 - 334
Target Start/End: Original strand, 33229303 - 33229381
Alignment:
Q  257 aaaatgttacatgaacacccttt-attcctacactccattgtacaccccatgtattagagatattttcgtaagttcatc 334  Q
    |||||| |||||||||||||||| ||||||||||  |||||||||||||||||||||| |||||||| |||||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 43114557 - 43114640
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 43114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 11825752 - 11825671
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 11825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 6518566 - 6518486
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| |||| || ||||||| ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  6518566 aaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 6518486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 41282072 - 41281991
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || |||||  ||| ||||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcac 41281991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 12415560 - 12415477
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || |||||   ||||||||||||||| ||||| || ||||| |||| || |||||||    
T  12415560 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12415477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 12427620 - 12427537
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || |||||   ||||||||||||||| ||||| || ||||| |||| || |||||||    
T  12427620 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 16803968 - 16804051
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | |||||||| |||||| ||||| || |||||  ||| ||||||||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16804051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 16843250 - 16843333
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | |||||||| |||||| ||||| || |||||  ||| ||||||||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 312
Target Start/End: Complemental strand, 966934 - 966877
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtatta 312  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||    
T  966934 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcatta 966877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 8896681 - 8896600
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||  ||| |||||||||||||| ||  | |||  ||||||| |||| ||||||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcac 8896600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 18491705 - 18491788
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | |||||||||| |||| ||||   | ||||| |||| ||||||||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcac 18491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Complemental strand, 34817875 - 34817824
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 307  Q
    ||||||||||||||||||||||||||||  ||||  ||||||||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatg 34817824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 294
Target Start/End: Complemental strand, 42849946 - 42849907
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccat 294  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  42849946 ggaaaatgttacatgaacaccctttattcctacaccccat 42849907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 337
Target Start/End: Original strand, 14285676 - 14285758
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 337  Q
    ||||||| |||||  ||||||||||| || ||||| | ||||||||||| || ||||| ||||||||| |||| |||||||||    
T  14285676 ggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctca 14285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 42026767 - 42026852
Alignment:
Q  255 ggaaaatgttacatgaacaccc--tttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||  ||||||| |||| ||||||||||| |||  | ||||| |||||||| | || ||||||||||    
T  42026767 ggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcac 42026852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 4299518 - 4299437
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||| |||||||||||||| || ||||| | ||||||||| ||||| ||||  || ||||| |||| ||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcac 4299437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 13780835 - 13780752
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||  |||||||  ||||  |||||||||||||||  ||||| ||||||||  ||| ||||||||||    
T  13780835 ggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcac 13780752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 34895841 - 34895758
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||| ||||||||||||||| |||| ||  |||| | ||||||||||||||| ||||| || || || |||| ||||||||||    
T  34895841 ggaaagtgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 34895758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 257 - 298
Target Start/End: Original strand, 7070418 - 7070459
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgta 298  Q
    ||||||||||||||||||||||||||| ||||  ||||||||    
T  7070418 aaaatgttacatgaacaccctttattcatacatcccattgta 7070459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 334
Target Start/End: Complemental strand, 39149354 - 39149313
Alignment:
Q  293 attgtacaccccatgtattagagatattttcgtaagttcatc 334  Q
    |||||||| || |||||||||||||||||| |||||||||||    
T  39149354 attgtacatcctatgtattagagatattttggtaagttcatc 39149313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 20700997 - 20700945
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 307  Q
    ||||||||||||||  |||||||||||||| | || || ||||||||||||||    
T  20700997 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatg 20700945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 3e-30; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 43571186 - 43571103
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||| |||||||||||||||    
T  43571186 ggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43571103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 5489776 - 5489859
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 5489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 48499062 - 48498979
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  48499062 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 48498979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 4401329 - 4401411
Alignment:
Q  257 aaaatgttacatgaacacccttt-attcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||| ||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcac 4401411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 331
Target Start/End: Complemental strand, 24769599 - 24769523
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttc 331  Q
    |||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| ||||||||    
T  24769599 ggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttc 24769523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 50448360 - 50448280
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 335  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||  ||||||||| |||||||| ||||||||||||    
T  50448360 ggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatct 50448280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 2497660 - 2497579
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||| ||||||| |||| ||||||||||||||||| |||||  |||||||| |||||||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcac 2497579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 7447828 - 7447908
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||| ||||||||||||||  |||||||||| ||||||||||| |||||||||  ||||||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctcac 7447908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 44112677 - 44112760
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  44112677 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 44112760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 48119628 - 48119711
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||  |||||||| |||| ||||||||||    
T  48119628 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 48119711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 337
Target Start/End: Complemental strand, 750405 - 750323
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 337  Q
    |||||||||||| |||||||||||  ||||||||| |||||||||||||||||||| || ||||||||  ||| |||||||||    
T  750405 ggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctca 750323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 23989624 - 23989540
Alignment:
Q  255 ggaaaatgttacatgaacaccc-tttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||| ||||||| ||||||| |||||| |||| ||||||||| |||||||| |||| || |||||||    
T  23989624 ggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcac 23989540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 37814777 - 37814861
Alignment:
Q  254 gggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||| |||||||||||||| ||||   |||||||||||||||||||||  |||||||| |||| ||||| ||||    
T  37814777 gggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 37814861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 35003294 - 35003377
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||  ||||  |||||||| |||| ||||||||||    
T  35003294 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcac 35003377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 38113295 - 38113212
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||| |||||||||||||| || ||||| | ||||||||||||||| ||||  || ||||| |||| ||||||||||    
T  38113295 ggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcac 38113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 38335918 - 38336001
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || |||||   |||||||| |||||| ||||  |||||||| |||| ||||||||||    
T  38335918 ggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcac 38336001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 41065153 - 41065236
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| |  |||||||||||||| ||||| |  ||||| |||| ||||||||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcac 41065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 254 - 338
Target Start/End: Original strand, 46168382 - 46168466
Alignment:
Q  254 gggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||| || || |  | ||||||||||| ||| ||||  |||||||| |||| ||||||||||    
T  46168382 gggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcac 46168466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 45427845 - 45427762
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||| ||| |||| || ||||| | ||||||||| ||||| ||||| || ||||| |||| ||||||||||    
T  45427845 ggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcac 45427762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 45639832 - 45639749
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||| ||||| || ||||  | ||||||||||||||  ||||  |||||||| |||| ||||||||||    
T  45639832 ggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcac 45639749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 14427347 - 14427404
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtatta 312  Q
    |||||||||||||||||||||||||| || ||||| | |||||||||| |||| ||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcatta 14427404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 336
Target Start/End: Original strand, 26585462 - 26585543
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctc 336  Q
    ||||||||||| |||||||  ||||| || ||||||  ||||||||||||||| ||||  |||||||| |||| ||||||||    
T  26585462 ggaaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctc 26585543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 307
Target Start/End: Original strand, 51898601 - 51898653
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 307  Q
    |||||||||||||| ||||||||||||| ||| || || ||||||||||||||    
T  51898601 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 51898653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 35000213 - 35000146
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatatttt 322  Q
    ||||||||||||||||||||| |||| || ||||||| |||||| ||  |||||||||| || |||||    
T  35000213 ggaaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacatttt 35000146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 45705825 - 45705908
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||| |||||||||||||| || |||| || ||||||||| ||||| ||||  || |||||  ||| ||||||||||    
T  45705825 ggaaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcac 45705908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 288
Target Start/End: Original strand, 4888055 - 4888088
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctaca 288  Q
    |||||||||||||||||| |||||||||||||||    
T  4888055 ggaaaatgttacatgaacgccctttattcctaca 4888088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 112656 - 112738
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 112738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 4e-29; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 253 - 338
Target Start/End: Original strand, 42972850 - 42972935
Alignment:
Q  253 tgggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  42972850 tgggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 42972935  T

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Target: chr7; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 5015395 - 5015478
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  5015395 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 5015478  T

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Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 24001112 - 24001029
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  24001112 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 24001029  T

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Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 42538531 - 42538448
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  42538531 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 42538448  T

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Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 35069721 - 35069804
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||| ||||||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  35069721 ggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 35069804  T

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Target: chr7; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 5811024 - 5810941
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||| || |||||| ||||||||  ||||||||||||||    
T  5811024 ggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcac 5810941  T

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Target: chr7; HSP #7
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 4638297 - 4638216
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| ||||||| ||||||| |||||||||||||| |||||  |||||||| |||||||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcac 4638216  T

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Target: chr7; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 9216302 - 9216384
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||| |  | |||||||| |||||| |||||||||||||| |||||||||||||||    
T  9216302 ggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctcac 9216384  T

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Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 43343722 - 43343641
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||| | |||||| |||||| | ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 43343641  T

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Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 44326180 - 44326261
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||||||||||| ||||  |||||||||||| ||| |||||| |||||||| |||||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 44326261  T

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Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 44417032 - 44416951
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||| | |||||| |||||| | ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 44416951  T

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Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 27535331 - 27535248
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||||| ||||||||| |||||| ||| ||| ||||| |||| ||||||||||    
T  27535331 ggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcac 27535248  T

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Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 41861674 - 41861759
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtat--tagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||| ||||| | ||| ||||||| ||||||  |||||||||||| ||||||| |||||||    
T  41861674 ggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcac 41861759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 10573751 - 10573832
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||||||||||| ||||  | |||||||||||||||||||||  ||||||| |||| ||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcac 10573832  T

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Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 16180454 - 16180374
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||| ||||||||||||| ||||||||||||||| |||||| | ||||||| |||| ||||||||||    
T  16180454 aaaatgttacatcaacaccatttattcctacac-ccattgtacaccccacgtattataaatattttggtaaattcatctcac 16180374  T

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Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 258 - 335
Target Start/End: Complemental strand, 26898499 - 26898422
Alignment:
Q  258 aaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 335  Q
    |||||||||||||||||| ||||||| ||||| | ||||||||  ||||||||||| |||||||| ||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatct 26898422  T

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Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 278 - 338
Target Start/End: Complemental strand, 38160656 - 38160596
Alignment:
Q  278 ttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||    
T  38160656 ttattcttacactccattgtacaccccatgtattagggatattttagtaacttcatctcac 38160596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 264 - 335
Target Start/End: Complemental strand, 32029908 - 32029837
Alignment:
Q  264 tacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 335  Q
    ||||| |||||  ||||||||||||| ||||||||||||||||||||||| |||||||| |||| |||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 32029837  T

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Target: chr7; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 40236919 - 40237002
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||  | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  40236919 ggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcac 40237002  T

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Target: chr7; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 45326020 - 45326103
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||| |||||||| |||||| ||||||| ||||   ||||||||||||||| |||||| |||||||| |||||||||||||||    
T  45326020 ggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcac 45326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 31408732 - 31408650
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||| || ||||||| |||||||| |||||| ||||  |||||||| |||| ||||| ||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcac 31408650  T

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Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 253 - 338
Target Start/End: Complemental strand, 27393361 - 27393277
Alignment:
Q  253 tgggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||| ||||| | |||||||||||||||||  | ||||||||| | ||||||||| |||||||| |||||||||||||||    
T  27393361 tgggaaaatgctacatca-caccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcac 27393277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 5194331 - 5194248
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| ||||||| |||||  |||||||||||| |||| |||  ||||||||  ||| ||||||||||    
T  5194331 ggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcac 5194248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 24280696 - 24280613
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||||||||||||| ||||| | ||| |||| |||||| | |||| ||||||| |||| ||||||||||    
T  24280696 ggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcac 24280613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 31513287 - 31513370
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||| ||||| || ||||| | |||||| |||||||| ||||  |||||||| |||| ||||||||||    
T  31513287 ggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcac 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 255 - 323
Target Start/End: Original strand, 39998408 - 39998476
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttc 323  Q
    ||||||||||||||||||||  |||| || ||||  | ||||||||||||||||||||| |||||||||    
T  39998408 ggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatattttc 39998476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 43317443 - 43317526
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||| || |||  |||| ||||||||  ||| ||||||||||    
T  43317443 ggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcac 43317526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 288
Target Start/End: Complemental strand, 38160694 - 38160661
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctaca 288  Q
    ||||||||||||||||||||||||||||||||||    
T  38160694 ggaaaatgttacatgaacaccctttattcctaca 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 308
Target Start/End: Complemental strand, 47279797 - 47279744
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgt 308  Q
    ||||||| |||||| || ||||||||||| ||||  ||||||||||||||||||    
T  47279797 ggaaaatattacataaataccctttattcatacatcccattgtacaccccatgt 47279744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 33384870 - 33384954
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactcc-attgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| | |||| || ||||| || |||||| || ||||| ||||| || ||||| |||| ||||||||||    
T  33384870 ggaaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcac 33384954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 41423864 - 41423812
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 307  Q
    |||||||||||||| ||||||||||||||  | || || ||||||||||||||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatg 41423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 2e-28; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 253 - 337
Target Start/End: Complemental strand, 2166065 - 2165981
Alignment:
Q  253 tgggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctca 337  Q
    ||||||||| ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  2166065 tgggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctca 2165981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 2546996 - 2547079
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||||| |||||||||||||||    
T  2546996 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcac 2547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 11582766 - 11582849
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  11582766 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 11582849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 29705362 - 29705445
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||  ||||||||||||||    
T  29705362 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcac 29705445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 36743583 - 36743500
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 36743500  T

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Target: chr8; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 42295197 - 42295278
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||  |||||||||| ||||||||||| |||||||| |||||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcac 42295278  T

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Target: chr8; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 256 - 338
Target Start/End: Original strand, 45397317 - 45397399
Alignment:
Q  256 gaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||| |||||||||||||||||||||| ||||| ||||||| ||||||||| |||||||| |||||||||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcac 45397399  T

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Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 26125637 - 26125718
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||||||||||| |||| |||||||||||||| ||||||||| |||||||| |||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 26125718  T

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Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 30912660 - 30912579
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||| |||||||||||  |||||||||| | |||||| |||||||||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcac 30912579  T

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Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 42699259 - 42699340
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||  |||||||| |||||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcac 42699340  T

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Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 255 - 335
Target Start/End: Complemental strand, 30660842 - 30660762
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatct 335  Q
    |||||||||||||||||||||||||||| |||||  ||||||||||||| ||||||||| |||||||| ||||||||||||    
T  30660842 ggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 30660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 5754903 - 5754986
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| ||||||||||||  |||||||||| ||||| |||||| |||||||| |||||||||||||||    
T  5754903 ggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcac 5754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 42197535 - 42197452
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| ||||||||||||| |||||| |||| | ||||||||| |||||||| |||||||||||||||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcac 42197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 29801048 - 29800967
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||| |||||||| |||||||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 29800967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 18066818 - 18066735
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || |||| || |||||||| |||||||||||| |||||||| |||| ||||||||||    
T  18066818 ggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcac 18066735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 263 - 338
Target Start/End: Original strand, 31384672 - 31384747
Alignment:
Q  263 ttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||||| |||| || |||||||||||||||||||||  ||||||| |||||||||||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcac 31384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 257 - 338
Target Start/End: Original strand, 20148762 - 20148843
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||| |||||||||||||| ||||  |||||||||||| ||| |||||| |||||||| |||||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 20148843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 35181516 - 35181599
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 35181599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 1375542 - 1375625
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||| ||||||||||||| ||||||| ||||| | |||||||||||||| |||||| |||||||| |||| || |||||||    
T  1375542 ggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcac 1375625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 34304788 - 34304871
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||||||| |||||| || ||||| | ||||||||||||||| ||||| || ||||| |||| ||||||||||    
T  34304788 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 34304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 33630091 - 33630010
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||| |||||||||||| || |||||  |||||||||||| ||| ||||| || ||||| |||| ||||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcac 33630010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 16603726 - 16603643
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||||||||| |||||||||| || |||||   ||| ||||||||||| |||| ||| ||||| |||| ||||||||||    
T  16603726 ggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcac 16603643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 255 - 289
Target Start/End: Original strand, 28977146 - 28977180
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacac 289  Q
    |||||||||||||||||||||||||||||||||||    
T  28977146 ggaaaatgttacatgaacaccctttattcctacac 28977180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 255 - 307
Target Start/End: Complemental strand, 37038661 - 37038609
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatg 307  Q
    |||||||||||||| ||||||||||||| ||| || || ||||||||||||||    
T  37038661 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 37038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 685 - 768
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 14288 - 14205
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||||| |||||||| |||||||||||||||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 14205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 24616 - 24533
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| || ||||||||| |||||||| |||||||||||||||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 24533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 338
Target Start/End: Original strand, 11251 - 11334
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    ||||||||| |||||||||| |||||||| ||||| |||||||||||||||| |||||| |||||||| |||||||||||||||    
T  11251 ggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcac 11334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 257 - 338
Target Start/End: Complemental strand, 45817 - 45736
Alignment:
Q  257 aaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||||||||||||| || ||||| | |||||||| || ||||||||  |||||||| |||| ||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 45736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 338
Target Start/End: Complemental strand, 35556 - 35473
Alignment:
Q  255 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccccatgtattagagatattttcgtaagttcatctcac 338  Q
    |||||||||||||| |||||| |||| || |||||   ||||||||||||||| ||||| || || || |||| ||||||||||    
T  35556 ggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcac 35473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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